Citrus Sinensis ID: 018315

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MSNHWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRTPAAAASATPVAAAGGKTVGRWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATAASSGSGKDEHMAKTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGMGGGNNNGGGGSKDGSSNGSFSGELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERSNRHRI
cccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccEEcccccEEEEEEEEEEccccEEEEEEcccccccccccccccEEEEEEcccccccccccccccccEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccc
ccccEEEEEEEEEccccccHHHHHHHHHHccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEcEccccccccccccccccccccccccccccccccccccccccHHHHHccccHHHEccccccEEEEEEEEEccccEEEEEEccccEEEEEEccccEEEEEcccccccccccccccccccEEEEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHccccc
MSNHWRWFSVQFCrnnnnnssannihggyhhhqlntgstfrtpaaaasatpvaaaggktVGRWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATaassgsgkdehmAKTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAvnvrsagdiMTLTAGAATALRGAATLKARALKEVWNIAAvipvekgmgggnnnggggskdgssngsfsgelvpeenfLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEvipdmpawpgrhlleggedrryfGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERSNRHRI
MSNHWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRTPAAAASatpvaaaggktvgrWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATaassgsgkdEHMAKTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGMGGGNNNGGGGSKDGSSNGSFSGELVPEENFLGICSRELLARGCELLkrtrkgdlhwkIVSVYINRLNQVMLKMKSRHvagtitkkkknvvlevipdmpawpgrhlleggedRRYFGLKTVLRGVVEFECRsqreydiwtqGVARLLNVaaersnrhri
MSNHWRWFSVQFCRnnnnnssannIHGGYHHHQLNTGSTFRtpaaaasatpvaaaGGKTVGRWLKDrrekkkeearVHNAQLHaaitvagvaaavaaiaaataassgsgKDEHMAKTDMavasaatlvaaqcvETAEAMGAEREHLaavvssavnvrsaGDIMtltagaatalrgaatlkaralkEVWNIAAVIPVEKgmgggnnnggggskdgssngsfsgELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERSNRHRI
*******************************************************************************AQLHAAITVAGVAAAVAAIAAA******************AVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVE****************************PEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA*********
***HWRWFSVQFCR****************HHQL***********************************************LHAAITVAGVAAAVAAI**********************VASAATLVAAQCVETAEAMGAEREH****************IMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGM************************VPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWP******GGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAE*******
MSNHWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRT***************KTVGRWLKD**********VHNAQLHAAITVAGVAAAVAAIA****************KTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGMGGGNNNGGGGSKDGSSNGSFSGELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAA********
*SNHWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRTPAAAA**********KTVGRWLKDRREKKKEEAR*H*AQLHAAITVAGVAAAVAAIA******************************AQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGM***********************LVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERSN****
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oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSNHWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRTPAAAASATPVAAAGGKTVGRWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATAASSGSGKDEHMAKTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKGMGGGNNNGGGGSKDGSSNGSFSGELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERSNRHRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
224111118 485 predicted protein [Populus trichocarpa] 0.818 0.604 0.832 1e-123
15228863 472 uncharacterized protein [Arabidopsis tha 0.924 0.701 0.716 1e-121
255552063 477 ice binding protein, putative [Ricinus c 0.874 0.656 0.829 1e-120
22328630 475 uncharacterized protein [Arabidopsis tha 0.927 0.698 0.728 1e-120
79325115336 uncharacterized protein [Arabidopsis tha 0.927 0.988 0.725 1e-120
297830992 476 hypothetical protein ARALYDRAFT_898762 [ 0.924 0.695 0.717 1e-119
297800744 472 hypothetical protein ARALYDRAFT_493425 [ 0.882 0.669 0.766 1e-118
224099835 471 predicted protein [Populus trichocarpa] 0.916 0.696 0.773 1e-118
2244831 495 hypothetical protein [Arabidopsis thalia 0.927 0.670 0.685 1e-116
449455298 482 PREDICTED: uncharacterized protein LOC10 0.804 0.597 0.849 1e-116
>gi|224111118|ref|XP_002315753.1| predicted protein [Populus trichocarpa] gi|222864793|gb|EEF01924.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/305 (83%), Positives = 275/305 (90%), Gaps = 12/305 (3%)

Query: 62  RWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATAASSGSGKDEHMAKTDMAV 121
           RWLKDRREKKKEE R HNAQLHAAI+VAGVAAA+AAIAAATAASSG+GKDE MAKTDMAV
Sbjct: 185 RWLKDRREKKKEETRAHNAQLHAAISVAGVAAAIAAIAAATAASSGAGKDEQMAKTDMAV 244

Query: 122 ASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAAT--------AL 173
           ASAATLVAAQCVE AEAMGAEREHLA+VV+SAVNVRSAGDIMTLTA AAT        +L
Sbjct: 245 ASAATLVAAQCVEAAEAMGAEREHLASVVNSAVNVRSAGDIMTLTAAAATGMFVFLYFSL 304

Query: 174 RGAATLKARALKEVWNIAAVIPVEKGMGGGNNNGGGGSKDGSSNGSFSGELVPEENFLGI 233
           RGAATLKARALKEVWNIAAVIPV+KG+     N      +GSSNGSFSGELVPEENFLGI
Sbjct: 305 RGAATLKARALKEVWNIAAVIPVDKGLAVAGGN----GSNGSSNGSFSGELVPEENFLGI 360

Query: 234 CSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEV 293
           CSRELLARGCELLKRTRKGDLHWKIVSVY+NR+NQVMLKMKS+HVAGTITKKKKNVVL V
Sbjct: 361 CSRELLARGCELLKRTRKGDLHWKIVSVYVNRMNQVMLKMKSKHVAGTITKKKKNVVLAV 420

Query: 294 IPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAERS 353
           I DMPAWPGRHLLEGGE RRYFGLKT+ RGVVEFEC +Q+EYD+WTQGV+RLL++AAE+ 
Sbjct: 421 IKDMPAWPGRHLLEGGEHRRYFGLKTLQRGVVEFECMNQKEYDLWTQGVSRLLSIAAEKG 480

Query: 354 NRHRI 358
           NRHR+
Sbjct: 481 NRHRV 485

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15228863|ref|NP_188920.1| uncharacterized protein [Arabidopsis thaliana] gi|9279699|dbj|BAB01256.1| unnamed protein product [Arabidopsis thaliana] gi|332643158|gb|AEE76679.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255552063|ref|XP_002517076.1| ice binding protein, putative [Ricinus communis] gi|223543711|gb|EEF45239.1| ice binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|22328630|ref|NP_193210.2| uncharacterized protein [Arabidopsis thaliana] gi|42572905|ref|NP_974549.1| uncharacterized protein [Arabidopsis thaliana] gi|18377642|gb|AAL66971.1| unknown protein [Arabidopsis thaliana] gi|23297568|gb|AAN12896.1| unknown protein [Arabidopsis thaliana] gi|332658090|gb|AEE83490.1| uncharacterized protein [Arabidopsis thaliana] gi|332658091|gb|AEE83491.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79325115|ref|NP_001031642.1| uncharacterized protein [Arabidopsis thaliana] gi|51968530|dbj|BAD42957.1| unknown protein [Arabidopsis thaliana] gi|332658092|gb|AEE83492.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297830992|ref|XP_002883378.1| hypothetical protein ARALYDRAFT_898762 [Arabidopsis lyrata subsp. lyrata] gi|297329218|gb|EFH59637.1| hypothetical protein ARALYDRAFT_898762 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297800744|ref|XP_002868256.1| hypothetical protein ARALYDRAFT_493425 [Arabidopsis lyrata subsp. lyrata] gi|297314092|gb|EFH44515.1| hypothetical protein ARALYDRAFT_493425 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224099835|ref|XP_002311638.1| predicted protein [Populus trichocarpa] gi|222851458|gb|EEE89005.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2244831|emb|CAB10253.1| hypothetical protein [Arabidopsis thaliana] gi|7268180|emb|CAB78516.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449455298|ref|XP_004145390.1| PREDICTED: uncharacterized protein LOC101203405 [Cucumis sativus] gi|449523061|ref|XP_004168543.1| PREDICTED: uncharacterized protein LOC101231416 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
TAIR|locus:2130185475 AT4G14740 [Arabidopsis thalian 0.905 0.682 0.487 4.3e-77
TAIR|locus:2094414472 AT3G22810 [Arabidopsis thalian 0.905 0.686 0.473 1e-75
TAIR|locus:2149514453 AT5G43870 [Arabidopsis thalian 0.807 0.637 0.47 3e-69
TAIR|locus:2077294498 FKD1 "FORKED 1" [Arabidopsis t 0.905 0.650 0.404 8.1e-60
TAIR|locus:1006230325124 AT4G32785 [Arabidopsis thalian 0.301 0.870 0.572 1.1e-25
TAIR|locus:2130888405 AT4G17350 [Arabidopsis thalian 0.282 0.249 0.456 1.7e-18
TAIR|locus:2168943406 AT5G47440 [Arabidopsis thalian 0.293 0.258 0.420 4.1e-15
TAIR|locus:2129031429 AT4G16670 [Arabidopsis thalian 0.558 0.466 0.257 2.8e-14
TAIR|locus:2130185 AT4G14740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
 Identities = 159/326 (48%), Positives = 180/326 (55%)

Query:    32 HQLNT-GSTFRXXXXXXXXXXXXXXGGKTVGRWLKDXXXXXXXXXXVHNAQLHXXXXXXX 90
             + LN+  S FR                KTVGRWLKD           HNAQ+H       
Sbjct:   149 NSLNSVNSQFRSTAATPGPITATATQSKTVGRWLKDRREKKKEETRAHNAQIHAAVSVAG 208

Query:    91 XXXXXXXXXXXXXXXXXXXKDEHMAKTDMXXXXXXXXXXXXXXETAEAMGAEREHLXXXX 150
                                KDE MAKTDM              E AE MGAERE+L    
Sbjct:   209 VAAAVAAIAAATAASSSCGKDEQMAKTDMAVASAATLVAAQCVEAAEVMGAEREYLASVV 268

Query:   151 XXXXXXXXXGDIMXXXXXXXXXXXXXXXXXXXXXXEVWNIAAVIPVEKXXXXXXXXXXXX 210
                      GDIM                      EVWNIA+VIP++K            
Sbjct:   269 SSAVNVRSAGDIMTLTAGAATALRGVQTLKARAMKEVWNIASVIPMDKGLTSTGGSSNNV 328

Query:   211 XXXXXXXXXXXX-ELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQV 269
                          ELV +ENFLG CSRE LARGCELLKRTRKGDLHWKIVSVYIN++NQV
Sbjct:   329 NGSNGSSSSSHSGELVQQENFLGTCSREWLARGCELLKRTRKGDLHWKIVSVYINKMNQV 388

Query:   270 MLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGVVEFEC 329
             MLKMKSRHV GT TKKKKN+VL+VI ++PAWPGRHLLEGG+D RYFGLKTV+RG VEFE 
Sbjct:   389 MLKMKSRHVGGTFTKKKKNIVLDVIKNVPAWPGRHLLEGGDDLRYFGLKTVMRGDVEFEV 448

Query:   330 RSQREYDIWTQGVARLLNVAAERSNR 355
             +SQREY++WTQGV+RLL +AAER  R
Sbjct:   449 KSQREYEMWTQGVSRLLVLAAERKFR 474
GO:0005634 "nucleus" evidence=ISM
GO:0009507 "chloroplast" evidence=ISM
GO:0007165 "signal transduction" evidence=ISS
GO:0035091 "phosphatidylinositol binding" evidence=ISS
TAIR|locus:2094414 AT3G22810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149514 AT5G43870 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077294 FKD1 "FORKED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1006230325 AT4G32785 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130888 AT4G17350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168943 AT5G47440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129031 AT4G16670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
pfam05703226 pfam05703, Auxin_canalis, Auxin canalisation 6e-64
pfam08458110 pfam08458, PH_2, Plant pleckstrin homology-like re 2e-55
cd13365115 cd13365, PH_PLC_plant-like, Plant-like Phospholipa 6e-05
PRK13875440 PRK13875, PRK13875, conjugal transfer protein TrbL 0.001
>gnl|CDD|218706 pfam05703, Auxin_canalis, Auxin canalisation Back     alignment and domain information 
 Score =  202 bits (516), Expect = 6e-64
 Identities = 99/151 (65%), Positives = 117/151 (77%), Gaps = 6/151 (3%)

Query: 54  AAGGKTVGRWLKDRRE-----KKKEEARVHNAQLHAAITVAGVAAAVAAIAAATAASSGS 108
           A G KT+GRW   R+E     KKK+EARV NAQ+HAA++VA VAAAVAA+ AAT ASS S
Sbjct: 76  ANGRKTIGRWFHHRKESSGNRKKKDEARVENAQVHAAVSVAAVAAAVAAVTAATNASS-S 134

Query: 109 GKDEHMAKTDMAVASAATLVAAQCVETAEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAG 168
           G D   +K D A+ASAA LVA+ CVE AE+ GA+R+ +A+ V SAV+VRS GD+MTLTA 
Sbjct: 135 GGDGAGSKMDTALASAAALVASHCVEMAESAGADRDQVASAVRSAVDVRSPGDLMTLTAA 194

Query: 169 AATALRGAATLKARALKEVWNIAAVIPVEKG 199
           AATALRGAATLKARA KE  N AAV+PVEKG
Sbjct: 195 AATALRGAATLKARAPKEARNNAAVLPVEKG 225

This domain is frequently found at the N-terminus of proteins containing pfam08458 at the C-terminus. It is a component of the auto-regulatory loop which enables auxin canalisation by recruitment of the PIN1 auxin efflux protein to the cell membrane. Length = 226
>gnl|CDD|219853 pfam08458, PH_2, Plant pleckstrin homology-like region Back     alignment and domain information
>gnl|CDD|241519 cd13365, PH_PLC_plant-like, Plant-like Phospholipase C (PLC) pleckstrin homology (PH) domain Back     alignment and domain information
>gnl|CDD|237537 PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
PF05703242 Auxin_canalis: Auxin canalisation; InterPro: IPR00 100.0
PF08458110 PH_2: Plant pleckstrin homology-like region; Inter 100.0
PF12814123 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin 97.21
smart00233102 PH Pleckstrin homology domain. Domain commonly fou 96.63
PF00169104 PH: PH domain; InterPro: IPR001849 The pleckstrin 96.05
cd0082196 PH Pleckstrin homology (PH) domain. Pleckstrin hom 94.82
cd0125094 PH_centaurin Centaurin Pleckstrin homology (PH) do 94.34
cd01219101 PH_FGD FGD (faciogenital dysplasia protein) plecks 92.16
cd0122099 PH_CDEP Chondrocyte-derived ezrin-like domain cont 90.66
cd0090099 PH-like Pleckstrin homology-like domain. Pleckstri 89.85
cd01249104 PH_oligophrenin Oligophrenin Pleckstrin homology ( 87.39
cd01235101 PH_SETbf Set binding factor Pleckstrin Homology (P 86.94
cd01248115 PH_PLC Phospholipase C (PLC) pleckstrin homology ( 86.82
cd01254121 PH_PLD Phospholipase D (PLD) pleckstrin homology ( 85.33
cd01261112 PH_SOS Son of Sevenless (SOS) Pleckstrin homology 85.33
cd0126595 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain 84.38
cd01233100 Unc104 Unc-104 pleckstrin homology (PH) domain. Un 84.04
cd01251103 PH_centaurin_alpha Centaurin alpha Pleckstrin homo 80.87
>PF05703 Auxin_canalis: Auxin canalisation; InterPro: IPR008546 This domain consists of several plant proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=3.7e-63  Score=461.74  Aligned_cols=144  Identities=77%  Similarity=0.984  Sum_probs=141.3

Q ss_pred             CCcchhhhhhhhHHHhHHHHhhhhhhhhhHHhHHHHHHHHHHHHHhhhccCCCCCccchhhhhHHHHhHHHHHHHHHHHH
Q 018315           56 GGKTVGRWLKDRREKKKEEARVHNAQLHAAITVAGVAAAVAAIAAATAASSGSGKDEHMAKTDMAVASAATLVAAQCVET  135 (358)
Q Consensus        56 ~~~tvgrWlk~~k~KKKEe~R~~nAqvHAAVSVAgVAAAvAAvaAata~ss~~~~d~~~ak~~~AvASAAaLvAaqCvE~  135 (358)
                      +++||||||||+|+|||||+|+||||||||||||+||||||||+++++.+++++.+++++||+|||||||+|||+||||+
T Consensus        99 ~~~~i~~w~~~~~~kkkee~R~~~A~vhaAvSVA~vAaavAavaa~~~~~~~~~~~~~~~k~~~avASAa~LvAa~C~e~  178 (242)
T PF05703_consen   99 GGKTIGRWLKDRKEKKKEEARAHNAQVHAAVSVAGVAAAVAAVAAATAASSSSGKDESSSKMDAAVASAAALVAAQCAEA  178 (242)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             HHHcCCCchhHHHhhhhhhccccCCchhhhhhHHHhccchhHHHHHHhhhhhhhcceecccccc
Q 018315          136 AEAMGAEREHLAAVVSSAVNVRSAGDIMTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKG  199 (358)
Q Consensus       136 AE~~GA~rd~vasaV~SAV~vrs~gDimTLTAaAATALRGAAtLKaR~~ke~~n~Aav~P~ek~  199 (358)
                      ||+|||+||||+++|+||||+|||||||||||+|||||||+||||+|++||+|++|+||||||+
T Consensus       179 Ae~~GA~~~~v~s~v~sav~~~s~gdi~TLTAaAATaLRGaa~Lk~R~~ke~~~~a~v~P~e~~  242 (242)
T PF05703_consen  179 AEAAGADRDQVASAVRSAVNVRSPGDIMTLTAAAATALRGAATLKARAQKEARSNAAVLPYEKG  242 (242)
T ss_pred             HHHhCCcHHHHHHHHHHHhcCCCchHHHHHHHHHHhcCchHHHHHHHHhhhhhcccccccCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999985

>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function Back     alignment and domain information
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis Back     alignment and domain information
>smart00233 PH Pleckstrin homology domain Back     alignment and domain information
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] Back     alignment and domain information
>cd00821 PH Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain Back     alignment and domain information
>cd00900 PH-like Pleckstrin homology-like domain Back     alignment and domain information
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain Back     alignment and domain information
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain Back     alignment and domain information
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain Back     alignment and domain information
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain Back     alignment and domain information
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain Back     alignment and domain information
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
2lul_A164 Tyrosine-protein kinase TEC; structural genomics, 94.71
1x1g_A129 Pleckstrin 2; PH domain, structural genomics, rike 94.66
2rlo_A128 Centaurin-gamma 1; split PH domain, alternative sp 94.56
1mai_A131 Phospholipase C delta-1; pleckstrin, inositol tris 94.09
1wg7_A150 Dedicator of cytokinesis protein 9; pleckstrin hom 93.4
3aj4_A112 Pleckstrin homology domain-containing family B ME; 93.17
2dn6_A115 KIAA0640 protein; PH domain, structural genomics, 92.59
2cod_A115 Centaurin-delta 1; ARF GAP and RHO GAP with ankyri 92.26
4h8s_A407 DCC-interacting protein 13-beta; BAR domain, pleck 92.22
2q13_A385 DCC-interacting protein 13 alpha; APPL1, BAR domai 92.13
2dkp_A128 Pleckstrin homology domain-containing family A mem 91.86
2d9y_A117 Pleckstrin homology domain-containing protein fami 91.73
1u5d_A108 SKAP55, SRC kinase-associated phosphoprotein of 55 91.13
1fao_A126 Dual adaptor of phosphotyrosine and 3- phosphoinos 90.33
2yry_A122 Pleckstrin homology domain-containing family A mem 90.29
2dhk_A119 TBC1 domain family member 2; PH domain, paris-1, s 90.14
3p6a_A377 RHO guanine nucleotide exchange factor 1; regulati 90.1
2i5f_A109 Pleckstrin; PH domain, protein-inositol phosphate 89.89
1v5u_A117 SBF1, SET binding factor 1; MTMR5, the pleckstrin 89.4
2d9v_A130 Pleckstrin homology domain-containing protein fami 89.39
1u5f_A148 SRC-associated adaptor protein; PH domain of SKAP- 88.71
1upq_A123 PEPP1; PH domain, phosphoinositide binding, signal 88.26
2d9x_A120 Oxysterol binding protein-related protein 11; PH d 88.18
1eaz_A125 Tandem PH domain containing protein-1; lipid-bindi 87.95
1wgq_A109 FYVE, rhogef and PH domain containing 6; ethanol d 87.87
2lg1_A185 A-kinase anchor protein 13; metal binding protein; 87.2
3mpx_A434 FYVE, rhogef and PH domain-containing protein 5; s 87.16
2da0_A114 130-kDa phosphatidylinositol 4,5-biphosphate- depe 86.76
1pls_A113 Pleckstrin homology domain; phosphorylation; NMR { 86.65
1btk_A169 Bruton'S tyrosine kinase; transferase, PH domain, 86.13
1x05_A129 Pleckstrin; PH domain, structural genomics, NPPSFA 85.79
2rsg_A94 Collagen type IV alpha-3-binding protein; pleckstr 85.67
1wjm_A123 Beta-spectrin III; PH domain, signal transduction, 83.46
3odw_A536 RHO guanine nucleotide exchange factor 1; regulati 83.04
2cof_A107 Protein KIAA1914; PH domain, structural genomics, 82.35
1btn_A106 Beta-spectrin; signal transduction protein; HET: I 82.11
1x1f_A149 Signal-transducing adaptor protein 1; docking prot 81.69
2j59_M168 RHO-GTPase activating protein 10; ARF, ARF1, ARFBD 80.89
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Back     alignment and structure
Probab=94.71  E-value=0.53  Score=39.62  Aligned_cols=98  Identities=16%  Similarity=0.164  Sum_probs=61.1

Q ss_pred             hcceeeeecCC----CceeEEEEEEEEcCccEEEEEeecc----ccccccccccceEEEeeccCCCCCCCcccccCCCcc
Q 018315          241 RGCELLKRTRK----GDLHWKIVSVYINRLNQVMLKMKSR----HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDR  312 (358)
Q Consensus       241 rG~eLlkrtrk----G~lhwk~VSVyink~~qV~LKmKSk----Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r  312 (358)
                      ++|-|+||...    +.--||.==+.+.. ++ +.==|++    ..-|.|.-..-.+|..|..+.+.-       ..+..
T Consensus        17 ~EG~L~Kr~~~kk~~~~knWKkRwFVL~~-~~-L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~-------~~~~~   87 (164)
T 2lul_A           17 LEEILIKRSQQKKKTSPLNYKERLFVLTK-SM-LTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVI-------PCQNK   87 (164)
T ss_dssp             EEEEEEEECCCCSSSCCCCEEEEEEEEES-SE-EEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSC-------CSSSC
T ss_pred             EEEEEEEecCCCCCCCCCCceeEEEEEEC-CE-EEEEeccCcccccccEEEEeeeEEEEeccccccCc-------ccccc
Confidence            67899999754    22358877666643 32 2222332    233444444334444444332111       11346


Q ss_pred             eeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315          313 RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV  348 (358)
Q Consensus       313 ~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~  348 (358)
                      ..|-|.|.+ +++-|.++|..+.+.|++.|+..+..
T Consensus        88 ~~f~i~t~~-rt~~l~A~s~~e~~~Wi~aL~~~i~~  122 (164)
T 2lul_A           88 YPFQVVHDA-NTLYIFAPSPQSRDLWVKKLKEEIKN  122 (164)
T ss_dssp             SEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             eeEEEecCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            678899888 89999999999999999999988754
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Back     alignment and structure
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Back     alignment and structure
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Back     alignment and structure
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} Back     alignment and structure
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Back     alignment and structure
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Back     alignment and structure
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Back     alignment and structure
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A Back     alignment and structure
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Back     alignment and structure
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Back     alignment and structure
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Back     alignment and structure
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Back     alignment and structure
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Back     alignment and structure
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* Back     alignment and structure
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Back     alignment and structure
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Back     alignment and structure
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A Back     alignment and structure
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Back     alignment and structure
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Back     alignment and structure
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1maia_119 Phospholipase C delta-1 {Rat (Rattus norvegicus) [ 97.55
d1x1ga1116 Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} 96.57
d1wg7a_150 Dedicator of cytokinesis protein 9, DOCK9 {Human ( 95.99
d2i5fa1104 Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} 95.55
d1v5ma_136 SH2 and PH domain-containing adapter protein APS { 95.36
d1u5fa1111 Src-associated adaptor protein Skap2 {Mouse (Mus m 95.26
d1upqa_107 Phosphoinositol 3-phosphate binding protein-1, PEP 95.05
d1zc3b1109 Exocyst complex protein EXO84 {Rat (Rattus norvegi 94.86
d2coda1102 Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 94.59
d1plsa_113 Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} 94.5
d1u5da1106 Src kinase-associated phosphoprotein SKAP55 (SCAP1 94.33
d1faoa_100 Dual adaptor of phosphotyrosine and 3-phosphoinosi 94.26
d1omwa2119 G-protein coupled receptor kinase 2 (beta-adrenerg 94.09
d1eaza_103 Tapp1 {Human (Homo sapiens) [TaxId: 9606]} 93.31
d1btka_169 Bruton's tyrosine kinase {Human (Homo sapiens) [Ta 93.28
d1wi1a_126 Calcium-dependent activator protein for secretion, 93.11
d1v5ua_117 SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ 93.05
d1txda2114 Rho guanine nucleotide exchange factor 12 {Human ( 93.0
d1v89a_118 Rho-GTPase-activating protein 25 (KIAA0053) {Human 92.53
d1dbha2133 Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ 92.32
d2elba2101 DCC-interacting protein 13-alpha, APPL1 {Human (Ho 91.91
d1wgqa_109 FYVE, RhoGEF and PH domain containing protein 6, F 90.66
d1u5ea1209 Src-associated adaptor protein Skap2 {Mouse (Mus m 90.16
d1v61a_132 Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ 89.73
d1droa_122 beta-spectrin {Fruit fly (Drosophila melanogaster) 89.37
d1ntya2121 Triple functional domain protein TRIO {Human (Homo 89.31
d2dfka2162 Rho guanine nucleotide exchange factor 9, Collybis 89.09
d1qqga1103 Insulin receptor substrate 1, IRS-1 {Human (Homo s 89.01
d1v5pa_126 Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} 88.83
d1unqa_118 Rac-alpha serine/threonine kinase {Human (Homo sap 88.15
d2j59m1133 Rho GTPase-activating protein 21 {Human (Homo sapi 85.64
d2fjla1101 Phosphoinositide phospholipase C, PLC-gamma-1 {Rat 83.81
d2coca199 FYVE, RhoGEF and PH domain containing protein 3, F 83.77
d1wjma_123 beta-spectrin {Human (Homo sapiens), brain 2 isofo 82.19
d2zkmx3131 Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI 81.92
d1xcga2140 Rho guanine nucleotide exchange factor 11, PDZ-Rho 81.38
d2cofa195 KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} 80.19
>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.55  E-value=0.0002  Score=55.24  Aligned_cols=104  Identities=15%  Similarity=0.217  Sum_probs=64.7

Q ss_pred             hhHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceE----EEeeccC--CCCCCCcccccCC
Q 018315          236 RELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNV----VLEVIPD--MPAWPGRHLLEGG  309 (358)
Q Consensus       236 ~~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~V----V~dV~~~--ipAWpgr~l~e~~  309 (358)
                      ...|.+|+.|+|.++++.  ++.--++++.+++.+. =++..-  ...++++.|    |..|...  .+..  +..-+..
T Consensus         8 l~~l~~G~~l~K~~~~~~--~k~R~f~L~~d~~~i~-~~~~~~--~~~~~~~~i~i~~I~~V~~G~~s~~~--~~~~~~~   80 (119)
T d1maia_           8 LQALLKGSQLLKVKSSSW--RRERFYKLQEDCKTIW-QESRKV--MRSPESQLFSIEDIQEVRMGHRTEGL--EKFARDI   80 (119)
T ss_dssp             HHHHHHCEEEEEESSSSC--EEEEEEEECTTSSEEE-ECCCCT--TCCTTTTEEEGGGEEEEEESSCSHHH--HHHCTTS
T ss_pred             HHHHHcCCeEEEeCCCCC--CEEEEEEEcCCCCEEE-EeCCCC--CCCccceEEEHHHceEEEcCCCCchh--hhcccCC
Confidence            467899999999999883  3445578888887774 333211  122222222    3333321  1110  1111122


Q ss_pred             CcceeEEEe--ecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315          310 EDRRYFGLK--TVLRGVVEFECRSQREYDIWTQGVARLLN  347 (358)
Q Consensus       310 e~r~YFglk--Ta~~GvvEFec~s~~~~q~W~~gI~~lL~  347 (358)
                      .+.++|-|.  |.. ..+.|.|.|+.+.+.|+++|+.||.
T Consensus        81 ~~~~~FsIv~~~~~-r~l~l~a~s~~~~~~Wv~~L~~L~~  119 (119)
T d1maia_          81 PEDRCFSIVFKDQR-NTLDLIAPSPADAQHWVQGLRKIIH  119 (119)
T ss_dssp             CGGGEEEEEESSSC-CCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             CcCceEEEEEcCCC-cEEEEEECCHHHHHHHHHHHHHHhC
Confidence            456778664  554 7899999999999999999999973
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Back     information, alignment and structure
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Back     information, alignment and structure
>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure