Citrus Sinensis ID: 018342

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
Protein Sequence
MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHccccccccccccccccccEEEcccccccccccccccccccEEEEEEEEcccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEEEEEEEHEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGSTSTALMAHLRLSYgcfskrhepirnrmnsvkvnsssklrfgvsrsRRRFEDALVCFaafdgddardnqpelgssggvgsavedrpdvtdiprdetlenlnqdgvesplynflypdkellpddkemSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFleapvksegvrflqlapgeffFTTLKVSGYcglllgspVILYEIIAFVLPGLTRAERRFLgpivlgssVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAavltpstdpvTQMLLAAPLLGLYFGGAWMVKLTGR
Flexible Loop (DISEMBL)
MGSTSTALMAHLRLSYGCFskrhepirnrmnsvkvnsssklrfgvsrsrrrFEDALVCFAAFDGDDARDNQPElgssggvgsavedrpdVTDIPRDETlenlnqdgvespLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Low Complexity Region (SEG)
MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIqlllgqvglvTSDQMLSIWRYvvvgaviaaavLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Disordered region (IsUnstruct)
********MAHLRLSYGCFS******************************RFEDALVCFAAFD**********************************************PLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL***
Disordered Region (DISOPRED)
**********************************************************************************************************************************FDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Disordered Region (DISEMBL)
MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Disordered Region (DISPRO)
*****TALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGD***********************************************NFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	357	2.2.26 [Sep-21-2011]
Q9SJV5	340	Sec-independent protein t	yes	no	0.929	0.976	0.721	1e-129
Q94G17	353	Sec-independent protein t	N/A	no	0.927	0.937	0.730	1e-126
Q9AVE6	359	Sec-independent protein t	yes	no	0.851	0.846	0.771	1e-115
C4IZX0	356	Sec-independent protein t	N/A	no	0.857	0.859	0.757	1e-108
P54086	254	Sec-independent protein t	N/A	no	0.655	0.921	0.618	1e-81
Q6B8S9	238	Uncharacterized tatC-like	N/A	no	0.647	0.970	0.480	3e-66
O78493	290	Uncharacterized tatC-like	yes	no	0.633	0.779	0.504	6e-62
P51264	254	Uncharacterized tatC-like	N/A	no	0.689	0.968	0.458	2e-60
Q9TLS5	239	Uncharacterized tatC-like	N/A	no	0.641	0.958	0.467	9e-57
Q1XDM3	254	Uncharacterized tatC-like	N/A	no	0.675	0.948	0.458	3e-56

>sp|Q9SJV5|TATC_ARATH Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana GN=TATC PE=1 SV=2

 Score =  461 bits (1186), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/359 (72%), Positives = 290/359 (80%), Gaps = 27/359 (7%)

Query: 3   STSTALMAHLRLS---YGCFSKRHEPIR-NRMNSVKVNSSSKLRFGVSRSRRRFEDALVC 58
           STS+AL+ H RL+    G  +K+  P      NS +    + LR+ V++ R +       
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWR---EAGLRYSVTQRRSK---GFGP 58

Query: 59  FAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPD 118
            +A + DD+        ++ GVGSAVEDRP   D   D +          S +Y FLYP 
Sbjct: 59  VSALNDDDSPTE-----TTPGVGSAVEDRPP--DSSEDRS----------SSVYEFLYPR 101

Query: 119 KELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFL 178
           KE LPDDKEM+IFDHLEELR+RIFVSVLAVGAAILGCFA+SK+LI+FLEAPVK++GVRFL
Sbjct: 102 KEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFL 161

Query: 179 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYA 238
           QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYA
Sbjct: 162 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYA 221

Query: 239 GIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 298
           G+AFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ
Sbjct: 222 GLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 281

Query: 299 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           VG+V+ DQMLSIWRYVVVGAV+AAAV+TPSTDPVTQMLLA PLLGLY GGAWMVKLTGR
Sbjct: 282 VGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q94G17|TATC_PEA Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum GN=TATC PE=1 SV=1

 Score =  451 bits (1160), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/334 (73%), Positives = 281/334 (84%), Gaps = 3/334 (0%)

Query: 27  RNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVED 86
           R  +N ++VN+S+   + +S  + +  D LVCFA  D    +  Q    SS  +GSAVE+
Sbjct: 20  RTHLNPIRVNNSTGFSYPLSLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEE 79

Query: 87  RP---DVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFV 143
           RP   D+ D   +E LEN  +DG  S +Y+FLYP KELLPDDKEMSIFDHLEELR+RIF+
Sbjct: 80  RPENKDMIDGISEEALENFKEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFI 139

Query: 144 SVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP 203
           SVL VG +ILGCFA+SK+L+  LEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP
Sbjct: 140 SVLGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP 199

Query: 204 VILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVV 263
           +ILYEIIAF++PGLT+ ER+FLGPIVLGSSVLFYAGI FSY VL PAALNFFVNYAEG V
Sbjct: 200 IILYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAV 259

Query: 264 ESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAA 323
           ESLWSIDQYFEFVLVLMFSTGLSFQVP+IQLLLGQ+GLV+ D+MLS+WRYVVVGAV+AAA
Sbjct: 260 ESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAA 319

Query: 324 VLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           V+TPSTDP+TQ+LLAAPLLGLY GGAWMVKL GR
Sbjct: 320 VVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 353

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Pisum sativum (taxid: 3888)

>sp|Q9AVE6|TATC_ORYSJ Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1

 Score =  413 bits (1062), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/315 (77%), Positives = 263/315 (83%), Gaps = 11/315 (3%)

Query: 51  RFEDALVCFAAFDGDDARDN--------QPELGSSGGVGSAVEDRPDVTDIPRDETLENL 102
           R    L C AA DG   R+         Q E   SG +G+A+ED P    + ++ +   +
Sbjct: 48  RHGRHLRC-AAVDGGAGRETERPSPPAPQREESPSGSLGAALED-PSPQPV-QNGSFGGI 104

Query: 103 NQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKEL 162
            +D  +S LYNFLYP KELLPDDKEMSIFDHLEELR RIFVSVLAVGAAILGCFAYSK+L
Sbjct: 105 TEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDL 164

Query: 163 IMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 222
           I  LEAPV  +GVRFLQL+PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER
Sbjct: 165 IRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDER 224

Query: 223 RFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFS 282
           +FLGPIVLGSSVLFY GI FSY VL PAALNFFVNYA+G VESLWSIDQYFEFVLVL+FS
Sbjct: 225 KFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFS 284

Query: 283 TGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLL 342
           TGLSFQVPVIQLLLGQVGLV+SDQMLSIWRYVVVGAV+AAAVLTPSTDP+TQMLLA PLL
Sbjct: 285 TGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLL 344

Query: 343 GLYFGGAWMVKLTGR 357
           GLY GGAWMVKLTGR
Sbjct: 345 GLYLGGAWMVKLTGR 359

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1

 Score =  393 bits (1009), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/313 (75%), Positives = 269/313 (85%), Gaps = 7/313 (2%)

Query: 49  RRRFEDALVCFAAFDGDDA-RDNQP---ELGSSGGVGSAVEDRPDVTDIPRDETLENLNQ 104
            RR    L C AA DGD A R++ P   +   S G+G+A+ED P    +  + +    +Q
Sbjct: 47  ERRRRQCLRC-AAVDGDGALRESGPLPQKESPSSGIGAALEDPPPGPPV-ENGSFGGPSQ 104

Query: 105 DGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIM 164
           +  +S LY FLYP K+LLPDDKEMSIFDHLEELR RIF+SVLAVGAAILGCFA+SK+L++
Sbjct: 105 EE-QSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVI 163

Query: 165 FLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRF 224
           FLEAPV ++GVRFLQL+PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+F
Sbjct: 164 FLEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKF 223

Query: 225 LGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTG 284
           LGPIVLGSSVLFY GI FSY VL+PAALNFFVNYA+G VESLWSIDQYFEF+LVLMFSTG
Sbjct: 224 LGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTG 283

Query: 285 LSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGL 344
           LSFQVPVIQLLLGQ+GLV+SDQMLSIWRYVVVGAV+AAAVLTPSTDP+TQMLLA PLLGL
Sbjct: 284 LSFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGL 343

Query: 345 YFGGAWMVKLTGR 357
           Y GGAWMVK+TGR
Sbjct: 344 YLGGAWMVKITGR 356

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

Zea mays (taxid: 4577)

>sp|P54086|TATC_SYNY3 Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1

 Score =  303 bits (776), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 146/236 (61%), Positives = 193/236 (81%), Gaps = 2/236 (0%)

Query: 122 LPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLA 181
           +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF + K L+ +L+ P  +  V+FLQL+
Sbjct: 21  VPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLS 78

Query: 182 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 241
           PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG+ 
Sbjct: 79  PGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAGLG 138

Query: 242 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 301
           F+Y+ L PAAL FFV+Y   VVE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG +G+
Sbjct: 139 FAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFLGI 198

Query: 302 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           V+S+QML  WR+V++GA++  A+LTPSTDP+TQ LLA  +LGLYFGG   V+L G+
Sbjct: 199 VSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q6B8S9|YCF43_GRATL Uncharacterized tatC-like protein ycf43 OS=Gracilaria tenuistipitata var. liui GN=ycf43 PE=3 SV=1

 Score =  252 bits (643), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 112/233 (48%), Positives = 170/233 (72%), Gaps = 2/233 (0%)

Query: 125 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGE 184
           + EMSIF+HLEELRQRIF++ L        CF Y K +   L+ P  + G++FLQLAPGE
Sbjct: 8   NTEMSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQP--AIGIKFLQLAPGE 65

Query: 185 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 244
           + FT++KV+ Y G LL SP I+Y+I  F+LPGLT+ E  F+ PI+  S +LF++GI F+Y
Sbjct: 66  YLFTSIKVALYSGFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFAY 125

Query: 245 WVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 304
            +L PAAL F +NY   +VE +WS +QYF F+L+L+FSTG++FQ+P+IQ++LG + + +S
Sbjct: 126 IILVPAALKFLINYGNEIVEPIWSFEQYFNFILLLLFSTGIAFQIPIIQVILGILKIFSS 185

Query: 305 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
            +M + W+Y+V+GA + AA++TPSTDP+TQ++++  +L LY  G  ++K+  +
Sbjct: 186 SEMYAYWKYIVLGATVIAAIITPSTDPITQIIMSIAILALYSSGIIILKILNK 238

Gracilaria tenuistipitata var. liui (taxid: 285951)

>sp|O78493|YCF43_GUITH Uncharacterized tatC-like protein ycf43 OS=Guillardia theta GN=ycf43 PE=3 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 115/228 (50%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 125 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGE 184
           + EMS+ +HLEE+RQR F S   +   I+ C  + K ++  L+ P  + G++FLQ APGE
Sbjct: 54  EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEP--AAGIKFLQFAPGE 111

Query: 185 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 244
           +FF ++KV+ Y G+L+ SP I+Y+I+ FVLPG+T+ ER+ L PI++GS +LF  G+ F Y
Sbjct: 112 YFFASIKVAAYSGILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIFGY 171

Query: 245 WVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 304
           ++L PA+LNFF+ Y   VVE  WS +QYFEF+LVL+F T L+FQ+PV+QL+LG + +V+ 
Sbjct: 172 YILVPASLNFFIKYGSDVVEPFWSFEQYFEFILVLLFGTALAFQLPVLQLVLGFLRIVSG 231

Query: 305 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMV 352
             M SIWRYV++ + +  AVLTPS DP+TQ+LL++ +L LYFGGA +V
Sbjct: 232 KTMFSIWRYVILLSTVVGAVLTPSVDPLTQILLSSIILILYFGGASLV 279

Guillardia theta (taxid: 55529)

>sp|P51264|YCF43_PORPU Uncharacterized tatC-like protein ycf43 OS=Porphyra purpurea GN=ycf43 PE=3 SV=1

 Score =  233 bits (594), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/262 (45%), Positives = 182/262 (69%), Gaps = 16/262 (6%)

Query: 94  PRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQR-IFVSVLAVGAAI 152
           P++  L N+N +    P             +D  MSI +HLEELRQR +FV +  + AA 
Sbjct: 5   PQNNLLANINTNSENLP------------ENDVPMSITEHLEELRQRTVFVFIFFLLAAT 52

Query: 153 LGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAF 212
           +  F   K ++   +AP  + G++FLQLAPGE+FF+++K++ YCG++  +P  +Y++I +
Sbjct: 53  IS-FTQIKIIVEIFQAP--AIGIKFLQLAPGEYFFSSIKIAIYCGIVATTPFGVYQVILY 109

Query: 213 VLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQY 272
           +LPGLT  ER+ + PI++GS VLF  G  F+Y+VL PAALNF ++Y   +VE LWS +QY
Sbjct: 110 ILPGLTNKERKVILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQY 169

Query: 273 FEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPV 332
           F+F+L+L+FSTGL+F++P+IQLLLG  G V++ QML  WRY+++ + I  AVLTPSTDPV
Sbjct: 170 FDFILLLLFSTGLAFEIPIIQLLLGISGTVSASQMLLAWRYIIIISTIIGAVLTPSTDPV 229

Query: 333 TQMLLAAPLLGLYFGGAWMVKL 354
           TQ+++++ +L LYF G  ++ L
Sbjct: 230 TQIIMSSAVLALYFSGVIILFL 251

Porphyra purpurea (taxid: 2787)

>sp|Q9TLS5|YCF43_CYACA Uncharacterized tatC-like protein ycf43 OS=Cyanidium caldarium GN=ycf43 PE=3 SV=1

 Score =  221 bits (562), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 108/231 (46%), Positives = 169/231 (73%), Gaps = 2/231 (0%)

Query: 124 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 183
           D  +MSI++HLEELRQR   S++A+  +++ C      LI  ++ P  + G++FLQL+PG
Sbjct: 8   DSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQP--AIGIKFLQLSPG 65

Query: 184 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 243
           E+FFT++K++ Y G++L SP+I YEII F++PGLT+ ERR L PI++ S  LF AG+ F 
Sbjct: 66  EYFFTSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIFG 125

Query: 244 YWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVT 303
           Y  +TP A+ FF+NY + ++E +WS  +YF+F+++ +FST +SFQ+P+ Q+LLG + ++ 
Sbjct: 126 YIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGSLKIIN 185

Query: 304 SDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 354
           S  MLS+WRYVVVG+ I +A++TPSTDP+ Q+ L+  ++ LYF    ++KL
Sbjct: 186 SKMMLSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKL 236

Cyanidium caldarium (taxid: 2771)

>sp|Q1XDM3|YCF43_PORYE Uncharacterized tatC-like protein ycf43 OS=Porphyra yezoensis GN=ycf43 PE=3 SV=1

 Score =  219 bits (557), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/255 (45%), Positives = 173/255 (67%), Gaps = 14/255 (5%)

Query: 94  PRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAIL 153
           P++  L N N D V+ P             +D  MSI +HLEELRQR     L    A  
Sbjct: 5   PQNNLLTNENIDHVDIP------------ENDIPMSITEHLEELRQRTLFVFLFFLFATT 52

Query: 154 GCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFV 213
             F   K ++  L+AP  + G++FLQLAPGE+FF+++KV+ YCG++  +P  +Y++I ++
Sbjct: 53  ISFTQIKIIVAILQAP--AVGIKFLQLAPGEYFFSSIKVAIYCGIVATTPFAVYQVILYI 110

Query: 214 LPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYF 273
           LPGLT  ER+ + P+++ S +LF  G  F+Y+VL PAAL F ++Y   +VE LWS +QYF
Sbjct: 111 LPGLTGKERKIILPLLISSVLLFITGGIFAYFVLAPAALTFLISYGSDIVEPLWSFEQYF 170

Query: 274 EFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVT 333
           +F+L+L+ STGL+F++P+IQLLLG  G  +S QM+  WRY+++ A IA A+LTPSTDPVT
Sbjct: 171 DFILLLLLSTGLAFEIPIIQLLLGVSGTFSSSQMIRAWRYIIIIATIAGAILTPSTDPVT 230

Query: 334 QMLLAAPLLGLYFGG 348
           Q+++++ +L LYFGG
Sbjct: 231 QLIMSSAVLLLYFGG 245

Porphyra yezoensis (taxid: 2788)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
356575606	344	PREDICTED: sec-independent protein trans	0.890	0.924	0.775	1e-132
356536260	346	PREDICTED: sec-independent protein trans	0.871	0.898	0.783	1e-130
449493436	347	PREDICTED: sec-independent protein trans	0.963	0.991	0.725	1e-130
255639374	343	unknown [Glycine max]	0.871	0.906	0.784	1e-130
449434578	347	PREDICTED: sec-independent protein trans	0.963	0.991	0.725	1e-130
25312108	327	TATC-like protein [imported] - Arabidops	0.876	0.957	0.778	1e-128
297817696	339	hypothetical protein ARALYDRAFT_484017 [	0.932	0.982	0.713	1e-127
225424126	352	PREDICTED: sec-independent protein trans	0.983	0.997	0.748	1e-127
255582927	340	Sec-independent protein translocase prot	0.941	0.988	0.736	1e-127
147819072	352	hypothetical protein VITISV_043107 [Viti	0.983	0.997	0.748	1e-127

>gi|356575606|ref|XP_003555930.1| PREDICTED: sec-independent protein translocase protein TatC-like [Glycine max]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/329 (77%), Positives = 281/329 (85%), Gaps = 11/329 (3%)

Query: 33  VKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSG-GVGSAVEDRPDVT 91
           ++V + S L F      R+  +  VCFA    D+ R  Q +L ++  G+GSA+E+RP  T
Sbjct: 23  IRVGNPSGLSF-----LRKRNNGFVCFAV--DDELRQKQQDLSTTATGLGSALEERPGNT 75

Query: 92  DI---PRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAV 148
           D+     +ET  N  QDG   P+YNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAV
Sbjct: 76  DLFESTTEETQGNFRQDGEPGPIYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAV 135

Query: 149 GAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYE 208
           GA+ILGCFA+SKELIM LEAPVKS+GVRFLQLAPGEFFFTTLKVSGYCGLLLG PVILYE
Sbjct: 136 GASILGCFAFSKELIMILEAPVKSQGVRFLQLAPGEFFFTTLKVSGYCGLLLGIPVILYE 195

Query: 209 IIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWS 268
           IIAFVLPGLT+AERRFLGPIVLGSSVLFYAGI FSY VLTPAALNFFV YAEG VESLWS
Sbjct: 196 IIAFVLPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESLWS 255

Query: 269 IDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPS 328
           IDQYFEFVLVLMFSTGLSFQVPVIQ LLGQ+GLV+ DQMLSIWRYVVVGAV+AAA++TPS
Sbjct: 256 IDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPS 315

Query: 329 TDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           TDP+TQ+LLAAPLLGLY GGAWMVKLTGR
Sbjct: 316 TDPLTQVLLAAPLLGLYLGGAWMVKLTGR 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536260|ref|XP_003536657.1| PREDICTED: sec-independent protein translocase protein TatC-like [Glycine max]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/318 (78%), Positives = 278/318 (87%), Gaps = 7/318 (2%)

Query: 44  GVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSG-GVGSAVEDRPDVTDI---PRDETL 99
           G+S  R+R  ++ VC A    D+ R  Q +L +S  G+GSA+E+RP+  D+     +ET 
Sbjct: 32  GLSFPRKR-NNSFVCLAV--DDELRQKQQDLSTSATGLGSALEERPENADLFESTAEETQ 88

Query: 100 ENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYS 159
            N  QDG    +Y+FLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGA+ILGCFA+S
Sbjct: 89  GNFGQDGDRGAIYDFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGASILGCFAFS 148

Query: 160 KELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR 219
           KELIM LEAPVK++GVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYE+IAFVLPGLT+
Sbjct: 149 KELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEVIAFVLPGLTK 208

Query: 220 AERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVL 279
           +ERRFLGPIVLGSSVLFYAGI FSY VLTPAALNFFV YAEG VESLWSIDQYFEFVLVL
Sbjct: 209 SERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESLWSIDQYFEFVLVL 268

Query: 280 MFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAA 339
           MFSTGLSFQVPVIQ LLGQ+GLV+ DQMLSIWRYVVVGAV+AAA++TPSTDP+TQ+LLAA
Sbjct: 269 MFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQILLAA 328

Query: 340 PLLGLYFGGAWMVKLTGR 357
           PLLGLY GGAWMVKLTGR
Sbjct: 329 PLLGLYLGGAWMVKLTGR 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493436|ref|XP_004159288.1| PREDICTED: sec-independent protein translocase protein TATC, chloroplastic-like [Cucumis sativus]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/360 (72%), Positives = 299/360 (83%), Gaps = 16/360 (4%)

Query: 1   MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSS---SKLRFGVSRSRRRFEDALV 57
           MGS S AL +HL+LS   FS R    ++++ SV+++ +   +KLRF     RR F +  V
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTS--QSQLTSVRISPTLRRTKLRFTGLLRRRNF-NRFV 57

Query: 58  CFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYP 117
           C A    DD R+ Q ELG  GG GS V +  DV DI ++ T   L++    S +YNFLYP
Sbjct: 58  CSAV--DDDVREKQTELG--GGNGSTVVE--DVPDIAKNSTNGALDK----SDIYNFLYP 107

Query: 118 DKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRF 177
            K+LLPDD+EMS+FDHLEELRQRIFVSVLAVGAAI+GCFA+SK+LI+ LEAPVK +GVRF
Sbjct: 108 SKDLLPDDREMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRF 167

Query: 178 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 237
           LQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 168 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 227

Query: 238 AGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 297
           AGIAFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLG
Sbjct: 228 AGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLG 287

Query: 298 QVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           Q+GLV+ DQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ+LLAAPLLGLY GGAW+VKL+GR
Sbjct: 288 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639374|gb|ACU19983.1| unknown [Glycine max]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/315 (78%), Positives = 276/315 (87%), Gaps = 4/315 (1%)

Query: 44  GVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSG-GVGSAVEDRPDVTDIPRDETLENL 102
           G+S  R+R  ++ VC A    D+ R  Q +L +S  G+GSA+E+RPD+ +    ET  N 
Sbjct: 32  GLSFPRKR-NNSFVCLAV--DDELRQKQQDLSTSATGLGSALEERPDLFESTAVETQGNF 88

Query: 103 NQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKEL 162
            QDG    +Y+FLYPDKE LPDDKEMSIFDHLEELRQRIFVSVLAVGA+ILGCFA+SKEL
Sbjct: 89  GQDGDRGAIYDFLYPDKEFLPDDKEMSIFDHLEELRQRIFVSVLAVGASILGCFAFSKEL 148

Query: 163 IMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 222
           IM LEAPVK++GVRFLQLAPGEFFFTTLKVSG+CGLLLGSPVILYE+IAFVLPGLT++ER
Sbjct: 149 IMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGHCGLLLGSPVILYEVIAFVLPGLTKSER 208

Query: 223 RFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFS 282
           RFLGPIVLGSSVLFYAGI FSY VLTPAALNFFV YAEG VESLWSIDQYFEFVLVLMFS
Sbjct: 209 RFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESLWSIDQYFEFVLVLMFS 268

Query: 283 TGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLL 342
           TGLSFQVPVIQ LLGQ+GLV+ DQMLSIWRYVVVGAV+AAA++TPSTDP+TQ+LLAAPLL
Sbjct: 269 TGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQILLAAPLL 328

Query: 343 GLYFGGAWMVKLTGR 357
           GLY GGAWMVKLTGR
Sbjct: 329 GLYLGGAWMVKLTGR 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434578|ref|XP_004135073.1| PREDICTED: sec-independent protein translocase protein TATC, chloroplastic-like [Cucumis sativus]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/360 (72%), Positives = 298/360 (82%), Gaps = 16/360 (4%)

Query: 1   MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSS---SKLRFGVSRSRRRFEDALV 57
           MGS S AL +HL+LS   FS R    ++++ SV+++ +   +KLRF     RR F +  V
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTS--QSQLTSVRISPTLRRTKLRFTGLLRRRNF-NRFV 57

Query: 58  CFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYP 117
           C A    DD R+ Q ELG  GG GS V +  DV DI ++ T    N    +S +YNFLYP
Sbjct: 58  CSAV--DDDVREKQTELG--GGNGSTVVE--DVPDIAKNST----NGAPDKSDIYNFLYP 107

Query: 118 DKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRF 177
            K+LLPDD+EMS+FDHLEELRQRIFVSVLAVGAAI+GCFA+SK+LI+ LEAPVK +GVRF
Sbjct: 108 SKDLLPDDREMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRF 167

Query: 178 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 237
           LQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 168 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 227

Query: 238 AGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 297
           AGIAFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLG
Sbjct: 228 AGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLG 287

Query: 298 QVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           Q+GLV+ DQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ+LLAAPLLGLY GGAW+VKL+GR
Sbjct: 288 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|25312108|pir||G84420 TATC-like protein [imported] - Arabidopsis thaliana

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/320 (77%), Positives = 272/320 (85%), Gaps = 7/320 (2%)

Query: 38  SSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDE 97
           SS  R   +  + R   +L   A  D D   +  P      GVGSAVEDRP V+D     
Sbjct: 15  SSFARAARAEKQHRVVASLRDRALNDDDSPTETTP------GVGSAVEDRPPVSDELHTA 68

Query: 98  TLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFA 157
            + + ++D   S +Y FLYP KE LPDDKEM+IFDHLEELR+RIFVSVLAVGAAILGCFA
Sbjct: 69  AVADSSEDR-SSSVYEFLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFA 127

Query: 158 YSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGL 217
           +SK+LI+FLEAPVK++GVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGL
Sbjct: 128 FSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGL 187

Query: 218 TRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVL 277
           TRAERRFLGPIV GSS+LFYAG+AFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVL
Sbjct: 188 TRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVL 247

Query: 278 VLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLL 337
           VLMFSTGLSFQVPVIQLLLGQVG+V+ DQMLSIWRYVVVGAV+AAAV+TPSTDPVTQMLL
Sbjct: 248 VLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLL 307

Query: 338 AAPLLGLYFGGAWMVKLTGR 357
           A PLLGLY GGAWMVKLTGR
Sbjct: 308 ATPLLGLYLGGAWMVKLTGR 327

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class: N/A

Phylum: Streptophyta

>gi|297817696|ref|XP_002876731.1| hypothetical protein ARALYDRAFT_484017 [Arabidopsis lyrata subsp. lyrata] gi|297322569|gb|EFH52990.1| hypothetical protein ARALYDRAFT_484017 [Arabidopsis lyrata subsp. lyrata]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/363 (71%), Positives = 287/363 (79%), Gaps = 30/363 (8%)

Query: 1   MGSTST--ALMAHLRLSYGCFSKRHEPIRNR----MNSVKVNSSSKLRFGVSRSRRRFED 54
           MGSTST  AL+ H  L+    +    P + R    +N       + LR+ V++ R +   
Sbjct: 1   MGSTSTSSALIHHFPLTTRNLAS---PTKQRPPYAVNFCNSWREAGLRYSVTQRRSKGFG 57

Query: 55  ALVCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNF 114
            +        DD  D+ P    + GVGSAVEDRP   D   D +          S +Y F
Sbjct: 58  RVAAL-----DDNSDDSP----TPGVGSAVEDRP--PDASEDRS----------SSVYEF 96

Query: 115 LYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEG 174
           LYP KE LPDDKEM+IFDHLEELR+RIFVSVLAVGAAILGCFA+SK+LI+FLEAPVK++G
Sbjct: 97  LYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQG 156

Query: 175 VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSV 234
           VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+
Sbjct: 157 VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSL 216

Query: 235 LFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQL 294
           LFYAG+AFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQL
Sbjct: 217 LFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQL 276

Query: 295 LLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 354
           LLGQVG+V+ DQMLSIWRYVVVGAV+ AAV+TPSTDPVTQMLLA PLLGLY GGAWMVKL
Sbjct: 277 LLGQVGVVSGDQMLSIWRYVVVGAVVVAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKL 336

Query: 355 TGR 357
           TGR
Sbjct: 337 TGR 339

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424126|ref|XP_002282901.1| PREDICTED: sec-independent protein translocase protein TatC [Vitis vinifera] gi|297737744|emb|CBI26945.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/358 (74%), Positives = 296/358 (82%), Gaps = 7/358 (1%)

Query: 1   MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVS-RSRRRFEDALVCF 59
           MGSTS    + LR++  CF  +  PIR+    ++++      FG S R R R    LVC 
Sbjct: 1   MGSTS-GFFSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCS 59

Query: 60  AAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDK 119
           A    DDARD Q +LG  GGVGS VE+RP   D   D TL+N++QD  E+ LY+FLYP K
Sbjct: 60  AV--EDDARDKQQQLG--GGVGSIVEERPVAEDSGED-TLQNVDQDKKENGLYDFLYPSK 114

Query: 120 ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQ 179
           ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAA+LG FA+SKEL+M LEAPVK +GVRFLQ
Sbjct: 115 ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQ 174

Query: 180 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 239
           LAPGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLT+AER FLGPIVLGSSVLFYAG
Sbjct: 175 LAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAG 234

Query: 240 IAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQV 299
           I FSY +LTPAALNFFVNYAEG VESLWSIDQYFEFV VLMFSTGLSFQVPVIQLLLGQV
Sbjct: 235 IIFSYSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQV 294

Query: 300 GLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           G+V+ DQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ+LLA PLLGLY GGAWMVKL GR
Sbjct: 295 GVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582927|ref|XP_002532235.1| Sec-independent protein translocase protein tatC, putative [Ricinus communis] gi|223528092|gb|EEF30166.1| Sec-independent protein translocase protein tatC, putative [Ricinus communis]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/361 (73%), Positives = 300/361 (83%), Gaps = 25/361 (6%)

Query: 1   MGSTSTALMAHLRLSYGCFSKRHEPIRNRMN---SVKVNSS-SKLRFGVSRSRRRFEDAL 56
           MGS STA++ +L+L + CF K+ E  RN+ +   S+++NS+  +LRF  SR+ RR    +
Sbjct: 1   MGS-STAIIPYLQL-HNCFCKQFEITRNQQHFTSSLQLNSTRGRLRFSSSRNTRRL-SRV 57

Query: 57  VCFAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLY 116
           VC AA D D     + +  ++  +GSA+EDRP+                   S LYNFLY
Sbjct: 58  VCLAAVDDDITEKQKQDSPTTSSLGSALEDRPE------------------GSALYNFLY 99

Query: 117 PDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVR 176
           P+KELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFA+SKELIM LEAPVK +GVR
Sbjct: 100 PNKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIMVLEAPVKVQGVR 159

Query: 177 FLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 236
           FLQLAPGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF
Sbjct: 160 FLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 219

Query: 237 YAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLL 296
           YAGI FSY +LTPAALNFFV+YAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LL
Sbjct: 220 YAGIIFSYLILTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLL 279

Query: 297 GQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTG 356
           GQVGLV+ DQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ+LLA PLLGLY GGAW+VKLTG
Sbjct: 280 GQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWVVKLTG 339

Query: 357 R 357
           R
Sbjct: 340 R 340

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819072|emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/358 (74%), Positives = 296/358 (82%), Gaps = 7/358 (1%)

Query: 1   MGSTSTALMAHLRLSYGCFSKRHEPIRNRMNSVKVNSSSKLRFGVS-RSRRRFEDALVCF 59
           MGSTS    + LR++  CF  +  PIR+    ++++      FG S R R R    LVC 
Sbjct: 1   MGSTS-GXFSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCS 59

Query: 60  AAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDK 119
           A    DDARD Q +LG  GGVGS VE+RP   D   D TL+N++QD  E+ LY+FLYP K
Sbjct: 60  AV--EDDARDKQQQLG--GGVGSXVEERPVAEDSGED-TLQNVDQDKKENGLYDFLYPSK 114

Query: 120 ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQ 179
           ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAA+LG FA+SKEL+M LEAPVK +GVRFLQ
Sbjct: 115 ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQ 174

Query: 180 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 239
           LAPGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLT+AER FLGPIVLGSSVLFYAG
Sbjct: 175 LAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAG 234

Query: 240 IAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQV 299
           I FSY +LTPAALNFFVNYAEG VESLWSIDQYFEFV VLMFSTGLSFQVPVIQLLLGQV
Sbjct: 235 IIFSYSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQV 294

Query: 300 GLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           G+V+ DQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ+LLA PLLGLY GGAWMVKL GR
Sbjct: 295 GVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
UNIPROTKB|Q94G17	353	TATC "Sec-independent protein	0.927	0.937	0.673	3.4e-116
TAIR|locus:2045750	340	APG2 "ALBINO AND PALE GREEN 2"	0.929	0.976	0.674	3.6e-112
TIGR_CMR|CHY_0863	243	CHY_0863 "sec-independent prot	0.621	0.913	0.310	9.1e-29
UNIPROTKB|Q9KVQ3	250	VC_0088 "Putative uncharacteri	0.649	0.928	0.322	3.9e-28
TIGR_CMR|CPS_0165	255	CPS_0165 "Sec-independent peri	0.616	0.862	0.320	3.9e-28
TIGR_CMR|VC_0088	250	VC_0088 "conserved hypothetica	0.649	0.928	0.322	3.9e-28
TIGR_CMR|CPS_3043	252	CPS_3043 "Sec-independent peri	0.607	0.861	0.319	8.2e-28
TIGR_CMR|DET_1599	261	DET_1599 "Sec-independent prot	0.694	0.950	0.308	1.3e-27
NCBI_NP|NP_354692.1	267	tatC "SEC-independent protein	0.652	0.872	0.317	5.2e-26
UNIPROTKB|P69423	258	tatC [Escherichia coli K-12 (t	0.596	0.825	0.339	1.8e-25

UNIPROTKB|Q94G17 TATC "Sec-independent protein translocase protein TATC, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
 Identities = 225/334 (67%), Positives = 260/334 (77%)

Query:    27 RNRMNSVKVNSSSKLRFGVSRSRRRFEDALVCFAAFDGDDARDNQPELGSSGGVGSAVED 86
             R  +N ++VN+S+   + +S  + +  D LVCFA  D    +  Q    SS  +GSAVE+
Sbjct:    20 RTHLNPIRVNNSTGFSYPLSLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEE 79

Query:    87 RP---DVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFV 143
             RP   D+ D   +E LEN  +DG  S +Y+FLYP KELLPDDKEMSIFDHLEELR+RIF+
Sbjct:    80 RPENKDMIDGISEEALENFKEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFI 139

Query:   144 SVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP 203
             SVL VG +ILGCFA+SK+L+  LEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP
Sbjct:   140 SVLGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP 199

Query:   204 VILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVV 263
             +ILYEIIAF++PGLT+ ER+FLGPIVLGSSVLFYAGI FSY VL PAALNFFVNYAEG V
Sbjct:   200 IILYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAV 259

Query:   264 ESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXXTSDQMLSIWRYXXXXXXXXXX 323
             ESLWSIDQYFEFVLVLMFSTGLSFQVP+I          + D+MLS+WRY          
Sbjct:   260 ESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAA 319

Query:   324 XLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
              +TPSTDP+TQ+LLAAPLLGLY GGAWMVKL GR
Sbjct:   320 VVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 353

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0033281 "TAT protein transport complex" evidence=IDA

GO:0043953 "protein transport by the Tat complex" evidence=IDA

GO:0045038 "protein import into chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2045750 APG2 "ALBINO AND PALE GREEN 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
 Identities = 242/359 (67%), Positives = 267/359 (74%)

Query:     3 STSTALMAHLRLS---YGCFSKRHEPIRNRM-NSVKVNSSSKLRFGVSRSRRRFEDALVC 58
             STS+AL+ H RL+    G  +K+  P      NS +    + LR+ V++  RR +     
Sbjct:     5 STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWR---EAGLRYSVTQ--RRSKGFGPV 59

Query:    59 FAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPD 118
              A  D D   +  P      GVGSAVEDRP   D   D +          S +Y FLYP 
Sbjct:    60 SALNDDDSPTETTP------GVGSAVEDRPP--DSSEDRS----------SSVYEFLYPR 101

Query:   119 KELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFL 178
             KE LPDDKEM+IFDHLEELR+RIFVSVLAVGAAILGCFA+SK+LI+FLEAPVK++GVRFL
Sbjct:   102 KEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFL 161

Query:   179 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYA 238
             QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYA
Sbjct:   162 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYA 221

Query:   239 GIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXX 298
             G+AFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVI      
Sbjct:   222 GLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 281

Query:   299 XXXXTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
                 + DQMLSIWRY           +TPSTDPVTQMLLA PLLGLY GGAWMVKLTGR
Sbjct:   282 VGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

GO:0005886 "plasma membrane" evidence=ISM

GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0033281 "TAT protein transport complex" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0031361 "integral to thylakoid membrane" evidence=IDA

GO:0043235 "receptor complex" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TIGR_CMR|CHY_0863 CHY_0863 "sec-independent protein translocase protein TatC" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 69/222 (31%), Positives = 122/222 (54%)

Query:   124 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 183
             +DK M++F+HLE LR+ I +SV+A+    +  + Y    +  L  PV +  ++ + +   
Sbjct:     2 EDKPMTLFEHLEALRKVIIISVIAIVIGSIIAYNYVDYFLNILLQPVTALKMKLVFINVT 61

Query:   184 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 243
             E F T LK++   G++L SP+IL++I +FV PGL  AER+F+  ++    +LF AGI F+
Sbjct:    62 EAFMTKLKIAIILGIILASPIILWQIWSFVAPGLKPAERKFILRMIPVIIILFVAGIVFA 121

Query:   244 YWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXXT 303
             ++ +   A  F + +   ++  + +I +Y  F L  +   GL F++PV+          +
Sbjct:   122 FFTVFQIATRFLLQFGGDIMSPMITIGKYISFALNFLIPFGLVFELPVVVYILAKLNIIS 181

Query:   304 SDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLY 345
              + ++   +Y           LTP  D ++Q+L+AAPLL LY
Sbjct:   182 HEFLVKNRKYALLVVFILAAALTPGPDVISQLLMAAPLLILY 223

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q9KVQ3 VC_0088 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 76/236 (32%), Positives = 115/236 (48%)

Query:   125 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLA 181
             ++   +  HL ELR R+  +V AV    +G   +S E+  F+  P+      G   +   
Sbjct:     5 EQTQPLISHLLELRNRLLKAVAAVVVIFIGLIYFSNEIYEFVSKPLVERLPAGATMIATD 64

Query:   182 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 241
                 FFT LK++    + L  P ILY++ AFV PGL + ERR + P+++ SS+LFY G+A
Sbjct:    65 VASPFFTPLKLTLIAAVFLAVPFILYQVWAFVAPGLYKHERRLIFPLLVSSSLLFYCGVA 124

Query:   242 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXX 301
             F+Y+V+ P    FF   + G VE    I  Y +FVL L  + G++F+VPV          
Sbjct:   125 FAYFVVFPLVFGFFTAISLGGVEFATDIASYLDFVLALFLAFGIAFEVPVAIILLCWTGA 184

Query:   302 XTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
              T   +     Y           LTP  D ++Q LLA P+  L+  G +  +   R
Sbjct:   185 TTPKSLSEKRPYIIVGAFVVGMLLTPP-DMISQTLLAIPMCLLFEVGLFFARFYTR 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_0165 CPS_0165 "Sec-independent periplasmic protein translocation protein TatC" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 73/228 (32%), Positives = 120/228 (52%)

Query:   123 PDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAY-SKELIMFLEAPVKS---EGVRFL 178
             P     S+FDHL ELR R+  S+L V   +  C  Y ++++  ++  P+ +   EG + +
Sbjct:     4 PPTPVASLFDHLLELRNRLLRSILGV-LIVFCCLVYFAQDIYQYVAQPLLATMPEGSQMI 62

Query:   179 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYA 238
                    FF   K++    L +  P +LY++ +FV PGL   E+R + P++ GS++LFY+
Sbjct:    63 ATDVASPFFAPFKLTLVLSLFIAMPFVLYQVWSFVAPGLYSNEKRMIAPLMFGSTLLFYS 122

Query:   239 GIAFSYWVLTPAALNFFVNYA-EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXX 297
             GIAF+Y+++ P    FF + A EGVV +   I  Y +F+L L F+ G +F++P+      
Sbjct:   123 GIAFAYFLVFPVVFAFFTSVAPEGVVIAT-DISSYLDFILKLFFAFGAAFEIPIAIILMC 181

Query:   298 XXXXXTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLY 345
                  T D +     Y           LTP  D ++Q +LA P+L L+
Sbjct:   182 WTGMTTPDSLREKRPYVVVGAFVIGMLLTPP-DIISQTMLAVPMLILF 228

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|VC_0088 VC_0088 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 76/236 (32%), Positives = 115/236 (48%)

Query:   125 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLA 181
             ++   +  HL ELR R+  +V AV    +G   +S E+  F+  P+      G   +   
Sbjct:     5 EQTQPLISHLLELRNRLLKAVAAVVVIFIGLIYFSNEIYEFVSKPLVERLPAGATMIATD 64

Query:   182 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 241
                 FFT LK++    + L  P ILY++ AFV PGL + ERR + P+++ SS+LFY G+A
Sbjct:    65 VASPFFTPLKLTLIAAVFLAVPFILYQVWAFVAPGLYKHERRLIFPLLVSSSLLFYCGVA 124

Query:   242 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXX 301
             F+Y+V+ P    FF   + G VE    I  Y +FVL L  + G++F+VPV          
Sbjct:   125 FAYFVVFPLVFGFFTAISLGGVEFATDIASYLDFVLALFLAFGIAFEVPVAIILLCWTGA 184

Query:   302 XTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
              T   +     Y           LTP  D ++Q LLA P+  L+  G +  +   R
Sbjct:   185 TTPKSLSEKRPYIIVGAFVVGMLLTPP-DMISQTLLAIPMCLLFEVGLFFARFYTR 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_3043 CPS_3043 "Sec-independent periplasmic protein translocation protein TatC" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 71/222 (31%), Positives = 113/222 (50%)

Query:   130 IFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAP---VKSEGVRFLQLAPGEFF 186
             +FDHL ELR R+  +VL+V         ++ ++  ++  P   V  E  + +       F
Sbjct:    10 LFDHLIELRSRLLKAVLSVLVFFCSMIYFANDIYAYVSLPLLAVMPESGQMIATGVASSF 69

Query:   187 FTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWV 246
             F   K++    + +  P IL++I +F+ PGL R E++ +GP++LGSS LFY GI+F+Y+V
Sbjct:    70 FAPFKLTIVLAIFISMPYILFQIWSFIAPGLYRNEKKLMGPLMLGSSFLFYGGISFAYYV 129

Query:   247 LTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXXTSDQ 306
             + P    FF + A   V     I  Y +FVL L F+ G+ F++P++          T   
Sbjct:   130 VFPIVFAFFTSVAPEGVNIATDISSYLDFVLKLFFAFGIVFEIPIVIILLCWTGFTTPKS 189

Query:   307 MLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLY-FG 347
             +     Y           LTP  D ++Q LLA P+L L+ FG
Sbjct:   190 LREKRPYVAVGSFVIAMLLTPP-DIISQTLLAIPMLLLFEFG 230

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|DET_1599 DET_1599 "Sec-independent protein translocase TatC" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 77/250 (30%), Positives = 124/250 (49%)

Query:   108 ESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE 167
             E+P  +   P +E     K M I  H  ELRQR   S++A+   +L  F ++  +I FL 
Sbjct:     6 ETPETDEEEPPEEAKAKGK-MPIGGHFNELRQRFTRSIIALIVGVLVAFFFATPIIGFLT 64

Query:   168 APVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGP 227
             AP   +  +  QL   E+      VS + G +L SP ILY++IAF+ P L R E++F+  
Sbjct:    65 APGGPD-FKPAQLGVMEYASVFFNVSLWAGFILASPYILYQLIAFITPALNRNEKKFIFT 123

Query:   228 IVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSF 287
              +   + +F  G+AF+Y+V  P ALN  +++ + VV ++  I  Y   V  ++ + GL F
Sbjct:   124 AIPAVTGMFLLGLAFAYYVALPPALNILLHWGDDVVLTVVGIRDYMNVVTRILIALGLIF 183

Query:   288 QVPVIXXXXXXXXXXTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFG 347
             + P +          +   + S  +            +TP+ DPV Q ++A PL+ LY  
Sbjct:   184 ETPFVIMVLARLGVVSPKWLASKRKIWIVVAFVIAALITPTFDPVNQTIMAGPLIVLYEI 243

Query:   348 GAWMVKLTGR 357
               W+ KL  R
Sbjct:   244 SIWLSKLVYR 253

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016020 "membrane" evidence=ISS

NCBI_NP|NP_354692.1 tatC "SEC-independent protein translocase protein" [Agrobacterium fabrum str. C58 (taxid:176299)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 79/249 (31%), Positives = 120/249 (48%)

Query:   124 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGV-------- 175
             +DK   + +HL ELR R+  S+ A   A + CFA +K L   L  P K   +        
Sbjct:     6 EDKPQPLIEHLMELRTRLIWSLGAFFIAFIACFAVAKHLFNLLVIPYKWAVIWAGLDVAK 65

Query:   176 -RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSV 234
                +  AP EFFFT +KV+ +  +++  PVI  ++  FV PGL + ER    P ++ S +
Sbjct:    66 SSLIYTAPQEFFFTQIKVAMFGAMVISFPVIASQLYKFVAPGLYKNERAAFLPFLIASPI 125

Query:   235 LFYAGIAFSYWVLTPAALNFFVNY----AEGVVE-SLW-SIDQYFEFVLVLMFSTGLSFQ 288
             LF  G A  Y+  TP  + FF+       +G V  SL   + +Y   ++ L+ S GL FQ
Sbjct:   126 LFLIGAALVYFFFTPMVMWFFLAMQQLPVDGEVAISLMPKVSEYLSLIMTLVLSFGLVFQ 185

Query:   289 VPVIXXXXXXXXXXTSDQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFGG 348
             +PV+          TSD +    ++           LTP  DP++Q+ LA P + LY   
Sbjct:   186 LPVVTTLLARVGILTSDWLREKRKFAIVMAFVVAAVLTPP-DPMSQIGLALPAIILYEIS 244

Query:   349 AWMVKLTGR 357
              +M +L  R
Sbjct:   245 IYMARLVER 253

GO:0005215 "transporter activity" evidence=ISS

UNIPROTKB|P69423 tatC [Escherichia coli K-12 (taxid:83333)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 75/221 (33%), Positives = 115/221 (52%)

Query:   130 IFDHLEELRQRIFVSVLAVGAAILGCFAY-SKELIMFLEAP-VKS--EGVRFLQLAPGEF 185
             +  HL ELR+R+   ++AV    L C  Y + ++   + AP +K   +G   +       
Sbjct:     9 LITHLIELRKRLLNCIIAVIVIFL-CLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASP 67

Query:   186 FFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYW 245
             FFT +K++    L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+
Sbjct:    68 FFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYF 127

Query:   246 VLTPAALNFFVNYA-EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXXTS 304
             V+ P A  F  N A EGV  S   I  Y  FV+ L  + G+SF+VPV           + 
Sbjct:   128 VVFPLAFGFLANTAPEGVQVST-DIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSP 186

Query:   305 DQMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLY 345
             + +     Y           LTP  D  +Q LLA P+  L+
Sbjct:   187 EDLRKKRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLF 226

GO:0016020 "membrane" evidence=IDA

GO:0008565 "protein transporter activity" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IDA;IMP

GO:0009977 "proton motive force dependent protein transmembrane transporter activity" evidence=IMP

GO:0033281 "TAT protein transport complex" evidence=IDA

GO:0065002 "intracellular protein transmembrane transport" evidence=IDA;IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SJV5	TATC_ARATH	No assigned EC number	0.7214	0.9299	0.9764	yes	no
Q9AVE6	TATC_ORYSJ	No assigned EC number	0.7714	0.8515	0.8467	yes	no
Q94G17	TATC_PEA	No assigned EC number	0.7305	0.9271	0.9376	N/A	no
O78493	YCF43_GUITH	No assigned EC number	0.5043	0.6330	0.7793	yes	no
C4IZX0	TATC_MAIZE	No assigned EC number	0.7571	0.8571	0.8595	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	357
CHL00182	249	CHL00182, tatC, Sec-independent translocase compon	1e-101
TIGR00945	215	TIGR00945, tatC, Twin arginine targeting (Tat) pro	9e-98
COG0805	255	COG0805, TatC, Sec-independent protein secretion p	3e-77
pfam00902	212	pfam00902, TatC, Sec-independent protein transloca	1e-71
PRK10921	258	PRK10921, PRK10921, twin-arginine protein transloc	1e-36
TIGR01912	237	TIGR01912, TatC-Arch, Twin arginine targeting (Tat	7e-34

>gnl|CDD|177084 CHL00182, tatC, Sec-independent translocase component C; Provisional

 Score =  297 bits (763), Expect = e-101
 Identities = 128/245 (52%), Positives = 183/245 (74%), Gaps = 4/245 (1%)

Query: 112 YNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVK 171
           +NF + D E    D EM + +HLEELRQR+F+S+  +    + CF   K ++  L+AP K
Sbjct: 8   WNFNFLDIED--PDLEMPLSEHLEELRQRLFLSLSILLLLTIVCFINVKSIVEILQAPAK 65

Query: 172 SEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLG 231
             G++FLQL+PGE+FF+++K+S Y GLL+ SP I+Y+II F+LPGLT+ ER+ + P+++ 
Sbjct: 66  --GIKFLQLSPGEYFFSSIKISFYTGLLISSPFIIYQIILFILPGLTKKERKIILPLLIS 123

Query: 232 SSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPV 291
           S VLF  G+ F+Y+VL PAALNFF+NY   VVE LWS DQYF+F+LVL FSTGL+FQ+P+
Sbjct: 124 SLVLFGLGLIFAYFVLVPAALNFFINYGSDVVEPLWSFDQYFDFILVLFFSTGLAFQIPI 183

Query: 292 IQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWM 351
           IQ++LG + +++S QMLS WRYV++ + I  A+LTPSTDP+TQ+LL+  +L LYF G  +
Sbjct: 184 IQIVLGLLNIISSKQMLSAWRYVILVSTIVGAILTPSTDPLTQLLLSLAILLLYFSGVIV 243

Query: 352 VKLTG 356
           +KL  
Sbjct: 244 LKLLK 248

Length = 249

>gnl|CDD|233202 TIGR00945, tatC, Twin arginine targeting (Tat) protein translocase TatC

 Score =  288 bits (739), Expect = 9e-98
 Identities = 122/216 (56%), Positives = 164/216 (75%), Gaps = 1/216 (0%)

Query: 130 IFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTT 189
           +F+HLEELR+R+ +S++A   A   CF +SK +I  L+APV + GV F+  +P E FFT 
Sbjct: 1   LFEHLEELRKRLLISLIAFLVAFFICFYFSKPIIELLQAPVLALGVTFIATSPTEPFFTY 60

Query: 190 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 249
           +K+S   G++L SPVILY+I AF+LPGL   ERR L P++LGS +LF AG+AF+Y+VL P
Sbjct: 61  IKLSLIVGIILSSPVILYQIWAFILPGLYEHERRLLLPLLLGSILLFLAGLAFAYYVLFP 120

Query: 250 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 309
           AALNF + Y   VVE L SIDQYFEFVL L+FS G++FQVPV+Q+LLG++G+VT +Q+ S
Sbjct: 121 AALNFLLTYGADVVEILLSIDQYFEFVLKLLFSFGVAFQVPVLQVLLGRLGIVTYEQLRS 180

Query: 310 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 345
             RYV+VGA +  A+LTP  DP++Q+LLA PLL LY
Sbjct: 181 KRRYVIVGAFVIGAILTP-PDPLSQILLAIPLLLLY 215

This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR01912) represents the archaeal clade of this family. TatC is often found in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409) [Protein fate, Protein and peptide secretion and trafficking]. Length = 215

>gnl|CDD|223876 COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]

 Score =  237 bits (607), Expect = 3e-77
 Identities = 86/240 (35%), Positives = 143/240 (59%), Gaps = 7/240 (2%)

Query: 124 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE-----GVRFL 178
            ++   + +HL ELR+R+   ++A   A L  F ++K+L   L AP+         V  +
Sbjct: 4   VEELQPLIEHLIELRKRLLRILIAFIVAFLILFYFAKDLYELLVAPLTYAQLPEGAVELI 63

Query: 179 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYA 238
             +P E FFT +K++ + GLLL  PVILY++ AF+ PGL + ERR + P+++ S VLF  
Sbjct: 64  ATSPTEPFFTYIKLALFAGLLLALPVILYQLWAFIAPGLYKHERRLILPLLIPSFVLFLL 123

Query: 239 GIAFSYWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 297
           G AF+Y+V+ P    F +++A    V    SI +Y  FVL L+ + G++F++PV+ +LL 
Sbjct: 124 GAAFAYFVVFPLVFKFLLSFAAPDGVSPALSISKYLSFVLTLLLAFGVAFELPVVIVLLT 183

Query: 298 QVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           ++G+VT + +    RY +V A + AA++TP  D ++Q+LLA PL+ LY     + +   +
Sbjct: 184 RLGIVTPETLKKKRRYAIVAAFVIAAIITP-PDVLSQILLAIPLILLYELSILISRFVEK 242

Length = 255

>gnl|CDD|216181 pfam00902, TatC, Sec-independent protein translocase protein (TatC)

 Score =  221 bits (567), Expect = 1e-71
 Identities = 90/213 (42%), Positives = 137/213 (64%), Gaps = 4/213 (1%)

Query: 131 FDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGEFFF 187
            +HLEELR+R+  S++A     + C+ +S+E+I+FL AP+ +      + +  +P E FF
Sbjct: 1   LEHLEELRKRLIYSLIAFILGFIICYFFSEEIILFLLAPLLNALPPNSKLIYTSPTEAFF 60

Query: 188 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 247
           T LK+S + GL+L  P+ILY+I AF+ PGL + ERRFL P V  S +LF  G AF+Y+V+
Sbjct: 61  TYLKLSLFAGLILALPIILYQIWAFIAPGLYKNERRFLLPFVFASFLLFLLGAAFAYFVV 120

Query: 248 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 307
            P AL F + +    +E   SI +Y  FVL L+ + GL F++PVI +LL ++G+VT + +
Sbjct: 121 LPIALKFLLGFGPEGIEPQPSISEYLSFVLRLLLAFGLLFELPVILVLLAKLGIVTPEFL 180

Query: 308 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAP 340
               RY +V   I AA++TP  D ++Q+LLA P
Sbjct: 181 RKNRRYAIVLIFIIAAIITPP-DVISQLLLAIP 212

The bacterial Tat system has a remarkable ability to transport folded proteins even enzyme complexes across the cytoplasmic membrane. It is structurally and mechanistically similar to the Delta pH-driven thylakoidal protein import pathway. A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N- and C-termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N-terminus and the first cytoplasmic loop region of the Escherichia coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon. Length = 212

>gnl|CDD|182840 PRK10921, PRK10921, twin-arginine protein translocation system subunit TatC; Provisional

 Score =  132 bits (334), Expect = 1e-36
 Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 4/216 (1%)

Query: 133 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 189
           HL ELR+R+   ++AV    L    ++ ++   + AP+  +   G   +       FFT 
Sbjct: 12  HLIELRKRLLNCIIAVLVIFLALVYFANDIYHLVSAPLIKQLPQGATMIATDVASPFFTP 71

Query: 190 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 249
           +K++    L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72  IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131

Query: 250 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 309
            A  F    A   V+    I  Y  FV+ L  + G+SF+VPV  +LL  +G+ T + +  
Sbjct: 132 LAFGFLAKTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGVTTPEDLRK 191

Query: 310 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 345
              YV+VGA +   +LTP  D  +Q LLA P+  L+
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLF 226

Length = 258

>gnl|CDD|162597 TIGR01912, TatC-Arch, Twin arginine targeting (Tat) protein translocase TatC, Archaeal clade

 Score =  124 bits (314), Expect = 7e-34
 Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 8/229 (3%)

Query: 133 HLEELRQRIFVS--VLAVGAAILGCFAYSKELIMFLEAPVKSEG-----VRFLQLAPGEF 185
            L   R  + +    +  G+ +     ++  +I  L   +            +  +P   
Sbjct: 5   ALATFRLILLLVALAIVTGSVLGWLTIFTPFIIAALRESILPLLAYHVIATLIAPSPFAA 64

Query: 186 FFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYW 245
               +K + + GLLL SPV+ YE   F+ P L   ERR +  + + +  LF  G  F+YW
Sbjct: 65  LELRIKSAFFIGLLLASPVLAYEAYRFIKPALKPHERRQVRLLGVIAVGLFAFGALFAYW 124

Query: 246 VLTPAALNFFVNYAEGVVESL-WSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 304
           V+ P        +A  +  S    I +Y  F L L+ S GL+F+ PV+ + L ++G+V++
Sbjct: 125 VIFPLIFQILFEFASPLGLSAIMDIRKYTSFALKLILSFGLAFETPVVLVFLTRLGVVSA 184

Query: 305 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 353
             ++  WR +++  ++  AV+TP  D V+ +LLA PL+ LY     + K
Sbjct: 185 STLVDYWRVIILVVLVFGAVITPDPDVVSMILLAIPLIALYGLALVISK 233

This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR00945) represents the bacterial clade of this family. TatC is often found (in bacteria) in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409). Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	357
CHL00182	249	tatC Sec-independent translocase component C; Prov	100.0
PRK10921	258	twin-arginine protein translocation system subunit	100.0
COG0805	255	TatC Sec-independent protein secretion pathway com	100.0
TIGR01912	237	TatC-Arch Twin arginine targeting (Tat) protein tr	100.0
TIGR00945	215	tatC Twin arginine targeting (Tat) protein translo	100.0
PF00902	215	TatC: Sec-independent protein translocase protein	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	93.69

>CHL00182 tatC Sec-independent translocase component C; Provisional

Probab=100.00  E-value=1.9e-61  Score=458.14  Aligned_cols=236  Identities=53%  Similarity=0.976  Sum_probs=226.5

Q ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccccccCceeeecCCChHHHHHHHHHHHHHHH
Q 018342          120 ELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLL  199 (357)
Q Consensus       120 ~~~~~d~em~L~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~~~~~~fi~tsp~E~F~~~lkiSl~~gli  199 (357)
                      +..++|+|||+.||++|||+|+++++++++++++++|++++++++++.+|..  +.++++|+++|+|++++|+|+++|++
T Consensus        14 ~~~~~~~~~~l~~HL~ELR~Rli~~li~~~i~~~v~~~~~~~l~~~l~~p~~--~~~li~t~~~E~f~~~ikls~~~g~~   91 (249)
T CHL00182         14 DIEDPDLEMPLSEHLEELRQRLFLSLSILLLLTIVCFINVKSIVEILQAPAK--GIKFLQLSPGEYFFSSIKISFYTGLL   91 (249)
T ss_pred             ccCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCceEEcCchHHHHHHHHHHHHHHHH
Confidence            3445567899999999999999999999999999999999999999999974  45699999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhccHHHHHHHHHHH
Q 018342          200 LGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVL  279 (357)
Q Consensus       200 ls~P~ilYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~~~i~~~~~I~~Yl~Fvl~l  279 (357)
                      +++|+++||+|+|++||||++|||+.++++..+.++|++|++|+|++++|.+++|+++++++++++.+++++|++|++++
T Consensus        92 ~a~P~i~yqiw~Fi~PgLy~~Er~~~~~~~~~s~~lF~~G~~f~y~vvlP~~~~Fl~~f~~~~~~~~~~i~~Yl~f~~~~  171 (249)
T CHL00182         92 ISSPFIIYQIILFILPGLTKKERKIILPLLISSLVLFGLGLIFAYFVLVPAALNFFINYGSDVVEPLWSFDQYFDFILVL  171 (249)
T ss_pred             HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhhccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018342          280 MFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR  357 (357)
Q Consensus       280 ll~fGl~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLYEisi~I~k~~~r  357 (357)
                      ++++|++||+|+++++|.+.|++++++++|+|||++++++++||++|||||++||+++|+||++|||+++++++++++
T Consensus       172 ~l~fGl~FelPvi~~~L~~~givs~~~L~~~Rr~~~v~~~i~aAiiTP~pD~~sqi~laiPl~lLYEisI~i~~~~~~  249 (249)
T CHL00182        172 FFSTGLAFQIPIIQIVLGLLNIISSKQMLSAWRYVILVSTIVGAILTPSTDPLTQLLLSLAILLLYFSGVIVLKLLKK  249 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcCHHHHHhhCchHhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999999889999999999999999999999998764

>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional

Probab=100.00  E-value=8.6e-61  Score=455.67  Aligned_cols=232  Identities=33%  Similarity=0.609  Sum_probs=224.2

Q ss_pred             CcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccccc---cCceeeecCCChHHHHHHHHHHHHHHHHh
Q 018342          125 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGEFFFTTLKVSGYCGLLLG  201 (357)
Q Consensus       125 d~em~L~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~~---~~~~fi~tsp~E~F~~~lkiSl~~glils  201 (357)
                      |++||++||++|||+|+++++++++++++++|++++++++++.+|+..   ++.++++|+++|+|++++|+|+++|++++
T Consensus         4 ~~~~~l~~HL~ELR~Rli~~li~~~i~~~~~~~~~~~l~~~l~~pl~~~~~~~~~li~t~~~e~f~~~lk~sl~~g~~la   83 (258)
T PRK10921          4 EDTQPLISHLIELRKRLLNCIIAVLVIFLALVYFANDIYHLVSAPLIKQLPQGATMIATDVASPFFTPIKLTFMVSLILS   83 (258)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeecCchHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999999999999843   35689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhccHHHHHHHHHHHHH
Q 018342          202 SPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMF  281 (357)
Q Consensus       202 ~P~ilYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~~~i~~~~~I~~Yl~Fvl~lll  281 (357)
                      +|+++||+|+|++||||++|||+.++++..+.++|++|+.|+|++++|.+++|+++++++++++.+++++|++|++++++
T Consensus        84 ~P~ilyqiw~Fi~PgLy~~Err~~~~~~~~s~~LF~~G~~f~y~~vlP~~~~Fl~~f~~~~~~~~~~i~~Y~~fv~~~~l  163 (258)
T PRK10921         84 APVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLAKTAPEGVQVSTDIASYLSFVMALFM  163 (258)
T ss_pred             HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhhhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988788999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018342          282 STGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR  357 (357)
Q Consensus       282 ~fGl~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLYEisi~I~k~~~r  357 (357)
                      ++|++||+|+++++|++.|++++++++|+|||++++++++||++|| ||++||+++|+||++|||++++++++.+|
T Consensus       164 ~fGl~FelPli~~~L~~~giv~~~~l~~~Rr~~~v~~~iiaAiiTP-pD~isq~llaiPl~lLYEisI~i~~~~~~  238 (258)
T PRK10921        164 AFGVSFEVPVAIVLLCWMGVTTPEDLRKKRPYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLFEIGVFFSRFYVG  238 (258)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCHHHHHhcCcHHhHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999999 79999999999999999999999998654

>COG0805 TatC Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]

Probab=100.00  E-value=1.1e-58  Score=439.61  Aligned_cols=234  Identities=38%  Similarity=0.680  Sum_probs=225.1

Q ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhcccc-c---cC-ceeeecCCChHHHHHHHHHHHHH
Q 018342          123 PDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVK-S---EG-VRFLQLAPGEFFFTTLKVSGYCG  197 (357)
Q Consensus       123 ~~d~em~L~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~-~---~~-~~fi~tsp~E~F~~~lkiSl~~g  197 (357)
                      .+|+++|+.||+.|||+|+.++++++++++.+++++.+++...+.+|+. .   ++ .++++++|+|+|++++|+|+++|
T Consensus         3 ~~~~~~pl~~hL~eLr~rL~~~~~~~~v~f~~~~~~~~~l~~~l~~p~~~~~l~~~~~~li~~~p~e~~~~~ik~a~~~g   82 (255)
T COG0805           3 MVEELQPLIEHLIELRKRLLRILIAFIVAFLILFYFAKDLYELLVAPLTYAQLPEGAVELIATSPTEPFFTYIKLALFAG   82 (255)
T ss_pred             cccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcccccceeEEcCcHHHHHHHHHHHHHHH
Confidence            4567888999999999999999999999999999999999999999975 2   22 47999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhhccHHHHHHHH
Q 018342          198 LLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYA-EGVVESLWSIDQYFEFV  276 (357)
Q Consensus       198 lils~P~ilYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~-~~~i~~~~~I~~Yl~Fv  276 (357)
                      +++++|+++||+|+|++||||+||||+.++++..+.+||++|++|+|++++|.+++|+.+++ ++++++.+++++|++|+
T Consensus        83 l~~a~P~i~yq~w~FiaPGLy~~Err~~~~~~~~s~~LF~~G~~faYfvv~P~~~~F~~~~~~~~~~~~~~~i~~y~~f~  162 (255)
T COG0805          83 LLLALPVILYQLWAFIAPGLYKHERRLILPLLIPSFVLFLLGAAFAYFVVFPLVFKFLLSFAAPDGVSPALSISKYLSFV  162 (255)
T ss_pred             HHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceeeeecHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999998 56899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018342          277 LVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTG  356 (357)
Q Consensus       277 l~lll~fGl~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLYEisi~I~k~~~  356 (357)
                      +.++++||++||+|+++++|++.|++++++++++|||++++++++||++|| ||++||+++|+||++|||+|++++|+++
T Consensus       163 l~l~~~FGv~FElPvv~~~L~~~Giv~~~~L~~~rr~~iv~~fViaaviTP-pd~~sq~llaiPl~lLyElsi~~~r~~~  241 (255)
T COG0805         163 LTLLLAFGVAFELPVVIVLLTRLGIVTPETLKKKRRYAIVAAFVIAAIITP-PDVLSQILLAIPLILLYELSILISRFVE  241 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHcCCeeeehHHHHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999999999999 8999999999999999999999999987


Q ss_pred             C
Q 018342          357 R  357 (357)
Q Consensus       357 r  357 (357)
                      |
T Consensus       242 ~  242 (255)
T COG0805         242 K  242 (255)
T ss_pred             c
Confidence            5

>TIGR01912 TatC-Arch Twin arginine targeting (Tat) protein translocase TatC, Archaeal clade

Probab=100.00  E-value=5.6e-58  Score=431.56  Aligned_cols=228  Identities=27%  Similarity=0.478  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--cchHHHHHHHhcccccc-----CceeeecCCChHHHHHHHHHHHHHHHHhH
Q 018342          130 IFDHLEELRQRIFVSVLAVGAAILGCF--AYSKELIMFLEAPVKSE-----GVRFLQLAPGEFFFTTLKVSGYCGLLLGS  202 (357)
Q Consensus       130 L~eHL~ELR~RLi~~liaf~i~~iv~~--~f~~~li~lL~~Pl~~~-----~~~fi~tsp~E~F~~~lkiSl~~glils~  202 (357)
                      +.+|++|||+|+++++++++++++++|  ++++++++++.+|+.+.     +.++++++|+|+|++++|+|+++|+++++
T Consensus         2 ~~~Hl~ELR~Rli~~~i~~~~~~~~~~~~~~~~~i~~~l~~p~~~~~~~~~~~~li~~~~~e~f~~~lk~s~~~g~~~~~   81 (237)
T TIGR01912         2 LLIALATFRLILLLVALAIVTGSVLGWLTIFTPFIIAALRESILPLLAYHVIATLIAPSPFAALELRIKSAFFIGLLLAS   81 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCceeEEcCchHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999999999  99999999999987432     34799999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhhhccHHHHHHHHHHHHH
Q 018342          203 PVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAE-GVVESLWSIDQYFEFVLVLMF  281 (357)
Q Consensus       203 P~ilYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~-~~i~~~~~I~~Yl~Fvl~lll  281 (357)
                      |+++||+|+|++||||++|||+.++++..+.++|++|++|+|++++|.+++|+.+++. .++++.+++++|++|++++++
T Consensus        82 P~i~yqiw~Fi~PgLy~~Er~~~~~~~~~~~~lF~~G~~f~y~~vlP~~~~f~~~f~~~~~~~~~~~i~~Y~~f~~~~~~  161 (237)
T TIGR01912        82 PVLAYEAYRFIKPALKPHERRQVRLLGVIAVGLFAFGALFAYWVIFPLIFQILFEFASPLGLSAIMDIRKYTSFALKLIL  161 (237)
T ss_pred             HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccceeecHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999975 468899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018342          282 STGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR  357 (357)
Q Consensus       282 ~fGl~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLYEisi~I~k~~~r  357 (357)
                      ++|++||+|+++++|.+.|++++++++|+|||++++++++||++||+||++||+++|+||++|||++++++++.+|
T Consensus       162 ~fGl~FelPvv~~~L~~~giv~~~~l~~~rr~~~v~~~i~aAiiTP~pD~~sq~~laiPl~~LYeisi~i~~~~~k  237 (237)
T TIGR01912       162 SFGLAFETPVVLVFLTRLGVVSASTLVDYWRVIILVVLVFGAVITPDPDVVSMILLAIPLIALYGLALVISKRVEK  237 (237)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            9999999999999999999999999999999999999999999999899999999999999999999999999876

This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR00945) represents the bacterial clade of this family. TatC is often found (in bacteria) in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409).

>TIGR00945 tatC Twin arginine targeting (Tat) protein translocase TatC

Probab=100.00  E-value=3.5e-56  Score=413.36  Aligned_cols=215  Identities=57%  Similarity=0.957  Sum_probs=210.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccccccCceeeecCCChHHHHHHHHHHHHHHHHhHHHHHHHH
Q 018342          130 IFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEI  209 (357)
Q Consensus       130 L~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~~~~~~fi~tsp~E~F~~~lkiSl~~glils~P~ilYQl  209 (357)
                      ++||++|||+|+++++++++++++++|++++++++++.+|....+.++++|+|+|+|++++|+|+++|+++++|+++||+
T Consensus         1 l~~Hl~ELR~Rl~~~~i~~~~~~~i~~~~~~~l~~~l~~p~~~~~~~li~t~~~e~f~~~lk~s~~~g~~~~~P~i~yqi   80 (215)
T TIGR00945         1 LFEHLEELRKRLLISLIAFLVAFFICFYFSKPIIELLQAPVLALGVTFIATSPTEPFFTYIKLSLIVGIILSSPVILYQI   80 (215)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEecCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999998766788999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhccHHHHHHHHHHHHHHHHHHHHH
Q 018342          210 IAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQV  289 (357)
Q Consensus       210 w~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~~~i~~~~~I~~Yl~Fvl~lll~fGl~Fql  289 (357)
                      |+|++||||++|||+.++++..+.++|++|++|+|++++|.+++|+.+++++++++.+++++|++|++++++++|++||+
T Consensus        81 w~Fi~PgLy~~Er~~~~~~~~~~~~lF~~G~~f~y~~vlP~~~~F~~~~~~~~~~~~~~i~~y~~f~~~~~l~fGl~Fql  160 (215)
T TIGR00945        81 WAFILPGLYEHERRLLLPLLLGSILLFLAGLAFAYYVLFPAALNFLLTYGADVVEILLSIDQYFEFVLKLLFSFGVAFQV  160 (215)
T ss_pred             HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 018342          290 PVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY  345 (357)
Q Consensus       290 PlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLY  345 (357)
                      |+++.+|++.|++|+++++|+|||++++++++||++|| ||++||+++++||++||
T Consensus       161 Pli~~~l~~~giv~~~~l~~~Rr~~~~~~~i~aa~iTP-pD~~sq~~la~Pl~~LY  215 (215)
T TIGR00945       161 PVLQVLLGRLGIVTYEQLRSKRRYVIVGAFVIGAILTP-PDPLSQILLAIPLLLLY  215 (215)
T ss_pred             HHHHHHHHHcCCCCHHHHHhhhHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHC
Confidence            99999999999999999999999999999999999999 89999999999999987

This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR01912) represents the archaeal clade of this family. TatC is often found in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409).

>PF00902 TatC: Sec-independent protein translocase protein (TatC); InterPro: IPR002033 Proteins encoded by the mttABC operon (formerly yigTUW), mediate a novel Sec-independent membrane targeting and translocation system in Escherichia coli that interacts with cofactor-containing redox proteins having a S/TRRXFLK "twin arginine" leader motif

Probab=100.00  E-value=1.5e-52  Score=387.92  Aligned_cols=209  Identities=41%  Similarity=0.728  Sum_probs=202.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccccccC-----ceeeecCCChHHHHHHHHHHHHHHHHhHHHH
Q 018342          131 FDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEG-----VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVI  205 (357)
Q Consensus       131 ~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~~~~-----~~fi~tsp~E~F~~~lkiSl~~glils~P~i  205 (357)
                      +||++|||+|+++++++++++++++|+++++++.++.+|+.+..     .++++|+|+|+|.+++|+|+++|+++++|++
T Consensus         1 ~~Hl~ELr~Rl~~~li~~~i~~~v~~~~~~~l~~~l~~p~~~~~~~~~~~~li~~~~~e~f~~~lk~s~~~~~~~~~P~~   80 (215)
T PF00902_consen    1 WEHLEELRYRLIYSLISFIIAFIVCFWFSEELIYFLIKPLPQILPSQNSVKLIFTSPTEAFFTYLKLSFFLGLIISLPYI   80 (215)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccccccceEEECChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999987532     5899999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hhhhccHHHHHHHHHHHHHHHH
Q 018342          206 LYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTG  284 (357)
Q Consensus       206 lYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~~~-i~~~~~I~~Yl~Fvl~lll~fG  284 (357)
                      +||+|+|++||||++|||+.++++..++++|++|+.|+|++++|.+++|+++++.++ +++++++++|++|++++++++|
T Consensus        81 ~yq~w~Fi~PgL~~~Er~~~~~~~~~~~~lf~~g~~f~y~~ilP~~~~fl~~f~~~~~~~~~~~i~~y~~f~~~~~~~~g  160 (215)
T PF00902_consen   81 LYQIWAFIAPGLYKHERRFFKKFVLISFILFLLGVAFAYFVILPLILKFLLSFSPTSGIQPEPSISSYLNFVIQFLLIFG  160 (215)
T ss_pred             HHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhccHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998765 4999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 018342          285 LSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAP  340 (357)
Q Consensus       285 l~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiP  340 (357)
                      ++||+|+++++|.+.|++++++++|+|||++++++++||++|| ||++||+++++|
T Consensus       161 l~FqlPli~~~L~~~giv~~~~l~~~rr~~~~~~~iiaa~itP-pD~~sql~l~iP  215 (215)
T PF00902_consen  161 LIFQLPLIMFFLVRLGIVSPKFLRKYRRYAYFGIFIIAAFITP-PDPISQLLLAIP  215 (215)
T ss_pred             HHHHHHHHHHHHHHcCCcCHHHHHHhhhHHHHHHHHHHHHhcC-chHHHHHHHhCC
Confidence            9999999999999999999999999999999999999999999 899999999987

This family contains the E. coli mttB gene (TATC) []. A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N and C termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N terminus and the first cytoplasmic loop region of the E. coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon [, ].

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=93.69  E-value=5.6  Score=44.03  Aligned_cols=17  Identities=24%  Similarity=0.436  Sum_probs=8.7

Q ss_pred             HHHHHHHHHHHHHhHHH
Q 018342          188 TTLKVSGYCGLLLGSPV  204 (357)
Q Consensus       188 ~~lkiSl~~glils~P~  204 (357)
                      ..+..+.++|.++..++
T Consensus       205 g~l~s~~~lG~iiG~li  221 (742)
T TIGR01299       205 GMLGLIVYLGMMVGAFF  221 (742)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            33444555555555554

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	357
4b4a_A	249	Structure Of The Tatc Core Of The Twin Arginine Pro		1e-24

>pdb|4B4A|A Chain A, Structure Of The Tatc Core Of The Twin Arginine Protein Translocation System Length = 249

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 132 DHLEELRQRIFVSVLA--VGAAILGCFAYSKELIMFLEAPVKSE--GVRFLQLAPGEFFF 187
           +HL ELR R+ +S++A  +G+ I   F ++K +   L+ P+      V  + L+P E  F
Sbjct: 5   EHLRELRYRLIISIIAFLIGSGI--AFYFAKYVFEILKEPILKSYPEVELITLSPTEPLF 62
Query: 188 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 247
             +K+S   G ++ SPVILY+   F+ P L   E+R   P++LGS +LF  G  F+Y+++
Sbjct: 63  ILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFXLGALFAYFIV 122
Query: 248 TPAALNFF--VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIXXXXXXXXXXTSD 305
            P AL F   + + + +     S+D Y  FVL L+ + G++F+ P++          T +
Sbjct: 123 LPLALKFLLGLGFTQLLATPYLSVDXYISFVLKLVVAFGIAFEXPIVLYVLQKAGVITPE 182
Query: 306 QMLSIWRYXXXXXXXXXXXLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 357
           Q+ S  +Y           + P  D  TQ+L A PLL LY    ++ KL  R
Sbjct: 183 QLASFRKYFIVIAFVIGAIIAP--DVSTQVLXAIPLLLLYEISIFLGKLATR 232

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	357
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 9e-05
 Identities = 49/349 (14%), Positives = 94/349 (26%), Gaps = 110/349 (31%)

Query: 19  FSKRHEPIRNRMNSVKVNSSSKLR----------FGVSRSRRRFEDALVCFAAFDGDDAR 68
           F+K +         ++  +  +LR           G  ++           A    D   
Sbjct: 126 FAKYNVSRLQPYLKLR-QALLELRPAKNVLIDGVLGSGKT---------WVAL---DVCL 172

Query: 69  DNQPELGSSGGV-----GSAVEDRPDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLP 123
             + +      +      +   + P+         LE L +      L   + P+     
Sbjct: 173 SYKVQCKMDFKIFWLNLKN--CNSPE-------TVLEMLQK------LLYQIDPNWTSRS 217

Query: 124 DDKEMSIFDHLEELRQRI--------FVSVLAV-----GAAILGCFAYS---------KE 161
           D    +I   +  ++  +        + + L V      A     F  S         K+
Sbjct: 218 DHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 162 LIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLG-------------SPVILYE 208
           +  FL A   +  +     +      T  +V       L              +P  L  
Sbjct: 277 VTDFLSAATTTH-ISLDHHSMT---LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 209 IIAFVLPGLTRAER-RFLGPIVLGSSVLFYAGIAFSYWVLTPA-------ALNFF---VN 257
           I   +  GL   +  + +    L +       I  S  VL PA        L+ F    +
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTI------IESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 258 YAEGVVESLW--SIDQYFEFVLVLMFSTGL--------SFQVPVIQLLL 296
               ++  +W   I      V+  +    L        +  +P I L L
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 6e-04
 Identities = 48/329 (14%), Positives = 92/329 (27%), Gaps = 91/329 (27%)

Query: 45  VSRSRRRFEDALVC------FAAFDGDDARDNQPELGSSGGVGSAVEDRPDVTDIPRDET 98
           VS + R F    +          F  +  R N   L S       ++       +     
Sbjct: 61  VSGTLRLFW--TLLSKQEEMVQKFVEEVLRINYKFLMS------PIKTEQRQPSMMTRMY 112

Query: 99  LENLNQDGVESPLYNFLYPDKELLPD------DKEMSIFDHLEELRQRIFVSVLAVGAAI 152
           +E  +       LYN    D ++            + +   L ELR    V +   G  +
Sbjct: 113 IEQRD------RLYN----DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI--DG--V 158

Query: 153 LGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYC---GLLLGSPVILYEI 209
           LG     K   + L+    S  V        + F+  L     C     +L     L   
Sbjct: 159 LGS---GKT-WVALDV-CLSYKV--QCKMDFKIFWLNL---KNCNSPETVLEMLQKLLYQ 208

Query: 210 IAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVN--YAEGV----- 262
           I       +R++      + + S              +         +  Y   +     
Sbjct: 209 I--DPNWTSRSDHSSNIKLRIHS--------------IQAELRRLLKSKPYENCLLVLLN 252

Query: 263 VESLWSIDQYFEF---VLVLMFSTGLSFQVPV-----IQLLLGQVGLVTSDQMLSIWRYV 314
           V++  + +  F     +L+      ++  +       I L    + L T D++ S+    
Sbjct: 253 VQNAKAWN-AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSL---- 306

Query: 315 VVGAVIAAAVLTPSTD-PVTQMLLAAPLL 342
                +   +     D P  ++L   P  
Sbjct: 307 -----LLKYLDCRPQDLPR-EVLTTNPRR 329

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	357
4b4a_A	249	TATC, SEC-independent protein translocase protein	100.0
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	84.38

>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}

Probab=100.00  E-value=6.1e-61  Score=453.26  Aligned_cols=227  Identities=34%  Similarity=0.605  Sum_probs=214.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccccc---cCceeeecCCChHHHHHHHHHHHHHHHHhHHH
Q 018342          128 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPV  204 (357)
Q Consensus       128 m~L~eHL~ELR~RLi~~liaf~i~~iv~~~f~~~li~lL~~Pl~~---~~~~fi~tsp~E~F~~~lkiSl~~glils~P~  204 (357)
                      ||+.|||+|||+|+++++++++++++++|++++++++++.+|+..   ++ ++++|+|+|+|++++|+|+++|+++++|+
T Consensus         1 m~l~~HL~ELR~Rli~~~i~~~v~~~~~~~~~~~i~~~l~~P~~~~~~~~-~li~t~~~e~f~~~lkvs~~~g~~~a~P~   79 (249)
T 4b4a_A            1 MPLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEV-ELITLSPTEPLFILIKISLAVGFIIASPV   79 (249)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTS-CEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-CeeecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999863   23 89999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhc--cHHHHHHHHHHHHHH
Q 018342          205 ILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLW--SIDQYFEFVLVLMFS  282 (357)
Q Consensus       205 ilYQlw~FI~PgLy~~Erk~~~~~l~~s~~LF~lGv~F~YfvIlP~~l~Fll~f~~~~i~~~~--~I~~Yl~Fvl~lll~  282 (357)
                      ++||+|+|++||||+||||+..+++..+.++|++|++|+|++++|.+++|+.+++++++++++  ++++|++|+++++++
T Consensus        80 ilyQiw~Fi~PgLy~~Err~~~~~~~~s~~LF~~G~~f~Yf~v~P~~~~Fl~~~~~~~i~~~~~~~i~~Yl~fv~~l~l~  159 (249)
T 4b4a_A           80 ILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVA  159 (249)
T ss_dssp             HHHHHHHHHTTTTSCCCTTTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTTCSSSTTSSSSTTEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHhhHHhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999988888877  999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCHHHHHhchhHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018342          283 TGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR  357 (357)
Q Consensus       283 fGl~FqlPlI~~lL~~lGivs~~~l~k~RRy~iv~i~IiaAilTP~pDiiSQlllaiPLilLYEisi~I~k~~~r  357 (357)
                      +|++||+|+++++|++.|++++++++|+|||++++++++||++||  |++||+++|+||++|||++++++++++|
T Consensus       160 fGl~FelPvi~~~L~~~Giv~~~~l~~~Rr~~iv~~~v~aAiiTP--D~~sq~llaiPl~lLYEisi~i~~~~~~  232 (249)
T 4b4a_A          160 FGIAFEMPIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAIIAP--DVSTQVLMAIPLLLLYEISIFLGKLATR  232 (249)
T ss_dssp             HHHHTSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHCS--SHHHHHHHHHHHHHHHHHHHHTCCC---
T ss_pred             HHHHHHHHHHHHHHHHcCCcCHHHHHHHhHHHHHHHHHHHHHHCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999  9999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00