Citrus Sinensis ID: 018442

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQITSAMIRTPLFGS
cccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEccccHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHccccccccccccccccEEcccEEEccccccHHHHHHHHHHHHHccEEEEEcccccccccccccHHHHHcccEEEEEccccccccccccEEEEccHHHHHHHHHHHccccccccccccccEEccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEcccccc
ccccHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHccccccccccHHHHcccccccccccccHHHccccHHHHHHHHHHHcccEEEEEEcccccHHHHccccHHHEEEEcccHEEHHHHHcccEEcHHHHHHHccccccccccccccccccccccEEEccccccHHHHHHHHHHHHcccEEEEEcccEEEEccccccHHHHccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHHccccccccccccccEEcccccccccccccccEEEEHHHccccccccccEEEEccccccccccccHHHccccccEEEEccccccEEEcccccc
mslgyaeklsyredvgsvgmseifdpphlLQQKIAELAVMIKKSKHLVAFtgagistscgipdfrgpkgvwtlqregkgvpeaslpfdrampsITHMALVELEKAGILKFVISqnvdslhlrsgipreklaelhgnsfreicpscgveyMRDFEIetigmkktprrcsdvkcgsrlkdtvldwedalppvemnpaeencrMADVVLCLgtslqitpacnlplkslrgggKIVIVNLqqtpkdkkaslvVHAPVDKVIAGVMRHLnlwippyvrvdlfqinldqysrpsrsdkYVKWALRVgsvhrpkapspfvqsvevsfsdrpdlKTAILNKQPFKLKRRKQITSAMIRTPLFGS
mslgyaekLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAgistscgipdfRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEietigmkktprrcsdvkcgsrlkdtvldwedalppVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLqqtpkdkkaslvVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDqysrpsrsdkyVKWALRVGsvhrpkapspfvqsvevsfsdrpdlktailnkqpfklkrrkqitsamirtplfgs
MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQITSAMIRTPLFGS
***************GSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSV*****************************************************
***GYAE**S**************DPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLF*********************************************************************AMIRTPLFG*
MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQITSAMIRTPLFGS
*****AEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQITSAMIRTPLFGS
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQITSAMIRTPLFGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
Q9FE17 473 NAD-dependent protein dea yes no 0.952 0.716 0.736 1e-151
B8ARK7 484 NAD-dependent protein dea N/A no 0.969 0.712 0.722 1e-147
P59941334 NAD-dependent protein dea yes no 0.904 0.964 0.457 3e-76
Q8N6T7355 NAD-dependent protein dea yes no 0.758 0.760 0.512 1e-75
Q9VH08317 NAD-dependent protein dea yes no 0.825 0.927 0.431 2e-65
Q0P595400 NAD-dependent protein dea no no 0.691 0.615 0.415 3e-49
Q9NRC8400 NAD-dependent protein dea no no 0.691 0.615 0.415 6e-49
B2RZ55402 NAD-dependent protein dea no no 0.691 0.611 0.422 8e-49
Q8BKJ9402 NAD-dependent protein dea no no 0.691 0.611 0.418 1e-48
Q9VAQ1 771 NAD-dependent protein dea no no 0.688 0.317 0.4 2e-47
>sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  534 bits (1376), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/341 (73%), Positives = 295/341 (86%), Gaps = 2/341 (0%)

Query: 1   MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCG 60
           MSLGYAEKLS+ EDVG VGM+E FDP HLLQ KI ELA +I+KSKHLV FTGAGISTSCG
Sbjct: 1   MSLGYAEKLSFIEDVGQVGMAEFFDPSHLLQCKIEELAKLIQKSKHLVVFTGAGISTSCG 60

Query: 61  IPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLH 120
           IPDFRGPKG+WTLQREGK +P+ASLPF RAMPS+THMALVELE+AGILKFVISQNVD LH
Sbjct: 61  IPDFRGPKGIWTLQREGKDLPKASLPFHRAMPSMTHMALVELERAGILKFVISQNVDGLH 120

Query: 121 LRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTV 180
           LRSGIPREKL+ELHG+SF E+CPSCG EY+RDFE+ETIG+K+T R+CS  KCG++LKDTV
Sbjct: 121 LRSGIPREKLSELHGDSFMEMCPSCGAEYLRDFEVETIGLKETSRKCSVEKCGAKLKDTV 180

Query: 181 LDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP 240
           LDWEDALPP E++PAE++C+ AD+VLCLGTSLQITPACNLPLK L+GGGKIVIVNLQ+TP
Sbjct: 181 LDWEDALPPKEIDPAEKHCKKADLVLCLGTSLQITPACNLPLKCLKGGGKIVIVNLQKTP 240

Query: 241 KDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRV 300
           KDKKA++V+H  VDKV+AGVM  LN+ IPPYVR+DLFQI L Q    S   +++ W LRV
Sbjct: 241 KDKKANVVIHGLVDKVVAGVMESLNMKIPPYVRIDLFQIILTQ--SISGDQRFINWTLRV 298

Query: 301 GSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRR 341
            SVH   +  PF++S+EVSFSD  + K A+L+KQPF +KRR
Sbjct: 299 ASVHGLTSQLPFIKSIEVSFSDNHNYKDAVLDKQPFLMKRR 339
NAD-dependent protein deacetylase. Has deacetylase activity towards H3K9Ac. May have a function in the safeguard against genome instabiliy and DNA damage to ensure plant cell growth.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|P59941|SIR6_MOUSE NAD-dependent protein deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1 Back     alignment and function description
>sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 Back     alignment and function description
>sp|Q9VH08|SIR6_DROME NAD-dependent protein deacetylase Sirt6 OS=Drosophila melanogaster GN=Sirt6 PE=2 SV=1 Back     alignment and function description
>sp|Q0P595|SIR7_BOVIN NAD-dependent protein deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRC8|SIR7_HUMAN NAD-dependent protein deacetylase sirtuin-7 OS=Homo sapiens GN=SIRT7 PE=1 SV=1 Back     alignment and function description
>sp|B2RZ55|SIR7_RAT NAD-dependent protein deacetylase sirtuin-7 OS=Rattus norvegicus GN=Sirt7 PE=2 SV=1 Back     alignment and function description
>sp|Q8BKJ9|SIR7_MOUSE NAD-dependent protein deacetylase sirtuin-7 OS=Mus musculus GN=Sirt7 PE=1 SV=2 Back     alignment and function description
>sp|Q9VAQ1|SIR7_DROME NAD-dependent protein deacetylase Sirt7 OS=Drosophila melanogaster GN=Sirt7 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
449462391 472 PREDICTED: NAD-dependent protein deacety 0.952 0.718 0.768 1e-156
356566429 479 PREDICTED: NAD-dependent deacetylase sir 0.971 0.722 0.758 1e-155
225461927 467 PREDICTED: NAD-dependent deacetylase sir 0.952 0.725 0.774 1e-154
224056465 464 histone deacetylase [Populus trichocarpa 0.952 0.730 0.774 1e-154
359466799 467 sirtuin 1 [Vitis vinifera] 0.952 0.725 0.771 1e-154
255563480 466 chromatin regulatory protein sir2, putat 0.969 0.740 0.742 1e-151
297793049 473 hypothetical protein ARALYDRAFT_495661 [ 0.952 0.716 0.741 1e-151
297790063 473 hypothetical protein ARALYDRAFT_497237 [ 0.952 0.716 0.739 1e-150
15240574 473 sirtuin 1 [Arabidopsis thaliana] gi|7526 0.952 0.716 0.736 1e-149
31711700 473 At5g55760 [Arabidopsis thaliana] gi|1107 0.952 0.716 0.733 1e-148
>gi|449462391|ref|XP_004148924.1| PREDICTED: NAD-dependent protein deacetylase SRT1-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/341 (76%), Positives = 293/341 (85%), Gaps = 2/341 (0%)

Query: 1   MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCG 60
           MSLGYAEKLSY EDVG VGM+E FDPPH+L++KI  L +MI+KSKHLV FTGAGISTSCG
Sbjct: 1   MSLGYAEKLSYIEDVGKVGMTEHFDPPHVLEEKIERLTMMIQKSKHLVVFTGAGISTSCG 60

Query: 61  IPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLH 120
           IPDFRGPKG+WTLQREGK +PEASLPF RAMPSITHMALVELEKAGILKF+ISQN+D LH
Sbjct: 61  IPDFRGPKGIWTLQREGKALPEASLPFHRAMPSITHMALVELEKAGILKFIISQNIDGLH 120

Query: 121 LRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTV 180
           LRSGIPREKLAELHGNSF E CPSCG EY+RDFE+ETIG+K T RRCSD  CG++L+DTV
Sbjct: 121 LRSGIPREKLAELHGNSFMETCPSCGAEYLRDFEVETIGLKDTSRRCSDANCGAKLRDTV 180

Query: 181 LDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP 240
           LDWEDALPP EMNPAE +CRMAD+VLCLGTSLQITPACNLPLKSLRGGGKI+IVNLQ+TP
Sbjct: 181 LDWEDALPPKEMNPAERHCRMADIVLCLGTSLQITPACNLPLKSLRGGGKIIIVNLQKTP 240

Query: 241 KDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRV 300
           KDKKASLV+H  VDKVIAGVM  LN+ IPP+VR+DLFQI L Q    S   K+V W LR+
Sbjct: 241 KDKKASLVIHGRVDKVIAGVMEILNMQIPPFVRIDLFQIILSQ--GLSLDKKFVNWTLRI 298

Query: 301 GSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRR 341
            S+H  KAP PF++SVE+SF D  D K+  L  QPF LKRR
Sbjct: 299 LSIHGQKAPLPFIKSVEISFLDNQDYKSTTLQSQPFLLKRR 339

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356566429|ref|XP_003551434.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Glycine max] Back     alignment and taxonomy information
>gi|225461927|ref|XP_002265837.1| PREDICTED: NAD-dependent deacetylase sirtuin-6 [Vitis vinifera] gi|296089923|emb|CBI39742.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224056465|ref|XP_002298870.1| histone deacetylase [Populus trichocarpa] gi|222846128|gb|EEE83675.1| histone deacetylase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359466799|gb|AEV46830.1| sirtuin 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563480|ref|XP_002522742.1| chromatin regulatory protein sir2, putative [Ricinus communis] gi|223537980|gb|EEF39593.1| chromatin regulatory protein sir2, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297793049|ref|XP_002864409.1| hypothetical protein ARALYDRAFT_495661 [Arabidopsis lyrata subsp. lyrata] gi|297310244|gb|EFH40668.1| hypothetical protein ARALYDRAFT_495661 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297790063|ref|XP_002862943.1| hypothetical protein ARALYDRAFT_497237 [Arabidopsis lyrata subsp. lyrata] gi|297308724|gb|EFH39202.1| hypothetical protein ARALYDRAFT_497237 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15240574|ref|NP_200387.1| sirtuin 1 [Arabidopsis thaliana] gi|75262309|sp|Q9FE17.1|SIR1_ARATH RecName: Full=NAD-dependent protein deacetylase SRT1; AltName: Full=Regulatory protein SIR2 homolog 1; AltName: Full=SIR2-like protein 1 gi|12006420|gb|AAG44850.1|AF283757_1 sir2-like protein [Arabidopsis thaliana] gi|9758610|dbj|BAB09243.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] gi|332009294|gb|AED96677.1| sirtuin 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|31711700|gb|AAP68206.1| At5g55760 [Arabidopsis thaliana] gi|110743087|dbj|BAE99436.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2162112 473 SRT1 "AT5G55760" [Arabidopsis 0.952 0.716 0.736 3.2e-136
UNIPROTKB|F1P0C4357 SIRT6 "Uncharacterized protein 0.758 0.756 0.523 5.9e-73
RGD|1305216330 Sirt6 "sirtuin 6" [Rattus norv 0.865 0.933 0.482 5.3e-72
MGI|MGI:1354161334 Sirt6 "sirtuin 6 (silent matin 0.865 0.922 0.473 6.1e-71
UNIPROTKB|A5D7K6359 SIRT6 "SIRT6 protein" [Bos tau 0.803 0.796 0.494 3.3e-70
UNIPROTKB|E2QXD9361 SIRT6 "Uncharacterized protein 0.803 0.792 0.491 4.3e-70
UNIPROTKB|Q8N6T7355 SIRT6 "NAD-dependent protein d 0.803 0.805 0.494 4.3e-70
UNIPROTKB|F1S7P1359 SIRT6 "Uncharacterized protein 0.803 0.796 0.470 1.5e-65
ZFIN|ZDB-GENE-031007-2354 sirt6 "sirtuin (silent mating 0.758 0.762 0.483 1.5e-65
UNIPROTKB|F1S7M5328 SIRT6 "Uncharacterized protein 0.758 0.823 0.483 4.1e-65
TAIR|locus:2162112 SRT1 "AT5G55760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
 Identities = 251/341 (73%), Positives = 295/341 (86%)

Query:     1 MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCG 60
             MSLGYAEKLS+ EDVG VGM+E FDP HLLQ KI ELA +I+KSKHLV FTGAGISTSCG
Sbjct:     1 MSLGYAEKLSFIEDVGQVGMAEFFDPSHLLQCKIEELAKLIQKSKHLVVFTGAGISTSCG 60

Query:    61 IPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLH 120
             IPDFRGPKG+WTLQREGK +P+ASLPF RAMPS+THMALVELE+AGILKFVISQNVD LH
Sbjct:    61 IPDFRGPKGIWTLQREGKDLPKASLPFHRAMPSMTHMALVELERAGILKFVISQNVDGLH 120

Query:   121 LRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTV 180
             LRSGIPREKL+ELHG+SF E+CPSCG EY+RDFE+ETIG+K+T R+CS  KCG++LKDTV
Sbjct:   121 LRSGIPREKLSELHGDSFMEMCPSCGAEYLRDFEVETIGLKETSRKCSVEKCGAKLKDTV 180

Query:   181 LDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP 240
             LDWEDALPP E++PAE++C+ AD+VLCLGTSLQITPACNLPLK L+GGGKIVIVNLQ+TP
Sbjct:   181 LDWEDALPPKEIDPAEKHCKKADLVLCLGTSLQITPACNLPLKCLKGGGKIVIVNLQKTP 240

Query:   241 KDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDKYVKWALRV 300
             KDKKA++V+H  VDKV+AGVM  LN+ IPPYVR+DLFQI L Q    S   +++ W LRV
Sbjct:   241 KDKKANVVIHGLVDKVVAGVMESLNMKIPPYVRIDLFQIILTQSI--SGDQRFINWTLRV 298

Query:   301 GSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRR 341
              SVH   +  PF++S+EVSFSD  + K A+L+KQPF +KRR
Sbjct:   299 ASVHGLTSQLPFIKSIEVSFSDNHNYKDAVLDKQPFLMKRR 339
GO:0003677 "DNA binding" evidence=ISS
GO:0005677 "chromatin silencing complex" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006342 "chromatin silencing" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS
GO:0006476 "protein deacetylation" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0070403 "NAD+ binding" evidence=IEA
UNIPROTKB|F1P0C4 SIRT6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1305216 Sirt6 "sirtuin 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1354161 Sirt6 "sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7K6 SIRT6 "SIRT6 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXD9 SIRT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N6T7 SIRT6 "NAD-dependent protein deacetylase sirtuin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7P1 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031007-2 sirt6 "sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7M5 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B8ARK7SIR1_ORYSI3, ., 5, ., 1, ., -0.72280.96910.7128N/Ano
P59941SIR6_MOUSE3, ., 5, ., 1, ., -0.45790.90440.9640yesno
Q9VH08SIR6_DROME3, ., 5, ., 1, ., -0.43170.82580.9274yesno
Q8N6T7SIR6_HUMAN3, ., 5, ., 1, ., -0.51260.75840.7605yesno
Q9FE17SIR1_ARATH3, ., 5, ., 1, ., -0.73600.95220.7167yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033378001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (467 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
cd01410206 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic 1e-124
cd01407218 cd01407, SIR2-fam, SIR2 family of proteins include 2e-83
cd00296222 cd00296, SIR2, SIR2 superfamily of proteins includ 2e-71
PRK00481242 PRK00481, PRK00481, NAD-dependent deacetylase; Pro 8e-58
COG0846250 COG0846, SIR2, NAD-dependent protein deacetylases, 1e-53
cd01413222 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo 3e-52
PRK14138244 PRK14138, PRK14138, NAD-dependent deacetylase; Pro 3e-42
cd01412224 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti 4e-41
pfam02146177 pfam02146, SIR2, Sir2 family 2e-39
cd01411225 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic 5e-37
PTZ00409271 PTZ00409, PTZ00409, Sir2 (Silent Information Regul 8e-35
cd01409260 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic 2e-32
cd01408235 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w 4e-25
PTZ00408242 PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro 3e-22
PRK05333285 PRK05333, PRK05333, NAD-dependent deacetylase; Pro 1e-18
PTZ00410349 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona 3e-14
>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
 Score =  355 bits (913), Expect = e-124
 Identities = 136/208 (65%), Positives = 156/208 (75%), Gaps = 2/208 (0%)

Query: 45  KHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEK 104
           KHLV FTGAGISTS GIPDFRGP GVWTL  E KG    S  F RA P++THMALVELE+
Sbjct: 1   KHLVVFTGAGISTSAGIPDFRGPNGVWTLLPEDKGRRRFSWRFRRAEPTLTHMALVELER 60

Query: 105 AGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTP 164
           AG+LKFVISQNVD LHLRSG+PREKL+ELHGN F E+C SCG EY+RD  +ET G K+T 
Sbjct: 61  AGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDKETG 120

Query: 165 RRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKS 224
           RRC    CG  LKDT++D+ + LPP     A      AD+ LCLGTSLQ+TPA NLPLK+
Sbjct: 121 RRCH--ACGGILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQVTPAANLPLKA 178

Query: 225 LRGGGKIVIVNLQQTPKDKKASLVVHAP 252
            R GG++VIVNLQ TPKDK A LV+H  
Sbjct: 179 ARAGGRLVIVNLQPTPKDKLADLVIHGD 206

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206
>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>gnl|CDD|216902 pfam02146, SIR2, Sir2 family Back     alignment and domain information
>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
KOG1905353 consensus Class IV sirtuins (SIR2 family) [Chromat 100.0
PRK14138244 NAD-dependent deacetylase; Provisional 100.0
cd01410206 SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla 100.0
cd01409260 SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla 100.0
PTZ00409271 Sir2 (Silent Information Regulator) protein; Provi 100.0
PRK05333285 NAD-dependent deacetylase; Provisional 100.0
COG0846250 SIR2 NAD-dependent protein deacetylases, SIR2 fami 100.0
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 100.0
PRK00481242 NAD-dependent deacetylase; Provisional 100.0
cd01413222 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group 100.0
PTZ00410349 NAD-dependent SIR2; Provisional 100.0
PTZ00408242 NAD-dependent deacetylase; Provisional 100.0
cd01411225 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo 100.0
cd01412224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 100.0
cd01407218 SIR2-fam SIR2 family of proteins includes silent i 100.0
KOG2682314 consensus NAD-dependent histone deacetylases and c 100.0
cd00296222 SIR2 SIR2 superfamily of proteins includes silent 100.0
KOG2684412 consensus Sirtuin 5 and related class III sirtuins 100.0
KOG2683305 consensus Sirtuin 4 and related class II sirtuins 100.0
PF02146178 SIR2: Sir2 family; InterPro: IPR003000 These seque 100.0
cd01406242 SIR2-like Sir2-like: Prokaryotic group of uncharac 98.62
COG0028 550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 96.52
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 96.49
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 94.43
PRK08979 572 acetolactate synthase 3 catalytic subunit; Validat 94.41
PRK06882 574 acetolactate synthase 3 catalytic subunit; Validat 94.23
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 94.22
TIGR01504 588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 94.19
PRK08322 547 acetolactate synthase; Reviewed 94.19
PRK07524 535 hypothetical protein; Provisional 94.18
PRK07418 616 acetolactate synthase 3 catalytic subunit; Reviewe 94.03
CHL00099 585 ilvB acetohydroxyacid synthase large subunit 94.0
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 93.94
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 93.87
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 93.8
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 93.69
PLN02470 585 acetolactate synthase 93.65
PRK06154 565 hypothetical protein; Provisional 93.64
PRK06725 570 acetolactate synthase 3 catalytic subunit; Validat 93.58
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 93.5
PRK05858 542 hypothetical protein; Provisional 93.44
PRK11269 591 glyoxylate carboligase; Provisional 93.43
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 93.37
PRK08199 557 thiamine pyrophosphate protein; Validated 93.34
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 93.26
TIGR03254 554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 93.24
PRK06112 578 acetolactate synthase catalytic subunit; Validated 93.17
PF13289143 SIR2_2: SIR2-like domain 93.11
PRK08155 564 acetolactate synthase catalytic subunit; Validated 93.1
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 93.08
PRK06048 561 acetolactate synthase 3 catalytic subunit; Reviewe 92.88
PRK08327 569 acetolactate synthase catalytic subunit; Validated 92.73
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 92.73
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 92.7
TIGR03457 579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 92.67
PRK08266 542 hypothetical protein; Provisional 92.67
PRK09259 569 putative oxalyl-CoA decarboxylase; Validated 92.39
PRK08611 576 pyruvate oxidase; Provisional 92.39
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 92.34
PRK08273 597 thiamine pyrophosphate protein; Provisional 92.2
PRK08617 552 acetolactate synthase; Reviewed 91.94
PRK06546 578 pyruvate dehydrogenase; Provisional 91.89
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 91.71
TIGR00173432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 91.24
PRK07064 544 hypothetical protein; Provisional 90.8
TIGR02720 575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 90.41
PRK09124 574 pyruvate dehydrogenase; Provisional 90.19
KOG1185 571 consensus Thiamine pyrophosphate-requiring enzyme 88.87
PLN02573 578 pyruvate decarboxylase 88.29
COG3962 617 Acetolactate synthase [Amino acid transport and me 87.01
TIGR03393 539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 86.41
smart0083441 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C 86.15
PRK07092 530 benzoylformate decarboxylase; Reviewed 86.03
cd02750 461 MopB_Nitrate-R-NarG-like Respiratory nitrate reduc 85.99
PRK06457 549 pyruvate dehydrogenase; Provisional 85.57
cd02759 477 MopB_Acetylene-hydratase The MopB_Acetylene-hydrat 85.45
PLN00022356 electron transfer flavoprotein subunit alpha; Prov 84.55
COG2025313 FixB Electron transfer flavoprotein, alpha subunit 84.36
cd02766 501 MopB_3 The MopB_3 CD includes a group of related u 83.74
PRK07449 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 83.5
PRK03363313 fixB putative electron transfer flavoprotein FixB; 83.43
PF0972342 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134 83.06
PF0336684 YEATS: YEATS family; InterPro: IPR005033 Named the 81.82
cd02753 512 MopB_Formate-Dh-H Formate dehydrogenase H (Formate 81.26
PRK11916312 electron transfer flavoprotein subunit YdiR; Provi 80.69
cd02765 567 MopB_4 The MopB_4 CD includes a group of related u 80.16
cd02763 679 MopB_2 The MopB_2 CD includes a group of related u 80.04
>KOG1905 consensus Class IV sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-79  Score=573.35  Aligned_cols=326  Identities=51%  Similarity=0.827  Sum_probs=296.7

Q ss_pred             CcccccccCCCcccCCCCCCcccCCChhHHHHHHHHHHHHHHhCCcEEEEeCCCcCccCCCCCccCCCCccccccCCCCC
Q 018442            1 MSLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGV   80 (356)
Q Consensus         1 ~~~~ya~~l~~~~~~g~~~~~e~~~~~~~l~~~i~~la~~i~~ak~Ivv~TGAGISt~sGIPdFR~~~G~w~~~~~~~~~   80 (356)
                      ||+|||+|+|.|.++|++|++|.||++++++.++++||++|++|+++||+|||||||+||||||||++|+|++++.|+. 
T Consensus        12 ~~v~~~~~~s~~~~~~k~~~~e~~D~~e~l~~kv~elA~li~~sk~lvv~tGAGISTaa~IPDfRGp~GVWTL~~kG~~-   90 (353)
T KOG1905|consen   12 MSVNYAHGLSIRLEKGKQGRPEEFDPPEVLRTKVEELAQLIQQSKHLVVYTGAGISTAAGIPDFRGPQGVWTLQQKGKD-   90 (353)
T ss_pred             hhhhhhcccchhhhcccccCccccCCHHHHHHHHHHHHHHHhhCCcEEEEeCCccccccCCCCccCCCceeehhhcCcc-
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999999999986 


Q ss_pred             CccccccccCCCCHHHHHHHHHHHcCCceEEEeccccchHhhcCCCCCceeeccCCccccccCCCCCccchhhHHHhhcc
Q 018442           81 PEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGM  160 (356)
Q Consensus        81 pe~~~~f~~a~P~~~H~aL~~L~~~g~l~~viTQNIDgLh~rAG~~~~~v~elHG~~~~~~C~~C~~~y~~d~~~~~~~~  160 (356)
                       .....|..|+|+.+||+|.+|.+.|.+++||||||||||.|+|+|+++++|+|||++.++|.+|..+|.++..+.+++.
T Consensus        91 -~~~~df~~ArPt~THmai~~Lhr~gll~~viSQNvDGLhlrsGlPr~~LsElHGNmfiEvC~sC~~~yvr~~~v~t~gl  169 (353)
T KOG1905|consen   91 -KFGVDFSEARPTVTHMAIVALHRAGLLKHVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCRPEYVRDRVVDTVGL  169 (353)
T ss_pred             -ccCCchhhcCCcchHHHHHHHHHcchhhhhhhccccchhhccCCCHHHHHHHhcchHHHHhhhhcccceehhheeeccc
Confidence             5677899999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cCCCCcCCCCC------CCCccccceEecCCCCChhchHHHHHHhccCCEEEEEccCCCccccccccHHHhcCCCeEEEE
Q 018442          161 KKTPRRCSDVK------CGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV  234 (356)
Q Consensus       161 ~~~~p~C~~p~------Cgg~lrp~Vv~fgE~lp~~~~~~a~~~~~~aDLlLvlGTSl~V~P~~~lp~~a~~~g~~lV~I  234 (356)
                      +.+.+.|...+      |.|.|++.++.|++.+|...|+.|.++.++||++|++||||+|.|..++|..+.++|+++++|
T Consensus       170 ~at~R~ct~~k~~~~rscrg~l~d~~ldwe~~lpln~l~~a~~a~~~Ad~~lcLGTSLqI~p~g~lpl~~~k~g~K~~iv  249 (353)
T KOG1905|consen  170 KATGRHCTGRKCRKCRSCRGTLRDFGLDWEDELPLNDLDRATKAAKRADLILCLGTSLQILPKGNLPLKMKKRGGKIVIV  249 (353)
T ss_pred             ccccccccccccccccccccchhhccccccccCCchhhHHHHHHhhhcceEEEeccceEeeeCCCcchhHhccCceEEEE
Confidence            87766664333      456789999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCCCCccEEEEccHHHHHHHHHHHhccCCCCcccc-cceeeeecccCCCCCCCcceeeEEEeeccCCCCCCCCce
Q 018442          235 NLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRV-DLFQINLDQYSRPSRSDKYVKWALRVGSVHRPKAPSPFV  313 (356)
Q Consensus       235 N~~~t~~d~~~dl~I~g~~d~vl~~l~~~L~~~iP~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (356)
                      |+|+|++|+.+++.|+|++|.||..||+.||++||.|++. |.+.+.+..+  ..-....+.|.+...++++-..+.+|+
T Consensus       250 NlQ~T~hDk~A~l~Ihg~vd~Vm~~lm~~LgveIp~y~~~~d~~~~~~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (353)
T KOG1905|consen  250 NLQWTPHDKIANLKIHGKVDLVMASLMELLGVEIPAYDRLPDPIFILLTLS--RPGEEHTIPQPLLKNSVEETTKQEPFI  327 (353)
T ss_pred             eCccCcccchhheeehhhHHHHHHHHHHHhCCCCCcccCCCcccccccccC--CCCccccccccccccccccCCCCCccc
Confidence            9999999999999999999999999999999999999984 5444433322  112456677888899999977788999


Q ss_pred             eEEEeecCCCCchhhhccccCCceeee
Q 018442          314 QSVEVSFSDRPDLKTAILNKQPFKLKR  340 (356)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~f~~~~  340 (356)
                      +.+.    +      .++.+++|.-.+
T Consensus       328 ~~~~----s------pi~~~~~~~~~~  344 (353)
T KOG1905|consen  328 STIS----S------PILKGPRIRTPI  344 (353)
T ss_pred             cccc----c------ccccCCCCcCCc
Confidence            8887    1      378888887653

>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>PRK05333 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PTZ00410 NAD-dependent SIR2; Provisional Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>KOG2684 consensus Sirtuin 5 and related class III sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG2683 consensus Sirtuin 4 and related class II sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases Back     alignment and domain information
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PF13289 SIR2_2: SIR2-like domain Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>cd02750 MopB_Nitrate-R-NarG-like Respiratory nitrate reductase A (NarGHI), alpha chain (NarG) and related proteins Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>cd02759 MopB_Acetylene-hydratase The MopB_Acetylene-hydratase CD contains acetylene hydratase (Ahy) and other related proteins Back     alignment and domain information
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02766 MopB_3 The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria Back     alignment and domain information
>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein Back     alignment and domain information
>cd02753 MopB_Formate-Dh-H Formate dehydrogenase H (Formate-Dh-H) catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>cd02765 MopB_4 The MopB_4 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site Back     alignment and domain information
>cd02763 MopB_2 The MopB_2 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
3k35_A318 Crystal Structure Of Human Sirt6 Length = 318 2e-76
3pki_A355 Human Sirt6 Crystal Structure In Complex With Adp R 8e-76
1yc5_A246 Sir2-P53 Peptide-Nicotinamide Length = 246 2e-31
2h4h_A246 Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 6e-31
2h59_A246 Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp 2e-30
1ma3_A253 Structure Of A Sir2 Enzyme Bound To An Acetylated P 7e-28
1ici_A256 Crystal Structure Of A Sir2 Homolog-Nad Complex Len 9e-28
1m2g_A249 Sir2 Homologue-Adp Ribose Complex Length = 249 1e-27
1m2n_A249 Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety 2e-27
1m2h_A249 Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt 2e-27
1m2k_A249 Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng 3e-27
1m2j_A249 Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt 7e-27
3jwp_A265 Crystal Structure Of Plasmodium Falciparum Sir2a (P 2e-20
3u31_A290 Plasmodium Falciparum Sir2a Preferentially Hydrolyz 3e-20
3rig_A273 Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla 5e-17
4hda_A275 Crystal Structure Of Human Sirt5 In Complex With Fl 5e-17
2b4y_A271 Crystal Structure Of Human Sirtuin Homolog 5 Length 6e-17
2nyr_A271 Crystal Structure Of Human Sirtuin Homolog 5 In Com 6e-17
4g1c_A267 Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length 6e-17
1j8f_A323 Human Sirt2 Histone Deacetylase Length = 323 2e-16
1j8f_C323 Human Sirt2 Histone Deacetylase Length = 323 2e-16
4fvt_A274 Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L 2e-15
3glr_A285 Crystal Structure Of Human Sirt3 With Acetyl-Lysine 3e-15
4hd8_A284 Crystal Structure Of Human Sirt3 In Complex With Fl 3e-15
1szc_A297 Structural Basis For Nicotinamide Cleavage And Adp- 3e-11
1q17_A300 Structure Of The Yeast Hst2 Protein Deacetylase In 3e-11
1q14_A361 Structure And Autoregulation Of The Yeast Hst2 Homo 3e-11
1s5p_A235 Structure And Substrate Binding Properties Of Cobb, 3e-11
1q1a_A289 Structure Of The Yeast Hst2 Protein Deacetylase In 3e-11
2od7_A308 Crystal Structure Of Yhst2 Bound To The Intermediat 4e-11
2od2_A308 Crystal Structure Of Yhst2 I117f Mutant Bound To Ca 7e-11
4iao_A492 Crystal Structure Of Sir2 C543s Mutant In Complex W 2e-10
4i5i_A287 Crystal Structure Of The Sirt1 Catalytic Domain Bou 8e-10
2hjh_A354 Crystal Structure Of The Sir2 Deacetylase Length = 1e-09
>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6 Length = 318 Back     alignment and structure 
Iteration: 1

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 141/276 (51%), Positives = 189/276 (68%), Gaps = 7/276 (2%)
Query: 2   SLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGI 61
           S+ YA  LS   D G  G+ EIFDPP  L++K+ ELA ++ +S  +V  TGAGIST+ GI
Sbjct: 2   SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGI 61
Query: 62  PDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHL 121
           PDFRGP GVWT++  G   P+    F+ A P+ THMALV+LE+ G+L+F++SQNVD LH+
Sbjct: 62  PDFRGPHGVWTMEERGL-APKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHV 120
Query: 122 RSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVK------CGSR 175
           RSG PR+KLAELHGN F E C  C  +Y+RD  + T+G+K T R C+  K      C   
Sbjct: 121 RSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGE 180
Query: 176 LKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN 235
           L+DT+LDWED+LP  ++  A+E  R AD+ + LGTSLQI P+ NLPL + R GG++VIVN
Sbjct: 181 LRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVN 240
Query: 236 LQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPY 271
           LQ T  D+ A L +H  VD+V+  +M+HL L IP +
Sbjct: 241 LQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAW 276
>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose Length = 355 Back     alignment and structure
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246 Back     alignment and structure
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 Back     alignment and structure
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246 Back     alignment and structure
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253 Back     alignment and structure
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256 Back     alignment and structure
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265 Back     alignment and structure
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290 Back     alignment and structure
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273 Back     alignment and structure
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275 Back     alignment and structure
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271 Back     alignment and structure
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271 Back     alignment and structure
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267 Back     alignment and structure
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274 Back     alignment and structure
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285 Back     alignment and structure
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284 Back     alignment and structure
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297 Back     alignment and structure
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300 Back     alignment and structure
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361 Back     alignment and structure
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2 Homolog Protein Deacetylase From Eschericia Coli Length = 235 Back     alignment and structure
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289 Back     alignment and structure
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492 Back     alignment and structure
>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To Nad And An Ex527 Analog Length = 287 Back     alignment and structure
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 1e-130
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 1e-130
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 2e-90
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 2e-67
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 2e-65
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 1e-63
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 2e-63
1m2k_A249 Silent information regulator 2; protein-ligand com 3e-62
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 9e-59
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 5e-58
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 8e-58
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 3e-53
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 1e-52
3k1f_M197 Transcription initiation factor IIB; RNA polymeras 3e-04
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318 Back     alignment and structure
 Score =  375 bits (965), Expect = e-130
 Identities = 143/297 (48%), Positives = 193/297 (64%), Gaps = 7/297 (2%)

Query: 2   SLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGI 61
           S+ YA  LS   D G  G+ EIFDPP  L++K+ ELA ++ +S  +V  TGAGIST+ GI
Sbjct: 2   SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGI 61

Query: 62  PDFRGPKGVWTLQREGKGVPEASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHL 121
           PDFRGP GVWT++  G   P+    F+ A P+ THMALV+LE+ G+L+F++SQNVD LH+
Sbjct: 62  PDFRGPHGVWTMEERGL-APKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHV 120

Query: 122 RSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDV------KCGSR 175
           RSG PR+KLAELHGN F E C  C  +Y+RD  + T+G+K T R C+         C   
Sbjct: 121 RSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGE 180

Query: 176 LKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN 235
           L+DT+LDWED+LP  ++  A+E  R AD+ + LGTSLQI P+ NLPL + R GG++VIVN
Sbjct: 181 LRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVN 240

Query: 236 LQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVDLFQINLDQYSRPSRSDK 292
           LQ T  D+ A L +H  VD+V+  +M+HL L IP +    + +  L    RP     
Sbjct: 241 LQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWDGPRVLERALPPLPRPPTPKL 297
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246 Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361 Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249 Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354 Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273 Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235 Back     alignment and structure
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae} Length = 197 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 100.0
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 100.0
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 100.0
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 100.0
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 100.0
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 100.0
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 100.0
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 100.0
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 100.0
1m2k_A249 Silent information regulator 2; protein-ligand com 100.0
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 100.0
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 100.0
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 100.0
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 100.0
2c31_A 568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 93.5
2q28_A 564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 92.67
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 92.54
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 91.92
3lq1_A 578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 91.85
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 91.83
4feg_A 603 Pyruvate oxidase; carbanion, structure activity re 91.82
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 91.19
3eya_A 549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 90.85
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 90.75
3hww_A 556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 90.43
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 89.69
2x7j_A 604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 88.85
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 88.24
1q6z_A 528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 87.32
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 87.3
1o97_D320 Electron transferring flavoprotein alpha-subunit; 84.71
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.8e-80  Score=597.59  Aligned_cols=273  Identities=51%  Similarity=0.870  Sum_probs=238.4

Q ss_pred             cccccccCCCcccCCCCCCcccCCChhHHHHHHHHHHHHHHhCCcEEEEeCCCcCccCCCCCccCCCCccccccCCCCCC
Q 018442            2 SLGYAEKLSYREDVGSVGMSEIFDPPHLLQQKIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVP   81 (356)
Q Consensus         2 ~~~ya~~l~~~~~~g~~~~~e~~~~~~~l~~~i~~la~~i~~ak~Ivv~TGAGISt~sGIPdFR~~~G~w~~~~~~~~~p   81 (356)
                      |||||++||+|+|||+||+||+||+++++++++++|+++|++|++|||+|||||||+|||||||+++|+|+..+.+. .|
T Consensus         2 s~~ya~~l~~~~~~g~~~~~e~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~-~p   80 (318)
T 3k35_A            2 SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGL-AP   80 (318)
T ss_dssp             -------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTC-CC
T ss_pred             ccchhhhCCcccccCccCCccccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccC-CH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999765554 37


Q ss_pred             ccccccccCCCCHHHHHHHHHHHcCCceEEEeccccchHhhcCCCCCceeeccCCccccccCCCCCccchhhHHHhhccc
Q 018442           82 EASLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMK  161 (356)
Q Consensus        82 e~~~~f~~a~P~~~H~aL~~L~~~g~l~~viTQNIDgLh~rAG~~~~~v~elHG~~~~~~C~~C~~~y~~d~~~~~~~~~  161 (356)
                      +..+.|.+++||.+|++|++|++.|++++||||||||||+|||+++++|+|+|||++..+|..|++.|.++.....+..+
T Consensus        81 ~~~~~f~~a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~  160 (318)
T 3k35_A           81 KFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLK  160 (318)
T ss_dssp             CCSSCTTTCCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSC
T ss_pred             HHHHHhhhCCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccC
Confidence            77788999999999999999999999999999999999999999989999999999999999999998776543322222


Q ss_pred             CCCCcCCC------CCCCCccccceEecCCCCChhchHHHHHHhccCCEEEEEccCCCccccccccHHHhcCCCeEEEEc
Q 018442          162 KTPRRCSD------VKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN  235 (356)
Q Consensus       162 ~~~p~C~~------p~Cgg~lrp~Vv~fgE~lp~~~~~~a~~~~~~aDLlLvlGTSl~V~P~~~lp~~a~~~g~~lV~IN  235 (356)
                      +++|+|+.      +.|||.|||+||||||++|.+.++.|.+++++|||+|||||||+|+|+++||..+.++|+++|+||
T Consensus       161 p~~~~C~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN  240 (318)
T 3k35_A          161 ATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVN  240 (318)
T ss_dssp             EEEEECCC--------CCCEEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEEC
T ss_pred             CCCCcCcccccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEEC
Confidence            33456631      479999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCCCccEEEEccHHHHHHHHHHHhccCCCCccccc
Q 018442          236 LQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVD  275 (356)
Q Consensus       236 ~~~t~~d~~~dl~I~g~~d~vl~~l~~~L~~~iP~~~~~~  275 (356)
                      +++|+.|+.+|+.|+|+++++|++|+++|||+||+|+...
T Consensus       241 ~~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP~~~~~~  280 (318)
T 3k35_A          241 LQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWDGPR  280 (318)
T ss_dssp             SSCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCCCCCSCB
T ss_pred             CCCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999754
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1yc5a1245 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA 3e-55
d2b4ya1267 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt 4e-54
d1m2ka_249 c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar 5e-53
d1ma3a_252 c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc 2e-52
d1j8fa_323 c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho 6e-45
d1s5pa_235 c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch 4e-44
d1q1aa_289 c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c 1e-43
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

 Score =  179 bits (454), Expect = 3e-55
 Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)

Query: 33  KIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKGVPEA--------- 83
           K+ E   ++ +S+  V  TGAGIST  GIPDFRGP G++    +     +          
Sbjct: 2   KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFY 61

Query: 84  ------SLPFDRAMPSITHMALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNS 137
                   P  +A P++ H+ L +LE+ G+++ VI+QN+D LH R+G  +  + ELHGN 
Sbjct: 62  RFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKK--VIELHGNV 119

Query: 138 FREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEE 197
               C  C  +Y  +  I+ +     P       C S ++  ++ + + LP   +  A  
Sbjct: 120 EEYYCVRCEKKYTVEDVIKKLESSDVPLCD---DCNSLIRPNIVFFGENLPQDALREAIG 176

Query: 198 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVI 257
               A +++ LG+SL + PA  LPL ++R GGK+VIVNL +TP D  A+L  +  V +  
Sbjct: 177 LSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFA 236

Query: 258 AGVMRHLNL 266
             VM    +
Sbjct: 237 RRVMEEGGI 245
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 100.0
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 100.0
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 100.0
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 100.0
d1q1aa_289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 100.0
d1j8fa_323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 100.0
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 100.0
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 97.46
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 97.18
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 97.09
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 97.04
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 96.97
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 96.95
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 96.87
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 96.83
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 96.75
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 96.71
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 95.9
d1efva2124 C-terminal domain of the electron transfer flavopr 91.88
d3clsd2123 C-terminal domain of the electron transfer flavopr 88.0
d1pnoa_180 Transhydrogenase domain III (dIII) {Rhodospirillum 87.19
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 86.04
d1d4oa_177 Transhydrogenase domain III (dIII) {Cow (Bos tauru 80.82
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5e-64  Score=468.45  Aligned_cols=229  Identities=35%  Similarity=0.579  Sum_probs=198.8

Q ss_pred             HHHHHHHHHHhCCcEEEEeCCCcCccCCCCCccCCCCccccccCCCC-------CCccccc--------cccCCCCHHHH
Q 018442           33 KIAELAVMIKKSKHLVAFTGAGISTSCGIPDFRGPKGVWTLQREGKG-------VPEASLP--------FDRAMPSITHM   97 (356)
Q Consensus        33 ~i~~la~~i~~ak~Ivv~TGAGISt~sGIPdFR~~~G~w~~~~~~~~-------~pe~~~~--------f~~a~P~~~H~   97 (356)
                      |+++|+++|++|++|||+|||||||+||||||||++|+|+.......       .|+..|.        +.+++||.+|+
T Consensus         2 k~~~l~~~l~~~~~ivvltGAGiS~~SGIPdfR~~~G~w~~~~~~~~~~~~f~~~p~~~~~~~~~~~~~~~~~~P~~~H~   81 (245)
T d1yc5a1           2 KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV   81 (245)
T ss_dssp             CCHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------CCTTBHHHHHHCHHHHHHHHHHHTGGGGGCCCCHHHH
T ss_pred             cHHHHHHHHHhCCCEEEEECchhccccCCCCccCcCCCccCCCcccccHHHHHhhhHHHHHHHHhhhhhhhhhhhhhhhH
Confidence            57899999999999999999999999999999999999986543221       2333332        36899999999


Q ss_pred             HHHHHHHcCCceEEEeccccchHhhcCCCCCceeeccCCccccccCCCCCccchhhHHHhhcccCCCCcCCCCCCCCccc
Q 018442           98 ALVELEKAGILKFVISQNVDSLHLRSGIPREKLAELHGNSFREICPSCGVEYMRDFEIETIGMKKTPRRCSDVKCGSRLK  177 (356)
Q Consensus        98 aL~~L~~~g~l~~viTQNIDgLh~rAG~~~~~v~elHG~~~~~~C~~C~~~y~~d~~~~~~~~~~~~p~C~~p~Cgg~lr  177 (356)
                      +|++|++.|++.+||||||||||+|||+  ++|+|+||+++..+|..|++.|..+.....+. ....|+|  |.|||.+|
T Consensus        82 ~L~~l~~~~~~~~viTQNiDgLh~~AG~--~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~-~~~~p~c--~~Cgg~lr  156 (245)
T d1yc5a1          82 LLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLE-SSDVPLC--DDCNSLIR  156 (245)
T ss_dssp             HHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTT-TCSSCBC--TTTCCBEE
T ss_pred             HHHHHHhcCCCceEeecccchHHHHcCC--ccccccccccceeeecccCCCccHHHHhhhhh-cccCCCc--cccCCccc
Confidence            9999999999999999999999999998  58999999999999999999998876665543 4557889  79999999


Q ss_pred             cceEecCCCCChhchHHHHHHhccCCEEEEEccCCCccccccccHHHhcCCCeEEEEcCcCCCCCCCccEEEEccHHHHH
Q 018442          178 DTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVI  257 (356)
Q Consensus       178 p~Vv~fgE~lp~~~~~~a~~~~~~aDLlLvlGTSl~V~P~~~lp~~a~~~g~~lV~IN~~~t~~d~~~dl~I~g~~d~vl  257 (356)
                      |+|++|||.+|++.+..+.++++++||+|||||||+|+|++++|..++++|+++|+||+++|+.|..+|+.|+|+++++|
T Consensus       157 P~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V~p~~~l~~~a~~~g~~~i~IN~~~t~~d~~~d~~i~g~~~e~l  236 (245)
T d1yc5a1         157 PNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFA  236 (245)
T ss_dssp             EEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCCTTGGGCSEEECSCHHHHH
T ss_pred             CcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCeEEechhhhhHHHHHcCCeEEEECCCCCCCCcceeEEEeCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q 018442          258 AGVMRHLNL  266 (356)
Q Consensus       258 ~~l~~~L~~  266 (356)
                      ++|++.||+
T Consensus       237 ~~l~~~lgi  245 (245)
T d1yc5a1         237 RRVMEEGGI  245 (245)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHcCC
Confidence            999999984
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure