Citrus Sinensis ID: 018400

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
Protein Sequence
MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccEEEEEEEEccHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHccEEEEEcEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgvdmgsmraalpSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFlfhrserpqltfSILCSFFLLsvfgcssqIFSFVgiqyssptlSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFvvtfykgppligelshsgsprrlllspqlswilGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVvsepsdwklglDIGLVAVLYSAVIGTGFRVGLCTWclsrtgplyvsmfkPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMwgkskeekttedcglgsvnssrekvpllqnrieen
Flexible Loop (DISEMBL)
MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEkttedcglgsvnssrekvpllqnrieen
Low Complexity Region (SEG)
MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAlsslfflfcsflfHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGElshsgsprrlllspqlsWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN
Disordered region (IsUnstruct)
***********LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG*********************************
Disordered Region (DISOPRED)
*************SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI*******************WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW**********************************
Disordered Region (DISEMBL)
MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS*************VNSSREKVPLLQNRIEEN
Disordered Region (DISPRO)
*****GSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL**************LSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS*******************************
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	356	2.2.26 [Sep-21-2011]
Q94JU2	367	WAT1-related protein At3g	yes	no	0.941	0.912	0.412	4e-61
Q9FL08	368	WAT1-related protein At5g	no	no	0.957	0.926	0.384	4e-60
Q945L4	339	WAT1-related protein At5g	no	no	0.890	0.935	0.378	2e-55
F4KHA8	370	WAT1-related protein At5g	no	no	0.957	0.921	0.363	4e-55
Q56X95	355	WAT1-related protein At3g	no	no	0.932	0.935	0.356	3e-50
Q9LRS5	353	WAT1-related protein At3g	no	no	0.870	0.878	0.393	3e-49
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.946	0.936	0.371	8e-48
F4JK59	347	WAT1-related protein At4g	no	no	0.938	0.962	0.355	1e-46
Q9LV20	383	WAT1-related protein At3g	no	no	0.842	0.783	0.345	2e-46
Q9FL41	402	WAT1-related protein At5g	no	no	0.882	0.781	0.322	4e-46

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  235 bits (599), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/361 (41%), Positives = 212/361 (58%), Gaps = 26/361 (7%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFF---LFCSFLFHR 65
           R  LP   +VI+  A V    + KAA  KG++ +V IVYS  L++L     LFCSF   R
Sbjct: 8   REVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSF---R 64

Query: 66  SER-PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFR 124
           S   P + FSIL    LL + GC S I  + GI YSSPTL++A+ NL PAFTF+LA++FR
Sbjct: 65  SRTLPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFR 124

Query: 125 LEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILG 184
           +E ++++  SS AK LGT  SIGGAF+VT Y GP +I +   S S R    +P   WILG
Sbjct: 125 MESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNPN--WILG 182

Query: 185 GFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVV-SEPSD--- 240
             FLA E F    W+I+Q  I+R++ A   +   + F++  +S   AL+ + +E +D   
Sbjct: 183 AGFLAVEYFCVPLWYIVQTQIMREYPAEFTV---VCFYSIGVSFWTALVTLFTEGNDLGA 239

Query: 241 WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGD 300
           WK+  +I LV+++ S + G+     + TW L   GPL+V+MFKPL+I  ++ M V+ + D
Sbjct: 240 WKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRD 299

Query: 301 AFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSRE----------KVPLLQ 350
           +  +GSLIGA +I  GFY VMWGK+KE    ED    +   + E          K PLL+
Sbjct: 300 SLYIGSLIGATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDSPSGSQKAPLLE 359

Query: 351 N 351
           +
Sbjct: 360 S 360

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  232 bits (591), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/354 (38%), Positives = 199/354 (56%), Gaps = 13/354 (3%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER 68
           R  +P   M  V  A V +  + KAA  +G++ YV + YS  +S+L  L  S +F RS R
Sbjct: 16  RDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSRR 75

Query: 69  -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
            P     +    FLL + G  SQI    GI YSSPTL++A+ NL PAFTF LA+IFR+E+
Sbjct: 76  LPAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQ 135

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQL-----SWI 182
           +   + ++QAK +G   SI GA VV  YKGP ++   S +     + L  QL     SWI
Sbjct: 136 VRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWI 195

Query: 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK 242
           +GG  LA++ F+ S W+ILQ  ++  +   + ++F+   F T++S    L   S  + W 
Sbjct: 196 IGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWV 255

Query: 243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
           L  DI L A++YS V  + F     TW L   GP+Y+S+F+PL+I  ++ M  + +GDA 
Sbjct: 256 LKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDAL 315

Query: 303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN 356
            LGS+IG+MI+  GFY V+WGK++E+      G        E+ PLL   I E+
Sbjct: 316 HLGSVIGSMILCIGFYTVIWGKAREDTIKTVAG-------SEQSPLLLTHIIED 362

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/338 (37%), Positives = 199/338 (58%), Gaps = 21/338 (6%)

Query: 17  MVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQLTFSI 75
           MV+   + V    ++KAA SKG++ +V++VYS    SL  L  +F   RS   P LTFSI
Sbjct: 17  MVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPLTFSI 76

Query: 76  LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSS 135
           LC+  +L +   + QI  + GI+YSSPTLS+AM N+ PAFTF+LA++FR+E ++   KSS
Sbjct: 77  LCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKSS 136

Query: 136 QAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMN 195
            AK LGT  SI GA VVT Y GP              +L+S    WI+GG  LA +  + 
Sbjct: 137 VAKVLGTILSIIGALVVTLYHGP--------------MLMSSHSDWIIGGGLLALQYILV 182

Query: 196 SAWFILQALILRKF-AAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLY 254
           S  +++ A  + ++ +AV++ + +      + +    L     P  W +  DI L+ V+ 
Sbjct: 183 SVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVA 242

Query: 255 SAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIV 314
           + ++ +G+ V + TW +S  GP+Y+SMFKPL+I+ + V   + +G++  LGS++G ++I 
Sbjct: 243 TGILNSGYYV-IHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILIS 301

Query: 315 AGFYAVMWGKSKEEKTTEDCGLGSVNSS-REKVPLLQN 351
            GFY V+WGK+KE+K      +G++ SS     PLL N
Sbjct: 302 IGFYMVLWGKAKEDKVDI---IGAIESSPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  215 bits (548), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 202/355 (56%), Gaps = 14/355 (3%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER 68
           R  +P   MV V    V +  + KAA  +G++ YV + Y+  +++L  L  S +F RS+R
Sbjct: 17  RDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKR 76

Query: 69  -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
            P     +  + FLL++ G  S I    GI+YSSPTL++A+ NL PAFTF LA+IFR+E+
Sbjct: 77  LPSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQ 136

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQL-----SWI 182
           +   + ++QAK +GT  SI GA VV  YKGP ++ + S +     + L   L     SWI
Sbjct: 137 IVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWI 196

Query: 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK 242
           +GG  LA +  + S W+ILQ  ++  +   + ++F      T++S    L    + + + 
Sbjct: 197 IGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFI 256

Query: 243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
           L   + L +V+YS  + + F   + TW L   GP+Y+S+FKPL+IV ++ M V+ +GDA 
Sbjct: 257 LKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDAL 316

Query: 303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLL-QNRIEEN 356
            LGS+IG++I+  GFY V+WGK++E+      G        E+ PLL  + IEE 
Sbjct: 317 YLGSVIGSLILSLGFYTVIWGKAREDSIKTVAG-------TEQSPLLPSHTIEEE 364

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  199 bits (506), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 200/362 (55%), Gaps = 30/362 (8%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCS-FLFHRSE 67
           R A+    M+      V+   + KAA SKG+N Y  ++YS  + S+  L    F +    
Sbjct: 9   RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRS 68

Query: 68  RPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
            P L+ SILC   +L + G +  I  F+GI+YS+PTL++A+ N+ PA TF+LAIIFR+EK
Sbjct: 69  LPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEK 128

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQL-------- 179
            +++ KSS AK +GT  S+ GA VV  Y GP +    + S  P      PQL        
Sbjct: 129 ASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRV---FTPSSPPF-----PQLRQLLLPLS 180

Query: 180 ----SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIV- 234
                WI+GG  LA +  +    FILQA I++ + A   + F+ F   +IL++   ++  
Sbjct: 181 SSNSDWIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAE 240

Query: 235 VSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMD 294
            + PS W +  DI LV ++   +   G+   +  W +   GP+Y+++F+PL+I+ +++M 
Sbjct: 241 KNNPSIWIIHFDITLVCIVVGGIFNPGYY-AIHLWAVRNKGPVYLAIFRPLSILIAVIMG 299

Query: 295 VVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIE 354
            + +GD+F LGSL+G ++I  GFY VMWGK+KE KT          S  E+ PLL   I+
Sbjct: 300 AIFLGDSFYLGSLVGGILISLGFYTVMWGKAKEGKT-------QFLSLSEETPLLDENID 352

Query: 355 EN 356
           + 
Sbjct: 353 DR 354

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  196 bits (497), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 190/330 (57%), Gaps = 20/330 (6%)

Query: 32  KAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQLTFSILCSFFLLSVFGCSSQ 90
           K A SKG+N Y  + YS  L+SL  L   F   RS   P L+ SIL    LL + G    
Sbjct: 33  KVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRSLPPLSLSILSKIGLLGLLGSMYV 92

Query: 91  IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAF 150
           I  ++GI+YSSPTL++A+ N+ PA TF+LAIIFR+EK++++ +SS AK +GT  S+ GA 
Sbjct: 93  ITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGAL 152

Query: 151 VVTFYKGPPLIGELSHSGSPRRL--------LLSPQLSWILGGFFLAAEAFMNSAWFILQ 202
           VV  Y GP     +  + SP  +        L S    W++GG  L       S  FILQ
Sbjct: 153 VVVLYHGP----RVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLTIRDIFVSVSFILQ 208

Query: 203 ALILRKFAAVLIIMFYLFFFNTILSTAFALIV-VSEPSDWKLGLDIGLVAVLYSAVIGTG 261
           A I+  + A   + F      +I+++   L+V  + PS W +  DI L+ ++  A+I + 
Sbjct: 209 AKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDITLITIVTMAIITSV 268

Query: 262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321
           + V + +W +   GPLY+++FKPL+I+ ++VM  V + D+  LG LIG ++I  GFYAVM
Sbjct: 269 YYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLGCLIGGLLITLGFYAVM 327

Query: 322 WGKSKEEKTTEDCGLGSVNSSREKVPLLQN 351
           WGK+ EEK   D  L  + S +E+ PLL N
Sbjct: 328 WGKANEEK---DQLL--LVSGKERTPLLLN 352

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  191 bits (485), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/358 (37%), Positives = 199/358 (55%), Gaps = 21/358 (5%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER 68
           R A+    M++V  + V    + K A SKG+N Y  + YS  L+SL  L   F  +RS  
Sbjct: 13  REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSS 72

Query: 69  PQLTFS-ILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
                  IL    LL   G    I  ++GI+YSSPTL++A+ N+ PA TF+LAIIFR+EK
Sbjct: 73  LPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEK 132

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRL---LLSPQLS---- 180
           ++++ +SS AK +GT  S+ GA VV FY GP     +  + SP  +     SP LS    
Sbjct: 133 VSFKERSSLAKLMGTILSLIGALVVIFYHGP----RVFLASSPPYVNFRQFSPPLSSSNS 188

Query: 181 -WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIV-VSEP 238
            W++GG  L  +    S  FILQA I+  + A   + F      +I+++   L+V  + P
Sbjct: 189 DWLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNP 248

Query: 239 SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIV 298
           S W +  DI L+ ++  A++ + + V + +W +   GPLY+++FKPL+I+ ++VM  + +
Sbjct: 249 SVWIIHFDITLITIVTMAIVTSVYYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFL 307

Query: 299 GDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN 356
            D+  LG LIG ++I  GFYAVMWGK+ EEK           S +EK PLL NR  + 
Sbjct: 308 NDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSF------SEKEKTPLLLNRKNDQ 359

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 197/349 (56%), Gaps = 15/349 (4%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER 68
           R  +P   M+ +    V +  + KAA  +G + YV + Y+   ++L  L  S +F RS  
Sbjct: 13  RDVVPFTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRS 72

Query: 69  -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
            P    S+    FLL++ G +S++    GI+YSSPTLS+A+ NL PAFTF+LAI FR+E+
Sbjct: 73  LPTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQ 132

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFF 187
           +   + ++QAK +GT  SI GA V+  YKGP L+   S +        S + SWI+GG  
Sbjct: 133 VMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFT--------SFESSWIIGGLL 184

Query: 188 LAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDI 247
           L  +  + S WFILQ  I+  +   + ++F      T++S    L+V  + + W+L    
Sbjct: 185 LGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGF 244

Query: 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL 307
            L +V+YS +  T     + TW L   GP+Y+S+FKPL+I  ++ M  + +GD   LGS+
Sbjct: 245 SLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSV 304

Query: 308 IGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN 356
           IG++I+  GFY V+WGK++E+ T       +V+ S + + L  +  EE+
Sbjct: 305 IGSVILSFGFYTVIWGKAREDSTK------TVSDSEQSLLLPSHDREED 347

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 172/301 (57%), Gaps = 1/301 (0%)

Query: 30  VIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88
           V + A++ G++K V  VY + L+ L     ++ F + ERP LT S+L  FF L++ G  +
Sbjct: 52  VSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTISLLAQFFFLALIGITA 111

Query: 89  SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGG 148
           +Q F  +G+ Y++PT ++AM N +PA TF++A   RLE ++   K   AK LGT  SIGG
Sbjct: 112 NQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRKHGVAKVLGTLVSIGG 171

Query: 149 AFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRK 208
           A V+T Y+G P+  +  +      +      S  LG  +L       + W +LQA +L++
Sbjct: 172 ATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLGWLYLMGHCLSWAGWMVLQAPVLKQ 231

Query: 209 FAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCT 268
           + A L +  +  FF  I     AL V ++ ++W +     L  +LY+ +I +G  V L T
Sbjct: 232 YPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIASGLVVYLQT 291

Query: 269 WCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEE 328
           WC+ ++GP++V++F+PL  +    M  +I+GD    G ++GA+ I+ G Y V+WGK++E 
Sbjct: 292 WCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYLVLWGKNEER 351

Query: 329 K 329
           K
Sbjct: 352 K 352

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  185 bits (470), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 182/326 (55%), Gaps = 12/326 (3%)

Query: 30  VIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88
           + K +++ G++ YV++VY  A+++      +F F R  +P++TFSI    F+L + G   
Sbjct: 35  ITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIFMQLFILGLLGPVI 94

Query: 89  SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGG 148
            Q F ++G++Y+SPT S AM N++PA TF+LA++FR+E L+ +    QAK  GT  ++ G
Sbjct: 95  DQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWCQAKIAGTVVTVAG 154

Query: 149 AFVVTFYKGPPL---------IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF 199
           A ++T YKGP +         I + SH+ +      S    ++ G   L       ++ F
Sbjct: 155 AMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSILLIFATLAWASLF 214

Query: 200 ILQALILRKFAAVLIIMFYLF-FFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVI 258
           +LQA IL+ +A   + +  L  F  T+ + A   ++   PS W++G D+ L+A  YS ++
Sbjct: 215 VLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIV 274

Query: 259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFY 318
            +     +    + + GP++ + F PL +V   VM   ++ +   LG +IGA++IV G Y
Sbjct: 275 ASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLY 334

Query: 319 AVMWGKSKEEKTTEDCGLGSVNSSRE 344
           AV+WGK KE + T  C L  ++S+ +
Sbjct: 335 AVLWGKQKENQVT-ICELAKIDSNSK 359

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
255581160	356	Auxin-induced protein 5NG4, putative [Ri	0.997	0.997	0.639	1e-126
225424736	346	PREDICTED: auxin-induced protein 5NG4 [V	0.963	0.991	0.559	1e-102
356502002	351	PREDICTED: auxin-induced protein 5NG4-li	0.952	0.965	0.551	1e-100
356497781	351	PREDICTED: LOW QUALITY PROTEIN: auxin-in	0.949	0.962	0.552	2e-99
224099697	355	predicted protein [Populus trichocarpa]	0.977	0.980	0.514	2e-94
296086518	356	unnamed protein product [Vitis vinifera]	0.971	0.971	0.541	6e-94
356497783	347	PREDICTED: auxin-induced protein 5NG4-li	0.941	0.965	0.516	8e-93
255581162	349	Auxin-induced protein 5NG4, putative [Ri	0.971	0.991	0.505	3e-92
357486015	598	Auxin-induced protein 5NG4 [Medicago tru	0.952	0.566	0.517	6e-91
388502250	352	unknown [Medicago truncatula]	0.977	0.988	0.504	1e-90

>gi|255581160|ref|XP_002531393.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528986|gb|EEF30977.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/355 (63%), Positives = 275/355 (77%)

Query: 1   MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCS 60
           MG    ++R+ LP VGMV+ +LAQ SNMEV K A+S+GINKYVIIVYSDALS+L  L CS
Sbjct: 1   MGFMPCNIRSLLPFVGMVVAMLAQASNMEVTKLALSQGINKYVIIVYSDALSTLVLLPCS 60

Query: 61  FLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLA 120
           F+ HRS+R  L FS+LC FFLLSVFG  +QI  +VG+QYSSPTL TAMLNLIPAFTF+LA
Sbjct: 61  FIIHRSDRTPLDFSLLCKFFLLSVFGWCAQICGYVGLQYSSPTLGTAMLNLIPAFTFILA 120

Query: 121 IIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLS 180
           IIFRLEKL+  +KSS AKSLGT  SI GAFVVTFY+GP + G  SH     +L  SPQ  
Sbjct: 121 IIFRLEKLDRRSKSSIAKSLGTIVSIAGAFVVTFYEGPTVFGIASHIKESHQLFHSPQFF 180

Query: 181 WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSD 240
           W++G  FLAAEA M+SAW+ILQ  IL+KF AVLII+ YL FFNT+LS  FALIVV + + 
Sbjct: 181 WMIGALFLAAEALMDSAWYILQTFILKKFPAVLIIICYLCFFNTVLSAIFALIVVEDRNS 240

Query: 241 WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGD 300
           WK+  +IGL  +LY+AVIG  FR+ L  WCLSRTGPLYV++FKPLAI+F+++MD +I+GD
Sbjct: 241 WKIKPNIGLATILYTAVIGLAFRISLVAWCLSRTGPLYVTLFKPLAIIFAVIMDAIILGD 300

Query: 301 AFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEE 355
             CLGSLIGA+IIV GFY VMWGK+KEEK  +D  +GS  SS + VPLL +  EE
Sbjct: 301 PLCLGSLIGAIIIVTGFYWVMWGKAKEEKAGDDSAVGSCESSSDNVPLLGDLAEE 355

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424736|ref|XP_002266139.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086519|emb|CBI32108.3| unnamed protein product [Vitis vinifera]

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/354 (55%), Positives = 260/354 (73%), Gaps = 11/354 (3%)

Query: 1   MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCS 60
           MGV MG++  +LP +GMVIV+  QV+NM V K AMS G++ +V+++YS+A+S++  L  S
Sbjct: 1   MGV-MGTV--SLPFLGMVIVVFTQVTNMIVSKMAMSNGLSSFVLVLYSNAISAVILLPLS 57

Query: 61  FLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLA 120
            LFHRS RP LTFSILC FFLL++ GC +QIF + G+QYSSPTL +AMLNL+PAFTF+LA
Sbjct: 58  LLFHRSPRPPLTFSILCRFFLLALIGCFAQIFGYAGVQYSSPTLGSAMLNLVPAFTFILA 117

Query: 121 IIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLS 180
           +I R+EKL  +  SS AKS+G   S+ GAFVVTFYKGPP++   S S S  + + S Q  
Sbjct: 118 VICRMEKLELKKSSSLAKSVGALVSVAGAFVVTFYKGPPIMFSSSFSDSSNQ-IFSSQSH 176

Query: 181 WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSD 240
           W+LGGF LA E+ + S W+ILQA IL+K  AVL I F+  FF +I+S A +L+   +PS 
Sbjct: 177 WVLGGFLLADESLLASMWYILQATILKKHPAVLTITFFYCFFISIISLAISLVAERDPSA 236

Query: 241 WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGD 300
           W+L LD+GL+AVLYSA++G   R+ +CTWC+ R GPL+ SMFKPL IVF+ VM V+  GD
Sbjct: 237 WRLKLDVGLLAVLYSAIVGNVIRISMCTWCVRRAGPLFCSMFKPLGIVFAFVMGVIFSGD 296

Query: 301 AFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIE 354
           A  LGSL+GA+IIV GFYAVMWGK+KE +       G +  SR KVPLLQN+ +
Sbjct: 297 ALHLGSLVGAIIIVTGFYAVMWGKAKEAEE------GRLECSR-KVPLLQNQTD 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502002|ref|XP_003519811.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/341 (55%), Positives = 245/341 (71%), Gaps = 2/341 (0%)

Query: 12  LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQL 71
           LP +GMV+V+LAQ  +M VIK AMS GINKYV++VYS ALS++  L  +   HRSERP L
Sbjct: 12  LPFLGMVLVMLAQSGSMVVIKVAMSDGINKYVMVVYSLALSTILLLPFALFLHRSERPPL 71

Query: 72  TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131
           TFS LC FFLL++FG S QI ++VGI  SS TL++AMLNLIPAFTF+LA+IFR+E+++W 
Sbjct: 72  TFSALCCFFLLAIFGSSGQIMAYVGIDLSSATLASAMLNLIPAFTFILALIFRMEEVHWR 131

Query: 132 NKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAE 191
           + SSQAK LGT  SIGGAFVV  YKGPP I +   S S  +L  S Q++WILGG F   +
Sbjct: 132 HSSSQAKVLGTLISIGGAFVVILYKGPP-IFKTHWSNSSNKLQFSQQINWILGGIFCVGD 190

Query: 192 AFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA 251
           + + S W+I QA +  KF AV +I+F+   F+TI    FALI V +P++W+L  DIGL+ 
Sbjct: 191 SIVCSLWYIYQASVAHKFPAVTVIVFFQLLFSTIQCAVFALIAVPDPTEWELKFDIGLIG 250

Query: 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAM 311
           +LY A+  T  R  LCTWC+ + GPL+ SMFKP++I+F++ M  + +GD   LGSLIGA+
Sbjct: 251 ILYQAIAATLIRYILCTWCVLKAGPLFCSMFKPVSIIFTVFMAAIFLGDDLSLGSLIGAV 310

Query: 312 IIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR 352
           IIV GFYAV+WGKS EE      G+ ++ SS   VPLLQNR
Sbjct: 311 IIVIGFYAVLWGKSIEENKIVK-GVENLESSCHNVPLLQNR 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497781|ref|XP_003517736.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like [Glycine max]

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 188/340 (55%), Positives = 245/340 (72%), Gaps = 2/340 (0%)

Query: 13  PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLT 72
           P +GMV+ +LAQ  +M VIK AM+ GINKYV++VYS ALS++  L  +   HRSERP LT
Sbjct: 13  PFLGMVMAMLAQSGSMVVIKVAMTDGINKYVMVVYSLALSTILLLPFALFLHRSERPPLT 72

Query: 73  FSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWEN 132
           FS LCSFFLL+ FG S QI ++VGI  SSPTL++AMLNLIPAFTF+LA+IFR+E+++W++
Sbjct: 73  FSALCSFFLLAFFGSSGQIMAYVGIDLSSPTLASAMLNLIPAFTFILALIFRMEEVHWKH 132

Query: 133 KSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEA 192
            SSQAK LGT  SI GAFVV  YKGPP+  +   S S  + L S QL+WILGG F A ++
Sbjct: 133 SSSQAKFLGTIVSIAGAFVVILYKGPPIF-KTHLSNSSNKFLFSQQLNWILGGMFCAGDS 191

Query: 193 FMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAV 252
            + S W+I QA +  K+ AV  I+F+   F+TI    FALIVV   ++W+L LDIGL+ +
Sbjct: 192 IVCSLWYIYQASVAYKYPAVTTIVFFQLLFSTIQCGVFALIVVQXSNEWELKLDIGLIGI 251

Query: 253 LYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMI 312
           +Y A+  T  R  LCTWC+ + GPL+ SMFKP+AI+FS+ M  + +GD   LGSLIGA+I
Sbjct: 252 VYQAIAATLIRYILCTWCVLKAGPLFCSMFKPVAIIFSVFMGAIFLGDDLSLGSLIGAVI 311

Query: 313 IVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR 352
           IV GFYAV+WGKS E+   E  G+ ++ SS   VPLLQNR
Sbjct: 312 IVIGFYAVLWGKSIEDNKIEK-GVENLESSCHNVPLLQNR 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099697|ref|XP_002311582.1| predicted protein [Populus trichocarpa] gi|222851402|gb|EEE88949.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 182/354 (51%), Positives = 240/354 (67%), Gaps = 6/354 (1%)

Query: 8   MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE 67
           ++AA P VGMV+   AQV  M + KAAMS G+  ++ ++YS+AL+SL  L  SF  HRSE
Sbjct: 3   LKAAAPFVGMVMAECAQVGLMILSKAAMSDGMTNFIFVLYSNALASLILLPSSFFLHRSE 62

Query: 68  RPQLTFSILCSFFLLSVFGCS-----SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII 122
           RP LTF ILC FFLL +FG +       IF + GI  SS TL TAMLNLIP  TF+LA+ 
Sbjct: 63  RPPLTFPILCGFFLLGLFGYAILIYFDFIFGYAGINLSSATLGTAMLNLIPGLTFILAVA 122

Query: 123 FRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWI 182
           FR+EKL+W++ S+  KS GT  S+ GAF+V +YKGPPL+   S S  P  LL S Q +WI
Sbjct: 123 FRMEKLDWKSSSALVKSTGTIVSVAGAFIVCYYKGPPLLMAPSTSNLPHELL-SQQQNWI 181

Query: 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK 242
           +GG  LA +  M SAW I+QALIL+K+ A LI++F+  F  TILST   L +  +P  W 
Sbjct: 182 IGGLLLAVDCVMASAWLIIQALILKKYPAELIVVFFYCFSVTILSTIVCLFMERDPGAWS 241

Query: 243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
           L   +  +AV+YS V G+ F+VG+ TWCL +TGP++V+MFKPL IV +  + ++ + D  
Sbjct: 242 LKPTVRWIAVVYSGVFGSAFQVGVSTWCLHKTGPVFVAMFKPLGIVIAAAVSIICLRDTL 301

Query: 303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEEN 356
            LGSL+GA +IV GFY+VMWGK+KEEK   D G+ S  SS +KVPLLQ+  EE 
Sbjct: 302 YLGSLVGATVIVIGFYSVMWGKAKEEKVGVDDGVRSFESSSQKVPLLQSHTEET 355

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086518|emb|CBI32107.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (898), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 239/347 (68%), Gaps = 1/347 (0%)

Query: 8   MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE 67
           M+ A    GMV+   AQV  M   KAA+S G+   V I+YS+ L+SL  L    LFHRS 
Sbjct: 3   MKGAAAYAGMVMAEFAQVGLMIASKAAISSGMPNLVFILYSNTLASLILLPSCLLFHRSP 62

Query: 68  RPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
           RPQLTFS+L  FFLL++ G  +QIF + GIQYSS TL TAMLNL+P FTF+LAIIFR+E+
Sbjct: 63  RPQLTFSLLSGFFLLALLGFFAQIFGYAGIQYSSATLGTAMLNLVPGFTFILAIIFRMER 122

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFF 187
           L+W   SS AKS+GT  SI GAF+VTFYKG P++   S S  P +L LS Q +W+ GG  
Sbjct: 123 LDWRG-SSMAKSMGTVVSIAGAFIVTFYKGSPILMTPSPSNFPDQLFLSQQSNWVFGGLL 181

Query: 188 LAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDI 247
           LAA+  M+SAW ILQA IL+K+ A LII FY  FF  I S A +LI+   P  W L    
Sbjct: 182 LAADCVMSSAWLILQASILKKYPAELIINFYYCFFVAIQSAAASLIMERGPGAWSLKPST 241

Query: 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL 307
             +AV+YS V G  F+VG  TWC+ + GP++V+MFKP+ IV ++ M V+ +GD F +GSL
Sbjct: 242 RFIAVMYSGVFGYVFQVGAITWCVHQKGPVFVAMFKPVGIVVAVAMGVIFLGDTFYMGSL 301

Query: 308 IGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIE 354
           IGA +IV GFY+VMWGK+KEEK  ED G+ S+ S+ +K PLLQN IE
Sbjct: 302 IGATVIVIGFYSVMWGKAKEEKIDEDIGMRSLESTSQKAPLLQNYIE 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497783|ref|XP_003517737.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  346 bits (888), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 239/341 (70%), Gaps = 6/341 (1%)

Query: 12  LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQL 71
           LP +GM++ +L Q  +M VIK AM+ G+NKYV++VYS ALSS   L      HRSE P L
Sbjct: 12  LPFLGMLMAMLTQSGSMVVIKFAMTDGMNKYVMVVYSMALSSSILLPFVLFLHRSELPLL 71

Query: 72  TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131
           T   L SFFLL++F  S+ I ++VGI+ SSPTL++A+LN+IPAFTFVLA+IFR+E+++W 
Sbjct: 72  TVPALGSFFLLALFASSAHIMAYVGIELSSPTLASAILNVIPAFTFVLALIFRMEEVHWR 131

Query: 132 NKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAE 191
             SSQAK LGT  SIGGAFVV  YKGPP+    S S +  +L  S Q +WILGG FL A+
Sbjct: 132 YFSSQAKVLGTIVSIGGAFVVILYKGPPIFRTHS-SYTSNKLQFSAQPNWILGGIFLVAD 190

Query: 192 AFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA 251
           +F++S W+I QA + +K+ AV +I+F+ F F+TI    FALI V +P++W+L  D GL  
Sbjct: 191 SFLSSMWYIYQASVAKKYPAVTVIVFFQFLFSTIQCGVFALIAVRDPTEWELKFDRGLSV 250

Query: 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAM 311
           +LY A++ T  R  L TWC+ R GPL+ +MFKP+ I+F++ M  + +G+ F LGSLIGA+
Sbjct: 251 ILYQAIVATMLRYTLTTWCVHRAGPLFCAMFKPVGIIFTVSMSAIFLGENFGLGSLIGAV 310

Query: 312 IIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR 352
           IIV GFYAV+WG S+EE   E+     + SS    PLLQ+R
Sbjct: 311 IIVIGFYAVLWGNSREENKIEN-----LESSSHNAPLLQDR 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581162|ref|XP_002531394.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528987|gb|EEF30978.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 176/348 (50%), Positives = 241/348 (69%), Gaps = 2/348 (0%)

Query: 8   MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE 67
           M+ ALP VGMVI   AQV  M + K AMSKG++ ++ + YS+AL+SL  L  S L  R+E
Sbjct: 3   MKVALPFVGMVIAECAQVGLMIISKVAMSKGMSSFIFVCYSNALASLILLPFSLLHRRTE 62

Query: 68  RPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
           RP LTFSI+C FFLL +FGC +Q F + GI  SSPTL TAMLNL+P  TF+LA+ FR+EK
Sbjct: 63  RPPLTFSIVCGFFLLGLFGCLAQFFGYAGINLSSPTLGTAMLNLVPGLTFILAVAFRMEK 122

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFF 187
           L+    SS AKS+GT  S+GGAF++T+YKGP ++  L+ S +    LL+   +WI+GG  
Sbjct: 123 LDGRTSSSLAKSMGTIISVGGAFILTYYKGPLVL--LTPSLNSSHQLLTQPSNWIIGGLL 180

Query: 188 LAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDI 247
           LAA+  M SAW I+QALIL+ + A LII+F+  FF TILS    L+V  +PS W L  +I
Sbjct: 181 LAADCVMTSAWIIIQALILKIYPAELIIVFFYCFFVTILSAIVCLVVERDPSAWSLIPNI 240

Query: 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL 307
            LV+VLYS V G+  +VG+ TWCL +TGP++VSMFKPL I+ +  + V+ +GD   LGS+
Sbjct: 241 RLVSVLYSGVFGSALQVGISTWCLRQTGPVFVSMFKPLGIIIAAAVGVICLGDTLYLGSI 300

Query: 308 IGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEE 355
           IG +I   G+Y VMWG+++E+   +   +   ++S EKVPLLQ++  E
Sbjct: 301 IGTVICGMGYYTVMWGQAREDGKQKPHDVERADTSDEKVPLLQDQDAE 348

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486015|ref|XP_003613295.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355514630|gb|AES96253.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  340 bits (872), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 246/342 (71%), Gaps = 3/342 (0%)

Query: 12  LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQL 71
           LP VGM+I +LAQ  +M VIK AM  G+NKYV++VYS  LSS+  L  +   +RS+RP L
Sbjct: 260 LPFVGMIISVLAQSGSMVVIKFAMKDGMNKYVMVVYSMGLSSILLLPLALFINRSQRPPL 319

Query: 72  TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131
           TFS L SFFLL++ G S+QI ++ GI+ SSPTL++AMLNLIPAFTFVLA+IFR+E++ W 
Sbjct: 320 TFSALWSFFLLALIGSSAQIMTYGGIELSSPTLASAMLNLIPAFTFVLALIFRMERIYWR 379

Query: 132 NKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAE 191
           + SSQAK++GT  S+ GAFVV  YKGPP++ ++  S S   L  SP L+WILGGF  A +
Sbjct: 380 HFSSQAKAIGTIVSMAGAFVVILYKGPPIL-KIHSSISYNTLQFSPNLNWILGGFLCAGD 438

Query: 192 AFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA 251
           + ++S W+I Q  + +K+ AV++I+F+   F TI +  +ALIVV +PS W+L LD+GL+ 
Sbjct: 439 SLLSSMWYIYQVSVTKKYPAVIVIVFFQVVFITIQTGVYALIVVRDPSAWELKLDMGLIV 498

Query: 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAM 311
           +LY AV   G R  L TW + R GPL+ +MFKP+ I+F++ +  + +GD F LGSLIGA+
Sbjct: 499 ILYQAVAAIGIRYFLQTWSVQRAGPLFCAMFKPIGIIFTVFLGSIFLGDDFYLGSLIGAV 558

Query: 312 IIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRI 353
           IIV GFYAV WGK+ EEK  +  G+ ++ +    VPLLQN++
Sbjct: 559 IIVVGFYAVQWGKASEEKVEK--GIENLETQSNVVPLLQNKV 598

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502250|gb|AFK39191.1| unknown [Medicago truncatula]

 Score =  339 bits (870), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 177/351 (50%), Positives = 248/351 (70%), Gaps = 3/351 (0%)

Query: 3   VDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFL 62
           +++      LP VGM+I +LAQ  +M VIK AM  G+NKYV++VYS  LSS+  L  +  
Sbjct: 5   LNLNGTSKLLPFVGMIISVLAQSGSMVVIKFAMKDGMNKYVMVVYSMGLSSILLLPLALF 64

Query: 63  FHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII 122
            +RS+RP LTFS L SFFLL++ G S+QI ++ GI+ SSPTL++AMLNLIPAFTFVLA+I
Sbjct: 65  INRSQRPPLTFSALWSFFLLALIGSSAQIMTYGGIELSSPTLASAMLNLIPAFTFVLALI 124

Query: 123 FRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWI 182
           FR+E++ W + SSQAK++GT  S+ GAFVV  YKGPP++ ++  S S   L  SP L+WI
Sbjct: 125 FRMERIYWRHFSSQAKAIGTIVSMAGAFVVILYKGPPIL-KIHSSISYNTLQFSPNLNWI 183

Query: 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK 242
           LGGF  A ++ ++S W+I Q  + +K+ AV++I+F+   F TI +  +ALIVV +PS W+
Sbjct: 184 LGGFLCAGDSLLSSMWYIYQVSVTKKYPAVIVIVFFQVVFITIQTGVYALIVVRDPSAWE 243

Query: 243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
           L LD+GL+ +LY AV   G R  L TW + R GPL+ +MFKP+ I+F++ +  +  GD F
Sbjct: 244 LKLDMGLIVILYQAVAAIGIRYFLQTWSVQRAGPLFCAMFKPIGIIFTVFLGSIFFGDDF 303

Query: 303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRI 353
            LGSLIGA+IIV GFYAV WGK+ EEK  +  G+ ++ +    VPLLQN++
Sbjct: 304 YLGSLIGAVIIVVGFYAVQWGKASEEKVEK--GIENLETQSNVVPLLQNKV 352

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.901	0.874	0.407	3.2e-58
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.952	0.954	0.351	4.3e-54
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.893	0.938	0.362	1.2e-51
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.882	0.904	0.346	3.1e-51
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.955	0.918	0.341	5.1e-51
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.946	0.936	0.357	1.3e-50
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.946	0.954	0.358	9.5e-50
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.882	0.877	0.352	2e-47
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.842	0.783	0.332	4.8e-46
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.887	0.786	0.310	9.1e-45

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 134/329 (40%), Positives = 185/329 (56%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R  LP   +VI+  A V    + KAA  KG++ +V IVYS                RS  
Sbjct:     8 REVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRT 67

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P + FSIL    LL + GC S I  + GI YSSPTL++A+ NL PAFTF+LA++FR+E 
Sbjct:    68 LPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMES 127

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEXXXXXXXXXXXXXXXXXWILGGFF 187
             ++++  SS AK LGT  SIGGAF+VT Y GP +I +                 WILG  F
Sbjct:   128 VSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNPN--WILGAGF 185

Query:   188 LAAEAFMNSAWFILQALILRKFAAVL-IIMFYLF--FFNTILSTAFALIVVSEPSDWKLG 244
             LA E F    W+I+Q  I+R++ A   ++ FY     F T L T F     ++   WK+ 
Sbjct:   186 LAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFT--EGNDLGAWKIK 243

Query:   245 LDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCL 304
              +I LV+++ S + G+     + TW L   GPL+V+MFKPL+I  ++ M V+ + D+  +
Sbjct:   244 PNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYI 303

Query:   305 GSLIGAMIIVAGFYAVMWGKSKEEKTTED 333
             GSLIGA +I  GFY VMWGK+KE    ED
Sbjct:   304 GSLIGATVITIGFYTVMWGKAKEVALVED 332

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 124/353 (35%), Positives = 191/353 (54%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R A+    M+      V+   + KAA SKG+N Y  ++YS               +RS  
Sbjct:     9 RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRS 68

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P L+ SILC   +L + G +  I  F+GI+YS+PTL++A+ N+ PA TF+LAIIFR+EK
Sbjct:    69 LPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEK 128

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGP----PLIGEXXXXXXXXXXXXXXXXXWIL 183
              +++ KSS AK +GT  S+ GA VV  Y GP    P                     WI+
Sbjct:   129 ASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDWII 188

Query:   184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVV-SEPSDWK 242
             GG  LA +  +    FILQA I++ + A   + F+ F   +IL++   ++   + PS W 
Sbjct:   189 GGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWI 248

Query:   243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
             +  DI LV ++   +   G+   +  W +   GP+Y+++F+PL+I+ +++M  + +GD+F
Sbjct:   249 IHFDITLVCIVVGGIFNPGY-YAIHLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSF 307

Query:   303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNRIEE 355
              LGSL+G ++I  GFY VMWGK+KE KT          S  E+ PLL   I++
Sbjct:   308 YLGSLVGGILISLGFYTVMWGKAKEGKT-------QFLSLSEETPLLDENIDD 353

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 122/337 (36%), Positives = 189/337 (56%)

Query:    17 MVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER-PQLTFSI 75
             MV+   + V    ++KAA SKG++ +V++VYS                RS   P LTFSI
Sbjct:    17 MVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPLTFSI 76

Query:    76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSS 135
             LC+  +L +   + QI  + GI+YSSPTLS+AM N+ PAFTF+LA++FR+E ++   KSS
Sbjct:    77 LCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKSS 136

Query:   136 QAKSLGTFASIGGAFVVTFYKGPPLIGEXXXXXXXXXXXXXXXXXWILGGFFLAAEAFMN 195
              AK LGT  SI GA VVT Y GP L+                   WI+GG  LA +  + 
Sbjct:   137 VAKVLGTILSIIGALVVTLYHGPMLMSSHSD--------------WIIGGGLLALQYILV 182

Query:   196 SAWFILQALILRKF-AAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLY 254
             S  +++ A  + ++ +AV++ + +      + +    L     P  W +  DI L+ V+ 
Sbjct:   183 SVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVA 242

Query:   255 SAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIV 314
             + ++ +G+ V + TW +S  GP+Y+SMFKPL+I+ + V   + +G++  LGS++G ++I 
Sbjct:   243 TGILNSGYYV-IHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILIS 301

Query:   315 AGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQN 351
              GFY V+WGK+KE+K      + S  S     PLL N
Sbjct:   302 IGFYMVLWGKAKEDKVDIIGAIES--SPSHNAPLLDN 336

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 112/323 (34%), Positives = 174/323 (53%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R  +P   M+ +    V +  + KAA  +G + YV + Y+                RS  
Sbjct:    13 RDVVPFTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRS 72

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P    S+    FLL++ G +S++    GI+YSSPTLS+A+ NL PAFTF+LAI FR+E+
Sbjct:    73 LPTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQ 132

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEXXXXXXXXXXXXXXXXXWILGGFF 187
             +   + ++QAK +GT  SI GA V+  YKGP L+                   WI+GG  
Sbjct:   133 VMLRSSATQAKIIGTIVSISGALVIVLYKGPKLL--------VAASFTSFESSWIIGGLL 184

Query:   188 LAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDI 247
             L  +  + S WFILQ  I+  +   + ++F      T++S    L+V  + + W+L    
Sbjct:   185 LGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGF 244

Query:   248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL 307
              L +V+YS +  T     + TW L   GP+Y+S+FKPL+I  ++ M  + +GD   LGS+
Sbjct:   245 SLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSV 304

Query:   308 IGAMIIVAGFYAVMWGKSKEEKT 330
             IG++I+  GFY V+WGK++E+ T
Sbjct:   305 IGSVILSFGFYTVIWGKAREDST 327

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 121/354 (34%), Positives = 188/354 (53%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R  +P   MV V    V +  + KAA  +G++ YV + Y+                RS+R
Sbjct:    17 RDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKR 76

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P     +  + FLL++ G  S I    GI+YSSPTL++A+ NL PAFTF LA+IFR+E+
Sbjct:    77 LPSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQ 136

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEXXXX-----XXXXXXXXXXXXXWI 182
             +   + ++QAK +GT  SI GA VV  YKGP ++ +                      WI
Sbjct:   137 IVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWI 196

Query:   183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK 242
             +GG  LA +  + S W+ILQ  ++  +   + ++F      T++S    L    + + + 
Sbjct:   197 IGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFI 256

Query:   243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
             L   + L +V+YS  + + F   + TW L   GP+Y+S+FKPL+IV ++ M V+ +GDA 
Sbjct:   257 LKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDAL 316

Query:   303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR-IEE 355
              LGS+IG++I+  GFY V+WGK++E+      G        E+ PLL +  IEE
Sbjct:   317 YLGSVIGSLILSLGFYTVIWGKAREDSIKTVAGT-------EQSPLLPSHTIEE 363

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 125/350 (35%), Positives = 188/350 (53%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R A+    M++V  + V    + K A SKG+N Y  + YS               +RS  
Sbjct:    13 REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSS 72

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P L+ SIL    LL   G    I  ++GI+YSSPTL++A+ N+ PA TF+LAIIFR+EK
Sbjct:    73 LPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEK 132

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEXX----XXXXXXXXXXXXXXXWIL 183
             ++++ +SS AK +GT  S+ GA VV FY GP +                        W++
Sbjct:   133 VSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLI 192

Query:   184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMF-YLFFFNTILSTAFALIVVSEPSDWK 242
             GG  L  +    S  FILQA I+  + A   + F Y    + + ST   ++  + PS W 
Sbjct:   193 GGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWI 252

Query:   243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
             +  DI L+ ++  A++ + + V + +W +   GPLY+++FKPL+I+ ++VM  + + D+ 
Sbjct:   253 IHFDITLITIVTMAIVTSVYYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSL 311

Query:   303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR 352
              LG LIG ++I  GFYAVMWGK+ EEK  +        S +EK PLL NR
Sbjct:   312 YLGCLIGGILITLGFYAVMWGKANEEK--DQLSF----SEKEKTPLLLNR 355

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 125/349 (35%), Positives = 185/349 (53%)

Query:     9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER 68
             R A+    M+      V    + K A SKG+N Y  + YS                RS  
Sbjct:    10 REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRS 69

Query:    69 -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
              P L+ SIL    LL + G    I  ++GI+YSSPTL++A+ N+ PA TF+LAIIFR+EK
Sbjct:    70 LPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEK 129

Query:   128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEXX----XXXXXXXXXXXXXXXWIL 183
             ++++ +SS AK +GT  S+ GA VV  Y GP +                        W++
Sbjct:   130 VSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWLI 189

Query:   184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVV-SEPSDWK 242
             GG  L       S  FILQA I+  + A   + F      +I+++   L+V  + PS W 
Sbjct:   190 GGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWI 249

Query:   243 LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAF 302
             +  DI L+ ++  A+I + + V + +W +   GPLY+++FKPL+I+ ++VM  V + D+ 
Sbjct:   250 IRFDITLITIVTMAIITSVYYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSL 308

Query:   303 CLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQN 351
              LG LIG ++I  GFYAVMWGK+ EEK   D  L  + S +E+ PLL N
Sbjct:   309 YLGCLIGGLLITLGFYAVMWGKANEEK---DQLL--LVSGKERTPLLLN 352

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 115/326 (35%), Positives = 177/326 (54%)

Query:    30 VIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSER-PQLTFSILCSFFLLSVFGCS 88
             + K A SKG+N Y  + YS               +RS   P L+ SIL    LL   G  
Sbjct:    31 LFKVATSKGLNIYPFLSYSYLLASLLLLPSLFFTNRSRSLPPLSASILSKIGLLGFLGSM 90

Query:    89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGG 148
               I   +GI+YS+PTL++A+ N++PA TF+LA+IFR+EK++++ +SS AK +GT  S+ G
Sbjct:    91 YVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKERSSVAKVMGTILSLIG 150

Query:   149 AFVVTFYKGPPLIGEXX----XXXXXXXXXXXXXXXWILGGFFLAAEAFMNSAWFILQAL 204
             AFVV FY GP +                        W++GG  L  +    S  FILQ  
Sbjct:   151 AFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILTIQGIFVSVSFILQTH 210

Query:   205 ILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR 263
             I+R++  A  + + Y+   + + S    ++  + PS W +  DI L  ++ + +I + + 
Sbjct:   211 IMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDITLFTIVTTGIITSVYY 270

Query:   264 VGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323
             V + +W +    PLY+++FKPL+I+ ++VM  + + D+  LG LIG ++I  GFY VMWG
Sbjct:   271 V-IHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLIGGILITLGFYVVMWG 329

Query:   324 KSKEEKTTEDCGLGSVNSSREKVPLL 349
             K+ EEK      L S  S +EK PLL
Sbjct:   330 KANEEKNK----LLSF-SGKEKTPLL 350

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 100/301 (33%), Positives = 163/301 (54%)

Query:    30 VIKAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSERPQLTFSILCSFFLLSVFGCSS 89
             V + A++ G++K V  VY +               + ERP LT S+L  FF L++ G ++
Sbjct:    52 VSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPPLTISLLAQFFFLALIGITA 111

Query:    90 -QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGG 148
              Q F  +G+ Y++PT ++AM N +PA TF++A   RLE ++   K   AK LGT  SIGG
Sbjct:   112 NQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRKHGVAKVLGTLVSIGG 171

Query:   149 AFVVTFYKGPPLIGEXXXXXXXXXXXXXXXXXWILGGFFLAAEAFMNSAWFILQALILRK 208
             A V+T Y+G P+  +                   LG  +L       + W +LQA +L++
Sbjct:   172 ATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLGWLYLMGHCLSWAGWMVLQAPVLKQ 231

Query:   209 FAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCT 268
             + A L +  +  FF  I     AL V ++ ++W +     L  +LY+ +I +G  V L T
Sbjct:   232 YPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIASGLVVYLQT 291

Query:   269 WCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEE 328
             WC+ ++GP++V++F+PL  +    M  +I+GD    G ++GA+ I+ G Y V+WGK++E 
Sbjct:   292 WCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYLVLWGKNEER 351

Query:   329 K 329
             K
Sbjct:   352 K 352

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 102/329 (31%), Positives = 173/329 (52%)

Query:    26 SNMEVI-KAAMSKGINKYVIIVYSDAXXXXXXXXXXXXXHRSERPQLTFSILCSFFLLSV 84
             + M +I K +++ G++ YV++VY  A              R  +P++TFSI    F+L +
Sbjct:    30 AGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIFMQLFILGL 89

Query:    85 FG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTF 143
              G    Q F ++G++Y+SPT S AM N++PA TF+LA++FR+E L+ +    QAK  GT 
Sbjct:    90 LGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWCQAKIAGTV 149

Query:   144 ASIGGAFVVTFYKGPPL---------IGEXXXXXXXXXXXXXXXXXWILGGFFLAAEAFM 194
              ++ GA ++T YKGP +         I +                 ++ G   L      
Sbjct:   150 VTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSILLIFATLA 209

Query:   195 NSAWFILQALILRKFAA-VLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVL 253
              ++ F+LQA IL+ +A   L +   + F  T+ + A   ++   PS W++G D+ L+A  
Sbjct:   210 WASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAA 269

Query:   254 YSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII 313
             YS ++ +     +    + + GP++ + F PL +V   VM   ++ +   LG +IGA++I
Sbjct:   270 YSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLI 329

Query:   314 VAGFYAVMWGKSKEEKTTEDCGLGSVNSS 342
             V G YAV+WGK KE + T  C L  ++S+
Sbjct:   330 VIGLYAVLWGKQKENQVTI-CELAKIDSN 357

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94JU2	WTR18_ARATH	No assigned EC number	0.4127	0.9410	0.9128	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028878001 SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (364 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	356
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-63
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	8e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  205 bits (524), Expect = 2e-63
 Identities = 138/354 (38%), Positives = 203/354 (57%), Gaps = 20/354 (5%)

Query: 9   RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER 68
           R A+    M+    + V    + K A SKG+N Y  + YS  L+SL  L   F  +RS  
Sbjct: 10  REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS 69

Query: 69  -PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEK 127
            P L+ SIL    LL   G    I  ++GI+YS+PTL++A+ N+ PA TF+LAIIFR+EK
Sbjct: 70  LPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEK 129

Query: 128 LNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRL---LLSPQLS---- 180
           ++++ +SS AK +GT  S+ GA VV FY GP     +  + SP  L    LSP LS    
Sbjct: 130 VSFKERSSVAKVMGTILSLIGALVVIFYHGP----RVFVASSPPYLNFRQLSPPLSSSNS 185

Query: 181 -WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIV-VSEP 238
            W++GG  L  +    S  FILQA I+ ++ A   + F      +I+++   L+V  + P
Sbjct: 186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP 245

Query: 239 SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIV 298
           S W +  DI L+ ++  A+I + + V + +W +   GPLY+++FKPL+I+ ++VM  + +
Sbjct: 246 SVWIIHFDITLITIVTMAIITSVYYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFL 304

Query: 299 GDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTEDCGLGSVNSSREKVPLLQNR 352
            D+  LG LIG ++I  GFYAVMWGK+ EEK      L S  S +EK PLL N 
Sbjct: 305 NDSLYLGCLIGGILITLGFYAVMWGKANEEKDQ----LLSF-SGKEKTPLLLNG 353

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 52/321 (16%), Positives = 111/321 (34%), Gaps = 29/321 (9%)

Query: 7   SMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRS 66
             RA L  +  +++         +      + ++ ++       L +   L    L    
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR 60

Query: 67  ERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLE 126
                    L    L  +      +  F+ ++Y+S ++++ ++ L+P FT +LA++  L 
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 127 KLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGF 186
           +     + S  + LG   ++ G  ++               G    L L   L  +    
Sbjct: 121 E-----RLSLLQILGILLALAGVLLILL-----------GGGGGGILSLLGLLLALAAAL 164

Query: 187 FLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLD 246
             A           L   ++++ + +  +   L     +      L  +S      L   
Sbjct: 165 LWA-----------LYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRA 213

Query: 247 IGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGS 306
             L+  LY  V  TG    L  + L   G   V++   L  VF+ ++ V+++G+      
Sbjct: 214 WLLL--LYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ 271

Query: 307 LIGAMIIVAGFYAVMWGKSKE 327
           L+GA ++V G         + 
Sbjct: 272 LLGAALVVLGVLLASLRARRR 292

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	356
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.98
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.91
COG2962	293	RarD Predicted permeases [General function predict	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.75
KOG2766	336	consensus Predicted membrane protein [Function unk	99.72
COG2510	140	Predicted membrane protein [Function unknown]	99.64
COG2510	140	Predicted membrane protein [Function unknown]	99.62
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.61
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.6
KOG1580	337	consensus UDP-galactose transporter related protei	99.58
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.54
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.52
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.5
KOG1581	327	consensus UDP-galactose transporter related protei	99.46
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.22
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.2
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.11
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.11
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.1
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.1
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.1
PRK15430	296	putative chloramphenical resistance permease RarD;	99.06
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.06
PRK13499	345	rhamnose-proton symporter; Provisional	99.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.04
PRK11272	292	putative DMT superfamily transporter inner membran	99.03
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.99
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.98
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.97
PRK11689	295	aromatic amino acid exporter; Provisional	98.96
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.89
PLN00411	358	nodulin MtN21 family protein; Provisional	98.89
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.83
KOG1582	367	consensus UDP-galactose transporter related protei	98.82
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.73
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.69
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.63
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.6
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.56
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.52
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.5
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.49
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.47
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.44
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.27
COG2962	293	RarD Predicted permeases [General function predict	98.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.23
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.17
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.15
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.12
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.11
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.96
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.85
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.81
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.71
PRK11431	105	multidrug efflux system protein; Provisional	97.67
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.61
COG2076	106	EmrE Membrane transporters of cations and cationic	97.61
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.58
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.43
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.39
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.38
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.32
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.29
PRK11431	105	multidrug efflux system protein; Provisional	97.26
COG2076	106	EmrE Membrane transporters of cations and cationic	97.23
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.23
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.19
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.0
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.72
KOG2765	416	consensus Predicted membrane protein [Function unk	96.52
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.45
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.44
PRK13499	345	rhamnose-proton symporter; Provisional	96.42
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.25
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.12
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.09
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.89
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.77
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.73
KOG1581	327	consensus UDP-galactose transporter related protei	95.55
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.21
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.03
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.77
KOG1580	337	consensus UDP-galactose transporter related protei	94.3
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.34
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.27
KOG4831	125	consensus Unnamed protein [Function unknown]	88.49
PRK02237	109	hypothetical protein; Provisional	88.37
KOG1443	349	consensus Predicted integral membrane protein [Fun	86.57
KOG4831	125	consensus Unnamed protein [Function unknown]	84.3
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	83.58
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.14
KOG1582	367	consensus UDP-galactose transporter related protei	81.16
KOG3912	372	consensus Predicted integral membrane protein [Gen	81.1

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=3.1e-39  Score=304.28  Aligned_cols=311  Identities=37%  Similarity=0.642  Sum_probs=250.6

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhcc-CCCCCCcHHHHHHHHHHHHHHH
Q 018400            9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHR-SERPQLTFSILCSFFLLSVFGC   87 (356)
Q Consensus         9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   87 (356)
                      +..+++..+++..+..+...++.|.+++++++|..+.++|+.++++++.++.++++| +.+++.+++++..+.+.|+++.
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            367899999999999999999999999989999999999999999999988776554 3335556788899999999987


Q ss_pred             HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHH------hhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400           88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIF------RLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI  161 (356)
Q Consensus        88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~------l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~  161 (356)
                      .++.+++.|++|+++++++++.++.|+++.++++++      +|||++++      +++|++++++|+.++...+++...
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~  163 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVF  163 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcccc
Confidence            777899999999999999999999999999999999      69999999      999999999999988643333211


Q ss_pred             cCCCCCC---C-CCcc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 018400          162 GELSHSG---S-PRRL-LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVS  236 (356)
Q Consensus       162 ~~~~~~~---~-~~~~-~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  236 (356)
                      .. ++++   + .+.. +..+..+...|++++++++++||+|++++|+..+++++....++++..++.+...+.....++
T Consensus       164 ~~-~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~  242 (358)
T PLN00411        164 VA-SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK  242 (358)
T ss_pred             cc-cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence            00 0000   0 0000 111223446799999999999999999999999998745577778888777777766665543


Q ss_pred             C-CCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHH
Q 018400          237 E-PSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVA  315 (356)
Q Consensus       237 ~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~  315 (356)
                      . ...|....+.....++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|++
T Consensus       243 ~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~  321 (358)
T PLN00411        243 NNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL  321 (358)
T ss_pred             CCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            2 233322223334557777764 67899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhheeccccc
Q 018400          316 GFYAVMWGKSKE  327 (356)
Q Consensus       316 g~~l~~~~~~~~  327 (356)
                      |+++..+.|+||
T Consensus       322 Gv~l~~~~~~~~  333 (358)
T PLN00411        322 GFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHhhhhhh
Confidence            999998765544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=8.6e-34  Score=262.53  Aligned_cols=284  Identities=12%  Similarity=0.075  Sum_probs=235.2

Q ss_pred             hHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400            7 SMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG   86 (356)
Q Consensus         7 ~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   86 (356)
                      .++-..-.+.+++..++||.+++..|...+ +++|..++++|+..++++++++...++++ +  .+++++......|.++
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--~~~~~~~~~~~~g~~~   78 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHP-L--PTLRQWLNAALIGLLL   78 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--CcHHHHHHHHHHHHHH
Confidence            334444567788888999999999999998 89999999999999999988876544332 2  2457788888888887


Q ss_pred             -HHHHHHHHHHh-hccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400           87 -CSSQIFSFVGI-QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL  164 (356)
Q Consensus        87 -~~~~~~~~~al-~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~  164 (356)
                       ..++.+++.+. ++++++.++++.++.|+++.+++++ +|||++++      ++.|++++++|+.++.. . .      
T Consensus        79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~-~------  143 (292)
T PRK11272         79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-G-G------  143 (292)
T ss_pred             HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-C-c------
Confidence             77888999999 9999999999999999999999985 69999999      99999999999988742 1 1      


Q ss_pred             CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 018400          165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLG  244 (356)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  244 (356)
                                  ..+....|++++++++++||.|.+..||..++  ++...+++++..+.+...+.....+.+..  ...
T Consensus       144 ------------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  207 (292)
T PRK11272        144 ------------NLSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALP  207 (292)
T ss_pred             ------------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccC
Confidence                        11233579999999999999999999997543  25566778888888887777654332211  112


Q ss_pred             chhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          245 LDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       245 ~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      +...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++..+.+
T Consensus       208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            33468889999999999999999999999999999999999999999999999999999999999999999999986544


Q ss_pred             c
Q 018400          325 S  325 (356)
Q Consensus       325 ~  325 (356)
                      +
T Consensus       288 ~  288 (292)
T PRK11272        288 Y  288 (292)
T ss_pred             h
Confidence            3

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=1.2e-32  Score=255.73  Aligned_cols=278  Identities=18%  Similarity=0.197  Sum_probs=217.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHH
Q 018400           14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIF   92 (356)
Q Consensus        14 ~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~   92 (356)
                      .+..++++++||.++++.|...+ +++|..+.++|+.++++.+.++.  +++    +.++   ......|++. .....+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~~~----~~~~---~~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--ARP----KVPL---NLLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--cCC----CCch---HHHHHHHHHHHHHHHHH
Confidence            45678899999999999999998 89999999999999876655532  221    1122   2344446655 556667


Q ss_pred             HHHHhhc-cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400           93 SFVGIQY-SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR  171 (356)
Q Consensus        93 ~~~al~~-~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~  171 (356)
                      ++.+++| .++++++++.++.|+++.+++++++|||++++      ++++++++++|+.++..  +..            
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~~------------  135 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DSL------------  135 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--ccC------------
Confidence            8899998 57899999999999999999999999999999      99999999999998862  111            


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHHHHHHhcCCC---cccccch
Q 018400          172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAA--VLIIMFYLFFFNTILSTAFALIVVSEPS---DWKLGLD  246 (356)
Q Consensus       172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~  246 (356)
                          ++.+....|++++++++++||.|.+++||..++.++  ......+....+.+.........+++..   .+...+.
T Consensus       136 ----~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (299)
T PRK11453        136 ----NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDM  211 (299)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCH
Confidence                112223579999999999999999999998765431  2344455555555544444443333211   1112233


Q ss_pred             hhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          247 IGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       247 ~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      ..|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+.++
T Consensus       212 ~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        212 TTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            4688999999999999999999999999999999999999999999999999999999999999999999998876554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=4.4e-33  Score=258.05  Aligned_cols=284  Identities=14%  Similarity=0.129  Sum_probs=214.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS   88 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   88 (356)
                      +.+++++++++.++||.+++..|...+ +++|..+.++|+.++.+++.++.   ++++.++   +++ +..+.+.++ ..
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---~~~-~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---FPK-RYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc---ccccccc---ccH-HHHHHHhHHHHH
Confidence            346788899999999999999999998 89999999999999998887642   2211111   222 233444445 77


Q ss_pred             HHHHHHHHhhc----cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400           89 SQIFSFVGIQY----SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL  164 (356)
Q Consensus        89 ~~~~~~~al~~----~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~  164 (356)
                      ++.+++.++++    .++++++++.+++|+++.+++++++|||++++      +++|++++++|++++.. .+.... . 
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~-~-  144 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLS-L-  144 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccch-h-
Confidence            88888888765    57788899999999999999999999999999      99999999999999863 111000 0 


Q ss_pred             CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 018400          165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLG  244 (356)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  244 (356)
                            .+ ..++......|++++++++++||.|+++.||..++.+ +.+...   ..+.+.+.+.....+ +. ... .
T Consensus       145 ------~~-~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~-~~-~~~-~  210 (295)
T PRK11689        145 ------AE-LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSP-QP-AMV-F  210 (295)
T ss_pred             ------hh-hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhc-Cc-ccc-C
Confidence                  00 0001122356999999999999999999999977764 665432   223333333333222 11 111 1


Q ss_pred             chhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          245 LDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       245 ~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      +...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus       211 ~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        211 SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            2235777777785 899999999999999999999999999999999999999999999999999999999998876544


Q ss_pred             c
Q 018400          325 S  325 (356)
Q Consensus       325 ~  325 (356)
                      +
T Consensus       290 ~  290 (295)
T PRK11689        290 R  290 (295)
T ss_pred             h
Confidence            3

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.6e-32  Score=252.72  Aligned_cols=283  Identities=11%  Similarity=0.071  Sum_probs=227.0

Q ss_pred             hhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHH
Q 018400            6 GSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVF   85 (356)
Q Consensus         6 ~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   85 (356)
                      +..++.+++..++++.++|+.++.+.|++.+ +++|..+.++|+.+++++++++... ++   ++.++++++..+..|++
T Consensus         6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~-~~---~~~~~~~~~~~~~~g~~   80 (293)
T PRK10532          6 RKLPVWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP-WR---LRFAKEQRLPLLFYGVS   80 (293)
T ss_pred             cccccchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH-Hh---ccCCHHHHHHHHHHHHH
Confidence            4445678999999999999999999999998 7999999999999999888765321 11   23356788888888887


Q ss_pred             HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400           86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS  165 (356)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~  165 (356)
                      .+..+.+++++++|++++.++++.++.|+++.+++    +||+.        +..++.++++|+.++.. .+.       
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~-------  140 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQ-------  140 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCC-------
Confidence            78888999999999999999999999999998876    35554        34567788999988752 111       


Q ss_pred             CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400          166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL  245 (356)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  245 (356)
                                +.......|+++.++++++||.|.+..||..++.+ +.... +...++++++.+.....+. ...+   +
T Consensus       141 ----------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~---~  204 (293)
T PRK10532        141 ----------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALW---H  204 (293)
T ss_pred             ----------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccC---C
Confidence                      11122357999999999999999999999987775 76664 5566666666666653321 1111   2


Q ss_pred             hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      ...|..+++.|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|.+...+.++
T Consensus       205 ~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        205 WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            23466678999999999999999999999999999999999999999999999999999999999999999999876655


Q ss_pred             cccc
Q 018400          326 KEEK  329 (356)
Q Consensus       326 ~~~~  329 (356)
                      |+.|
T Consensus       285 ~~~~  288 (293)
T PRK10532        285 REPK  288 (293)
T ss_pred             CCCC
Confidence            4333

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=2.3e-32  Score=253.41  Aligned_cols=280  Identities=13%  Similarity=0.048  Sum_probs=210.4

Q ss_pred             hhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC--C-CCcHHHHHHHHH
Q 018400            5 MGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER--P-QLTFSILCSFFL   81 (356)
Q Consensus         5 ~~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~~   81 (356)
                      |+|+++.+|++++++++++||.+++..|.. + +++|..+.++|...+.+++.++...++++..  + ..+++++.... 
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA-   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH-
Confidence            456677889999999999999999999986 4 7999999999999999887776554432111  0 11334433333 


Q ss_pred             HHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCC
Q 018400           82 LSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL  160 (356)
Q Consensus        82 ~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~  160 (356)
                      .+.++ +.++.++++|++++++++++++.++.|+++.+++++++|||++++      +++|++++++|++++..   +. 
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~---~~-  147 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW---TF-  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH---Hc-
Confidence            55555 889999999999999999999999999999999999999999999      99999999999999852   10 


Q ss_pred             ccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 018400          161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPS  239 (356)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  239 (356)
                                     + + .    .++.++++++||.|.+..|+..++.. +....+.+...++.....+..   ..+..
T Consensus       148 ---------------~-~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  203 (296)
T PRK15430        148 ---------------G-S-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS  203 (296)
T ss_pred             ---------------C-C-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc
Confidence                           0 1 1    14688899999999999998743321 123334444444443322111   11111


Q ss_pred             cccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhh
Q 018400          240 DWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYA  319 (356)
Q Consensus       240 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l  319 (356)
                      .+...+...+..+.+.|+ .+.++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|++|+.+
T Consensus       204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            111111112333444555 7889999999999999999999999999999999999999999999999999999888777


Q ss_pred             hee
Q 018400          320 VMW  322 (356)
Q Consensus       320 ~~~  322 (356)
                      ...
T Consensus       283 ~~~  285 (296)
T PRK15430        283 FVM  285 (296)
T ss_pred             HHH
Confidence            653

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=4.4e-31  Score=240.31  Aligned_cols=257  Identities=18%  Similarity=0.214  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccCh
Q 018400           24 QVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSP  102 (356)
Q Consensus        24 ~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~  102 (356)
                      ||.+++..|..++++.|+....+.|...+.+++.++...+       .+++++.+....|.++ +.++.+++.|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999987678899999999988888777653221       2346677788888888 9999999999999999


Q ss_pred             hhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchH
Q 018400          103 TLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWI  182 (356)
Q Consensus       103 ~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (356)
                      ++++++.++.|+++.+++++++|||++++      ++.|+.++++|+.++.. .+                   +.+...
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-------------------~~~~~~  127 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-------------------NLSINP  127 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------cccccH
Confidence            99999999999999999999999999999      99999999999999852 11                   122446


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400          183 LGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG  261 (356)
Q Consensus       183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  261 (356)
                      .|++++++++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. .+   +...|..+++.+++++.
T Consensus       128 ~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~  203 (260)
T TIGR00950       128 AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTA  203 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHH
Confidence            7999999999999999999999987764 2334555678888888887776543221 11   33467788899999999


Q ss_pred             HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhh
Q 018400          262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGF  317 (356)
Q Consensus       262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~  317 (356)
                      ++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+
T Consensus       204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999886

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.98  E-value=2.6e-30  Score=240.45  Aligned_cols=279  Identities=16%  Similarity=0.140  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018400           19 IVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQ   98 (356)
Q Consensus        19 l~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~   98 (356)
                      +...+-....+..|+++++...|..+.+.|+..+.+...+. +..+.+++++.+++++++.+..|++.+.++.+.+.|++
T Consensus         9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~   87 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLS   87 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344444556889999833668888889988887766554 21222334557889999999999999888999999999


Q ss_pred             ccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCC
Q 018400           99 YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQ  178 (356)
Q Consensus        99 ~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (356)
                      |++++.++++.+++|+++.+++++++|||++++      ++.|++++++|+++..  .+                   +.
T Consensus        88 ~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~-------------------~~  140 (302)
T TIGR00817        88 KVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DT-------------------EL  140 (302)
T ss_pred             hccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CC-------------------cc
Confidence            999999999999999999999999999999999      9999999999998753  11                   12


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHH--hhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCc---ccc-----cchhh
Q 018400          179 LSWILGGFFLAAEAFMNSAWFILQALILR--KFAAVLIIMFYLFFFNTILSTAFALIVVSEPSD---WKL-----GLDIG  248 (356)
Q Consensus       179 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~-----~~~~~  248 (356)
                      +....|++++++++++||+|.++.||..+  +.+ +.+.+.++...+.+.+.|.....++....   +..     .....
T Consensus       141 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (302)
T TIGR00817       141 SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKI  219 (302)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHH
Confidence            23357999999999999999999999887  674 99999999999999999988755432110   100     00001


Q ss_pred             HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400          249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK  326 (356)
Q Consensus       249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  326 (356)
                      +...+..+..+....+.++++++++.++++++++.+++|+++++++++++||+++..+++|.+++++|++++.+.|++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            111222232223333345568999999999999999999999999999999999999999999999999999765443

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.7e-27  Score=219.25  Aligned_cols=273  Identities=13%  Similarity=0.067  Sum_probs=201.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFH-RSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        14 ~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      .+..++++++|+...+..|...+ +-++  +.+++.....+++.++...+. ++.++..+++.+......++.+..++.+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHAD-KEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG   79 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCC-chhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence            45678899999999999997765 3334  346777777777777655432 2223332334444444444445999999


Q ss_pred             HHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCc
Q 018400           93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR  172 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~  172 (356)
                      ++.|+++.+++.++.+.++.|+++.+++++++|||++++      +++|+.+++.|+.++.. . +.             
T Consensus        80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~-~~-------------  138 (281)
T TIGR03340        80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-S-RF-------------  138 (281)
T ss_pred             HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-c-cc-------------
Confidence            999999999999999999999999999999999999999      99999999999998852 1 11             


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHH----HHHHHHHHHHHHHHHHHHHHhcCCCcccccchhh
Q 018400          173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLI----IMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIG  248 (356)
Q Consensus       173 ~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  248 (356)
                           ......|+.++++++++|+.|.+..|+..++.+ +..    .+.+.....++...+.....+.  ..+. ..+..
T Consensus       139 -----~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~  209 (281)
T TIGR03340       139 -----AQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHG--RSMF-PYARQ  209 (281)
T ss_pred             -----cccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhc--cchh-hhHHH
Confidence                 112245788999999999999999987654443 322    2222222221221222111111  1111 12224


Q ss_pred             HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhh
Q 018400          249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYA  319 (356)
Q Consensus       249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l  319 (356)
                      +..+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            55667788889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.6e-26  Score=213.83  Aligned_cols=299  Identities=16%  Similarity=0.170  Sum_probs=231.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccC-CCCCCcHHHHHHHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGIN-KYVIIVYSDALSSLFFLFCSFLFHRS-ERPQLTFSILCSFFLLSVFGCS   88 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~   88 (356)
                      .+..+..=+.+++-..+...+....+.+.+ |....++-+..-.++..+...+++++ ++.+.-+++|+++++++++-..
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~   91 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVE   91 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHH
Confidence            344444445556666777777776654444 66667777766666666655444432 2233345778888889999999


Q ss_pred             HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400           89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG  168 (356)
Q Consensus        89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~  168 (356)
                      .+.+.+.|++|++.+.++++..++-+++++++++++|||.++.      +++|+++++.|+.++...+...         
T Consensus        92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~---------  156 (334)
T PF06027_consen   92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS---------  156 (334)
T ss_pred             HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc---------
Confidence            9999999999999999999999999999999999999999999      9999999999999987422111         


Q ss_pred             CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC-Ccccccchh
Q 018400          169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDI  247 (356)
Q Consensus       169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~  247 (356)
                         ..++++.++..+||+++++|+++||+++++.++..++.+ ..++..+..+++.++..+...+.+... ...+..+. 
T Consensus       157 ---~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~-  231 (334)
T PF06027_consen  157 ---GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQ-  231 (334)
T ss_pred             ---cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChh-
Confidence               001134456789999999999999999999999999986 889999999999999888877665532 11221111 


Q ss_pred             hHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccc
Q 018400          248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKE  327 (356)
Q Consensus       248 ~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~  327 (356)
                      .+..++..+ ++...-|.+....++..+|+..+.-..+..+++++++++++|+++++..++|.++|+.|+.++...++++
T Consensus       232 ~~~~~v~~~-~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  232 VIGLLVGYA-LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             hHHHHHHHH-HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            233333333 3667778888899999999999999999999999999999999999999999999999999998766554


Q ss_pred             ccc
Q 018400          328 EKT  330 (356)
Q Consensus       328 ~~~  330 (356)
                      +++
T Consensus       311 ~~~  313 (334)
T PF06027_consen  311 EEA  313 (334)
T ss_pred             ccc
Confidence            443

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=4.8e-27  Score=222.18  Aligned_cols=284  Identities=14%  Similarity=0.135  Sum_probs=224.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCc--HHHHHHHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGIN-KYVIIVYSDALSSLFFLFCSFLFHRSERPQLT--FSILCSFFLLSVFG   86 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~   86 (356)
                      +.+..++.+....+-.......|.+++ ++| |..+..+|++.+.++....+ ..+.+++|+++  +++++..+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            344455555566666777788899998 799 99999999999987655443 22222234442  45788899999999


Q ss_pred             HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCC
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSH  166 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~  166 (356)
                      ...+...+.|+++++++.++++..+.|+++++++++++|||++++      ++++++++++|+++...  +         
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~---------  187 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K---------  187 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c---------
Confidence            555777889999999999999999999999999999999999999      99999999999999862  1         


Q ss_pred             CCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------hhHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018400          167 SGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA------AVLIIMFYLFFFNTILSTAFALIVVSEP--  238 (356)
Q Consensus       167 ~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~--  238 (356)
                                +.+....|++++++|++++|.|+++.||..++.+      ++.....+....+.++++|+....+...  
T Consensus       188 ----------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~  257 (350)
T PTZ00343        188 ----------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV  257 (350)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence                      1223467999999999999999999999876531      2666777778899999999887554321  


Q ss_pred             Cccc----ccchhhHHHHHHHHHHhhHHHHhHHHh----hhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhH
Q 018400          239 SDWK----LGLDIGLVAVLYSAVIGTGFRVGLCTW----CLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGA  310 (356)
Q Consensus       239 ~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~----al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~  310 (356)
                      ..+.    ......+..+++ .++.+++++++|+.    +++++++.+.+....++|+++++++++++||+++..+++|+
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~  336 (350)
T PTZ00343        258 PVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGM  336 (350)
T ss_pred             HHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHH
Confidence            1110    001112233444 35578999999995    99999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhheec
Q 018400          311 MIIVAGFYAVMWG  323 (356)
Q Consensus       311 ~li~~g~~l~~~~  323 (356)
                      +++++|+++++..
T Consensus       337 ~lii~Gv~lYs~~  349 (350)
T PTZ00343        337 AVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999998754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.4e-26  Score=210.39  Aligned_cols=248  Identities=9%  Similarity=-0.007  Sum_probs=184.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCcHHH-HHHHHHHHHH
Q 018400           12 LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE-----RPQLTFSI-LCSFFLLSVF   85 (356)
Q Consensus        12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~   85 (356)
                      +|++++++++++||.++++.|. .+ +++|..++++|.+++.+++.++..+++++.     .++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 45 699999999999999888776654433211     11112232 4456667777


Q ss_pred             HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400           86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS  165 (356)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~  165 (356)
                      .+.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++++++++++|++++..  +.       
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~--~~-------  144 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV--LK-------  144 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH--Hc-------
Confidence            7999999999999999999999999999999999999999999999      99999999999998752  10       


Q ss_pred             CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400          166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL  245 (356)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  245 (356)
                                + + .    ..++++++++||.|.+..|+..++ + ....... .........+... ...........+
T Consensus       145 ----------~-~-~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~  204 (256)
T TIGR00688       145 ----------G-S-L----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLL-QTDFATVQQTNP  204 (256)
T ss_pred             ----------C-C-c----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHH-HhccCcccccCc
Confidence                      0 1 1    135788999999999999987543 2 3222211 1111112111111 111111111112


Q ss_pred             hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHH
Q 018400          246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVI  297 (356)
Q Consensus       246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~  297 (356)
                      ...|..+++.|+. +.++|.+|++++|+.|+++++++.+++|+++.++++++
T Consensus       205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            2368888888875 88999999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=3.1e-24  Score=197.63  Aligned_cols=282  Identities=18%  Similarity=0.278  Sum_probs=215.8

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-H
Q 018400            9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-C   87 (356)
Q Consensus         9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   87 (356)
                      +........++.++.|+......|...++..++....+.|...+.++..+.....+ ...++ ..+++....+.+.++ .
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~   81 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP-RGLRP-ALRPWLLLLLLALLGLA   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-ccccc-cccchHHHHHHHHHHHH
Confidence            34567788888889999999999999883266767777799988877444322111 11111 112244455555555 9


Q ss_pred             HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHH-HHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCC
Q 018400           88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI-IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSH  166 (356)
Q Consensus        88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~-~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~  166 (356)
                      .++.+++.++++++++.++.+.++.|+++.++++ +++|||++++      ++.++.++++|++++...+..        
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~--------  147 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGG--------  147 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCc--------
Confidence            9999999999999999999999999999999997 7779999999      999999999999999631111        


Q ss_pred             CCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHH-HHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400          167 SGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMF-YLFFFNTILSTAFALIVVSEPSDWKLGL  245 (356)
Q Consensus       167 ~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~  245 (356)
                               +... ...|+.+.+++++++|.+.+..|+.. +.+ +..... +...  ............. ..  ....
T Consensus       148 ---------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-~~--~~~~  210 (292)
T COG0697         148 ---------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALLLLLLFFLSG-FG--APIL  210 (292)
T ss_pred             ---------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHHHHHHHHhcc-cc--ccCC
Confidence                     0111 57899999999999999999999887 553 555555 3333  2222222221211 11  1222


Q ss_pred             hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      ...+..+.+.|++++++++.+|++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus       211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            346888889999899899999999999999999999999999999999999999999999999999999999998655

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.91  E-value=1.8e-22  Score=173.90  Aligned_cols=274  Identities=12%  Similarity=0.054  Sum_probs=226.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      +++.++.+++.--....+.|...+ ...+..++.+|..+++++++++.  +  +.++++++++++.....|...+..|++
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~--R--Pwr~r~~~~~~~~~~~yGvsLg~MNl~   87 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALF--R--PWRRRLSKPQRLALLAYGVSLGGMNLL   87 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHh--h--HHHhccChhhhHHHHHHHHHHHHHHHH
Confidence            688888888888888889999998 79999999999999999888742  2  234567889999999999999999999


Q ss_pred             HHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCc
Q 018400           93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR  172 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~  172 (356)
                      +|.+++..|.+.+..+.++-|+.+.+++.   | |.  +      ..+.+.+++.|+.++.- .++              
T Consensus        88 FY~si~riPlGiAVAiEF~GPL~vA~~~s---R-r~--~------d~vwvaLAvlGi~lL~p-~~~--------------  140 (292)
T COG5006          88 FYLSIERIPLGIAVAIEFTGPLAVALLSS---R-RL--R------DFVWVALAVLGIWLLLP-LGQ--------------  140 (292)
T ss_pred             HHHHHHhccchhhhhhhhccHHHHHHHhc---c-ch--h------hHHHHHHHHHHHHhhee-ccC--------------
Confidence            99999999999999999999988766532   2 22  2      57788889999998862 222              


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHH
Q 018400          173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAV  252 (356)
Q Consensus       173 ~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l  252 (356)
                         +....++.|..+++.++.||+.|.+..+|..+..+ ...-+...+.++.++..|+..-..+    ....++.-...-
T Consensus       141 ---~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag----~~l~~p~ll~la  212 (292)
T COG5006         141 ---SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG----PALFSPSLLPLA  212 (292)
T ss_pred             ---CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc----hhhcChHHHHHH
Confidence               23456788999999999999999999999987775 7778888899999999999873322    111122234455


Q ss_pred             HHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400          253 LYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK  326 (356)
Q Consensus       253 ~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  326 (356)
                      +..++.++.+.|.+-..++++.|..+.+.+..+||.++.+.+++++||.+|+.||.|...|+++..-..+..+|
T Consensus       213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            67888999999999999999999999999999999999999999999999999999999999988766654443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=1.6e-22  Score=178.71  Aligned_cols=281  Identities=12%  Similarity=0.040  Sum_probs=222.8

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC-C--CCcHHHHHHHHHHHHH
Q 018400            9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-P--QLTFSILCSFFLLSVF   85 (356)
Q Consensus         9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~   85 (356)
                      ...+|++..+.+.++||..+...|...  ..++.++...|...+.+++..+....+++.. .  ..++|.+..+.+.+..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            456899999999999999999999984  5899999999999999888776655544221 1  1244667777777777


Q ss_pred             HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400           86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS  165 (356)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~  165 (356)
                      -..+...|.+|.++..+-++++-++..|++.++++++++|||+++.      |+++++++.+|+...+...|.       
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~-------  148 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS-------  148 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-------
Confidence            7999999999999999999999999999999999999999999999      999999999999998752221       


Q ss_pred             CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400          166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL  245 (356)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  245 (356)
                                    -.    ...+.=+++|+.|-.+.|+.  +.+ +.+-...-+..-....+...+..+...+.....+
T Consensus       149 --------------lp----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~  207 (293)
T COG2962         149 --------------LP----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNA  207 (293)
T ss_pred             --------------Cc----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCC
Confidence                          11    24456678999999877764  443 5555554444444444444443333221111123


Q ss_pred             hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      ...+..+...|. .|.+...++..+.++.|-+..+.+.|.+|..-.+++++++||+++..+++..++|..|+.++.+..-
T Consensus       208 ~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         208 NSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             chHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            346777788887 7889999999999999999999999999999999999999999999999999999999999886544


Q ss_pred             c
Q 018400          326 K  326 (356)
Q Consensus       326 ~  326 (356)
                      +
T Consensus       287 ~  287 (293)
T COG2962         287 Y  287 (293)
T ss_pred             H
Confidence            3

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=2.7e-21  Score=178.44  Aligned_cols=273  Identities=13%  Similarity=0.103  Sum_probs=207.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      ++++.++++++||.+.+..|...  +.++.++.  |..++.+++..+....+++.  +..++.+..-++.|++-..++.+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~   75 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQIN   75 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhh
Confidence            57888999999999999999874  67777664  77777776665544443211  11234555566666667899999


Q ss_pred             HHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccc----hhhHHHHhhhhhhheeccCCCCccCCCCC
Q 018400           93 SFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAK----SLGTFASIGGAFVVTFYKGPPLIGELSHS  167 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~----~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~  167 (356)
                      ++.+.++++.+.+..+.+ ++|++..+.+.+++|||.+++      +    .+|++++++|++++...+++..       
T Consensus        76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~-------  142 (290)
T TIGR00776        76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA-------  142 (290)
T ss_pred             HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc-------
Confidence            999999999999999988 899999999999999999999      9    9999999999998863211110       


Q ss_pred             CCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH----HHHHHHHHHHHHHhcCCCcccc
Q 018400          168 GSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFF----FNTILSTAFALIVVSEPSDWKL  243 (356)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~  243 (356)
                            .+++..+..+|.+++++++++|+.|.+..|+.  ++ |+....+.+..    .+.++..+.   .  ...++  
T Consensus       143 ------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~~--  206 (290)
T TIGR00776       143 ------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---I--LAKPL--  206 (290)
T ss_pred             ------ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---h--cccch--
Confidence                  00001334779999999999999999999976  45 48877555444    333333222   1  11112  


Q ss_pred             cchhhHHHHHHHHHHhhHHHHhHHHhhhc-cCCCceeeccchhHHHHHHHHHHHHhcCcccchhh----hhHHHHHHhhh
Q 018400          244 GLDIGLVAVLYSAVIGTGFRVGLCTWCLS-RTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL----IGAMIIVAGFY  318 (356)
Q Consensus       244 ~~~~~~~~l~~~g~~~~~~~~~~~~~al~-~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~----iG~~li~~g~~  318 (356)
                      ..+..+..++ .|++ .++++.+|..+.+ +.++++++.+...+|+.+.++++++++|+.+..++    +|+++++.|+.
T Consensus       207 ~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence            1222343444 8886 7999999999999 99999999999999999999999999999999999    99999999998


Q ss_pred             hhee
Q 018400          319 AVMW  322 (356)
Q Consensus       319 l~~~  322 (356)
                      +...
T Consensus       285 l~~~  288 (290)
T TIGR00776       285 ILGI  288 (290)
T ss_pred             HHhc
Confidence            8654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.89  E-value=1.7e-24  Score=187.39  Aligned_cols=291  Identities=15%  Similarity=0.143  Sum_probs=222.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC-CCCcHHHHHHHHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQLTFSILCSFFLLSVFGCSS   89 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~   89 (356)
                      .+|.++..+. ..+..+.++++...  +.+|....-.|.+.-.+...++..+++..-+ |+   .....++++|+.|..+
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~---g~R~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE---GKRKWLILRGFMGFTG  110 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC---CcEEEEEeehhhhhhH
Confidence            4566666666 66666777777665  4699999999977666666665444443221 22   3344567889999888


Q ss_pred             HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCC
Q 018400           90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGS  169 (356)
Q Consensus        90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~  169 (356)
                      ..+.|+|++|++.++|+++..++|+||.+++|.++|||.++.      +.++..+.+.|+++++  +++.+++..+++. 
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~-  181 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGE-  181 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccc-
Confidence            899999999999999999999999999999999999999999      9999999999999997  6666554421111 


Q ss_pred             CCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhH
Q 018400          170 PRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGL  249 (356)
Q Consensus       170 ~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  249 (356)
                          +++..+...+|.+.++.++++.|--.++.|+..++.+ ......|...++++...+.....+.  -.++. ...+|
T Consensus       182 ----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~--~~lP~-cgkdr  253 (346)
T KOG4510|consen  182 ----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGA--VQLPH-CGKDR  253 (346)
T ss_pred             ----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccc--eecCc-cccce
Confidence                1111244566788889999998888888999888886 5555566666777766665543321  12221 22367


Q ss_pred             HHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          250 VAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       250 ~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      +.+..+|+ .+.+++.+.+.++++-.+..++++.+.+.++|.++++++|+|.||.+.|.|+++++.+.......|.
T Consensus       254 ~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  254 WLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             EEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            77788888 6778999999999999999999999999999999999999999999999999999988777654443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=5.1e-18  Score=157.86  Aligned_cols=280  Identities=16%  Similarity=0.194  Sum_probs=215.8

Q ss_pred             HHHHHHHHHhC-CCC--hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChh
Q 018400           27 NMEVIKAAMSK-GIN--KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPT  103 (356)
Q Consensus        27 ~~~~~k~~~~~-~~~--~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~  103 (356)
                      ...+.+..... +..  |..+.+..++...++..+.....+   +++.++..++.++..+++...+..+.+.|++|.+.+
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p   91 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYP   91 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence            44555555542 334  778888888887776665444333   122234567788888888899999999999999999


Q ss_pred             hHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHH
Q 018400          104 LSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWIL  183 (356)
Q Consensus       104 ~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (356)
                      .-.++.++.|+++++++.+++|+|.+++      +++++++..+|+++....+...-           +..++....+..
T Consensus        92 ~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~-----------~~~~~~~~~~~~  154 (303)
T PF08449_consen   92 TQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSS-----------SSSNSSSFSSAL  154 (303)
T ss_pred             HHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeecccccc-----------cccccccccchh
Confidence            9999999999999999999999999999      99999999999999875322210           011112222344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHH--hcCCCccc--ccchhhHHHHHHHHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIV--VSEPSDWK--LGLDIGLVAVLYSAVI  258 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~--~~~~~~~~~l~~~g~~  258 (356)
                      |+++.+++.++.|...++++|..++++ ++.+.+++...++.+...+.....  ++....++  ...+..+..++...+ 
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-
Confidence            999999999999999999999988764 588999999999999888887752  22111111  111223444555554 


Q ss_pred             hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccc
Q 018400          259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKE  327 (356)
Q Consensus       259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~  327 (356)
                      ++.++....++..++.++...++...+.-+++++++++++|+++++.+|+|.++++.|..++.+.|+|+
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            667778888889999999999999999999999999999999999999999999999999998877665

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=1.2e-18  Score=158.19  Aligned_cols=225  Identities=22%  Similarity=0.273  Sum_probs=184.2

Q ss_pred             HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400           82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI  161 (356)
Q Consensus        82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~  161 (356)
                      ...+.+..++.+..|+.+++++..+++.+++-+||.+++.++-.||+++.      |.+++++++.|+++++..+.++  
T Consensus       165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~--  236 (416)
T KOG2765|consen  165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ--  236 (416)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc--
Confidence            33444999999999999999999999999999999999999999999999      9999999999999998532221  


Q ss_pred             cCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 018400          162 GELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA---AVLIIMFYLFFFNTILSTAFALIVVS-E  237 (356)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-~  237 (356)
                                 .++........|+++++++++.||+|.++.||...++.   |-.....+..++..+++.|..++... .
T Consensus       237 -----------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~  305 (416)
T KOG2765|consen  237 -----------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG  305 (416)
T ss_pred             -----------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence                       11233445678999999999999999999998876652   23344445566666666655543321 2


Q ss_pred             CCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhh
Q 018400          238 PSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGF  317 (356)
Q Consensus       238 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~  317 (356)
                      ....+.++......++..++++++++-++|.+|.--.++..+..-+.++.+.+.+.+.++-|.++++.+++|...|++|.
T Consensus       306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F  385 (416)
T KOG2765|consen  306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF  385 (416)
T ss_pred             cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            23345555556667778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheeccc
Q 018400          318 YAVMWGKS  325 (356)
Q Consensus       318 ~l~~~~~~  325 (356)
                      ..++..+.
T Consensus       386 v~vn~~~~  393 (416)
T KOG2765|consen  386 VIVNISSE  393 (416)
T ss_pred             hheecccc
Confidence            99887654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.75  E-value=8.6e-18  Score=153.93  Aligned_cols=289  Identities=16%  Similarity=0.141  Sum_probs=221.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--CCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 018400           14 SVGMVIVLLAQVSNMEVIKAAMS--KGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQI   91 (356)
Q Consensus        14 ~~~~ll~~~~~g~~~~~~k~~~~--~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   91 (356)
                      +++.....++-.......|+.++  ..--|..+.......+.+.......+...+..+..++..++..+.+|++.+++..
T Consensus        19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v   98 (316)
T KOG1441|consen   19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHV   98 (316)
T ss_pred             HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHH
Confidence            33344444444445556688887  3344777777766666665555444433322222244678889999999999999


Q ss_pred             HHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400           92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR  171 (356)
Q Consensus        92 ~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~  171 (356)
                      +-..++++.+++....+..++|+++.++++++.+|+.++.      .++.+...+.|+.+.+.                 
T Consensus        99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~-----------------  155 (316)
T KOG1441|consen   99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV-----------------  155 (316)
T ss_pred             hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee-----------------
Confidence            9999999999999999999999999999999999999999      89999999999998864                 


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH--hhc-hhHHHHHHHHHHHHHHHH-HHHHHHhcCCCc-ccc-cc
Q 018400          172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILR--KFA-AVLIIMFYLFFFNTILST-AFALIVVSEPSD-WKL-GL  245 (356)
Q Consensus       172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~-~~~-~~  245 (356)
                          .+.+.+..|.+.+.++.+.+++.+++.|+..+  +++ |+++...++.-.+.+.++ |.....+++... +.. .+
T Consensus       156 ----~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~  231 (316)
T KOG1441|consen  156 ----TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPW  231 (316)
T ss_pred             ----ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecccc
Confidence                23446688999999999999999999999984  322 699999999999999999 777655554330 010 11


Q ss_pred             hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      +.......+..+ +...-...-+..+.+++|.+.++.+.+.-++.++.++++|+++.++.+..|+++-++|++++.+.|.
T Consensus       232 ~~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  232 FVTFLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             chhhHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            122333333332 4444445566889999999999999999999999999999999999999999999999999998777


Q ss_pred             ccccc
Q 018400          326 KEEKT  330 (356)
Q Consensus       326 ~~~~~  330 (356)
                      ++++.
T Consensus       311 ~~~~~  315 (316)
T KOG1441|consen  311 KEKKG  315 (316)
T ss_pred             hhhcc
Confidence            65543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=1.3e-17  Score=144.01  Aligned_cols=252  Identities=14%  Similarity=0.098  Sum_probs=199.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHH
Q 018400           40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVL  119 (356)
Q Consensus        40 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~ll  119 (356)
                      .|..-.+..+.+-+++..++..++++  .   -...|++++++++...-.|++...|.||++...+.++-.-....+.++
T Consensus        47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~--~---~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~l  121 (336)
T KOG2766|consen   47 APTSQTFLNYVLLALVYGPIMLFRRK--Y---IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVL  121 (336)
T ss_pred             CccHHHHHHHHHHHHHHhhHHHhhhH--H---HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHH
Confidence            47778888898888888888776652  1   224577789999888888888999999999999999988888888899


Q ss_pred             HHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHH
Q 018400          120 AIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF  199 (356)
Q Consensus       120 s~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~  199 (356)
                      +|+++|.|..+.      |+.|+.+|+.|++++++.+-.             +.+-.++.+-.+|+.+.++++-+||..+
T Consensus       122 sw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~-------------agd~aggsnp~~GD~lvi~GATlYaVSN  182 (336)
T KOG2766|consen  122 SWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVH-------------AGDRAGGSNPVKGDFLVIAGATLYAVSN  182 (336)
T ss_pred             HHHHHHHHHhhh------eeeeEEeEecceEEEEEeeec-------------cccccCCCCCccCcEEEEecceeeeecc
Confidence            999999999999      999999999999999852211             1112334566789999999999999999


Q ss_pred             HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCcee
Q 018400          200 ILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYV  279 (356)
Q Consensus       200 v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~  279 (356)
                      +..+.+.++.+ ..+.+....++|+++..+-.. .+... .....++......+. ..++..+-|.+.-..+|..+++..
T Consensus       183 v~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~-~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~  258 (336)
T KOG2766|consen  183 VSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHH-VSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMF  258 (336)
T ss_pred             ccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccc-eeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEE
Confidence            99999999985 999999999999999887743 43321 111111112222222 333566667777788999999999


Q ss_pred             eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          280 SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       280 s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      +.-..+.-.+++++  -.||-+.++...+..+.+..|.+++.
T Consensus       259 nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  259 NLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             EhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            99999999999998  56788899999999999999999884

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.64  E-value=2.2e-15  Score=116.94  Aligned_cols=134  Identities=13%  Similarity=0.151  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCC-CCcHHHHHHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERP-QLTFSILCSFFLLSVFGCSSQI   91 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~   91 (356)
                      ..++.+++++++|...++.|...+ ++||..-.+.|.....+++..+....++...+ .+++|.|....+.|+.++.+..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            567899999999999999999998 89999999999999888888877666653322 2577899999999988899999


Q ss_pred             HHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        92 ~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      +||.|++...++.+..+..++|+++.+++++++|||+|.+      +++|+.+.++|++++.
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999      9999999999999875

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.62  E-value=1.1e-14  Score=112.98  Aligned_cols=136  Identities=14%  Similarity=0.108  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR  263 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  263 (356)
                      ..++++++++++++..++.|--.++. ||..-++.+.++..+++..+...... .......+...|..+...|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence            46889999999999999999999988 59999999999988888777764433 22222224557888888896 89999


Q ss_pred             HhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          264 VGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       264 ~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      ..+|+++++..+++.+.++.-+.|+++++++++++||+++..+++|+++|++|.++...
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999988653

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.61  E-value=3.1e-13  Score=121.63  Aligned_cols=299  Identities=15%  Similarity=0.126  Sum_probs=227.3

Q ss_pred             chhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH--HHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHH
Q 018400            4 DMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIV--YSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFL   81 (356)
Q Consensus         4 ~~~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (356)
                      +..+.+..+++...+.-++.-..+-+..|.++..+--|..+..  ++.+.+.+.+...-. .+--..++++++..++++.
T Consensus         4 ~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~l~~~~~kk~~P   82 (314)
T KOG1444|consen    4 DEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRPLDLRTAKKWFP   82 (314)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCCcChHHHHHHcc
Confidence            3345555666777776667677777888999874322444444  777777666655322 2212346788999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400           82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI  161 (356)
Q Consensus        82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~  161 (356)
                      ..++-....+.-..+++|.++...+++-+.+|+++++....++|.|+++.      .+.++....+|......       
T Consensus        83 ~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~-------  149 (314)
T KOG1444|consen   83 VSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF-------  149 (314)
T ss_pred             HHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc-------
Confidence            99988888888889999999999999999999999999999999999999      89999988888877652       


Q ss_pred             cCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018400          162 GELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP--  238 (356)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~--  238 (356)
                                    .+......|..+++...++-+.+.+..|+..+..+ +....++|..+.+...+.+..+++++-.  
T Consensus       150 --------------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l  215 (314)
T KOG1444|consen  150 --------------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL  215 (314)
T ss_pred             --------------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence                          22233345899999999999999999998765432 4667888999999999888887665411  


Q ss_pred             --CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHh
Q 018400          239 --SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAG  316 (356)
Q Consensus       239 --~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g  316 (356)
                        ..........+..+...++.+.++.|.. .++.+..++++.++++...-..+.+-..+++|++.++.-.+|..+-+.|
T Consensus       216 ~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g  294 (314)
T KOG1444|consen  216 SLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG  294 (314)
T ss_pred             HhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence              0101112234677778888666665555 4899999999999999888888888888888889999999999999999


Q ss_pred             hhhheeccccccccc
Q 018400          317 FYAVMWGKSKEEKTT  331 (356)
Q Consensus       317 ~~l~~~~~~~~~~~~  331 (356)
                      -.++.+.+.++++.+
T Consensus       295 gv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  295 GVLYSYATFRKKKQP  309 (314)
T ss_pred             hhHHhhhhhhhccCC
Confidence            999988776555544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.60  E-value=2.7e-12  Score=117.19  Aligned_cols=295  Identities=13%  Similarity=0.137  Sum_probs=210.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHHHHHHhccC----CCCC------CcHHHHHH
Q 018400           12 LPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHRS----ERPQ------LTFSILCS   78 (356)
Q Consensus        12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~~------~~~~~~~~   78 (356)
                      .-++.++...+.++...+..|+....+   +.|-..++.--.+-.++...+.+...++    ..+.      .++++.++
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            567778888899999999999998755   5566666666666665555554444221    1111      24456777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCC
Q 018400           79 FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGP  158 (356)
Q Consensus        79 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~  158 (356)
                      ..+-+++..+.|.+.+.++.+.+++...+..++-.+-|++++.+++|+|.+++      ||.++++...|+.++-....+
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCCC
Confidence            77788888888889999999999999999999999999999999999999999      999999999999998411111


Q ss_pred             CCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018400          159 PLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSE  237 (356)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~  237 (356)
                      .          ....+....++.+.|....+.+++.-+...++.+|..++-+ +....+.-..++|.++.+...+....+
T Consensus       169 ~----------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~  238 (345)
T KOG2234|consen  169 P----------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGE  238 (345)
T ss_pred             C----------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            0          11111344567788999999999999999999999987643 244555555566666665555433222


Q ss_pred             CCccc----ccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 018400          238 PSDWK----LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII  313 (356)
Q Consensus       238 ~~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li  313 (356)
                      ...|.    ..+...|..++..++.     =.+-....|+.+-..=+....+..+++.+.++.++|-++|....+|..++
T Consensus       239 ~i~~~gff~G~s~~vw~vVl~~a~g-----GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lV  313 (345)
T KOG2234|consen  239 AINEYGFFYGYSSIVWLVVLLNAVG-----GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLV  313 (345)
T ss_pred             ccccCCccccccHHHHHHHHHHhcc-----chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence            21111    1122245555544442     22333345666655556666688999999999999999999999999999


Q ss_pred             HHhhhhheeccccc
Q 018400          314 VAGFYAVMWGKSKE  327 (356)
Q Consensus       314 ~~g~~l~~~~~~~~  327 (356)
                      +.++.++...++++
T Consensus       314 i~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  314 ILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHhhcCCccc
Confidence            99999998554443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.58  E-value=9.9e-14  Score=118.72  Aligned_cols=258  Identities=13%  Similarity=0.143  Sum_probs=193.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHH
Q 018400           42 YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI  121 (356)
Q Consensus        42 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~  121 (356)
                      ...+++....-.++.=.+..++++   .+.++..-+.+...+.-........+.|+||.+=....+-.+.-|+=+++++.
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir~~---~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV  130 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIRKK---TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV  130 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeeccc---ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence            344455555444443332222222   22333334455555555567777788999999988888999999999999999


Q ss_pred             HHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 018400          122 IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFIL  201 (356)
Q Consensus       122 ~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~  201 (356)
                      .+.|.+.+|+      +...+...++|+++..+ ++..             +++.++.....|.++.+++-..-++....
T Consensus       131 l~~~KsY~w~------kY~cVL~IV~GValFmY-K~~K-------------v~g~e~~t~g~GElLL~lSL~mDGlTg~~  190 (337)
T KOG1580|consen  131 LFAHKSYHWR------KYCCVLMIVVGVALFMY-KENK-------------VGGAEDKTFGFGELLLILSLAMDGLTGSI  190 (337)
T ss_pred             hhhcccccHH------HHHHHHHHHHHHHHhhc-cccc-------------cCCCcccccchHHHHHHHHHHhcccchhH
Confidence            9999999999      99999999999999874 4221             22344566788999999999888888888


Q ss_pred             HHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCC--cccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCce
Q 018400          202 QALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPS--DWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLY  278 (356)
Q Consensus       202 ~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~  278 (356)
                      +.+....+. ....++++..+.+.+.+..-.++.++-+.  .+....+..|+-+..+++ ++.+++.+.+.-+...+|.+
T Consensus       191 Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLt  269 (337)
T KOG1580|consen  191 QDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLT  269 (337)
T ss_pred             HHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCee
Confidence            887766543 36678888899888887666554433111  111112234666777787 89999999999999999999


Q ss_pred             eeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          279 VSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       279 ~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      -|++....-.|+++.++++++++++..||+|.++++.|+..-...
T Consensus       270 CSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  270 CSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD  314 (337)
T ss_pred             EEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence            999999999999999999999999999999999999998876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.54  E-value=2.8e-14  Score=114.53  Aligned_cols=124  Identities=17%  Similarity=0.322  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Q 018400           22 LAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYS  100 (356)
Q Consensus        22 ~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~  100 (356)
                      ++||...++.|...+ +.||....++|+..+.+ +.++..+.+++..++.+++++......|.++ ..++.+++.|+++.
T Consensus         1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            469999999999998 79999999999999998 6665555555444566778888889999987 99999999999999


Q ss_pred             ChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400          101 SPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus       101 ~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      +++.++.+.++.|+++.+++++++||+++++      ++.|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999      9999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.52  E-value=6.1e-12  Score=111.94  Aligned_cols=252  Identities=19%  Similarity=0.231  Sum_probs=186.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcc---CCCCCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHH
Q 018400           41 KYVIIVYSDALSSLFFLFCSFLFHR---SERPQLTFSILCS-FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFT  116 (356)
Q Consensus        41 ~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~  116 (356)
                      |..++.+..+.-.++........++   +.+.+.+|++..+ ....++.++....+..++++|++.+.-++..+.+++|.
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            6677766665554444433333332   2234567776554 45566777999999999999999999999999999999


Q ss_pred             HHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHH
Q 018400          117 FVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNS  196 (356)
Q Consensus       117 ~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a  196 (356)
                      .+++.++.-||++|.      -..-+.+..+|+++.++ ++                    ++....|..+..++.++-+
T Consensus       125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks--------------------Tqf~i~Gf~lv~~aS~~sG  177 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS--------------------TQFNIEGFFLVLAASLLSG  177 (349)
T ss_pred             HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc--------------------cceeehhHHHHHHHHHhhh
Confidence            999999999999999      77777777888888774 32                    3345678888888888888


Q ss_pred             HHHHHHHHHHHhhc----hhHHHHHHHHHHHHHHHHHHHHHHhcCCCc-----ccccch-hhHHHHHHHHHHhhHHHHhH
Q 018400          197 AWFILQALILRKFA----AVLIIMFYLFFFNTILSTAFALIVVSEPSD-----WKLGLD-IGLVAVLYSAVIGTGFRVGL  266 (356)
Q Consensus       197 ~~~v~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~g~~~~~~~~~~  266 (356)
                      +-..++++..++.+    +|....+...-...+.++|..+..|+....     +..... ..+..+..+++ +..+++.+
T Consensus       178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l  256 (349)
T KOG1443|consen  178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL  256 (349)
T ss_pred             hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence            87777777766642    578888888888888888888878774321     221111 12333333333 33344433


Q ss_pred             ---HHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400          267 ---CTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV  320 (356)
Q Consensus       267 ---~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~  320 (356)
                         -+..+.+++..+.++.+-..-+-+.+++..+.+|.++..-|+|..+...|+.++
T Consensus       257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence               345688999999999999999999999999999999999999999999999988

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.50  E-value=3e-12  Score=114.87  Aligned_cols=225  Identities=15%  Similarity=0.189  Sum_probs=165.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400           72 TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV  151 (356)
Q Consensus        72 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  151 (356)
                      ++|+..++.+.+++..+.+.+.+.++++++++.-.++.++-.++|++++++++|+|++++      ||.++.+.++|+.+
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence            457888889999999999999999999999999999999999999999999999999999      99999999999999


Q ss_pred             heeccCCCCccCCCCCCCCCcc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHH
Q 018400          152 VTFYKGPPLIGELSHSGSPRRL-LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTA  229 (356)
Q Consensus       152 v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~  229 (356)
                      +-. ++... .   +..+.+.. .+....+...|.+..++++++-++..++.+|..|+.+ +...........+.++.++
T Consensus        87 v~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~  161 (244)
T PF04142_consen   87 VQL-SSSQS-S---DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL  161 (244)
T ss_pred             eec-CCccc-c---ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence            853 11110 0   00000000 1112345678999999999999999999999988863 3556666667777777666


Q ss_pred             HHHHHhcCC----CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccch
Q 018400          230 FALIVVSEP----SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLG  305 (356)
Q Consensus       230 ~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~  305 (356)
                      .....+.+.    .-++.-+...|..++     .+.++=.+....+|+.+...=+.-..+..+.+.+.+++++|.+++..
T Consensus       162 ~~~~~~~~~~~~~g~f~G~~~~~~~~i~-----~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~  236 (244)
T PF04142_consen  162 ALLLSDGSAISESGFFHGYSWWVWIVIF-----LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS  236 (244)
T ss_pred             HHhcccccccccCCchhhcchHHHHHHH-----HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence            654332211    111111111232222     33333444556688888888888888999999999999999999999


Q ss_pred             hhhhHHH
Q 018400          306 SLIGAMI  312 (356)
Q Consensus       306 ~~iG~~l  312 (356)
                      ..+|+.+
T Consensus       237 f~lg~~~  243 (244)
T PF04142_consen  237 FLLGAAL  243 (244)
T ss_pred             Hhhheec
Confidence            9999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.46  E-value=1.8e-11  Score=109.08  Aligned_cols=264  Identities=14%  Similarity=0.153  Sum_probs=202.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHH
Q 018400           40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVL  119 (356)
Q Consensus        40 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~ll  119 (356)
                      ++...++...+.+.++-...  +..++.. .-.++.|.++...++...++..|-+.|++|.+=..-.+--++--+-+++.
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~--l~~~k~~-~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm  126 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAM--LKWWKKE-LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM  126 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHH--Hhccccc-CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence            46666677766666655433  2322222 22346788889899999999999999999999888888888877778899


Q ss_pred             HHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHH
Q 018400          120 AIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF  199 (356)
Q Consensus       120 s~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~  199 (356)
                      ..++.|.|.++.      +.+..++.-+|+.+...++..+-            ......++.+.|..++...-++-+..+
T Consensus       127 g~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDgfTn  188 (327)
T KOG1581|consen  127 GTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDGFTN  188 (327)
T ss_pred             HHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHhhHH
Confidence            999999999999      99999999999999876543321            112334577899999999999999999


Q ss_pred             HHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc--ccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCC
Q 018400          200 ILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-SD--WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTG  275 (356)
Q Consensus       200 v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~  275 (356)
                      ..+.++.++.. .+..++++..+++.+....... ..+.. ..  .-...+..+.-++.... +..+++.+-++-+++.+
T Consensus       189 ~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  189 ATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG  266 (327)
T ss_pred             hHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence            99998888643 4889999999999988766633 22211 11  11111223445555565 66788888889999999


Q ss_pred             CceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400          276 PLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK  326 (356)
Q Consensus       276 ~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  326 (356)
                      +.+.+.++.+.-++++.++.+.+|++++..||+|..+++.|+.+-...|+|
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999887665554

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=2.3e-13  Score=109.11  Aligned_cols=125  Identities=22%  Similarity=0.367  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhc
Q 018400          193 FMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLS  272 (356)
Q Consensus       193 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~  272 (356)
                      ++||.+.+..|+..++.+ +....++++..+.+ ..+...+.....  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            478999999999999985 99999999999998 666665554432  22333346777888888888999999999999


Q ss_pred             cCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          273 RTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       273 ~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      +.+++.++++.+++|+++.++++++++|+++..+++|+.+++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.29  E-value=1e-10  Score=106.20  Aligned_cols=133  Identities=12%  Similarity=0.115  Sum_probs=113.0

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400            9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINK--YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG   86 (356)
Q Consensus         9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   86 (356)
                      ...+|.++.++++++|+...+..|...+ +.++  .....+++..+.+++.+..+..++.  +..+.+++...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            3467999999999999999999999986 5664  4455577888888888876654432  233667777788888888


Q ss_pred             -HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhh
Q 018400           87 -CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAF  150 (356)
Q Consensus        87 -~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~  150 (356)
                       ...+.++++++++.+++.++.+.++.|+++.+++++++||+++..      ++.|..+.+.|+.
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence             899999999999999999999999999999999999999999999      9999999998863

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.22  E-value=3.8e-09  Score=94.76  Aligned_cols=237  Identities=16%  Similarity=0.133  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHhccCCCCCCc--HHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhcc
Q 018400           51 LSSLFFLFCSFLFHRSERPQLT--FSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEK  127 (356)
Q Consensus        51 ~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~  127 (356)
                      ++++++..+.++.++   |.++  .+.+...++.|++..+++...+.+.++.+++.+..+.. ++-+.+.+.+.++++|.
T Consensus        21 ~Gali~alv~~~~~~---p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW   97 (269)
T PF06800_consen   21 IGALIFALVVFLFRQ---PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW   97 (269)
T ss_pred             HHHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC
Confidence            344444444444443   4444  37888888899999999999999999999999999975 78888999999999998


Q ss_pred             ccccccccccch----hhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 018400          128 LNWENKSSQAKS----LGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQA  203 (356)
Q Consensus       128 ~~~~~~~~~~~~----~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~  203 (356)
                      -+..      ++    +++++.++|+.+.+. +++..            ...++..+...|....+++.+.|..|.+..|
T Consensus        98 ~~~~------~~~~G~~Al~liiiGv~lts~-~~~~~------------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~  158 (269)
T PF06800_consen   98 TTTT------QKIIGFLALVLIIIGVILTSY-QDKKS------------DKSSSKSNMKKGILALLISTIGYWIYSVIPK  158 (269)
T ss_pred             CCcc------hHHHHHHHHHHHHHHHHHhcc-ccccc------------cccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            8876      44    377788888888764 22210            0012245667899999999999999999876


Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccc
Q 018400          204 LILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFK  283 (356)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~  283 (356)
                      .  .+. |+....+-+.+--.+....+..+.+.  ...+   +..|.. +..|+ .-.++..+|..+.++.+.+..=.+.
T Consensus       159 ~--~~~-~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~~---k~~~~n-il~G~-~w~ignl~~~is~~~~G~a~af~lS  228 (269)
T PF06800_consen  159 A--FHV-SGWSAFLPQAIGMLIGAFIFNLFSKK--PFFE---KKSWKN-ILTGL-IWGIGNLFYLISAQKNGVATAFTLS  228 (269)
T ss_pred             h--cCC-ChhHhHHHHHHHHHHHHHHHhhcccc--cccc---cchHHh-hHHHH-HHHHHHHHHHHhHHhccchhhhhHH
Confidence            5  344 36666654433333333333332211  1111   112322 23444 4567788889999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCcccch----hhhhHHHHHHhhhh
Q 018400          284 PLAIVFSIVMDVVIVGDAFCLG----SLIGAMIIVAGFYA  319 (356)
Q Consensus       284 ~~~pv~a~~~~~~~~ge~~~~~----~~iG~~li~~g~~l  319 (356)
                      -+.++++.+.+.++++|+=+..    .++|+++++.|..+
T Consensus       229 Q~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  229 QLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999999987754    55788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.20  E-value=6.7e-11  Score=93.61  Aligned_cols=102  Identities=22%  Similarity=0.348  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHHhccCC--CCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHH
Q 018400           46 VYSDALSSLFFLFCSFLFHRSE--RPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII  122 (356)
Q Consensus        46 ~~r~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~  122 (356)
                      .+|+..+.+++..+...+++..  .+..+++.+......|+++ ..++.++++|+++.+ +.++.+.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5789999888888776654421  1223345566777778888 699999999999999 58889999999999999999


Q ss_pred             HhhccccccccccccchhhHHHHhhhhhhhee
Q 018400          123 FRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus       123 ~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ++|||++++      ++.+++++++|++++..
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            999999999      99999999999999964

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.11  E-value=4.2e-10  Score=95.96  Aligned_cols=278  Identities=15%  Similarity=0.133  Sum_probs=194.4

Q ss_pred             HHHHHHHHHhC-CCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhh
Q 018400           27 NMEVIKAAMSK-GIN-KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTL  104 (356)
Q Consensus        27 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  104 (356)
                      +-+..|+.++. +++ -+.+.+.+.+.+.+-++.+-. .+--..+.   ++...++..+++.....+..-.+++|.+...
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~fR~---t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpi   96 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEFRL---TKAKKWFPISFLLVVMIYTSSKSLQYLAVPI   96 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhheeh---hhhhhhcCHHHHHHHHHHhcccceeeeeeeH
Confidence            33445666542 333 345556666655554444322 22111122   3333344455555566666678999999999


Q ss_pred             HhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHH
Q 018400          105 STAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILG  184 (356)
Q Consensus       105 a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  184 (356)
                      -++..+++.+..+.....++|.|++..      ...+.++.++.-+.-.  .++.         +.   ........+.|
T Consensus        97 YTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~--w~D~---------q~---~~~~~~~lN~G  156 (309)
T COG5070          97 YTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVAT--WGDQ---------QA---SAFKAQILNPG  156 (309)
T ss_pred             HHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhc--cchh---------hH---HHHHhcccCCc
Confidence            999999999999999999999999999      8999888887766654  2221         00   01122356779


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccccchh-hHHHHHHHHHHhhH
Q 018400          185 GFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSD-WKLGLDI-GLVAVLYSAVIGTG  261 (356)
Q Consensus       185 ~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~g~~~~~  261 (356)
                      .+++...++.-++|....|+-.+-.+ ....-++|....+..+++...+++++..+. .....+. ...+++..|+ ++.
T Consensus       157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~sv  235 (309)
T COG5070         157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSV  235 (309)
T ss_pred             eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHh
Confidence            99999999999999988887544321 256678999999999999999877652211 1111111 2456667777 666


Q ss_pred             HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccccc
Q 018400          262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEK  329 (356)
Q Consensus       262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~  329 (356)
                      .--++-.|+++..+.++.++++.+.-.-..+-|.+++||+.+...+....+=..+..++...|.++++
T Consensus       236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66778889999999999999999999999999999999999999999888877777777666554433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.11  E-value=1.1e-09  Score=100.83  Aligned_cols=133  Identities=11%  Similarity=0.165  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHH
Q 018400          185 GFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRV  264 (356)
Q Consensus       185 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  264 (356)
                      .++.++++++||..++.+|+..++.+ +.  .++....+.++..+...... ....|+.... .+......+.......+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYL-AQVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhc-ccCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            46789999999999999998877754 43  35555666666666665321 1223433223 33334444444778889


Q ss_pred             hHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          265 GLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       265 ~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      .++++++++.+++.++++.++.|+++.+++++++||+++..+++|..++++|+.+...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.10  E-value=3.9e-09  Score=92.93  Aligned_cols=242  Identities=14%  Similarity=0.135  Sum_probs=165.1

Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc-cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhh
Q 018400           69 PQLTFSILCSFFLLSVFGCSSQIFSFVGIQY-SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIG  147 (356)
Q Consensus        69 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~  147 (356)
                      ++++.|++......   -+..+.+-.+++++ .+...=.++-+-.++-+++++++++|.|.+.+      |..++.+.-+
T Consensus        60 ~kiplk~Y~i~V~m---FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTi  130 (330)
T KOG1583|consen   60 PKIPLKDYAITVAM---FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITI  130 (330)
T ss_pred             CCCchhhhheehhe---eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhh
Confidence            55566665443322   23444455577777 44445556667899999999999999999999      9999999999


Q ss_pred             hhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHH
Q 018400          148 GAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTIL  226 (356)
Q Consensus       148 Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~  226 (356)
                      |+++.++.+.++...-  ++.=.+..+.++...+..|..+...+-+.-|.-.++++...+++. ++.+.++|....+...
T Consensus       131 GiiIcTl~s~~d~~~~--~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~  208 (330)
T KOG1583|consen  131 GIIICTLFSSKDGRSK--LSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPL  208 (330)
T ss_pred             hheeEEeecCcchhhh--hcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccch
Confidence            9999987655443320  000011112234456678988888888888888888887777764 5889999999888776


Q ss_pred             HHHHHH--------HHhcCC---CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHH
Q 018400          227 STAFAL--------IVVSEP---SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDV  295 (356)
Q Consensus       227 ~~~~~~--------~~~~~~---~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~  295 (356)
                      ++...-        ...++.   +......+..|+.++...+ .+..+.---+..-.+.++.++++...+.-.++.+++.
T Consensus       209 Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Si  287 (330)
T KOG1583|consen  209 FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSI  287 (330)
T ss_pred             HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhhee
Confidence            644320        001110   0011112223555444433 3333333344456778889999999999999999999


Q ss_pred             HHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          296 VIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       296 ~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      +.|+.++++..|+|..++..|.+++..
T Consensus       288 iyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  288 IYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             eEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988763

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=1.9e-10  Score=100.91  Aligned_cols=281  Identities=15%  Similarity=0.074  Sum_probs=193.5

Q ss_pred             HHHHHHHHhC---CC-ChhHHHHHHHHHHHHHHHHHHHHhcc----CCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400           28 MEVIKAAMSK---GI-NKYVIIVYSDALSSLFFLFCSFLFHR----SERP--QLTFSILCSFFLLSVFGCSSQIFSFVGI   97 (356)
Q Consensus        28 ~~~~k~~~~~---~~-~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al   97 (356)
                      -...|+.++.   .+ .|..+..+..+....+-..+.+...+    ...|  +++.+..+...-+.+.-.....+-...+
T Consensus        44 vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL  123 (347)
T KOG1442|consen   44 VFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCL  123 (347)
T ss_pred             hhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceeh
Confidence            3455666552   12 36666777766655444433332222    1112  2444455555555544433344444788


Q ss_pred             hccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCC
Q 018400           98 QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSP  177 (356)
Q Consensus        98 ~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~  177 (356)
                      +|.+++---+--+++.+|+.+++++++|+|-+..      -..+-.+.++| +.+.   -+++              +..
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~G-F~lG---vdqE--------------~~~  179 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILG-FGLG---VDQE--------------GST  179 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheeh-heec---cccc--------------ccc
Confidence            9999998888889999999999999999999988      44444443333 2221   1110              123


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHHHHHHHHHhcCCC--ccccc-chhhHHHHH
Q 018400          178 QLSWILGGFFLAAEAFMNSAWFILQALILRKFAA-VLIIMFYLFFFNTILSTAFALIVVSEPS--DWKLG-LDIGLVAVL  253 (356)
Q Consensus       178 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~l~  253 (356)
                      +.-.+.|.++...+.++-|+..+.+||......| -...++|....+.++++|...+-++-..  .++.. ....|..+.
T Consensus       180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt  259 (347)
T KOG1442|consen  180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT  259 (347)
T ss_pred             CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence            4556889999999999999999999987665543 5678889999999999988875433111  22222 334577777


Q ss_pred             HHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccccccccc
Q 018400          254 YSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTED  333 (356)
Q Consensus       254 ~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~~~  333 (356)
                      ..|+++..++|.. .+-+|.++|.+.++-....-..-.+++..+++|.-+..-|-|-++++.|...+.+.|.++.+++.+
T Consensus       260 LsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~  338 (347)
T KOG1442|consen  260 LSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA  338 (347)
T ss_pred             HHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence            7888666665544 367899999999999999999999999999999999999999999999999998887766555443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.10  E-value=1.4e-09  Score=90.62  Aligned_cols=138  Identities=14%  Similarity=0.171  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh------chhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc---cc------chhh
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKF------AAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK---LG------LDIG  248 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~------~~~~  248 (356)
                      |.++++.+.++.|++.++.|+..++.      .|+.....+....+.+++.+...+.+.+.....   ..      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999987772      269999999999999999999987766431110   00      1123


Q ss_pred             HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      +..++..|+ .........+..+++.+|.+.++...+..+..++.+++++||+++..+++|.++.++|.+++++
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            445555565 4556667777999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.06  E-value=1.7e-09  Score=100.45  Aligned_cols=138  Identities=14%  Similarity=0.114  Sum_probs=110.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccchhhHHHHHHHHH
Q 018400          180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK--LGLDIGLVAVLYSAV  257 (356)
Q Consensus       180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~  257 (356)
                      +..+|.+++++++++|+...+..|.. .+.+ +.+..+++..++.+++.+......+ .....  ......+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence            45689999999999999999999765 6675 9999999999998877766553321 11110  0011222 2233555


Q ss_pred             HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      +..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5777889999999999999999999999999999999999999999999999999999988765

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.06  E-value=3.1e-09  Score=89.08  Aligned_cols=212  Identities=19%  Similarity=0.219  Sum_probs=154.1

Q ss_pred             HHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400           85 FGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL  164 (356)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~  164 (356)
                      +....++.|..|++..+++.++.+..+...|+.+++++.+|+|+...      ++++.++++.|++++.+.+        
T Consensus        62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D--------  127 (290)
T KOG4314|consen   62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD--------  127 (290)
T ss_pred             EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc--------
Confidence            33678899999999999999999999999999999999999999999      9999999999999997522        


Q ss_pred             CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHHH--HHHHHHHhcCCCc
Q 018400          165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA--AVLIIMFYLFFFNTILS--TAFALIVVSEPSD  240 (356)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~  240 (356)
                                 +.....+.|...+..+++..|+|-++-|+.....+  |.-..+.-..++..++.  .++.+.. .+...
T Consensus       128 -----------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T~VE~  195 (290)
T KOG4314|consen  128 -----------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAF-TGVEH  195 (290)
T ss_pred             -----------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHH-hchHH
Confidence                       23446688999999999999999999998876542  22222222222222222  2222211 12222


Q ss_pred             ccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400          241 WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV  320 (356)
Q Consensus       241 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~  320 (356)
                      |..-....|..+...+.+.... .++-+.++....|...|+-+....+-....+.++-+-..+.....|..+|+.|.++.
T Consensus       196 ~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  196 LQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             HHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            3211122455554444333322 344567788888999999888999999999998766678889999999999999887


Q ss_pred             eec
Q 018400          321 MWG  323 (356)
Q Consensus       321 ~~~  323 (356)
                      ...
T Consensus       275 iiP  277 (290)
T KOG4314|consen  275 IIP  277 (290)
T ss_pred             ecc
Confidence            643

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.04  E-value=1.4e-07  Score=88.04  Aligned_cols=296  Identities=11%  Similarity=0.046  Sum_probs=180.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hhHHHHHHHHHHHHHHHHHHHHhccC---CCCCCcHHHHHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGIN--KYVIIVYSDALSSLFFLFCSFLFHRS---ERPQLTFSILCSFFLLSV   84 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~--~~~~~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~g~   84 (356)
                      -..|+++.+++.++||+.++-.|.. + ..+  .+..+ .-.+...+.-+....+..+.   ...+.+.+.+...++.|+
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~W~v-~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETMWSV-GGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-C-CCchhHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            5679999999999999999999994 3 333  22221 11111111111111111110   113346677888888888


Q ss_pred             HHHHHHHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccc---cccccccccchhhHHHHhhhhhhheeccCCCC
Q 018400           85 FGCSSQIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKL---NWENKSSQAKSLGTFASIGGAFVVTFYKGPPL  160 (356)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~---~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~  160 (356)
                      +-.+++..++.++++.+.+.+..+.. ++-++..++..++++|-.   +-.  ..+.-.+|+++.++|+++... .+..-
T Consensus        82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~~k  158 (345)
T PRK13499         82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQLK  158 (345)
T ss_pred             HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhhhc
Confidence            88999999999999999999988855 899999999999998754   222  233367889999999999874 11100


Q ss_pred             ccCCCCCCCCCccCC--CCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHH-HhhchhHHHHHHHHH---HHHHHH
Q 018400          161 IGELSHSGSPRRLLL--SPQLSWILGGFFLAAEAFMNSAWF-------ILQALIL-RKFAAVLIIMFYLFF---FNTILS  227 (356)
Q Consensus       161 ~~~~~~~~~~~~~~~--~~~~~~~~G~~~~l~s~~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~~~---~~~v~~  227 (356)
                               +.+.++  +++.+..+|.++++++.+.++.|.       ...+... .+. |+.....-+..   .+..+.
T Consensus       159 ---------~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        159 ---------ERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             ---------ccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCC-CchHHHHHHHHHHHHHHHHH
Confidence                     000000  234567899999999999999999       3333211 112 23332222222   333322


Q ss_pred             -HHHHHH---HhcCCCcc-cccc-----hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeec---cc-hhHHHHHHHH
Q 018400          228 -TAFALI---VVSEPSDW-KLGL-----DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSM---FK-PLAIVFSIVM  293 (356)
Q Consensus       228 -~~~~~~---~~~~~~~~-~~~~-----~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~---~~-~~~pv~a~~~  293 (356)
                       .....+   .+++.... +...     ......-...|+ .=.++.++|..+-++.+......   +. .+..+++.++
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence             222221   11111101 1111     111112233444 56677888888888886655444   33 7777999999


Q ss_pred             HHHHhcCccc------chhhhhHHHHHHhhhhheec
Q 018400          294 DVVIVGDAFC------LGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       294 ~~~~~ge~~~------~~~~iG~~li~~g~~l~~~~  323 (356)
                      +.+ ++|.=+      ...++|+++++.|..+....
T Consensus       308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            995 899766      56789999999998887544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.04  E-value=7.1e-09  Score=96.05  Aligned_cols=134  Identities=13%  Similarity=0.072  Sum_probs=109.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS   89 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   89 (356)
                      ..|.++.++++++|+...+..|...+ +.++..... -.+.+++++.++......  ....+...+...+..|+++ .+.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            45899999999999999999999976 677776654 445556666665544332  1223445555566788888 899


Q ss_pred             HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      +.++++++++.+++.++.+.+++|+++.++++++++|+++..      +++|..+.+.|++....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999      99999999999988863

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.03  E-value=8.1e-09  Score=95.63  Aligned_cols=135  Identities=15%  Similarity=0.025  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS   89 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   89 (356)
                      ..|.++.++++++|+......|.... . ++.....++...+.+.+.+.............+...|......++++ .+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL-P-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC-C-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999743 2 34566678888888877776554332111112456788888888888 899


Q ss_pred             HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      +.+++.++++.++++++.+..+.|+++.++++++++|+++..      +++|..+.+.|+.+..
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999      9999999999998875

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.99  E-value=3.1e-08  Score=91.62  Aligned_cols=274  Identities=15%  Similarity=0.153  Sum_probs=153.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS   88 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   88 (356)
                      ..-|.+..++++++-+....+.|.... ..+.   .-.|.              +++.++..+    ...++.|+.. ..
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~-r~~~---~~~~~--------------~~~~~~~l~----~~~W~~G~~~~~~   62 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHL-RLPR---GSLRA--------------GSGGRSYLR----RPLWWIGLLLMVL   62 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc---ccccc--------------cchhhHHHh----hHHHHHHHHHHhc
Confidence            445888888888999988888888754 1111   00000              000011111    1234445555 67


Q ss_pred             HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400           89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG  168 (356)
Q Consensus        89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~  168 (356)
                      +..+.+.|+.+.|.+..+.+..+.-++..+++..++|||++++      .+.|..++++|..++..+.+++.+.     .
T Consensus        63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~~~~~~~-----~  131 (300)
T PF05653_consen   63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFAPKEEPI-----H  131 (300)
T ss_pred             chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeCCCCCCc-----C
Confidence            7788889999999999999999999999999999999999999      9999999999999887544322100     0


Q ss_pred             CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH-------HHHHHHHhcCCCcc
Q 018400          169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILS-------TAFALIVVSEPSDW  241 (356)
Q Consensus       169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~-------~~~~~~~~~~~~~~  241 (356)
                      +..+....-.+......+..... +...+.....+|..++.  ...........++.-.       ..+..... +..+.
T Consensus       132 t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~~--i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~-g~~~f  207 (300)
T PF05653_consen  132 TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRRN--ILVYISICSLIGSFTVLSAKAISILIKLTFS-GDNQF  207 (300)
T ss_pred             CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhcccc--eEEEEEEeccccchhhhHHHHHHHHHHHHhc-Cchhh
Confidence            00000000000001111111111 12222222223322221  1111111111111110       11111111 11111


Q ss_pred             cccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHH-HHHHHHHHHhcCcc--cc----hhhhhHHHHH
Q 018400          242 KLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIV-FSIVMDVVIVGDAF--CL----GSLIGAMIIV  314 (356)
Q Consensus       242 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv-~a~~~~~~~~ge~~--~~----~~~iG~~li~  314 (356)
                        ..+..|..++.. +.+........++++++.+++.+.++.+..-. .+++-+.++++|.-  +.    ....|+.+++
T Consensus       208 --~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii  284 (300)
T PF05653_consen  208 --TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII  284 (300)
T ss_pred             --hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence              222345444444 33667777788899999999999988776654 45555677778743  33    3457888899


Q ss_pred             Hhhhhheec
Q 018400          315 AGFYAVMWG  323 (356)
Q Consensus       315 ~g~~l~~~~  323 (356)
                      .|+++....
T Consensus       285 ~GV~lL~~~  293 (300)
T PF05653_consen  285 IGVFLLSSS  293 (300)
T ss_pred             Hhhheeecc
Confidence            999988643

>TIGR00688 rarD rarD protein

Probab=98.98  E-value=4.9e-09  Score=95.17  Aligned_cols=136  Identities=13%  Similarity=0.137  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC---Ccccccchhh-HHHHHHHHHH
Q 018400          183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP---SDWKLGLDIG-LVAVLYSAVI  258 (356)
Q Consensus       183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~g~~  258 (356)
                      +|.++.++++++|+...+..|. ..+.+ +.++.+++++++.+++.+.........   ..++...... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            4788999999999999999997 45675 999999999999888766654332211   0111111112 334455565 


Q ss_pred             hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      .....+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999987664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.97  E-value=2.6e-08  Score=87.99  Aligned_cols=279  Identities=15%  Similarity=0.108  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHHHh---CCCC----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC-------------cHHHHHHHHHHH
Q 018400           24 QVSNMEVIKAAMS---KGIN----KYVIIVYSDALSSLFFLFCSFLFHRSERPQL-------------TFSILCSFFLLS   83 (356)
Q Consensus        24 ~g~~~~~~k~~~~---~~~~----~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g   83 (356)
                      -.++-+++|++-+   ++.|    |+.....-++.=..+++.+..++.+...+.-             +.+ -..++.-.
T Consensus        15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pa   93 (372)
T KOG3912|consen   15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPA   93 (372)
T ss_pred             ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChH
Confidence            3456777787732   1222    5544444444444555555444444222110             111 11233345


Q ss_pred             HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccC
Q 018400           84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGE  163 (356)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~  163 (356)
                      ++-..+..+.+.|+++++++.-..+-....+|+.+++.-+++.+++.+      ||+|+...++|++.+...+-..    
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~~~----  163 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDVHL----  163 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeeccc----
Confidence            666788888999999999999999999999999999999999999999      9999999999999986421110    


Q ss_pred             CCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhc---C--
Q 018400          164 LSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVS---E--  237 (356)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~---~--  237 (356)
                             ..+.-++..+-..|+++.+.+=+..|..+++-+|..++.+ +|.....|..+++.+++-.++..+..   +  
T Consensus       164 -------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s  236 (372)
T KOG3912|consen  164 -------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS  236 (372)
T ss_pred             -------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence                   0001123345578999999999999999999999888754 69999999999997766555543321   1  


Q ss_pred             CC-cccccchhhHHH---------HHHHHHHhhHHHHhHHHh----hhccCCCceeeccchhHHHHHHHHHHHHhcCccc
Q 018400          238 PS-DWKLGLDIGLVA---------VLYSAVIGTGFRVGLCTW----CLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFC  303 (356)
Q Consensus       238 ~~-~~~~~~~~~~~~---------l~~~g~~~~~~~~~~~~~----al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~  303 (356)
                      .+ ..+.. ..+|.-         .++..+.+..++..+++.    --|..++++=..+-.+...+-=+++.....|.+.
T Consensus       237 fS~~~~g~-~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  237 FSCNPRGV-LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             CcCCCCcc-hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence            10 11110 001110         112222233333444442    2455666666777777777777777888889999


Q ss_pred             chhhhhHHHHHHhhhhhe
Q 018400          304 LGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       304 ~~~~iG~~li~~g~~l~~  321 (356)
                      ..|+.|.++.+.|+++++
T Consensus       316 llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999986

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.96  E-value=1.6e-08  Score=93.88  Aligned_cols=132  Identities=16%  Similarity=0.114  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ   90 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   90 (356)
                      ..|.+++++++++|+...+..|...+ +.++.....   ..+.+.+.+....... .....+...+...+..|+...+.+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSPQ-PAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhcC-ccccCCHHHHHHHHHHHHHHHHHH
Confidence            45889999999999999999999865 567765432   2233333332223221 122345667777777775558899


Q ss_pred             HHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        91 ~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      .++++++++.+++.++.+.++.|+++.++++++++|+++..      +++|.++.+.|+.+..
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999999999999999      9999999999998875

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.89  E-value=2e-08  Score=80.89  Aligned_cols=120  Identities=13%  Similarity=0.133  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR  263 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  263 (356)
                      |.++.+.+.++-+...++-|+-.++.+ .......  .   . ...... .             .....++.|+++++++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~--~---~-~~~~~~-~-------------~p~~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD--F---I-AALLAF-G-------------LALRAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH--H---H-HHHHHH-h-------------ccHHHHHHHHHHHHHH
Confidence            678889999999999999999888764 2221111  0   0 000000 0             1112467888899999


Q ss_pred             HhHHHhhhccCCCceeeccchhHHHHHHHHHHH--HhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          264 VGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVV--IVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       264 ~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~--~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      +.+|.+++++.|.+.+.++....++...+.++.  ++||++|+.+++|..+|++|+++..+.+
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999998888888885  7999999999999999999999986543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.89  E-value=6.4e-08  Score=91.84  Aligned_cols=136  Identities=10%  Similarity=0.119  Sum_probs=101.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-hHHHHHHHHHHHHHHHHHHHHhccCCC----CCCcHHHHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINK-YVIIVYSDALSSLFFLFCSFLFHRSER----PQLTFSILCSFFLLSVF   85 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~-~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   85 (356)
                      ..|..++++++++|+...++.|.... .+++ ....++....+.+.+.+......+...    ...+.. ....+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            34788899999999999999998877 5554 355556666555555444444322111    112222 2223334444


Q ss_pred             HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ..+.+.++++++++.+++.++...++.|+++.++++++++|++++.      +++|.++.+.|+.++..
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            4668889999999999999999999999999999999999999999      99999999999999864

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.83  E-value=1.6e-07  Score=87.32  Aligned_cols=136  Identities=14%  Similarity=0.137  Sum_probs=105.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh---hHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCcHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINK---YVIIVYSDALSSLFFLFCSFLFHRSE-----RPQLTFSILCSFFLL   82 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~---~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~   82 (356)
                      ..|.++.++++++|+...+..|...+ ..++   .....+-...+.+.+....+......     ....+...|...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMS-HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            46899999999999999999999764 2222   23333334443333333322222211     123466778888888


Q ss_pred             HHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           83 SVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        83 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      |++. .+.+.+++.++++.++++++.+..+.|++..++++++++|+++..      +++|..+.++|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence            9888 899999999999999999999999999999999999999999999      9999999999998874

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.82  E-value=5.9e-08  Score=85.37  Aligned_cols=226  Identities=10%  Similarity=0.117  Sum_probs=165.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheec
Q 018400           76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFY  155 (356)
Q Consensus        76 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~  155 (356)
                      |+.+..++.+......+..-++.|.+=..-.+...+--+=+++.+.++=+.|.++.      ...+..+..+|.++.+.-
T Consensus       106 ~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLA  179 (367)
T KOG1582|consen  106 WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLA  179 (367)
T ss_pred             hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhc
Confidence            55556666665555566666777776544445555544445667778888999999      899999999999998752


Q ss_pred             cCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHH
Q 018400          156 KGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIV  234 (356)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~  234 (356)
                      +..                 .+.+.+..|..+.-++-++-|.--.+++|..+..+ ...++.++...++.+.++......
T Consensus       180 Ds~-----------------~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT  242 (367)
T KOG1582|consen  180 DSQ-----------------TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT  242 (367)
T ss_pred             ccc-----------------cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence            221                 12334457888887888888887778888888754 477889999999999888877765


Q ss_pred             hcCCCcccccch---hhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHH
Q 018400          235 VSEPSDWKLGLD---IGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAM  311 (356)
Q Consensus       235 ~~~~~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~  311 (356)
                      ++-.+.|+.-..   ......+.... .+.++...-...++..++.+++.+....-.+++++++++|..++|....-|..
T Consensus       243 ge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gl  321 (367)
T KOG1582|consen  243 GELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGL  321 (367)
T ss_pred             ccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhH
Confidence            543444442221   13344444443 44566666667788899999999999999999999999999999999999999


Q ss_pred             HHHHhhhhheeccc
Q 018400          312 IIVAGFYAVMWGKS  325 (356)
Q Consensus       312 li~~g~~l~~~~~~  325 (356)
                      +++.|+++-.+.|+
T Consensus       322 lv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  322 LVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHhhcccCC
Confidence            99999999887774

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.73  E-value=3.5e-08  Score=77.99  Aligned_cols=107  Identities=13%  Similarity=0.262  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHH
Q 018400          218 YLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVI  297 (356)
Q Consensus       218 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~  297 (356)
                      +.+.++.+..........+-...+.......+...+..|++....++.++.+++++.++ .++++..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            45556666666655543221111222222345566667776667899999999999994 88899999999999999999


Q ss_pred             hcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          298 VGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       298 ~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      ++|+++..+++|..++++|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999877544

>TIGR00803 nst UDP-galactose transporter

Probab=98.69  E-value=6.5e-08  Score=85.93  Aligned_cols=209  Identities=11%  Similarity=-0.025  Sum_probs=124.9

Q ss_pred             hhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCC--cc------CCCCCCCCCcc
Q 018400          102 PTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL--IG------ELSHSGSPRRL  173 (356)
Q Consensus       102 ~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~--~~------~~~~~~~~~~~  173 (356)
                      ........+..++++++..+...++|.++.      |+++.++...|++.-...+.+..  ..      ..+.+.+++  
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~--   75 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA--   75 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--
Confidence            344556677888888888888888888877      88888888888775432110000  00      000000000  


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC-CcccccchhhHHH
Q 018400          174 LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDIGLVA  251 (356)
Q Consensus       174 ~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~  251 (356)
                      .....++...|....+.+.++-+...+++++..++.+ ............+.+...........+. ..+...  ..+..
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  153 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT  153 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence            0111235567777788888887888888887755542 1111112222222222111111111111 111100  00111


Q ss_pred             HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400          252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV  320 (356)
Q Consensus       252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~  320 (356)
                      ..+.-++....+..+-.+.+|+.++...+....++++++.+++++++||+++..+++|..+++.|++++
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            111111245567777889999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.63  E-value=1.3e-06  Score=72.69  Aligned_cols=133  Identities=17%  Similarity=0.242  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCChhHHHHHHHHHHHHHHHHHHHHhccCCC-CC---C-------cHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSK------GINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQ---L-------TFSI   75 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~---~-------~~~~   75 (356)
                      |.++++.+.++.+.-.+..|..+++      ..++..+..+-...+.+++.+.+.+.++... +.   .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678889999999999999998875      6889999999999999999888776654331 10   0       2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400           76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV  151 (356)
Q Consensus        76 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  151 (356)
                      +...+..|+++...+.+.+..++++++-..+++...-.+.+.++++++++|+++..      ++.|+.++++|.++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            55666667777999999999999999999999999999999999999999999999      99999999999876

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.60  E-value=3.4e-07  Score=85.19  Aligned_cols=138  Identities=17%  Similarity=0.173  Sum_probs=106.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCC-CCC--------CcHHHHHH-
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSE-RPQ--------LTFSILCS-   78 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-~~~--------~~~~~~~~-   78 (356)
                      ...|.++.+++++.|+...+..|...++ ++++..+..+....+++.+.|+........ .+.        ........ 
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3458999999999999999999998642 489999999999999888888776543211 010        00011111 


Q ss_pred             HHHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           79 FFLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        79 ~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      .+..+... ...+.+++.+++++++..+++...+.|+++.++++++++|+++..      +++|.++++.|+.+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHH
Confidence            22223222 444567788999999999999999999999999999999999999      9999999999999875

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.56  E-value=1.4e-06  Score=80.49  Aligned_cols=130  Identities=13%  Similarity=0.101  Sum_probs=103.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHH---HHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSD---ALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG   86 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   86 (356)
                      ..+|+++.+++++.++......|..   +.+|....+...   +++..++.+..  + + .+|. +.+..+..++.|++.
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I-L-AKPL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h-c-ccch-HHHHHHHHHHHHHHH
Confidence            3679999999999999999999976   468887744444   44444433321  1 1 1222 344555566688888


Q ss_pred             HHHHHHHHHHhh-ccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccch----hhHHHHhhhhhhhe
Q 018400           87 CSSQIFSFVGIQ-YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKS----LGTFASIGGAFVVT  153 (356)
Q Consensus        87 ~~~~~~~~~al~-~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~----~g~~l~~~Gv~lv~  153 (356)
                      .+.+.+|+.+.+ +.+++.++.+.+..|+...+.+++++||+.+++      ++    +|.++.+.|+.++.
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            999999999999 999999999999999999999999999999999      99    99999999988874

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.52  E-value=4.1e-06  Score=76.78  Aligned_cols=133  Identities=15%  Similarity=0.203  Sum_probs=105.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH-HHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-H
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIV-YSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-C   87 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   87 (356)
                      ...|..+.+++++.|+...+..|...  ..++..... +.......+..+  ....... ...+.+.+......|+++ .
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLL--FFLSGFG-APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHH--HHhcccc-ccCCHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999875  345555555 333322222222  1222111 334667888899999999 6


Q ss_pred             HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ..+.+++.+++..+++.++.+..+.|++..++++++++|+++..      +++|.++.+.|+.+..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~  286 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999      9999999999998875

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.50  E-value=2.7e-06  Score=80.84  Aligned_cols=139  Identities=12%  Similarity=0.089  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400          182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG  261 (356)
Q Consensus       182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  261 (356)
                      ..-.++.+.--.+...+++.+|...+..+-|.+.+.+++.++.++..+.......+....+ .....+..++..|++.. 
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~-  125 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL-  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-
Confidence            3344444545555566788889988888449999999999998876554331111111111 12235667777887444 


Q ss_pred             HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      ..+...+.++++.+++.+.++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            4577777999999999999999999999999999999999999999999999999998763

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.49  E-value=6.2e-07  Score=70.44  Aligned_cols=67  Identities=15%  Similarity=0.126  Sum_probs=62.0

Q ss_pred             HHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          255 SAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       255 ~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      .++++.++++.++..++++.|.+.+-++..+.++++.+++++++||+++..+++|..++++|+.+..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3446778899999999999999999999999999999999999999999999999999999998764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.47  E-value=3.1e-08  Score=85.98  Aligned_cols=278  Identities=14%  Similarity=0.105  Sum_probs=183.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      .++.+++.++.||+.+.+....   +=+|.+-..--- ++++++..+.++..   .|..+.+.+..-++.|.+..++|..
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT-~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~Ws~GQ~~   75 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTT-LGALIFAIIVFLFV---SPELTLTIFIVGFISGAFWSFGQAN   75 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhcc-HHHHHHHHHHheee---cCccchhhHHHHHHhhhHhhhhhhh
Confidence            5678899999999998877655   335555543333 34444444444443   3455667777778888888999999


Q ss_pred             HHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400           93 SFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR  171 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~  171 (356)
                      .+.|.++.+++.+..+.+ ++-+-+.+++.+.++|-.+...  -+-..+++++.++|+.+-.. +.+.            
T Consensus        76 Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~-~~~~------------  140 (288)
T COG4975          76 QFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSK-QDRN------------  140 (288)
T ss_pred             hhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeee-eccc------------
Confidence            999999999999999976 8889999999999999887661  00012355566667666553 2211            


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHH
Q 018400          172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA  251 (356)
Q Consensus       172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (356)
                      +-.+++.++.-+|....+.|.+.|-.|.++.+...  . |......- ...+.++.....-....+. ..   .+..|..
T Consensus       141 nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLP-qAiGMv~~ali~~~~~~~~-~~---~K~t~~n  212 (288)
T COG4975         141 NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILP-QAIGMVIGALILGFFKMEK-RF---NKYTWLN  212 (288)
T ss_pred             cccccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhH-HHHHHHHHHHHHhhccccc-ch---HHHHHHH
Confidence            01123445567899999999999999999888653  3 23332222 2233333222222121111 11   1122322


Q ss_pred             HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchh----hhhHHHHHHhhhhhee
Q 018400          252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGS----LIGAMIIVAGFYAVMW  322 (356)
Q Consensus       252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~----~iG~~li~~g~~l~~~  322 (356)
                       ...|+ .=+.+...+..+.++.+..+.=.+.-+..+++.+-+.++++|+=|..+    ++|.++++.|..+...
T Consensus       213 -ii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         213 -IIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             -HhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence             23454 445677778888888888888888888889999999999999887654    5788888888766543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.44  E-value=1.2e-06  Score=68.86  Aligned_cols=68  Identities=16%  Similarity=0.146  Sum_probs=61.9

Q ss_pred             HHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           80 FLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        80 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ...++++ +.+..++..+++..|.+.+..+.++.|+++.+++++++|||++++      |++|+.+.++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            3344455 889999999999999999999999999999999999999999999      9999999999999874

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.27  E-value=5.8e-06  Score=74.96  Aligned_cols=272  Identities=15%  Similarity=0.102  Sum_probs=160.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS   88 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   88 (356)
                      ...|.+..+...++.|.++.+-|+... ....   ...              ..+...++.+  +.  ..+..|++. .+
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~-r~~~---~~~--------------ra~~gg~~yl--~~--~~Ww~G~ltm~v   76 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLK-RAGA---SGL--------------RAGEGGYGYL--KE--PLWWAGMLTMIV   76 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHH-HHhh---hcc--------------cccCCCcchh--hh--HHHHHHHHHHHH
Confidence            345777888888889999999888865 1110   000              1122222332  22  334457777 78


Q ss_pred             HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400           89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG  168 (356)
Q Consensus        89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~  168 (356)
                      +...-|.|+.+.|++..+.+..++-++.++++..++|||+++.      ..+|..+|++|-.+++...+.+....     
T Consensus        77 Gei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~haP~e~~i~-----  145 (335)
T KOG2922|consen   77 GEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHAPKEQEIE-----  145 (335)
T ss_pred             HhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEecCcccccc-----
Confidence            8888889999999999999999999999999999999999999      99999999999999986433221100     


Q ss_pred             CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH----------HHHHHHHHhcCC
Q 018400          169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTIL----------STAFALIVVSEP  238 (356)
Q Consensus       169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~~~~~~~~~~~  238 (356)
                      +..+....-.+...+.....+.  ....+-....|   +++. ...+..|..+.+.+-          ...+-....+..
T Consensus       146 t~~el~~~~~~~~Fliy~~~ii--l~~~il~~~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  146 SVEEVWELATEPGFLVYVIIII--LIVLILIFFYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             cHHHHHHHhcCccHHHHHHHHH--HHHHHHheeec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence            0000000001111111111111  11111111222   1211 222233333333331          111222122211


Q ss_pred             CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhH-HHHHHHHHHHHhcCccc------chhhhhHH
Q 018400          239 SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLA-IVFSIVMDVVIVGDAFC------LGSLIGAM  311 (356)
Q Consensus       239 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~-pv~a~~~~~~~~ge~~~------~~~~iG~~  311 (356)
                       +.  ..+..|..++.... +...-.-..++|++..+++.++++.+.. ..++++-+.+.|+|.-.      .....|+.
T Consensus       220 -ql--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~  295 (335)
T KOG2922|consen  220 -QL--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV  295 (335)
T ss_pred             -cc--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence             11  11235666665554 6667777788999999999998877654 45666778888887543      23568899


Q ss_pred             HHHHhhhhheecc
Q 018400          312 IIVAGFYAVMWGK  324 (356)
Q Consensus       312 li~~g~~l~~~~~  324 (356)
                      .++.|+.+....|
T Consensus       296 ti~~G~flL~~~k  308 (335)
T KOG2922|consen  296 TIFLGIFLLHRTK  308 (335)
T ss_pred             HhhheeeEeeeec
Confidence            9999998885443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.25  E-value=8.8e-06  Score=72.98  Aligned_cols=140  Identities=11%  Similarity=0.108  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccchhhHHHHHHHHHHhh
Q 018400          182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK-LGLDIGLVAVLYSAVIGT  260 (356)
Q Consensus       182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~  260 (356)
                      ..|.++.+.+-+.|+.--.+.|.+ ++.+ +.++..++.+.+.++...+.....+....++ ...+..+......++. .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            469999999999999988888765 5665 8999999999999988777765433221122 1222346666666664 4


Q ss_pred             HHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          261 GFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       261 ~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      .....+|.|+........+|.-++..|.+.+++|.++++|+++..|++...+-.+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999999999999999999999988876644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.23  E-value=2.8e-05  Score=62.68  Aligned_cols=117  Identities=16%  Similarity=0.173  Sum_probs=89.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHH
Q 018400           12 LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQ   90 (356)
Q Consensus        12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~   90 (356)
                      .+++..++..++-+..-++.|..++ ..+....... . ...+.  .   ..    .|       ..++..|+.. .++.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~-~~~~~--~---~~----~p-------~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F-IAALL--A---FG----LA-------LRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H-HHHHH--H---Hh----cc-------HHHHHHHHHHHHHHH
Confidence            3778888888888899999999987 4443332221 1 10000  0   00    01       1246677777 9999


Q ss_pred             HHHHHHhhccChhhHhHhhhhhHHHHHHHHHH--HhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII--FRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        91 ~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~--~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      .++..+++..+++.+..+.+..+.++.+.++.  ++||++++.      |++|+.+.++|+.++.
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999999999999889888885  899999999      9999999999999986

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.17  E-value=3.8e-05  Score=67.41  Aligned_cols=135  Identities=13%  Similarity=0.021  Sum_probs=113.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS   88 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   88 (356)
                      +..|..+.+.+..+|+..-+..|.+-. ..+...-+..-+..++++.+|+-.-...  ..-+++......+..++++ .+
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhccc
Confidence            356888999999999999999998864 4566677788889999999997643222  2223556777788888999 99


Q ss_pred             HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      .+.+-..+++..+...-+++.++.|.+..+.++++++|+++..      ||+++...+.+.+-.+
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~  281 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST  281 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999      9999999888766544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.15  E-value=4.6e-05  Score=71.30  Aligned_cols=140  Identities=11%  Similarity=0.032  Sum_probs=108.5

Q ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCC--cHHHHHHHHHHHHH
Q 018400            8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQL--TFSILCSFFLLSVF   85 (356)
Q Consensus         8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~   85 (356)
                      .+..+|-+.++++++++|...++-+...+ +.|+..+..+=.+.+.++..+.....+++....+  +.+....++.-++.
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence            45678999999999999999999999998 7888888777777777777766655665444333  33333322222222


Q ss_pred             HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ....+.+.-..+++++++...+=.-++.+++.++.++++|++++|.      .++|.++.++|.++...
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence            2666667777899999988877778899999999999999999999      99999999999998864

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.12  E-value=6.7e-07  Score=78.70  Aligned_cols=136  Identities=10%  Similarity=0.122  Sum_probs=98.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhh
Q 018400          181 WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGT  260 (356)
Q Consensus       181 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  260 (356)
                      .++|..+..++ .++...++..++....  ||++..-..+.+-.++..|..+..-.+.  +-......|  ++.=|+ ..
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~-mG  107 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGF-MG  107 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehh-hh
Confidence            46788888888 8888888888887666  5777766665555544444433221111  111111122  223344 33


Q ss_pred             HHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          261 GFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       261 ~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      ..+..+.++++++.+.+.++.+.+..|+++++++|++++|+.|....+|..+.+.|+.++.+..
T Consensus       108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            3667788899999999999999999999999999999999999999999999999999987643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.11  E-value=2.3e-05  Score=62.08  Aligned_cols=69  Identities=13%  Similarity=0.272  Sum_probs=59.4

Q ss_pred             HHHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          256 AVIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       256 g~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      .+++.++++.++..++++.|.+.+=.+ ..+..+.+.+.+++++||++++.+++|..+|++|++......
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344667899999999999999887554 568889999999999999999999999999999998885443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.96  E-value=0.00013  Score=65.74  Aligned_cols=117  Identities=14%  Similarity=0.085  Sum_probs=87.5

Q ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHH
Q 018400            8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGC   87 (356)
Q Consensus         8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   87 (356)
                      .+..++++.+++.++.+.....+.|..   +.++....+=. .++.++-..+.....+  .+ ...|..++-++.|++..
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~--~~-~~~k~~~~nil~G~~w~  206 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSK--KP-FFEKKSWKNILTGLIWG  206 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhccc--cc-ccccchHHhhHHHHHHH
Confidence            456789999999999998888888885   56776665533 3333332222222222  11 12244556677888889


Q ss_pred             HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhcccccc
Q 018400           88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE  131 (356)
Q Consensus        88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~  131 (356)
                      +.+.+++.+.+..+.+.+-.+.++..++..+-+.+++||+-+++
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            99999999999999999999999999999999999999999988

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.88  E-value=5.6e-05  Score=70.00  Aligned_cols=120  Identities=13%  Similarity=0.117  Sum_probs=90.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHh
Q 018400          180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIG  259 (356)
Q Consensus       180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  259 (356)
                      ++..|.++++.++++.+....++||...+.+ ....                  .. +....+...+..|    +.|+..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~------------------~~-~~~~~~~l~~~~W----~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSL------------------RA-GSGGRSYLRRPLW----WIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc------------------cc-cchhhHHHhhHHH----HHHHHH
Confidence            5678999999999999999999999877754 1000                  00 0000000011122    234444


Q ss_pred             hHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          260 TGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       260 ~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      ..++..+...++...|++.++++..+..++..+++..+++|+++...+.|+.+++.|..+....
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            5567778889999999999999999999999999999999999999999999999998877644

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.85  E-value=0.00022  Score=66.45  Aligned_cols=130  Identities=17%  Similarity=0.160  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHHhhc-h--hHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhh
Q 018400          195 NSAWFILQALILRKFA-A--VLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCL  271 (356)
Q Consensus       195 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al  271 (356)
                      +..+.+++++..++.. .  +..+++.+.....+...+.......+.  .   ....+.-.+..++ ...++..+-+.++
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al   85 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence            3445667777766643 3  678888888888887776665433111  1   1112333344454 5668888999999


Q ss_pred             ccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccccccc
Q 018400          272 SRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKT  330 (356)
Q Consensus       272 ~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~  330 (356)
                      ++.+.....+.....|+...+++++++|++.+..++.+..++.+|+.+....+.++++.
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            99999999999999999999999999999999999999999999999988765544443

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.81  E-value=0.00018  Score=56.18  Aligned_cols=67  Identities=19%  Similarity=0.172  Sum_probs=58.0

Q ss_pred             HHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          257 VIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       257 ~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      +++.++++.++..++++.|...+=.. ..+..+.+.+.++++|||++++.+++|..+|++|+++....
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44667889999999999998887444 66788889999999999999999999999999999998543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.71  E-value=0.00035  Score=54.36  Aligned_cols=63  Identities=10%  Similarity=0.182  Sum_probs=55.8

Q ss_pred             hhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          259 GTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       259 ~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      +..+++.+...++|+.|...+ +.......+.+.+.+++++||++++.+++|..+|+.|+....
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            567889999999999998876 566677888899999999999999999999999999998763

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.67  E-value=0.00033  Score=54.18  Aligned_cols=66  Identities=17%  Similarity=0.307  Sum_probs=57.6

Q ss_pred             HHhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400          257 VIGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       257 ~~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      +++.+.++.+...++|+.|...+ +....+..+.+.+.+++++||++++.+++|..++++|+.....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            33567889999999999998776 6666788899999999999999999999999999999988743

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.61  E-value=0.00096  Score=51.92  Aligned_cols=60  Identities=13%  Similarity=0.061  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhh
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV  152 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv  152 (356)
                      ..+..+.-.++++.|.+.+-.+ ...--+.+.+.+++++||++++.      |++|+.+.+.|++.+
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            7888888999999999988555 56888999999999999999999      999999999999886

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.61  E-value=0.00034  Score=53.61  Aligned_cols=65  Identities=23%  Similarity=0.401  Sum_probs=57.3

Q ss_pred             hhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          259 GTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       259 ~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      +..++|.+...++|+.|...+ +.......+.+.+.++++|||+.+..+++|..++++|+......
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            556889999999999998776 67777888899999999999999999999999999999887543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.58  E-value=0.0016  Score=53.11  Aligned_cols=129  Identities=10%  Similarity=0.079  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 018400           15 VGMVIVLLAQVSNMEVIKAAMSKGI-NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFS   93 (356)
Q Consensus        15 ~~~ll~~~~~g~~~~~~k~~~~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   93 (356)
                      +..+++..+-+....+.-..-+ .. +|+.-.++-+..+.+++..+..+.+++..+..+..+|+. .+.|+++...-.+.
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~-~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~   81 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGK-ALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHH
Confidence            4455555555555555555544 34 499999999999999888877766654333333334444 44889998888888


Q ss_pred             HHHhhccChhhHhHhhhh-hHHHHHHHHHH----HhhccccccccccccchhhHHHHhhhhhh
Q 018400           94 FVGIQYSSPTLSTAMLNL-IPAFTFVLAII----FRLEKLNWENKSSQAKSLGTFASIGGAFV  151 (356)
Q Consensus        94 ~~al~~~~~~~a~~l~~~-~Pv~~~lls~~----~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  151 (356)
                      .......+++.+..+.-+ +-+...++..+    .-|+++++.      |.+|+++.++|+.+
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            999999999988877664 66666666664    457899999      99999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.43  E-value=0.00068  Score=52.88  Aligned_cols=110  Identities=17%  Similarity=0.149  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400           18 VIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGI   97 (356)
Q Consensus        18 ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al   97 (356)
                      ++.+++||.+.++.|.+.. +.++..-.. |..-... .+    +           +.+.+ ..-=.++-.+...|++.+
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~-~L----l-----------~n~~y-~ipf~lNq~GSv~f~~~L   62 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIK-FL----L-----------LNPKY-IIPFLLNQSGSVLFFLLL   62 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHH-HH----H-----------HhHHH-HHHHHHHHHHHHHHHHHH
Confidence            3567899999999999987 555444331 3211111 11    0           11222 222223377788899999


Q ss_pred             hccChhhHhHhh-hhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhh
Q 018400           98 QYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV  152 (356)
Q Consensus        98 ~~~~~~~a~~l~-~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv  152 (356)
                      ...+.+.+..+. +++=+||.+.++++.+|..+++      .++|+.+.+.|+.++
T Consensus        63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            999999999996 6888999999988888888888      899999999998875

Many members are annotated as potential transmembrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.39  E-value=0.0014  Score=51.94  Aligned_cols=65  Identities=15%  Similarity=0.160  Sum_probs=58.1

Q ss_pred             HHHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           83 SVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        83 g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      .+.. +.+..++..++++.|.+.+-.+ ...--+.+.++++++++|++++.      +++|+.+.++|++.+-
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence            3444 8899999999999999999666 46899999999999999999999      9999999999998885

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.38  E-value=0.0028  Score=51.77  Aligned_cols=132  Identities=15%  Similarity=0.122  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR  263 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  263 (356)
                      ..++++.++.+-++......++.++..++..-++..+..+.+....+.++..++  ..+...+..|+..+ -|+ .....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence            357788899999999999999988876699999999999999998888766543  23222222343333 444 55566


Q ss_pred             HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHH----HhcCcccchhhhhHHHHHHhhhh
Q 018400          264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVV----IVGDAFCLGSLIGAMIIVAGFYA  319 (356)
Q Consensus       264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~----~~ge~~~~~~~iG~~li~~g~~l  319 (356)
                      ..+..+..++.+++....+. .-+.+.+.++|.+    .-++++++.+++|..++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77788889999988776554 4466677777775    23467899999999999999864

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.32  E-value=0.079  Score=49.24  Aligned_cols=299  Identities=14%  Similarity=0.083  Sum_probs=174.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHH--HHHhccCC---CCCCcHHHHHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFC--SFLFHRSE---RPQLTFSILCSFFLLSV   84 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~--~~~~~~~~---~~~~~~~~~~~~~~~g~   84 (356)
                      -..|+++-.++.++-|...+-.|..-+=....+.++   ..+-.-+..|.  +++.-+..   ....+...+....+.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv---~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV---QGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH---HHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            567899999999999999999998843223344433   12222222232  22222211   12334466777788888


Q ss_pred             HHHHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccc-cccccccccchhhHHHHhhhhhhheeccCCCCcc
Q 018400           85 FGCSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKL-NWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIG  162 (356)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~-~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~  162 (356)
                      +-+++...|=.+++|++.+...-+ ..+..++-.++-.++.++-- -..+..++..++|++++++|++++.. .|..-  
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~-AG~~K--  158 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK-AGSMK--  158 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH-HHHhh--
Confidence            889999999999999999877444 55777777777666644210 01122455589999999999999863 22110  


Q ss_pred             CCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH--HHhh-----chhH----HHHHHHHHHHHHHHHHHH
Q 018400          163 ELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALI--LRKF-----AAVL----IIMFYLFFFNTILSTAFA  231 (356)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~--~~~~-----~~~~----~~~~~~~~~~~v~~~~~~  231 (356)
                          |...  ..+.++.+..+|.+.++.+++.-|..++-...-  .++.     .|+.    ......+.-+.+..+...
T Consensus       159 ----e~~~--~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc  232 (344)
T PF06379_consen  159 ----EKEL--GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC  232 (344)
T ss_pred             ----hhhh--ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence                0000  011234466789999999999888877655311  1110     0111    122333344444444444


Q ss_pred             HHHhc---CCC---cccccc---hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCc----eeeccchhHHHHHHHHHHHHh
Q 018400          232 LIVVS---EPS---DWKLGL---DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPL----YVSMFKPLAIVFSIVMDVVIV  298 (356)
Q Consensus       232 ~~~~~---~~~---~~~~~~---~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~----~~s~~~~~~pv~a~~~~~~~~  298 (356)
                      ++...   +..   +.....   ......-+..|+ .=...+++|..+-.+.+..    --.+.+.+..+++-+++.+ +
T Consensus       233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l  310 (344)
T PF06379_consen  233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L  310 (344)
T ss_pred             HHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence            43322   211   111111   122333334454 4456777788887777754    3356777888888999987 5


Q ss_pred             cCc------ccchhhhhHHHHHHhhhhhee
Q 018400          299 GDA------FCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       299 ge~------~~~~~~iG~~li~~g~~l~~~  322 (356)
                      +|.      .-...++|+.+++.++.++-+
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            773      224457888888888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.29  E-value=0.0012  Score=50.02  Aligned_cols=56  Identities=20%  Similarity=0.351  Sum_probs=35.3

Q ss_pred             HhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 018400          258 IGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII  313 (356)
Q Consensus       258 ~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li  313 (356)
                      .+.++++.++..++|+.|.+.+ .....+..+...+.+++++||++++.+++|..+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3667889999999999999998 4556789999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.26  E-value=0.0036  Score=48.43  Aligned_cols=61  Identities=10%  Similarity=-0.026  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ..+..+...+++..|.+.+-.+ ...-.+.+.+.+++++||++++.      |++|+.+.++|++.+-
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            7888889999999999988555 55889999999999999999999      9999999999999873

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.23  E-value=0.0023  Score=49.16  Aligned_cols=61  Identities=13%  Similarity=0.031  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHhhccChhhHh-HhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           87 CSSQIFSFVGIQYSSPTLST-AMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~-~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ..++.++-.++++.|.+.+- +....-.+.+.+.+++++||+.+..      |++++.+.++|++.+-
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            78888899999999999884 4466899999999999999999999      9999999999999874

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.23  E-value=0.0035  Score=48.96  Aligned_cols=64  Identities=16%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             HHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           84 VFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        84 ~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      +.+ .++..++..+++..|.+.+-.+ ...--+.+.+++++++||++++.      +++|+.+.++|++.+-
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            444 7888888999999999999666 56888999999999999999999      9999999999999985

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.19  E-value=0.0059  Score=50.02  Aligned_cols=138  Identities=14%  Similarity=0.148  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400          182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG  261 (356)
Q Consensus       182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  261 (356)
                      .+..++.++++.+-.+..-...++.+..++|..-.+..+.++++.+..+.++.+ +..++....+..|+.. .-|+++. 
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~-~GG~lGa-   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAW-IGGLLGA-   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHH-Hccchhh-
Confidence            456788899999999999999999888766888889999999999988888743 3333332222233332 2333222 


Q ss_pred             HHHhHHHhhhccCCCce-eeccchhHHHHHHHHHHHHhc----CcccchhhhhHHHHHHhhhhhee
Q 018400          262 FRVGLCTWCLSRTGPLY-VSMFKPLAIVFSIVMDVVIVG----DAFCLGSLIGAMIIVAGFYAVMW  322 (356)
Q Consensus       262 ~~~~~~~~al~~~~~~~-~s~~~~~~pv~a~~~~~~~~g----e~~~~~~~iG~~li~~g~~l~~~  322 (356)
                      .-...-.....+.+++. ......-+.+.+.++|-+=+.    .+++...++|..++++|+++..+
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            22233334555655543 445555667777777766544    57899999999999999666544

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.00  E-value=0.002  Score=58.00  Aligned_cols=77  Identities=17%  Similarity=0.233  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400          249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK  326 (356)
Q Consensus       249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  326 (356)
                      ......-++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..++++|+.+.......
T Consensus        17 ~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   17 TLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            344444454 46677788889999999999999999999999999999999999999999999999999987655443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.72  E-value=0.018  Score=43.59  Aligned_cols=52  Identities=19%  Similarity=0.078  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHH
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFA  144 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l  144 (356)
                      +.+..++..++++.|.+.+-.+ ..+..+.+.+.+.+++||++|+.      |+.|+.+
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            7888999999999999999555 56999999999999999999999      9999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.52  E-value=0.015  Score=54.16  Aligned_cols=140  Identities=10%  Similarity=0.121  Sum_probs=107.4

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHHHHHHhcc---CCCCCCcHHHHHHHHHH
Q 018400            9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHR---SERPQLTFSILCSFFLL   82 (356)
Q Consensus         9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   82 (356)
                      +...|-++.+++++++|...++.|.-.+++   +|.-.+-.+-.+...++++|..++.+.   +...--+..+....+..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            346789999999999999999999987633   444444444445566777765554332   22222233556667778


Q ss_pred             HHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           83 SVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        83 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ++++ .++.++|.+|.-.+++-.+++-.+++.-..++.-.++-+.++++.      .++|.+..++|-+.+..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence            8888 999999999999999999999988777777788888889999999      99999999999888864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.45  E-value=0.0097  Score=55.23  Aligned_cols=137  Identities=15%  Similarity=0.169  Sum_probs=107.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHh---CCCChhHHHHHHHHHHHHHHH-HHHHHhccCCC-----CCCcHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMS---KGINKYVIIVYSDALSSLFFL-FCSFLFHRSER-----PQLTFSILCSFF   80 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~---~~~~~~~~~~~r~~~~~~~l~-~~~~~~~~~~~-----~~~~~~~~~~~~   80 (356)
                      ...|.+....+.+..+.-.++.|..+.   ..++++....+-.-++.+.++ |+.........     ...+.. .....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            467999999999999999999999994   248888887777777777777 76544333221     122333 33334


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        81 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      +..++....|...|..+..++|-.-++....--+++...++++++++.++.      +..|.+++++|+++-.
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence            444666888899999999999999999988888888899999999999999      9999999999999875

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.44  E-value=0.0016  Score=57.20  Aligned_cols=133  Identities=11%  Similarity=-0.012  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR  263 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  263 (356)
                      +.+.+++=++.|+.--....|.  .. +|...+.-..+-+.++.+++.++ ..+...+     ..+..-+..|. .=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG-~p~qQ~lGtT~GALifaiiv~~~-~~p~~T~-----~~~iv~~isG~-~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GG-KPYQQTLGTTLGALIFAIIVFLF-VSPELTL-----TIFIVGFISGA-FWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CC-ChhHhhhhccHHHHHHHHHHhee-ecCccch-----hhHHHHHHhhh-Hhhhh
Confidence            4577888888998766665553  22 36666666666666666666654 2222111     13334444555 44578


Q ss_pred             HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhh----hhHHHHHHhhhhheecccc
Q 018400          264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSL----IGAMIIVAGFYAVMWGKSK  326 (356)
Q Consensus       264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~----iG~~li~~g~~l~~~~~~~  326 (356)
                      +..++++.+..+.+++.++. ..+-+-+.+++++.|+|..+..+.    ++.++++.|+++..+.++.
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            99999999999999998875 477888899999999999987765    3457788898888766553

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.42  E-value=0.14  Score=48.21  Aligned_cols=145  Identities=13%  Similarity=0.029  Sum_probs=88.4

Q ss_pred             HHhhhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChhHHHHHHHH---HHHHHHHH-HHHHh--ccCCC-----C
Q 018400            8 MRAALPSVGMVIVLLAQVSNM-------EVIKAAMSKGINKYVIIVYSDA---LSSLFFLF-CSFLF--HRSER-----P   69 (356)
Q Consensus         8 ~~~~~~~~~~ll~~~~~g~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~~~l~~-~~~~~--~~~~~-----~   69 (356)
                      .+..||++.++++.+..+...       +..+.+.+.+.++.....-...   ++..+.-+ ++.++  +++..     +
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            355789999999999888888       5555544446677665555554   44443332 22221  21121     1


Q ss_pred             CCcHHHHHHH----HHHHHHHHHHHHHHHHHhhccChhhHhH---hh-hhhHHHHHHHHHHHhhccccccccccccchhh
Q 018400           70 QLTFSILCSF----FLLSVFGCSSQIFSFVGIQYSSPTLSTA---ML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLG  141 (356)
Q Consensus        70 ~~~~~~~~~~----~~~g~~~~~~~~~~~~al~~~~~~~a~~---l~-~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g  141 (356)
                      +-+++.+.+-    .+.|++-++.+.++..|-+..+.+.+..   +. ++.-++..+-+. ++||+-+-.+|+-.--++|
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            1122233444    6666666888999999999887666655   65 444455555555 6999988322233335788


Q ss_pred             HHHHhhhhhhhe
Q 018400          142 TFASIGGAFVVT  153 (356)
Q Consensus       142 ~~l~~~Gv~lv~  153 (356)
                      +++.++|+.++.
T Consensus       329 ~vliI~g~~lig  340 (345)
T PRK13499        329 CVVIILAANIVG  340 (345)
T ss_pred             HHHHHHHHHHHh
Confidence            888888888875

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.25  E-value=0.014  Score=45.58  Aligned_cols=109  Identities=10%  Similarity=0.038  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHh
Q 018400          190 AEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTW  269 (356)
Q Consensus       190 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  269 (356)
                      +-+++|+..+.+.||..+..+ +..-.. +.......     .+.             .|-..  ..+.....+-.+|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll~-------------n~~y~--ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LLL-------------NPKYI--IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HHH-------------hHHHH--HHHHHHHHHHHHHHH
Confidence            346789999999999887754 222211 11111111     111             11111  123334456677888


Q ss_pred             hhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400          270 CLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV  320 (356)
Q Consensus       270 al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~  320 (356)
                      .+++.+.+.+.++. .+.-+++++.++++.+|..+...++|+.++++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999994 9999999999998777777888999999999998763

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.12  E-value=0.11  Score=42.62  Aligned_cols=132  Identities=8%  Similarity=0.009  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           14 SVGMVIVLLAQVSNMEVIKAAMSKGI-NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        14 ~~~~ll~~~~~g~~~~~~k~~~~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      ++..+++..+-.....+.-...+ +. +|+.-.+..+..+.+++..+.++..++......++.-++.+..|++|..+-..
T Consensus         7 ll~~i~aG~~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~   85 (150)
T COG3238           7 LLFAILAGALLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTS   85 (150)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhh
Confidence            34444444444444444433333 33 58899999999988888887776433222222234344556667888666666


Q ss_pred             HHHHhhccChhhHhHh-hhhhHHHHHHHHHHHh----hccccccccccccchhhHHHHhhhhhhh
Q 018400           93 SFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFR----LEKLNWENKSSQAKSLGTFASIGGAFVV  152 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l----~e~~~~~~~~~~~~~~g~~l~~~Gv~lv  152 (356)
                      ........+++....+ ..-+-+...++..+=+    +.++++.      +++|+++.++|+.++
T Consensus        86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~  144 (150)
T COG3238          86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA  144 (150)
T ss_pred             hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence            6667777776665554 4445555555554433    5778888      999999999995554

>TIGR00803 nst UDP-galactose transporter

Probab=96.09  E-value=0.042  Score=48.58  Aligned_cols=64  Identities=11%  Similarity=0.108  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400           82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV  151 (356)
Q Consensus        82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l  151 (356)
                      ..+.......|..+.++|.++..-+....+.++++.+++.++++|+++..      ++.|..+.+.|+.+
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l  221 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence            33444777788899999999999999999999999999999999999999      99999999888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.89  E-value=0.19  Score=45.28  Aligned_cols=186  Identities=11%  Similarity=0.004  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF   92 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   92 (356)
                      |+++.+++.+++|++++-.|..-  .-|++.+-++-.....+.-+.+..+.+   .|++    ....++.|.+.+.++.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~--~gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~f----~p~amlgG~lW~~gN~~   71 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD--TGDGFFFQWVMCSGIFLVGLVVNLILG---FPPF----YPWAMLGGALWATGNIL   71 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc--CCCcHHHHHHHHHHHHHHHHHHHHhcC---CCcc----eeHHHhhhhhhhcCcee
Confidence            57888999999999999999874  357776666555444443333333332   2332    33556667777999999


Q ss_pred             HHHHhhccChhhHhHhhhhhHHHHHHH-HHH-HhhccccccccccccchhhHHHHhhhhhhheeccCCC-CccC------
Q 018400           93 SFVGIQYSSPTLSTAMLNLIPAFTFVL-AII-FRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPP-LIGE------  163 (356)
Q Consensus        93 ~~~al~~~~~~~a~~l~~~~Pv~~~ll-s~~-~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~-~~~~------  163 (356)
                      ..-.++..+.+....+-++.-+.+.-. +++ +++++.... +...-..+|++++++|..+..+-+.+. ....      
T Consensus        72 ~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~  150 (254)
T PF07857_consen   72 VVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETP  150 (254)
T ss_pred             ehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCccccccccc
Confidence            999999999999988877655444433 333 333322211 111226889999999988886533322 0000      


Q ss_pred             -C-CCCC---CC---CccCCC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400          164 -L-SHSG---SP---RRLLLS-----PQLSWILGGFFLAAEAFMNSAWFILQALILRK  208 (356)
Q Consensus       164 -~-~~~~---~~---~~~~~~-----~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~  208 (356)
                       . ++..   ++   ++.++.     .......|..+++.+++.|+...+=.....++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  151 LSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             cccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence             0 1000   11   001111     11246778888888888888766555544333

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.77  E-value=0.0046  Score=56.49  Aligned_cols=129  Identities=12%  Similarity=0.160  Sum_probs=96.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHH
Q 018400          178 QLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAV  257 (356)
Q Consensus       178 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  257 (356)
                      ...+..|.++++.+.+..+...++.||..++.. .                 ... ..+ ..+....  .+  ...+.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~-----------------~~~-ra~-~gg~~yl--~~--~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A-----------------SGL-RAG-EGGYGYL--KE--PLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h-----------------hcc-ccc-CCCcchh--hh--HHHHHHH
Confidence            345678999999999999999999998877753 1                 000 111 1111111  11  2224677


Q ss_pred             HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccccccc
Q 018400          258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKT  330 (356)
Q Consensus       258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~  330 (356)
                      +..+++-...+.+....|++.++++..+..+..++++..+++|+++..-.+||++.++|.........++++.
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            7777888888888999999999999999999999999999999999999999999999988876654444433

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.73  E-value=0.37  Score=44.99  Aligned_cols=140  Identities=14%  Similarity=0.074  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHhcC----C-Cccc---ccchhhHHH
Q 018400          183 LGGFFLAAEAFMNSAWFILQALILRKFA---AVLIIMFYLFFFNTILSTAFALIVVSE----P-SDWK---LGLDIGLVA  251 (356)
Q Consensus       183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~----~-~~~~---~~~~~~~~~  251 (356)
                      .-.+..+...+-++......|...++..   .+.+..+..-++-.+++....+.....    . ...+   ...+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            4456666677777777777776544431   267777777888887777776644311    0 0111   111111222


Q ss_pred             HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      +..-++ ...+-..+++.++++.++++..+...+....+.++..++++++.+..||...++..+|+.+....
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            222222 33444458889999999999999999999999999999999999999999999999999998743

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.55  E-value=0.18  Score=45.97  Aligned_cols=139  Identities=16%  Similarity=0.178  Sum_probs=109.7

Q ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCCCC-----CCcHHHHHHHHH
Q 018400            8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSERP-----QLTFSILCSFFL   81 (356)
Q Consensus         8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~   81 (356)
                      .+...|+.++....++=|++.......... .++++.+++.-.+..++.-... .+.....++     +.++..++.+++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHH
Confidence            345678887777777778888877777653 4889999888888877665543 222222222     225567888899


Q ss_pred             HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ...++..+|.+.|.-++.-++-.-+.+..+==++..+++.+.++.++++.      ||+|+.+.+.|+.+=.
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI  312 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence            99999999999999999998888889999999999999999999999999      9999999888887654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.21  E-value=0.11  Score=46.82  Aligned_cols=127  Identities=13%  Similarity=0.080  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC-Ccccccchhh-----HHHHHHHHH
Q 018400          184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDIG-----LVAVLYSAV  257 (356)
Q Consensus       184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~-----~~~l~~~g~  257 (356)
                      |.+.+++|+++|+-..+=.||....  |++..-.++.....+....+.++.+.+. .+|......-     ...+-..--
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~   78 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT   78 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence            4567788899999888888876433  6877766666666666665555443321 1111100000     001111111


Q ss_pred             HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHH-HhcCcc-----cchhhhhHHHHHHhhhhheeccccc
Q 018400          258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVV-IVGDAF-----CLGSLIGAMIIVAGFYAVMWGKSKE  327 (356)
Q Consensus       258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~-~~ge~~-----~~~~~iG~~li~~g~~l~~~~~~~~  327 (356)
                      ++-++++.+|.               ..+.+.+-..+-+ +||++.     +..-++|.+++++|..++...|.+.
T Consensus        79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            12234444442               2333444444432 455432     4668899999999999888766554

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.03  E-value=0.27  Score=45.24  Aligned_cols=138  Identities=17%  Similarity=0.234  Sum_probs=107.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCC-cHHHHHHHHHHH
Q 018400           11 ALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSE-----RPQL-TFSILCSFFLLS   83 (356)
Q Consensus        11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~-~~~~~~~~~~~g   83 (356)
                      ..||.++....+.-+...+..|+..+. +.+-+.++++..+.+.+.+....++.+...     .+.. +...+....+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            347888888888888888999988763 477888999999998888777665544311     1111 224466777788


Q ss_pred             HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      +++..-+++.++..+..++...++.....-..+.+...++.+++.++.      ...|+.++++|.++-.+
T Consensus       236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence            888888999999999999988888885666666666677888999999      99999999999988753

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.77  E-value=0.15  Score=44.34  Aligned_cols=136  Identities=14%  Similarity=0.152  Sum_probs=105.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCCC----CCCcHHHHHHHHHHHHHH
Q 018400           12 LPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSER----PQLTFSILCSFFLLSVFG   86 (356)
Q Consensus        12 ~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   86 (356)
                      .||+++....+--+..-...|...+. ...-+..+++..+++..++..+.++.+.+..    ..++...+...+..|++.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            46666666666555555556655431 4567788999999999999888777665322    234555667778888888


Q ss_pred             HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ..-.+|.-|.++-++.+.-+.+-.+.-.-..+.+.++++|+.++.      .+.++.++++..++-.
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa  295 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA  295 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence            777788899999999999999999888888899999999999999      9999999988777654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.30  E-value=0.27  Score=43.18  Aligned_cols=134  Identities=13%  Similarity=0.142  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHhccCCCC-----CCcHHHHHHHHHHHHHH
Q 018400           13 PSVGMVIVLLAQVSNMEVIKAAMSKG-INKYVIIVYSDALSSLFFLFCSFLFHRSERP-----QLTFSILCSFFLLSVFG   86 (356)
Q Consensus        13 ~~~~~ll~~~~~g~~~~~~k~~~~~~-~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~   86 (356)
                      |-+++++....=|.+.......-.++ -+.-.+.++-.+.+.+.+..-..+.+ +.|.     ......++.+.+.++.+
T Consensus       173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG-ElweF~yF~~RhP~~~~~l~l~ai~s  251 (337)
T KOG1580|consen  173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG-ELWEFFYFVQRHPYVFWDLTLLAIAS  251 (337)
T ss_pred             HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh-hHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            44555555555555555544333211 22334444555555544433222221 1110     11225677888889999


Q ss_pred             HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ++++.+.|.-+.+-+|-.-+++..+--+||.+.+.++++.+++.+      ||+|..+.+.|...=.
T Consensus       252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV  312 (337)
T ss_pred             HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence            999999999999999999999999999999999999999999999      9999999988866543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.34  E-value=0.049  Score=46.42  Aligned_cols=64  Identities=14%  Similarity=0.267  Sum_probs=58.6

Q ss_pred             HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      .+.++|..++++++++.++.+....-.+..+++++++||++...+++..++-+.|+.+..+.+.
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            3567899999999999999999999999999999999999999999999999999988876544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.27  E-value=1.5  Score=41.00  Aligned_cols=143  Identities=14%  Similarity=0.091  Sum_probs=85.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcC-CCc-ccccchhhHHHHHHHHH
Q 018400          180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSE-PSD-WKLGLDIGLVAVLYSAV  257 (356)
Q Consensus       180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~g~  257 (356)
                      .-..|.++..+++++-+.+.+=.||. |+.+ -...=..+.+++-++.-.+.....-| ..+ ....+...+......|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            34679999999999999988888886 5553 55555555555555554443322221 111 11112223444445555


Q ss_pred             HhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcC-------cccchhhhhHHHHHHhhhhheeccc
Q 018400          258 IGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGD-------AFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       258 ~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge-------~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                       -=+++-..|-.+.|+.+.+.. ++...+.-+++.++--++.|+       +-....++|..+.++|+.+..+.-.
T Consensus        82 -lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   82 -LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             -HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence             344566677778888877654 344445555555555554332       2234678999999999999876533

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.49  E-value=7.9  Score=29.64  Aligned_cols=111  Identities=17%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCC------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHH
Q 018400           16 GMVIVLLAQVSNMEVIKAAMSKGIN------KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSS   89 (356)
Q Consensus        16 ~~ll~~~~~g~~~~~~k~~~~~~~~------~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   89 (356)
                      .++....+||.+.++.|.... +.+      .....+.|-.....                .+++.+..    -+++-.+
T Consensus         7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iP----FllNqcg   65 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIP----FLLNQCG   65 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHHHHH----HHHHHhh
Confidence            466778999999999998865 332      22222233222110                11122222    2233455


Q ss_pred             HHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400           90 QIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT  153 (356)
Q Consensus        90 ~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~  153 (356)
                      ..+||.-+++.+-+.+..+.+ ++-.|+.+.+..+-.|....+      .++|..+.++|+.+++
T Consensus        66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhee
Confidence            677889999999999988866 577777777775555555555      8899999999987764

>PRK02237 hypothetical protein; Provisional

Probab=88.37  E-value=1.7  Score=33.43  Aligned_cols=46  Identities=20%  Similarity=0.193  Sum_probs=40.7

Q ss_pred             eeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          279 VSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       279 ~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      .+.+...-.+.++++++.+-|++|+...++|..++++|+.++.+..
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            3677888899999999999999999999999999999998876554

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=86.57  E-value=8.7  Score=35.44  Aligned_cols=121  Identities=12%  Similarity=0.223  Sum_probs=83.0

Q ss_pred             HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccchhhHH-HHHHHHHHhhHHHHhHHHhhhccCCCceee
Q 018400          203 ALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK-LGLDIGLV-AVLYSAVIGTGFRVGLCTWCLSRTGPLYVS  280 (356)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~-~l~~~g~~~~~~~~~~~~~al~~~~~~~~s  280 (356)
                      +...++.+=|+.++.+++.+-..+....-...+...+.-. ..+..+.. .++-.|+ ++++=.++-++++++++.+..+
T Consensus        36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYT  114 (349)
T KOG1443|consen   36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYT  114 (349)
T ss_pred             hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeee
Confidence            3333344446777777766655555444443333221111 11111222 2223454 7788889999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400          281 MFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK  324 (356)
Q Consensus       281 ~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  324 (356)
                      +.....++|-.+++.++-=|++.+....-..+|-+|+.+..+..
T Consensus       115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            99999999999999998889999998888888889998887644

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=84.30  E-value=2.1  Score=32.64  Aligned_cols=58  Identities=16%  Similarity=0.210  Sum_probs=45.3

Q ss_pred             HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400          264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM  321 (356)
Q Consensus       264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~  321 (356)
                      -.+|++-+++.+.+.+.++. .+...++.+.+..+-.|......++|..+++.|+++..
T Consensus        66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            45677778999988887765 45788899999986444556778899999999998753

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=83.58  E-value=3.1  Score=37.64  Aligned_cols=139  Identities=19%  Similarity=0.133  Sum_probs=93.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhcc----CCCCCC-cHHHHHHHHHHH
Q 018400           10 AALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHR----SERPQL-TFSILCSFFLLS   83 (356)
Q Consensus        10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g   83 (356)
                      ...|.++.+++.+.-+.+.+..|..... +-.-+.+.++-...+.++++|...+.+.    ...++. ..+-|....+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            4679999999999999999999977652 1235677888889999999998777653    122343 445565666667


Q ss_pred             HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ++|+..++--.+=++.++|-.--+=..--...=.+++..+++|..+..      .|.+-++.+.|-..-+.
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHH
Confidence            777444443444445555432211111222333567888999999999      89998888888777654

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.14  E-value=4.2  Score=31.20  Aligned_cols=46  Identities=20%  Similarity=0.236  Sum_probs=40.9

Q ss_pred             eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400          280 SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS  325 (356)
Q Consensus       280 s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  325 (356)
                      +.+...-.+.+.++++.+=|++|+...++|..++++|+.+..+..|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            6677888999999999999999999999999999999988876543

; GO: 0016020 membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=81.16  E-value=10  Score=34.36  Aligned_cols=136  Identities=15%  Similarity=0.154  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCC------CcHHHHHHHHHHHH
Q 018400           12 LPSVGMVIVLLAQVSNMEVIKAAMS-KGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQ------LTFSILCSFFLLSV   84 (356)
Q Consensus        12 ~~~~~~ll~~~~~g~~~~~~k~~~~-~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~g~   84 (356)
                      .|+...-.+.+.=+...-+...++. +.-+...++++.+.++.++++........ ..+.      -+.|..-+.++.++
T Consensus       190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHH
Confidence            3444333333333444444444443 23566788888888888777665544332 2111      13456667777777


Q ss_pred             HHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           85 FGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        85 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      .+.+++.+...=++.-++..+..+...--..|.++|.+++..+++..      ...+..+.+.|+.+=..
T Consensus       269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y  332 (367)
T KOG1582|consen  269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY  332 (367)
T ss_pred             HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence            77777776666667778888888888888999999999999999999      88999999999988654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=81.10  E-value=1.5  Score=39.75  Aligned_cols=65  Identities=14%  Similarity=0.100  Sum_probs=57.7

Q ss_pred             hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      +-..+-.+++.++..++++...++.....+|+.+++.-+++.+++..||+|...+.+|+..+-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            55566677888888999999999999999999999999999999999999999999998877543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	356
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.99
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.71
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.38
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.34

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.99  E-value=2.8e-10  Score=91.42  Aligned_cols=70  Identities=19%  Similarity=0.160  Sum_probs=54.3

Q ss_pred             HHHHHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          254 YSAVIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       254 ~~g~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      ..++++++++|.+|.+++++.|++.+.++ ..+.|+++.+++++++||++++.+++|+.+|++|+++....
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35667889999999999999999999999 89999999999999999999999999999999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.71  E-value=8.7e-08  Score=74.14  Aligned_cols=69  Identities=19%  Similarity=0.168  Sum_probs=63.9

Q ss_pred             HHHHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400          255 SAVIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG  323 (356)
Q Consensus       255 ~g~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  323 (356)
                      .++++.++++.++.+++|+.|.+.+.++ ..+.|+++.+++++++||+++..+++|..+|++|+++....
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            5556788999999999999999999888 89999999999999999999999999999999999998643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.38  E-value=1e-06  Score=70.64  Aligned_cols=68  Identities=13%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             HHHHHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           81 LLSVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        81 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      +.+++. ++++.++..++++.+++.+..+ ..+.|+++.++++++++|++++.      +++|+++.++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            455555 8999999999999999999888 89999999999999999999999      99999999999999863

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.34  E-value=3.3e-06  Score=65.17  Aligned_cols=68  Identities=13%  Similarity=0.219  Sum_probs=62.1

Q ss_pred             HHHHHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400           81 LLSVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF  154 (356)
Q Consensus        81 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~  154 (356)
                      ..+++. ..+..++..++++.|.+.+..+ ..+.|+++.+++++++||++++.      |++|+.+.++|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            355555 8899999999999999999888 79999999999999999999999      99999999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00