Citrus Sinensis ID: 018306

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccEEEEEEcccccccHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHcccccEEEEccccccccHHHHHHccccHHHHHHHHHHcccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccEEEccccccccccccccccccHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHcccccccccHHHHccccccccccEEEEEEEcccccccHHHHHHHHccccccEEEEEEcccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHcccccHHHccccccccccEEEEccccccHHHHHcccccccccccccHHHHccccEEEEEEHHHHHHHHHHHHHHHHHHHHccccccccccHccccEEEEEccccccccEEEEEEEccccccccccccccccccHHHHHHHHccccccEEHHHHHccHHHHHHHHHHccHEEccc
Coil and Loop (DISEMBL)
MPSSPYFYSFALFISLSLLFFlygphilplkhpptshisiaddlddlslfrnatlsasssrassskvshlsfsnarPKIAFLFLtnsdlvfapvwsqffsgnerlyniyvhadpsaklsdthklfqnrfipakrterasPTLISAARRLMANAILDDPLNLYFALVsqsciplhsfRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGqyvmlpevpfekfrvGSQFFILAKRHALLVLKDRKLwkkfklpclnihscypeehyfptllsmkdpegcshytltrvnwtdsvdghphtydtgeisPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Flexible Loop (DISEMBL)
MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLsasssrassskvshLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNrfipakrterasPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFArkfspdcikPLMKIASKVIFRD
Low Complexity Region (SEG)
MPSSPyfysfalfislsllfflyGPHILPLKHPPTSHISIAddlddlslFRNATLsasssrassskvshlsFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Disordered region (IsUnstruct)
*****YFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLF************************ARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAK******PTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIF**
Disordered Region (DISOPRED)
***SPYFYSFALFISLSLLFFLYGPHILPLKHP*****SIADDLDDLSLFRNA*************************IAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Disordered Region (DISEMBL)
MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNAT*****************FSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Disordered Region (DISPRO)
**SSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
224110104	343	predicted protein [Populus trichocarpa]	0.896	0.935	0.643	1e-125
225462434	362	PREDICTED: uncharacterized protein LOC10	0.986	0.975	0.615	1e-123
224100595	281	predicted protein [Populus trichocarpa]	0.782	0.996	0.719	1e-120
297819916	344	hypothetical protein ARALYDRAFT_485566 [	0.857	0.892	0.626	1e-113
15231121	346	Core-2/I-branching beta-1,6-N-acetylgluc	0.882	0.913	0.614	1e-113
388514855	345	unknown [Medicago truncatula]	0.960	0.997	0.593	1e-111
224054444	372	predicted protein [Populus trichocarpa]	0.994	0.956	0.574	1e-111
30688302	362	Core-2/I-branching beta-1,6-N-acetylgluc	0.949	0.939	0.577	1e-110
255545327	378	conserved hypothetical protein [Ricinus	0.905	0.857	0.590	1e-109
356550058	365	PREDICTED: uncharacterized protein LOC10	0.997	0.978	0.573	1e-108

>gi|224110104|ref|XP_002315417.1| predicted protein [Populus trichocarpa] gi|222864457|gb|EEF01588.1| predicted protein [Populus trichocarpa]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/337 (64%), Positives = 268/337 (79%), Gaps = 16/337 (4%)

Query: 23  YGPHIL-PLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAF 81
           + P IL PL++      +++ +LDD +LF+ A     +       +  L+ +N  PKIAF
Sbjct: 22  FTPQILVPLQN------ALSYELDDPTLFKKALKPCKT-------IPPLATNNPTPKIAF 68

Query: 82  LFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASPT 141
           LFLTNSDL FAP+W +FF G   LYNIYVHADP +K+S+   +F+NRFIP K+TER SP+
Sbjct: 69  LFLTNSDLSFAPLWERFFEGYNNLYNIYVHADPFSKVSNPDGIFKNRFIPGKKTERGSPS 128

Query: 142 LISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHK 201
           LI A +RL+A AILDDPLNLYFALVSQ C+PLHSF++++ +LFG++I  L  F+TQS+H+
Sbjct: 129 LILAEKRLLARAILDDPLNLYFALVSQHCVPLHSFQYIHDTLFGHNI--LKTFTTQSRHQ 186

Query: 202 SFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKF 261
           SFIEILS DPNL +RY ARG+ +MLPE+P+EKFRVGSQFF+LAKRHALLVLKDRKLW+KF
Sbjct: 187 SFIEILSEDPNLPDRYNARGENIMLPEIPYEKFRVGSQFFVLAKRHALLVLKDRKLWRKF 246

Query: 262 KLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALI 321
           KLPCLN  SCYPEEHYFPTLLSMK+P GCSHYTLT VNWTD  DGHPH Y   E+SP L+
Sbjct: 247 KLPCLNTESCYPEEHYFPTLLSMKNPRGCSHYTLTNVNWTDCFDGHPHLYQAEEVSPNLV 306

Query: 322 HTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
           H LRQSNS YSYFFARKF+PDC++PLM++A  VIF+D
Sbjct: 307 HGLRQSNSSYSYFFARKFAPDCLQPLMEMADDVIFKD 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462434|ref|XP_002264354.1| PREDICTED: uncharacterized protein LOC100241929 [Vitis vinifera]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/367 (61%), Positives = 277/367 (75%), Gaps = 14/367 (3%)

Query: 1   MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSS 60
           M SSP+  S  L +S+ +LF L  P ILP +  P   I ++D++DDL+LFR A    S+ 
Sbjct: 1   MVSSPFAISSVLLLSIPVLFLL-APRILPPRQIP---IPLSDEVDDLALFRRAAALDSAH 56

Query: 61  RASS--SKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKL 118
            AS+  S  +HL  +N + KIAFLFLTNSDL FAP+W QFF GNE LYNIYVHADP+ ++
Sbjct: 57  SASNLPSSFTHLGATNPKLKIAFLFLTNSDLHFAPLWEQFFRGNEDLYNIYVHADPTVQV 116

Query: 119 SDTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRF 178
           +    +F++RFI AK+T+RASP LISAARRL+A A+LDDP N +FA++SQ C+PLHSFRF
Sbjct: 117 AHPAGVFEDRFIAAKKTQRASPMLISAARRLLATALLDDPYNAFFAILSQHCVPLHSFRF 176

Query: 179 VYRSLFGNSIRVLNAFSTQS-------KHKSFIEILSRDPNLAERYAARGQYVMLPEVPF 231
           V+ +LF    RV +A S +S       ++ SFIEILS   +L +RY ARG+Y MLPEVPF
Sbjct: 177 VHHALFAPP-RVKSALSVESTRLPVRLRYSSFIEILSNSSSLWKRYTARGRYAMLPEVPF 235

Query: 232 EKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCS 291
            KFRVGSQFF+L +RHAL+V+KDR+LWKKFKLPCL   SCYPEEHYFPTLLSM DP GC+
Sbjct: 236 SKFRVGSQFFVLTRRHALVVVKDRQLWKKFKLPCLRSDSCYPEEHYFPTLLSMTDPNGCT 295

Query: 292 HYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIA 351
           HYTLTRVNWT S  GHPHTY + EIS  LI+ LRQSNS YSY FARKF+PDC++PLM IA
Sbjct: 296 HYTLTRVNWTGSTHGHPHTYRSAEISAELIYRLRQSNSNYSYLFARKFTPDCLQPLMNIA 355

Query: 352 SKVIFRD 358
             VIFRD
Sbjct: 356 GTVIFRD 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100595|ref|XP_002311939.1| predicted protein [Populus trichocarpa] gi|222851759|gb|EEE89306.1| predicted protein [Populus trichocarpa]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 238/282 (84%), Gaps = 2/282 (0%)

Query: 77  PKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTE 136
           PKIAFLFLTNSDL FAP+W +FF G   LYNIYVHADP +K+S+   +F+++FIP K+TE
Sbjct: 2   PKIAFLFLTNSDLSFAPLWERFFRGYSNLYNIYVHADPFSKVSNPDGIFKDQFIPGKKTE 61

Query: 137 RASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFST 196
           R SP+LISA +RL+A AILDDP NLYFALVSQ C+PLHSF+++Y +LFG++I  L AF+ 
Sbjct: 62  RGSPSLISAEKRLLARAILDDPFNLYFALVSQHCVPLHSFQYMYNTLFGHNI--LEAFAA 119

Query: 197 QSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRK 256
           QS H+SFIEILS+DPNL +RY ARG+ +MLPE+PFEKFRVGSQFF+LAKRHA LVLKDRK
Sbjct: 120 QSHHQSFIEILSQDPNLPDRYNARGENIMLPEIPFEKFRVGSQFFVLAKRHAFLVLKDRK 179

Query: 257 LWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEI 316
           LW+KFKLPCLNI SCYPEEHYFPTLLSMKDP GCS YTLT VNWTD  D HPH Y   E+
Sbjct: 180 LWRKFKLPCLNIESCYPEEHYFPTLLSMKDPRGCSQYTLTNVNWTDCFDAHPHLYQAEEV 239

Query: 317 SPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
           SP L+H LR SNS  SYFFARKF+PDC+KPLM+IA  VIF+D
Sbjct: 240 SPNLVHRLRLSNSSDSYFFARKFAPDCLKPLMEIADDVIFKD 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819916|ref|XP_002877841.1| hypothetical protein ARALYDRAFT_485566 [Arabidopsis lyrata subsp. lyrata] gi|297323679|gb|EFH54100.1| hypothetical protein ARALYDRAFT_485566 [Arabidopsis lyrata subsp. lyrata]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/324 (62%), Positives = 249/324 (76%), Gaps = 17/324 (5%)

Query: 38  ISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQ 97
           IS ADDLDDLSLF  A +S+S++      +S     N  PKIAFLFLTNSDL F P+W  
Sbjct: 35  ISTADDLDDLSLFHRAAVSSSTNNRRLISLS----PNPPPKIAFLFLTNSDLTFLPLWKS 90

Query: 98  FFSGNERLYNIYVHADPSAKLS---DTHKLFQNRFIPAKRTERASPTLISAARRLMANAI 154
           FF G++ LYN+Y+HADP++ +S   D+  +   +FIPAKRT RASPTLISA RRL+ANAI
Sbjct: 91  FFQGHQDLYNVYIHADPTSSVSPLLDSSSI-NAKFIPAKRTARASPTLISAERRLLANAI 149

Query: 155 LDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLA 214
           LDDP NLYFAL+SQ CIPLHSF +++  LF          +    H+SFIEILS +P L 
Sbjct: 150 LDDPNNLYFALISQHCIPLHSFSYIHNHLFS---------TNSDHHQSFIEILSDEPFLP 200

Query: 215 ERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPE 274
           +RY ARG   MLPE+ ++ FRVGSQFF+LAKRHAL+V+K+RKLW+KFKLPCL++ SCYPE
Sbjct: 201 KRYNARGDDAMLPEIRYQDFRVGSQFFVLAKRHALMVIKERKLWRKFKLPCLDVESCYPE 260

Query: 275 EHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYF 334
           EHYFPTLLS++DPEGCSH+TLTRVNWT SV GHPHTYD  E+SP LIH+LR+SNS   Y 
Sbjct: 261 EHYFPTLLSLEDPEGCSHFTLTRVNWTGSVGGHPHTYDASEVSPQLIHSLRRSNSSLDYV 320

Query: 335 FARKFSPDCIKPLMKIASKVIFRD 358
           FARKF+P+ ++PLM+IA  VIFRD
Sbjct: 321 FARKFTPESLQPLMEIADTVIFRD 344

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231121|ref|NP_190774.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|30693578|ref|NP_850681.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|13430782|gb|AAK26013.1|AF360303_1 unknown protein [Arabidopsis thaliana] gi|13877703|gb|AAK43929.1|AF370610_1 putative protein [Arabidopsis thaliana] gi|4678935|emb|CAB41326.1| putative protein [Arabidopsis thaliana] gi|15293267|gb|AAK93744.1| unknown protein [Arabidopsis thaliana] gi|27311805|gb|AAO00868.1| Unknown protein [Arabidopsis thaliana] gi|30984572|gb|AAP42749.1| At3g52060 [Arabidopsis thaliana] gi|110737340|dbj|BAF00615.1| hypothetical protein [Arabidopsis thaliana] gi|332645363|gb|AEE78884.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|332645364|gb|AEE78885.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/337 (61%), Positives = 259/337 (76%), Gaps = 21/337 (6%)

Query: 25  PHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPKIAFLFL 84
           PHIL      ++ IS ADDLDDLSLF  A +S+S++  ++ ++  LS  N  PKIAFLFL
Sbjct: 28  PHILLSS---STLISTADDLDDLSLFHRAVVSSSTN--NNRRLISLS-PNPPPKIAFLFL 81

Query: 85  TNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLS---DTHKLFQNRFIPAKRTERASPT 141
           TNSDL F P+W  FF G++ LYN+Y+HADP++ +S   D+  +   +FIPA+RT RASPT
Sbjct: 82  TNSDLTFLPLWESFFQGHQDLYNVYIHADPTSSVSPLLDSSSI-NAKFIPARRTARASPT 140

Query: 142 LISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHK 201
           LISA RRL+ANAILDDP NLYFAL+SQ CIPLHSF +++  LF +              +
Sbjct: 141 LISAERRLLANAILDDPNNLYFALISQHCIPLHSFSYIHNHLFSDH-----------HQQ 189

Query: 202 SFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKF 261
           SFIEILS +P L +RY ARG   MLPE+ ++ FRVGSQFF+LAKRHAL+V+K+RKLW+KF
Sbjct: 190 SFIEILSDEPFLLKRYNARGDDAMLPEIQYQDFRVGSQFFVLAKRHALMVIKERKLWRKF 249

Query: 262 KLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALI 321
           KLPCL++ SCYPEEHYFPTLLS++DP+GCSH+TLTRVNWT SV GHPHTYD  EISP LI
Sbjct: 250 KLPCLDVESCYPEEHYFPTLLSLEDPQGCSHFTLTRVNWTGSVGGHPHTYDASEISPQLI 309

Query: 322 HTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
           H+LR+SNS   YFFARKF+P+ ++PLM+IA  VIFRD
Sbjct: 310 HSLRRSNSSLDYFFARKFTPESLQPLMEIADAVIFRD 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514855|gb|AFK45489.1| unknown [Medicago truncatula]

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/359 (59%), Positives = 258/359 (71%), Gaps = 15/359 (4%)

Query: 1   MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSS 60
           M SSP   S AL ISL L+ FL    +LP    P S      D DDL+LF  AT   ++ 
Sbjct: 1   MLSSPILVSLALLISLPLVLFL-SQQLLPQFTFPFS-----PDADDLALFHRATTHTTTH 54

Query: 61  RASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSD 120
            ++ +        N +PKIAFLFLTN++L FAP+W +FF+GN  L+NIY+HADP+  +  
Sbjct: 55  LSTLT--------NPKPKIAFLFLTNTNLTFAPLWEKFFTGNNHLFNIYIHADPTTSVVS 106

Query: 121 THKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVY 180
              +F NRFI +K T+RASP+LISAARRL+A+A+LDDPLN YFALVSQ C+PL SFRFVY
Sbjct: 107 PGGVFHNRFISSKPTQRASPSLISAARRLLASALLDDPLNQYFALVSQHCVPLLSFRFVY 166

Query: 181 RSLFGNSIRVLNAFST-QSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQ 239
             LF N +  L +FS     + SFIEILS DPNL ERY A G+ VMLPEVPFE FRVGSQ
Sbjct: 167 NYLFKNQLMSLASFSDFNLLYPSFIEILSEDPNLYERYNAHGENVMLPEVPFEDFRVGSQ 226

Query: 240 FFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVN 299
           FFIL ++HA +V++D KLWKKF++PC+N+ SCYPEEHYFPTLLSM+D  GC+ +TLTRVN
Sbjct: 227 FFILNRKHAKVVVRDYKLWKKFRIPCVNLDSCYPEEHYFPTLLSMEDLNGCTGFTLTRVN 286

Query: 300 WTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
           WT   DGHPH Y   E+SP LI  LR SNS YSY FARKFSP+C+ PLM IA  VIFRD
Sbjct: 287 WTGCWDGHPHLYTPEEVSPELIRQLRVSNSSYSYLFARKFSPECLAPLMDIADDVIFRD 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054444|ref|XP_002298263.1| predicted protein [Populus trichocarpa] gi|222845521|gb|EEE83068.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/374 (57%), Positives = 274/374 (73%), Gaps = 18/374 (4%)

Query: 1   MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSS 60
           M S+ +   F+LF+SL +LF L  P I P  H P+  IS +D+LDD  LFR A  SAS+S
Sbjct: 1   MFSTQFVIIFSLFLSLPILFLL-APRIFP-SHNPSIPISPSDELDDFVLFRKAIASASAS 58

Query: 61  RASS-----SKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFF-SGNERLYNIYVHADP 114
            ++S     S  SHL+  + + KIAFLFLTN+DL FAP+W QFF S ++ L+NIYVHADP
Sbjct: 59  TSASATRYPSAHSHLTSKSKKLKIAFLFLTNTDLFFAPLWEQFFKSADKNLFNIYVHADP 118

Query: 115 SAKLSDTHKLFQNRFIP-AKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPL 173
            + ++    +F ++FIP AKRT RASPTLISA RRL+ANAILDDP N +FA++SQ CIPL
Sbjct: 119 HSNVTKPTGIFFSQFIPDAKRTYRASPTLISATRRLLANAILDDPTNTFFAVLSQYCIPL 178

Query: 174 HSFRFVYRSLFGNSIRVLNA---------FSTQSKHKSFIEILSRDPNLAERYAARGQYV 224
           HSF++VY SL  +    L++         ++ + ++KSFIEI+S+D  L +RY +RG+Y 
Sbjct: 179 HSFKYVYNSLISSKSFDLSSPESDPESTQYNMKIQYKSFIEIISKDRRLWKRYVSRGKYA 238

Query: 225 MLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSM 284
           M+PEVPFEKFR GSQFF+L +RHAL+V++DR+LW KFKLPC     CYPEEHYFPTLLSM
Sbjct: 239 MMPEVPFEKFRAGSQFFVLTRRHALMVIEDRRLWNKFKLPCYREDECYPEEHYFPTLLSM 298

Query: 285 KDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCI 344
           +DP+GC+ YTLT+VNWT + +GHP+TY   EISP LI  LRQSN   SY FARKF P C+
Sbjct: 299 QDPDGCTKYTLTKVNWTGTRNGHPYTYKAAEISPVLIQELRQSNYSSSYLFARKFEPICL 358

Query: 345 KPLMKIASKVIFRD 358
            PLMKIA KVIFRD
Sbjct: 359 NPLMKIADKVIFRD 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688302|ref|NP_680193.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|13374866|emb|CAC34500.1| putative protein [Arabidopsis thaliana] gi|22531074|gb|AAM97041.1| unknown protein [Arabidopsis thaliana] gi|23197924|gb|AAN15489.1| unknown protein [Arabidopsis thaliana] gi|26452044|dbj|BAC43112.1| unknown protein [Arabidopsis thaliana] gi|110736125|dbj|BAF00034.1| hypothetical protein [Arabidopsis thaliana] gi|332005595|gb|AED92978.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/362 (57%), Positives = 257/362 (70%), Gaps = 22/362 (6%)

Query: 10  FALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSH 69
           F+L + L  +FF   PH+ P   P  S I I+D++DD SLF  A        A S+ +SH
Sbjct: 10  FSLLLCLPFVFFFVAPHVFP-SPPGESLIPISDEIDDRSLFIAA--------AGSTSLSH 60

Query: 70  LSFSNARPK--IAFLFLTNSDLVFAPVWSQFFSGNER-LYNIYVHADPSAKLS--DTHKL 124
           LS  N  PK  IAFLFLTNSDL FAP+W +FFSG+ + LYN+YVHADP   ++      +
Sbjct: 61  LSSGNPNPKLKIAFLFLTNSDLHFAPIWDRFFSGHSKSLYNVYVHADPFVNVTRPGNGSV 120

Query: 125 FQNRFIP-AKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSL 183
           F+N FI  AKRT RASPTLISA RRL+A A LDDP N YFA++SQ CIPLHSF +VY SL
Sbjct: 121 FENAFIANAKRTARASPTLISATRRLLATAFLDDPANTYFAVLSQYCIPLHSFNYVYSSL 180

Query: 184 FGNSI-------RVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRV 236
           F +SI          N    +  ++SF+E++S +P L +RY ARG+Y M+PEVPFEKFRV
Sbjct: 181 FESSIFDKSDPDPNPNPRGIRILYRSFMELISDEPRLWKRYTARGRYAMMPEVPFEKFRV 240

Query: 237 GSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLT 296
           GSQFF++ +RHALL +KDR LW+KFKLPC     CYPEEHYFPTLL+MKDP+GC+ YTLT
Sbjct: 241 GSQFFVMTRRHALLTIKDRILWRKFKLPCYRSDECYPEEHYFPTLLNMKDPDGCTGYTLT 300

Query: 297 RVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIF 356
           RVNWT +V GHP+TY   E+ P LI  LR+SN   SYFFARKF+PDC+KPL+ IA  VIF
Sbjct: 301 RVNWTGTVKGHPYTYKPKEVVPELIQRLRRSNHSSSYFFARKFTPDCLKPLLAIADSVIF 360

Query: 357 RD 358
           RD
Sbjct: 361 RD 362

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545327|ref|XP_002513724.1| conserved hypothetical protein [Ricinus communis] gi|223547175|gb|EEF48671.1| conserved hypothetical protein [Ricinus communis]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/347 (59%), Positives = 252/347 (72%), Gaps = 23/347 (6%)

Query: 24  GPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSSRASSSKVSHLSFSNARPK--IAF 81
            P ILP + P    IS +D+ DDLSLFR A        AS+        S+ +PK  IAF
Sbjct: 43  APRILPPRLP---SISPSDEQDDLSLFRKA--------ASNPSSFSHLSSSRKPKLKIAF 91

Query: 82  LFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIP-AKRTERASP 140
           LFLTNSDL FAP+W +FF  +E LYNIYVHADPS  ++    +F+   +  AKRT RASP
Sbjct: 92  LFLTNSDLYFAPLWDKFFKSHEHLYNIYVHADPSVNITRPAGVFKTHLMSNAKRTYRASP 151

Query: 141 TLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSL-FGNSIRVLNA------ 193
           TL+SA RRL+A AILDDP N++FA+VSQ CIPLHSF +VY SL F NS  + ++      
Sbjct: 152 TLVSATRRLLATAILDDPANIFFAVVSQYCIPLHSFNYVYNSLVFSNSFDLTSSDSDPES 211

Query: 194 --FSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLV 251
             +  + ++KSFIE++S++P L +RY ARG+Y ++PEVPFEKFRVGSQFF+L +RHAL+V
Sbjct: 212 TQYGVRVQYKSFIEVISKEPRLWKRYIARGRYSLMPEVPFEKFRVGSQFFVLTRRHALMV 271

Query: 252 LKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTY 311
           +KD  LWKKFK PC     CYPEEHYFPTLLSM DP+GC+HYTLTRVNWT + +GHP+TY
Sbjct: 272 IKDVNLWKKFKKPCYRADECYPEEHYFPTLLSMADPKGCTHYTLTRVNWTGTTNGHPYTY 331

Query: 312 DTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
              EISPALI  LR+SN   SY FARKFSPDC++PLMKIA KVIFRD
Sbjct: 332 RPSEISPALIRDLRKSNYSSSYLFARKFSPDCLRPLMKIADKVIFRD 378

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550058|ref|XP_003543407.1| PREDICTED: uncharacterized protein LOC100819878 [Glycine max]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/366 (57%), Positives = 266/366 (72%), Gaps = 9/366 (2%)

Query: 1   MPSSPYFYSFALFISLSLLFFLYGPHILPLKHPPTSHISIADDLDDLSLFRNATLSASSS 60
           M SSP+  +F+L +SL +LFFL  P ILP K      IS +D+LDD++LF  A   +S+S
Sbjct: 1   MFSSPFVLTFSLLLSLPILFFL-APRILPPKPHSFPPISPSDELDDINLFNRAISHSSNS 59

Query: 61  RASSSKVSHLSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGN-ERLYNIYVHADPSAKLS 119
            ++ SK  HLS  N   KIAFLFLTN+DL F+P+W  FFS +   L+NIY+H+DPS  L+
Sbjct: 60  HSNPSKFFHLSSKNPSLKIAFLFLTNTDLHFSPLWDLFFSSSPSHLFNIYIHSDPSFNLT 119

Query: 120 -DTHKLFQNRFIPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRF 178
                LF+N+FI +K T R+SPTLISA RRL+A+A+LDDP N YFAL+SQ CIPLHSF++
Sbjct: 120 LPLSPLFRNKFISSKPTFRSSPTLISATRRLLASALLDDPSNAYFALLSQHCIPLHSFKY 179

Query: 179 VYRSLF------GNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFE 232
            Y SLF        +    + F  + K+KSF+EILS  P L  RY++RG+Y M+PE+PFE
Sbjct: 180 TYNSLFLSPTFDSENPESSSRFGLRLKYKSFVEILSHAPKLWRRYSSRGRYAMMPEIPFE 239

Query: 233 KFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSH 292
            FRVGSQFF L +RHAL+V+KDR LW+KFK+PC     CYPEEHYFPTLLSM DP+GC+ 
Sbjct: 240 DFRVGSQFFTLTRRHALVVVKDRTLWRKFKIPCYRDDECYPEEHYFPTLLSMADPDGCTK 299

Query: 293 YTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIAS 352
           YTLT VNWT +V+GHP+TY   EISP LI  LR+SN   SY FARKF+PDC++PLM+IA 
Sbjct: 300 YTLTSVNWTGTVNGHPYTYRPTEISPELILRLRKSNHSESYLFARKFTPDCLEPLMRIAK 359

Query: 353 KVIFRD 358
            VIFRD
Sbjct: 360 SVIFRD 365

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
TAIR|locus:2083795	346	AT3G52060 [Arabidopsis thalian	0.762	0.789	0.645	2.7e-100
TAIR|locus:504956440	362	AT5G22070 [Arabidopsis thalian	0.796	0.787	0.618	7.6e-96
TAIR|locus:2116515	384	AT4G32290 [Arabidopsis thalian	0.673	0.627	0.492	8.7e-69
TAIR|locus:2145492	366	AT5G25330 [Arabidopsis thalian	0.748	0.732	0.494	1.7e-68
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.639	0.590	0.347	1.2e-37
TAIR|locus:2117542	389	AT4G25870 [Arabidopsis thalian	0.628	0.578	0.373	1.5e-37
TAIR|locus:2128181	376	AT4G31350 [Arabidopsis thalian	0.673	0.640	0.303	2.6e-31
TAIR|locus:2181945	386	AT5G11730 [Arabidopsis thalian	0.706	0.655	0.333	1.7e-27
TAIR|locus:2126525	401	AT4G30060 [Arabidopsis thalian	0.659	0.588	0.288	8.4e-26
TAIR|locus:2094781	383	AT3G21310 [Arabidopsis thalian	0.474	0.443	0.380	2.9e-25

TAIR|locus:2083795 AT3G52060 [Arabidopsis thaliana (taxid:3702)]

 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 186/288 (64%), Positives = 228/288 (79%)

Query:    74 NARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLS---DTHKLFQNRFI 130
             N  PKIAFLFLTNSDL F P+W  FF G++ LYN+Y+HADP++ +S   D+  +   +FI
Sbjct:    71 NPPPKIAFLFLTNSDLTFLPLWESFFQGHQDLYNVYIHADPTSSVSPLLDSSSI-NAKFI 129

Query:   131 PAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRV 190
             PA+RT RASPTLISA RRL+ANAILDDP NLYFAL+SQ CIPLHSF +++  LF +    
Sbjct:   130 PARRTARASPTLISAERRLLANAILDDPNNLYFALISQHCIPLHSFSYIHNHLFSDH--- 186

Query:   191 LNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALL 250
                       +SFIEILS +P L +RY ARG   MLPE+ ++ FRVGSQFF+LAKRHAL+
Sbjct:   187 --------HQQSFIEILSDEPFLLKRYNARGDDAMLPEIQYQDFRVGSQFFVLAKRHALM 238

Query:   251 VLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHT 310
             V+K+RKLW+KFKLPCL++ SCYPEEHYFPTLLS++DP+GCSH+TLTRVNWT SV GHPHT
Sbjct:   239 VIKERKLWRKFKLPCLDVESCYPEEHYFPTLLSLEDPQGCSHFTLTRVNWTGSVGGHPHT 298

Query:   311 YDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
             YD  EISP LIH+LR+SNS   YFFARKF+P+ ++PLM+IA  VIFRD
Sbjct:   299 YDASEISPQLIHSLRRSNSSLDYFFARKFTPESLQPLMEIADAVIFRD 346

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956440 AT5G22070 [Arabidopsis thaliana (taxid:3702)]

 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 183/296 (61%), Positives = 223/296 (75%)

Query:    74 NARPKIAFLFLTNSDLVFAPVWSQFFSGNER-LYNIYVHADPSAKLS--DTHKLFQNRFI 130
             N + KIAFLFLTNSDL FAP+W +FFSG+ + LYN+YVHADP   ++      +F+N FI
Sbjct:    67 NPKLKIAFLFLTNSDLHFAPIWDRFFSGHSKSLYNVYVHADPFVNVTRPGNGSVFENAFI 126

Query:   131 P-AKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIR 189
               AKRT RASPTLISA RRL+A A LDDP N YFA++SQ CIPLHSF +VY SLF +SI 
Sbjct:   127 ANAKRTARASPTLISATRRLLATAFLDDPANTYFAVLSQYCIPLHSFNYVYSSLFESSIF 186

Query:   190 VL-------NAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFI 242
                      N    +  ++SF+E++S +P L +RY ARG+Y M+PEVPFEKFRVGSQFF+
Sbjct:   187 DKSDPDPNPNPRGIRILYRSFMELISDEPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFV 246

Query:   243 LAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTD 302
             + +RHALL +KDR LW+KFKLPC     CYPEEHYFPTLL+MKDP+GC+ YTLTRVNWT 
Sbjct:   247 MTRRHALLTIKDRILWRKFKLPCYRSDECYPEEHYFPTLLNMKDPDGCTGYTLTRVNWTG 306

Query:   303 SVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVIFRD 358
             +V GHP+TY   E+ P LI  LR+SN   SYFFARKF+PDC+KPL+ IA  VIFRD
Sbjct:   307 TVKGHPYTYKPKEVVPELIQRLRRSNHSSSYFFARKFTPDCLKPLLAIADSVIFRD 362

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2116515 AT4G32290 [Arabidopsis thaliana (taxid:3702)]

 Score = 641 (230.7 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
 Identities = 126/256 (49%), Positives = 172/256 (67%)

Query:    78 KIAFLFLTNSDLVFAPVWSQFFSG-NERLYNIYVHADPSAKLSDTHK-LFQNRFIPAKRT 135
             KIAF++LT S L FAP+W  FF G ++ LYN+YVHADP+ +       +F NR I +K +
Sbjct:    93 KIAFMYLTTSPLPFAPLWEMFFDGISKNLYNVYVHADPTREYDPPFSGVFLNRVIHSKPS 152

Query:   136 ERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFS 195
              R +PTL +AARRL+A+A+LDDPLN  FA++S SC+P+ SF F Y++L            
Sbjct:   153 LRHTPTLTAAARRLLAHALLDDPLNYMFAVISPSCVPIRSFDFTYKTLV----------- 201

Query:   196 TQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDR 255
               S  KSFIEIL  +P   +R+ A G++ MLPEV  E+FR+GSQF++L +RHA +V +DR
Sbjct:   202 --SSRKSFIEILKDEPWQFDRWTAIGRHAMLPEVKLEEFRIGSQFWVLKRRHARVVARDR 259

Query:   256 KLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGE 315
             ++W KF   C+   SCYPEE YFPTLL+M+DP GC   TLT V+WT +  GHP  Y+  E
Sbjct:   260 RIWVKFNQTCVREDSCYPEESYFPTLLNMRDPRGCVPATLTHVDWTVNDGGHPRMYEPEE 319

Query:   316 ISPALIHTLRQSNSRY 331
             + P L+  LR++  RY
Sbjct:   320 VVPELVLRLRKTRPRY 335

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2145492 AT5G25330 [Arabidopsis thaliana (taxid:3702)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 146/295 (49%), Positives = 187/295 (63%)

Query:    78 KIAFLFLTNSDLVFAPVWSQFF---SGNERLYNIYVHADPSAKLSD-THKLFQNRFIPA- 132
             K+AF+FLT + L  AP+W  FF   S ++ LYN+YVH DP+ K    +H  FQNR IP+ 
Sbjct:    81 KLAFMFLTTNSLPLAPLWELFFNQSSHHKSLYNVYVHVDPTQKHKPGSHGTFQNRIIPSS 140

Query:   133 KRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLN 192
             K   R +PTLISAARRL+A+A+L+DP N  F L+S SCIPLHSF F Y++L  ++     
Sbjct:   141 KPAYRHTPTLISAARRLLAHALLEDPSNYMFILLSPSCIPLHSFNFTYKTLVSST----- 195

Query:   193 AFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVL 252
                     KSFIEIL  +P   ER+AARG Y M PEVP E+FR+GSQF+ L + HAL+V+
Sbjct:   196 --------KSFIEILKDEPGWYERWAARGPYAMFPEVPPEEFRIGSQFWTLTRAHALMVV 247

Query:   253 KDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYD 312
              D ++W KF   C+    CYPEEHYFPTLL+M+DP+GC   T+T V+W+ +  GHP TY 
Sbjct:   248 SDVEIWSKFNKSCVREDICYPEEHYFPTLLNMRDPQGCVSATVTHVDWSVNDHGHPRTYK 307

Query:   313 TGEISPALIHTLRQSNSRYS---------YFFARKFSPDCIKPLMKIASKVIFRD 358
               E+   LI  LR +  RY          + FARKFSP  I  LM I   VIF D
Sbjct:   308 PLEVRAELIQKLRSARPRYGDGNRTRKDPFLFARKFSPAGINQLMNITRSVIFND 362

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 89/256 (34%), Positives = 142/256 (55%)

Query:    75 ARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTH--KLFQNRFIPA 132
             A+ KIAF+FLT   L F  +W +FF G E  ++IY+H  PS +L   H  + F +R I +
Sbjct:    95 AKSKIAFMFLTPGTLPFEKLWDKFFQGQEGRFSIYIH--PS-RLRPVHISRHFSDREIHS 151

Query:   133 KRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLN 192
                     +++ A RRL+ANA L+DP N +F L+S+SCIPLH+F + YR L   ++  ++
Sbjct:   152 DHVTWGRISMVDAERRLLANA-LEDPDNQHFVLLSESCIPLHTFDYTYRYLMHANVSFID 210

Query:   193 AFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVL 252
             +F     H +                 R    MLPE+P + FR G+Q+F + ++HA++V+
Sbjct:   211 SFEDLGPHGT----------------GRHMDHMLPEIPRQDFRKGAQWFTMKRQHAVIVM 254

Query:   253 KDRKLWKKFKLPCL-NIHS---CYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHP 308
              D   + KF+  C   + +   C  +EHY PT   M DP G S++++T V+W++    HP
Sbjct:   255 ADGLYYSKFREYCRPGVEANKNCIADEHYLPTFFHMLDPGGISNWSVTYVDWSER-RWHP 313

Query:   309 HTYDTGEISPALIHTL 324
              TY   ++S  L+  +
Sbjct:   314 KTYRARDVSLKLLKNI 329

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2117542 AT4G25870 [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 94/252 (37%), Positives = 138/252 (54%)

Query:    72 FSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTH--KLFQNRF 129
             F     KIAFLFLT   L F  +W +FF G+E  ++IY+H  PS K    H  + F +R 
Sbjct:    93 FITNNSKIAFLFLTPGTLPFEKLWDEFFKGHEGKFSIYIH--PS-KERPVHISRHFSDRE 149

Query:   130 IPAKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIR 189
             I +        +++ A +RL+ +A L+DP N +F LVS+SCIPLH+F + YR L  +++ 
Sbjct:   150 IHSDEVTWGRISMVDAEKRLLVSA-LEDPDNQHFVLVSESCIPLHTFDYTYRYLLYSNV- 207

Query:   190 VLNAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHAL 249
                         SFIE    DP        R    MLPE+  E FR G+Q+F + ++HA+
Sbjct:   208 ------------SFIESFV-DPG--PHGTGRHMEHMLPEIAKEDFRKGAQWFTMKRQHAI 252

Query:   250 LVLKDRKLWKKFKLPC-LNIHS---CYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVD 305
             +V+ D   + KF+  C   I +   C  +EHY PT  +M DP G S++++T V+W++   
Sbjct:   253 IVMADGLYYSKFREYCGPGIEADKNCIADEHYLPTFFNMIDPMGISNWSVTFVDWSER-R 311

Query:   306 GHPHTYDTGEIS 317
              HP TY   EIS
Sbjct:   312 WHPKTYGGNEIS 323

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2128181 AT4G31350 [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 78/257 (30%), Positives = 134/257 (52%)

Query:    75 ARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKR 134
             A PK+AF+FLT   L F P+W  FF G+E  +++YVHA   + +  T   F  R I + +
Sbjct:    86 ANPKLAFMFLTPGTLPFEPLWEMFFRGHENKFSVYVHASKKSPVH-TSSYFVGRDIHSHK 144

Query:   135 TERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAF 194
                   +++ A RRL+A+A++D P N +F L+S SC+PL  F ++Y  L   ++  ++ F
Sbjct:   145 VAWGQISMVDAERRLLAHALVD-PDNQHFILLSDSCVPLFDFNYIYNHLIFANLSFIDCF 203

Query:   195 STQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKD 254
                  H S        P + ++   +G          + F +  +  I+    +L   K 
Sbjct:   204 EDPGPHGSGRYSQHMLPEVEKKDFRKGS---------QWFSMKRRHAIVVMADSLYYTK- 253

Query:   255 RKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTG 314
                +K +  P +   +CY +EHYFPTL +M DP+G +++++T V+W++    HP  Y+  
Sbjct:   254 ---FKLYCRPNMEGRNCYADEHYFPTLFNMIDPDGIANWSVTHVDWSEG-KWHPKLYNAR 309

Query:   315 EISPALIHTLRQSNSRY 331
             +I+P LI  ++     Y
Sbjct:   310 DITPYLIRKIKSIQLAY 326

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181945 AT5G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 98/294 (33%), Positives = 148/294 (50%)

Query:    77 PKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPS--AKLSDTHKLFQNRFIPAKR 134
             PK+AF+FLT   L  A +W +F  G++ LY++Y+H  PS  AK   +  +F  R IP++ 
Sbjct:   117 PKVAFMFLTKGPLPLASLWERFLKGHKGLYSVYLHPHPSFTAKFPAS-SVFHRRQIPSQV 175

Query:   135 TERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAF 194
              E    ++  A +RL+ANA+LD   N +F LVS+SCIPL++F  +Y            ++
Sbjct:   176 AEWGRMSMCDAEKRLLANALLDVS-NEWFVLVSESCIPLYNFTTIY------------SY 222

Query:   195 STQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKD 254
              ++SKH SF+     DP    R    G   M PEVP  K+R GSQ+F + +  A  ++KD
Sbjct:   223 LSRSKH-SFMGAFD-DPGPFGRGRYNGN--MEPEVPLTKWRKGSQWFEVNRDLAATIVKD 278

Query:   255 RKLWKKFK---LPCLNIHSCY-PEEHYF--PTLLSMKD------PEGCSH-YTLTRVNWT 301
                + KFK    P   +   Y P       PT+L+ +         G  H  T  R + T
Sbjct:   279 TLYYPKFKEFCRPACYVDEHYFPTMLTIEKPTVLANRSLTWVDWSRGGPHPATFGRSDIT 338

Query:   302 DSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVI 355
             ++  G    +D    S          N+   Y FARKF+P  ++PL+ IA K++
Sbjct:   339 ENFFGK--IFDGRNCS------YNGRNTSMCYLFARKFAPSALEPLLHIAPKIL 384

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2126525 AT4G30060 [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 73/253 (28%), Positives = 130/253 (51%)

Query:    78 KIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTER 137
             KIAF+FLT   L F  +W +FF G+E  +++Y+HA     +  + + F NR I +     
Sbjct:   109 KIAFMFLTPGTLPFERLWDRFFLGHEGKFSVYIHASKERPVHYS-RYFLNREIRSDEVVW 167

Query:   138 ASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQ 197
                +++ A RRL+ANA L D  N  F L+S SC+PL SF ++Y  L  +++  ++ F   
Sbjct:   168 GRISMVDAERRLLANA-LRDTSNQQFVLLSDSCVPLRSFEYIYNYLMHSNLSYVDCFDDP 226

Query:   198 SKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKL 257
              +H +   +    P + ++   +G          + F +  Q  +     +L   K    
Sbjct:   227 GQHGAGRHMNHMLPEIPKKDFRKGA---------QWFTMKRQHAVATMADSLYYSK---- 273

Query:   258 WKKFKLPCL-NIHSCYPEEHYFPTLLSMKDPEGCSHYTLTRVNWTDSVDGHPHTYDTGEI 316
             ++ +  P + N  +C  +EHY PT   M DP G +++T+T+V+W++    HP TY   +I
Sbjct:   274 FRDYCGPGIENNKNCIADEHYLPTFFHMLDPGGIANWTVTQVDWSER-KWHPKTYMPEDI 332

Query:   317 SPALIHTLRQSNS 329
             +  L++ L  +++
Sbjct:   333 THELLNNLTSTDT 345

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2094781 AT3G21310 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 73/192 (38%), Positives = 111/192 (57%)

Query:    77 PKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSD--THKLFQNRFIPAKR 134
             PK+AF+FLT   L FAP+W +FF G+E  Y+IYVH  P+ + SD  +  +F  R IP++ 
Sbjct:   114 PKMAFMFLTKGPLPFAPLWERFFKGHEGFYSIYVHTLPNYR-SDFPSSSVFYRRQIPSQH 172

Query:   135 TERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAF 194
                   ++  A RRL+ANA+LD   N +F L+S++CIPL  F FVYR            +
Sbjct:   173 VAWGEMSMCDAERRLLANALLDIS-NEWFVLLSEACIPLRGFNFVYR------------Y 219

Query:   195 STQSKHKSFIEILSRD-PNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRHALLVLK 253
              ++S++ SF+  +  D P    RY+    Y M PEV   ++R GSQ+F + +  A+ +++
Sbjct:   220 VSRSRY-SFMGSVDEDGPYGRGRYS----YAMGPEVSLNEWRKGSQWFEINRALAVDIVE 274

Query:   254 DRKLWKKFKLPC 265
             D   + KFK  C
Sbjct:   275 DMVYYNKFKEFC 286

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	358
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	1e-52

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  173 bits (442), Expect = 1e-52
 Identities = 92/260 (35%), Positives = 127/260 (48%), Gaps = 31/260 (11%)

Query: 79  IAFLFLT-NSDLVFAPVWSQFFSGNERLYNIYVHAD-PSAKLS----DTHKLFQNRFIP- 131
           IAF+FL    DL F P+W +FF   + LY IYV A  PS             F  R IP 
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHPQNLYCIYVDAKSPSEFKERLRALASCFFNVRVIPK 60

Query: 132 AKRTERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVL 191
           ++       +++ A RRL+AN +L DP   YF L+S+S IPL +F  +YR L   +    
Sbjct: 61  SEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGN-- 118

Query: 192 NAFSTQSKHKSFIEILSRDPNLAERYAARGQYVMLPEVPFE----KFRVGSQFFILAKRH 247
                     SF+E      +   +   R    MLPE+       K+R GSQ+F+L++  
Sbjct: 119 ---------NSFVESFD---DPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAF 166

Query: 248 ALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMK--DPEGCSHYTLTRVNWTDSVD 305
           A  V+ D   +  FK  C   ++CYP+EHYFPTLL M    P  C + TLT V+W     
Sbjct: 167 AEYVVSDNLYYPLFKYYC---NTCYPDEHYFPTLLGMPGHFPNTCVNRTLTYVDW-SRGG 222

Query: 306 GHPHTYDTGEISPALIHTLR 325
            HP TY   +I P  +  +R
Sbjct: 223 CHPKTYRPCDIGPEDLKRIR 242

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	358
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.87

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=8.2e-47  Score=353.28  Aligned_cols=232  Identities=24%  Similarity=0.291  Sum_probs=150.2

Q ss_pred             EEEEEEeCC-CCChhHHHHHHHccCCCceEEEEEcCCCCCCC--C-----CCCcccceeec-CcccccCCccHHHHHHHH
Q 018306           79 IAFLFLTNS-DLVFAPVWSQFFSGNERLYNIYVHADPSAKLS--D-----THKLFQNRFIP-AKRTERASPTLISAARRL  149 (358)
Q Consensus        79 iAfLfLa~~-~~~l~~Lwe~ff~~~~~~~sIYVH~D~k~~~~--~-----~~svf~~r~Ip-r~~V~WG~~SlV~AelrL  149 (358)
                      |||||+||+ +.++...|.+++.  ++...+|||+|+|++..  .     .......+.++ |++|.|||+|||+||++|
T Consensus         1 iAylil~h~~~~~~~~~l~~~l~--~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~v~WG~~S~v~A~l~l   78 (244)
T PF02485_consen    1 IAYLILAHKNDPEQLERLLRLLY--HPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVDVRWGGFSLVEATLNL   78 (244)
T ss_dssp             EEEEEEESS--HHHHHHHHHHH----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS-----TTSHHHHHHHHHH
T ss_pred             CEEEEEecCCCHHHHHHHHHHhc--CCCCEEEEEEcCCCChHHHHHHHHhcccCCceeecccccccccCCccHHHHHHHH
Confidence            799999987 7766666666655  35667889999996532  1     02222334677 999999999999999999


Q ss_pred             HHHHHhcCCCCcEEEEEcCCCccCCChHHHHHHHccCCcccccccccccccceeeeeccccc-cccccccccccccccCC
Q 018306          150 MANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDP-NLAERYAARGQYVMLPE  228 (358)
Q Consensus       150 L~~AL~d~~~n~~FvLLSgsdiPL~s~~~I~~~L~~~~~~~~~~~~~~~~~~sFie~~~~~~-~~~~Ry~~r~~~~m~p~  228 (358)
                      |+.|++.++.++|||||||+|+||+++++|++||+.++++           .+|++....+. ...+||..+....+.+.
T Consensus        79 l~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~-----------~~f~~~~~~~~~~~~~r~~~~~~~~~~~~  147 (244)
T PF02485_consen   79 LREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGD-----------NNFIESFSDEDPRESGRYNPRIYDPFRPF  147 (244)
T ss_dssp             HHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT-------------B---BEE--GGGG-HHHHEEEETTEEEE
T ss_pred             HHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCC-----------Ccceecccccccchhhcceeeeeeecccc
Confidence            9999993378999999999999999999999999988531           57888766432 12266665422223333


Q ss_pred             CCcccceeccceeeecHHHHHHHHhcHHHHHHhhccccCCCCccCcchhHhHhhcCC--CCCCCCCCceeEEeeCCCCCC
Q 018306          229 VPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMK--DPEGCSHYTLTRVNWTDSVDG  306 (358)
Q Consensus       229 i~~~~~rkGSQWfsLtR~~A~~Iv~d~~~~~~F~~~c~~~~~c~pDE~yf~TlL~~~--~~~~~~n~~ltyidW~~~~~~  306 (358)
                      ++..++++|||||+|||++|++|++|....+.|+++|+.  +|+|||+||||||.|.  ....+.++++|||||++.+++
T Consensus       148 ~~~~~~~~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~~--~~~pDE~ffqTll~n~~~~~~~~~~~~~r~i~W~~~~~~  225 (244)
T PF02485_consen  148 FRKRTLYKGSQWFSLTRDFVEYILDDPNYRPKLKKYFRF--SLCPDESFFQTLLNNSGHFKDTIVNRNLRYIDWSRRGGC  225 (244)
T ss_dssp             EEEE--EEE-S--EEEHHHHHHHHH-HHHHHHHHHHT-T--SSSGGGTHHHHH--SSGGG-B-TTTSSSEEE-BTGT-SS
T ss_pred             cccccccccceeeEeeHHHHHHhhhhHHHHHHHHHhhcC--ccCcchhhHHHhhcccchhcccccCCCEEEEECCCCCCC
Confidence            444589999999999999999999999988999999854  6789999999999987  456789999999999944789


Q ss_pred             CCccccCCCCCHHHHHHHH
Q 018306          307 HPHTYDTGEISPALIHTLR  325 (358)
Q Consensus       307 hP~~~~~~Dv~~e~l~~lr  325 (358)
                      ||++++..+++.++++.|+
T Consensus       226 ~p~~~~~~~~~~~d~~~~~  244 (244)
T PF02485_consen  226 HPKTLTICDLGPEDLPWLK  244 (244)
T ss_dssp             ---SSEEEE--GGGHHHH-
T ss_pred             CCCeeeeeeeCHHHHHhhC
Confidence            9999999999999988774

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=7.3e-44  Score=355.80  Aligned_cols=252  Identities=19%  Similarity=0.222  Sum_probs=185.2

Q ss_pred             CCCcEEEEEEeC-CCC-ChhHHHHHHHccCCCceEEEEEcCCCCCCCC------------CCCccccee-ec-CcccccC
Q 018306           75 ARPKIAFLFLTN-SDL-VFAPVWSQFFSGNERLYNIYVHADPSAKLSD------------THKLFQNRF-IP-AKRTERA  138 (358)
Q Consensus        75 ~~~KiAfLfLa~-~~~-~l~~Lwe~ff~~~~~~~sIYVH~D~k~~~~~------------~~svf~~r~-Ip-r~~V~WG  138 (358)
                      .+||+||||++| |+. .+.+|.+.+   .++.+.+|||+|+|++...            .-+.+.+.. +. +..|.||
T Consensus        76 ~~~r~AYLI~~h~~d~~~l~RLL~aL---YhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~vl~k~~~V~WG  152 (421)
T PLN03183         76 KLPRFAYLVSGSKGDLEKLWRTLRAL---YHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYMITKANLVTYR  152 (421)
T ss_pred             CCCeEEEEEEecCCcHHHHHHHHHHh---cCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEEEecceeeccC
Confidence            479999999998 674 466665554   3478889999999987531            011233333 34 5779999


Q ss_pred             CccHHHHHHHHHHHHHhcCCCCcEEEEEcCCCccCCChHH-HHHHHccCCcccccccccccccceeeeeccccc-ccc--
Q 018306          139 SPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRF-VYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDP-NLA--  214 (358)
Q Consensus       139 ~~SlV~AelrLL~~AL~d~~~n~~FvLLSgsdiPL~s~~~-I~~~L~~~~~~~~~~~~~~~~~~sFie~~~~~~-~~~--  214 (358)
                      |+|||+||+++++.+|....+++|||+|||+|+||+++++ |+.|+..+++            ++||++.+... ...  
T Consensus       153 G~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~------------~NFI~~~s~~~wk~~~r  220 (421)
T PLN03183        153 GPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRN------------LNFIEHTSQLGWKEEKR  220 (421)
T ss_pred             ChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCC------------ceeeecccccccchhhh
Confidence            9999999999999998854789999999999999999999 6788887775            78998765211 011  


Q ss_pred             --------ccccccccccc---c-CCCC-cccceeccceeeecHHHHHHHHh--c--HHHHHHhhccccCCCCccCcchh
Q 018306          215 --------ERYAARGQYVM---L-PEVP-FEKFRVGSQFFILAKRHALLVLK--D--RKLWKKFKLPCLNIHSCYPEEHY  277 (358)
Q Consensus       215 --------~Ry~~r~~~~m---~-p~i~-~~~~rkGSQWfsLtR~~A~~Iv~--d--~~~~~~F~~~c~~~~~c~pDE~y  277 (358)
                              +.|..+....+   . ...| ..++++|||||+|||++|+||+.  |  .+....|.+.     +++|||+|
T Consensus       221 ~~~~i~~pgl~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~~-----t~~pdE~f  295 (421)
T PLN03183        221 AMPLIIDPGLYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTN-----FVSSPEGY  295 (421)
T ss_pred             cceEEecCceeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHhc-----CCCCchHH
Confidence                    11110000000   0 0112 24689999999999999999995  2  3445556554     34599999


Q ss_pred             HhHhhcCCC--CCCCCCCceeEEeeCCCCCCCCccccCCCCCHHHHHHHHhcCCCCCceEEecCCCCCcHHHHHHhhhhc
Q 018306          278 FPTLLSMKD--PEGCSHYTLTRVNWTDSVDGHPHTYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPLMKIASKVI  355 (358)
Q Consensus       278 f~TlL~~~~--~~~~~n~~ltyidW~~~~~~hP~~~~~~Dv~~e~l~~lr~~~~~~~~LFARKF~~~~~~~Ll~~~~~~~  355 (358)
                      |||+|+|..  ...+.|.++|||||.++++.||++|+.+|     +++|.++    +++|||||+.  .+++|+.+|+.+
T Consensus       296 FqTVl~NS~~f~~t~vn~nLRyI~W~~~~~~~P~~l~~~D-----~~~l~~S----~~lFARKFd~--d~~vl~~Id~~l  364 (421)
T PLN03183        296 FHTVICNVPEFAKTAVNHDLHYISWDNPPKQHPHTLSLND-----TEKMIAS----GAAFARKFRR--DDPVLDKIDKEL  364 (421)
T ss_pred             HHHHHhhcccccccccCCceeEEecCCCCCCCCcccCHHH-----HHHHHhC----CCccccCCCC--ChHHHHHHHHHH
Confidence            999999963  45678899999999985556999998654     5778774    7899999997  468999999887


Q ss_pred             cC
Q 018306          356 FR  357 (358)
Q Consensus       356 ~~  357 (358)
                      ++
T Consensus       365 l~  366 (421)
T PLN03183        365 LG  366 (421)
T ss_pred             hC
Confidence            64

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.87  E-value=2.1e-21  Score=196.59  Aligned_cols=221  Identities=17%  Similarity=0.153  Sum_probs=151.5

Q ss_pred             cEEEEEEeCCCCChhHHHHHHHcc-CCCceEEEEEcCCCCCCC------CCCCcccceeec--CcccccCCccHHHHHHH
Q 018306           78 KIAFLFLTNSDLVFAPVWSQFFSG-NERLYNIYVHADPSAKLS------DTHKLFQNRFIP--AKRTERASPTLISAARR  148 (358)
Q Consensus        78 KiAfLfLa~~~~~l~~Lwe~ff~~-~~~~~sIYVH~D~k~~~~------~~~svf~~r~Ip--r~~V~WG~~SlV~Aelr  148 (358)
                      =+||+.+++|+..   ..+++++. .++.+-.+||+|.++...      +-.++|.|..|.  +..|.|||.|++.|.++
T Consensus       104 ~~a~~~~v~kd~~---~verll~aiYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v~~k~~~v~~~G~s~l~a~l~  180 (439)
T KOG0799|consen  104 PAAFLRVVYKDYE---QVERLLQAIYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIVLPKRESVTYGGHSILAAHLN  180 (439)
T ss_pred             ceEEEEeecccHH---HHHHHHHHHhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceEEeccccceecCCchhhHHHHH
Confidence            4677777799952   22444443 346667789999998754      346677776653  78999999999999999


Q ss_pred             HHHHHHhcCCCCcEEEEEcCCCccCCChHHHHHHHccCCcccccccccccccceeeeeccccccc---cccccc------
Q 018306          149 LMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNL---AERYAA------  219 (358)
Q Consensus       149 LL~~AL~d~~~n~~FvLLSgsdiPL~s~~~I~~~L~~~~~~~~~~~~~~~~~~sFie~~~~~~~~---~~Ry~~------  219 (358)
                      +|+.+++...+++||++|||+|+||+++.++.+.|..-++            ..||+........   ..++..      
T Consensus       181 c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g------------~N~i~~~~~~~~~~~~~~k~~~~~~~~~  248 (439)
T KOG0799|consen  181 CLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRG------------ANFVEHTSEIGWKLNRKAKWDIIDLKYF  248 (439)
T ss_pred             HHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCC------------cccccCcccccHHHhcccCCcccccchh
Confidence            9999998645699999999999999999999999987664            6677764421110   111110      


Q ss_pred             ccccccc-CCCC-cccceeccceeeecHHHHHHHHhcHHHHHHhhccccCCCCccCcchhHhHhhcCCCCCCCCCCc--e
Q 018306          220 RGQYVML-PEVP-FEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCSHYT--L  295 (358)
Q Consensus       220 r~~~~m~-p~i~-~~~~rkGSQWfsLtR~~A~~Iv~d~~~~~~F~~~c~~~~~c~pDE~yf~TlL~~~~~~~~~n~~--l  295 (358)
                      +.+..+. +.+| ..++++||.|++|+|++|++++.... -+.+.++.++  +..|||+||+|++.|.....-.+.+  +
T Consensus       249 ~~~s~~~~~~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~~-~~~ll~~~~~--t~~~dE~f~~Tl~~n~~~~~g~~~~~~l  325 (439)
T KOG0799|consen  249 RNKSPLPWVILPTALKLFKGSAWVSLSRAFVEYLISGNL-PRTLLMYYNN--TYSPDEGFFHTLQCNPFGMPGVFNDECL  325 (439)
T ss_pred             eecCCCccccCCCceEEEecceeEEEeHHHHHHHhcCcc-HHHHHHHHhC--ccCcchhhhHhhhccccCCCCcccchhh
Confidence            0000111 1112 24588999999999999999998633 2233333332  5569999999999998222223334  8


Q ss_pred             eEEeeCC----CCCCCCccccCCCC
Q 018306          296 TRVNWTD----SVDGHPHTYDTGEI  316 (358)
Q Consensus       296 tyidW~~----~~~~hP~~~~~~Dv  316 (358)
                      |++.|..    .-+.||+.++..|.
T Consensus       326 r~~~W~~~~~~~~~~~c~~~~~~~~  350 (439)
T KOG0799|consen  326 RYTNWDRKDVDPPKQHCHSLTVRDF  350 (439)
T ss_pred             cceecccccccccccCCcccccccc
Confidence            9999986    22457888776664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	358
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	1e-20
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score = 91.0 bits (225), Expect = 1e-20
 Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 53/324 (16%)

Query: 70  LSFSNARPKIAFLFLTNSDLVFAPVWSQFFSGNERLYNIYVHADPSAKLSDTHKL----- 124
           L+       IA+  + +  +    +     +         +H D  A+ S    +     
Sbjct: 77  LTKEEVGFPIAYSIVVHHKIEM--LDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIAS 134

Query: 125 -FQNRFIPAKR--TERASPTLISAARRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYR 181
            F N F+ ++      AS T + A    M +    +    Y   +     P+ +   + R
Sbjct: 135 CFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVR 194

Query: 182 SLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAA----------RGQYVMLPEVPF 231
            L              S  ++ +E     PN  ER+                V  P    
Sbjct: 195 KL------------KCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLK 242

Query: 232 EKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPEGCS 291
                GS +F++ + +   VL++  +    KL      +  P+E  + T+  + +  G  
Sbjct: 243 TPLFSGSAYFVVTREYVGYVLENENIQ---KLMEWAQDTYSPDEFLWATIQRIPEVPGSF 299

Query: 292 HYTLTR-----------VNWTDSVDGHPHTYDTGEISPALIHTLR-------QSNSRYSY 333
             +              V W        +       S   + ++            R  +
Sbjct: 300 PSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHH 359

Query: 334 FFARKFSPDCIKPLMKIASKVIFR 357
            FA KF  D     ++   + + R
Sbjct: 360 LFANKFDMDVDPFAIQCLDEHLRR 383

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 6e-08
 Identities = 42/319 (13%), Positives = 89/319 (27%), Gaps = 101/319 (31%)

Query: 100 SGNERLYNIYVHADPSAKLSDTHKLFQNRFIPAKRTERASP--TLISAARRLMANAILDD 157
           S   R+Y          +L + +++F    +      R  P   L  A   L     +  
Sbjct: 106 SMMTRMYIEQRD-----RLYNDNQVFAKYNVS-----RLQPYLKLRQALLELRPAKNV-- 153

Query: 158 PLNLY-------FALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSR- 209
              +          +    C    S++          I  LN     +  ++ +E+L + 
Sbjct: 154 --LIDGVLGSGKTWVALDVC---LSYKVQ--CKMDFKIFWLN-LKNCNSPETVLEMLQKL 205

Query: 210 ----DPNLAERYAARGQYVMLPEVPFEKFRVGSQFFILAKRH--ALLVL---KDRKLWKK 260
               DPN    + +R  +    ++     +   +  + +K +   LLVL   ++ K W  
Sbjct: 206 LYQIDPN----WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 261 FKLPCLNIHSCYPEEHYFPTLLSMKD--------PEGCSHYTLTRV-------------- 298
           F L C               LL+ +             +H +L                 
Sbjct: 262 FNLSC-------------KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 299 NWTD-SVDGHPHTYDTGEISP---ALI-HTLRQSNSRYSYF--------------FARKF 339
            + D      P   +    +P   ++I  ++R   + +  +                   
Sbjct: 309 KYLDCRPQDLPR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 340 SPDCIKPLMKIASKVIFRD 358
            P   + +       +F  
Sbjct: 367 EPAEYRKMFD--RLSVFPP 383

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	358
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=1.8e-52  Score=416.81  Aligned_cols=252  Identities=17%  Similarity=0.186  Sum_probs=199.8

Q ss_pred             CCcEEEEEEeCCCCChhHHHHHHHccC-CCceEEEEEcCCCCCCC------CCCCcccceee--cCcccccCCccHHHHH
Q 018306           76 RPKIAFLFLTNSDLVFAPVWSQFFSGN-ERLYNIYVHADPSAKLS------DTHKLFQNRFI--PAKRTERASPTLISAA  146 (358)
Q Consensus        76 ~~KiAfLfLa~~~~~l~~Lwe~ff~~~-~~~~sIYVH~D~k~~~~------~~~svf~~r~I--pr~~V~WG~~SlV~Ae  146 (358)
                      .+||||||++||++   +.|++++++. ++.+.+|||+|++++..      ...++|.++.|  +|+.|.|||+|||+||
T Consensus        83 ~~kiAflil~h~d~---~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg~S~v~A~  159 (391)
T 2gak_A           83 GFPIAYSIVVHHKI---EMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWTRVKAD  159 (391)
T ss_dssp             TSCEEEEEEECSCH---HHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTSHHHHHHH
T ss_pred             CCCEEEEEEecCCH---HHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCCchHHHHH
Confidence            58999999999985   6778888853 58889999999998642      12456777776  3899999999999999


Q ss_pred             HHHHHHHHhcCCCCcEEEEEcCCCccCCChHHHHHHHccCCcccccccccccccceeeeecccccccccccccc------
Q 018306          147 RRLMANAILDDPLNLYFALVSQSCIPLHSFRFVYRSLFGNSIRVLNAFSTQSKHKSFIEILSRDPNLAERYAAR------  220 (358)
Q Consensus       147 lrLL~~AL~d~~~n~~FvLLSgsdiPL~s~~~I~~~L~~~~~~~~~~~~~~~~~~sFie~~~~~~~~~~Ry~~r------  220 (358)
                      ++||++||+++.+|+|||||||+|+||+++++|++||+.+++            ++||++.+......+|+..+      
T Consensus       160 l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~------------~nFIe~~~~~~~~~~R~~~~~~~~~~  227 (391)
T 2gak_A          160 LNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTG------------ENNLETEKMPPNKEERWKKRYAVVDG  227 (391)
T ss_dssp             HHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTT------------CCBCCBEECCGGGSHHHHEEEEEETT
T ss_pred             HHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCC------------CceeeccCCCcccccceEeeeecccc
Confidence            999999998746899999999999999999999999998664            89999886432212232211      


Q ss_pred             ------ccccccCCCCcccceeccceeeecHHHHHHHHhcHHHHHHhhccccCCCCccCcchhHhHhhcCCCCC-C----
Q 018306          221 ------GQYVMLPEVPFEKFRVGSQFFILAKRHALLVLKDRKLWKKFKLPCLNIHSCYPEEHYFPTLLSMKDPE-G----  289 (358)
Q Consensus       221 ------~~~~m~p~i~~~~~rkGSQWfsLtR~~A~~Iv~d~~~~~~F~~~c~~~~~c~pDE~yf~TlL~~~~~~-~----  289 (358)
                            .+..+.|.  ..+|++|||||+|||++|++|++|.. .+.|.++|+.  +|+|||||||||+.+.+.. .    
T Consensus       228 ~l~~~~~~k~~~P~--~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~~~k~--t~~pDE~ffqTll~~~~~pg~~~~~  302 (391)
T 2gak_A          228 KLTNTGIVKAPPPL--KTPLFSGSAYFVVTREYVGYVLENEN-IQKLMEWAQD--TYSPDEFLWATIQRIPEVPGSFPSS  302 (391)
T ss_dssp             EEEEEEEECCCCSC--SSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHHHHTT--SSSGGGTHHHHHTTSTTSTTCCCSS
T ss_pred             ceeeecccccCCcc--ccceecccceeEecHHHHHHHHhCCc-HHHHHHHHcC--CcCCchhHHHHHhhccCCCCccccc
Confidence                  01123342  35899999999999999999999865 7788888887  8999999999999876422 1    


Q ss_pred             ------CCCCceeEEeeCC------CCCCCCc----------cccCCCCCHHHHHHHHhcCCCCCceEEecCCCCCcHHH
Q 018306          290 ------CSHYTLTRVNWTD------SVDGHPH----------TYDTGEISPALIHTLRQSNSRYSYFFARKFSPDCIKPL  347 (358)
Q Consensus       290 ------~~n~~ltyidW~~------~~~~hP~----------~~~~~Dv~~e~l~~lr~~~~~~~~LFARKF~~~~~~~L  347 (358)
                            ..++++|||+|+.      .|++||.          +|+.+|     ++.|+++    ++||||||+++++.++
T Consensus       303 ~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~D-----l~~l~~s----~~lFARKF~~~~d~~~  373 (391)
T 2gak_A          303 NKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGD-----LSWMLRQ----HHLFANKFDMDVDPFA  373 (391)
T ss_dssp             GGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGG-----HHHHTTS----CCSEEECCCTTTCHHH
T ss_pred             cccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHH-----HHHHHhC----CCceEEccCCccCHHH
Confidence                  1377899999973      1345777          677655     5778763    8999999999999999


Q ss_pred             HHHhhhhcc
Q 018306          348 MKIASKVIF  356 (358)
Q Consensus       348 l~~~~~~~~  356 (358)
                      ++.+++.+.
T Consensus       374 l~~l~~~l~  382 (391)
T 2gak_A          374 IQCLDEHLR  382 (391)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00