Citrus Sinensis ID: 018462
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 355 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VYL3 | 513 | Aspartic proteinase A2 OS | yes | no | 0.909 | 0.629 | 0.574 | 1e-113 | |
| O65390 | 506 | Aspartic proteinase A1 OS | no | no | 0.909 | 0.638 | 0.568 | 1e-112 | |
| P42211 | 496 | Aspartic proteinase OS=Or | yes | no | 0.963 | 0.689 | 0.523 | 1e-110 | |
| Q9XEC4 | 508 | Aspartic proteinase A3 OS | no | no | 0.988 | 0.690 | 0.511 | 1e-108 | |
| Q42456 | 509 | Aspartic proteinase oryza | no | no | 0.915 | 0.638 | 0.526 | 1e-108 | |
| P40782 | 473 | Cyprosin (Fragment) OS=Cy | N/A | no | 0.878 | 0.659 | 0.541 | 1e-105 | |
| P42210 | 508 | Phytepsin OS=Hordeum vulg | N/A | no | 0.923 | 0.645 | 0.526 | 1e-102 | |
| O04057 | 513 | Aspartic proteinase OS=Cu | N/A | no | 0.907 | 0.627 | 0.537 | 2e-98 | |
| Q9XFX4 | 506 | Procardosin-B OS=Cynara c | N/A | no | 0.907 | 0.636 | 0.498 | 8e-98 | |
| Q9XFX3 | 504 | Procardosin-A OS=Cynara c | N/A | no | 0.892 | 0.628 | 0.503 | 5e-92 |
| >sp|Q8VYL3|APA2_ARATH Aspartic proteinase A2 OS=Arabidopsis thaliana GN=APA2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 243/334 (72%), Gaps = 11/334 (3%)
Query: 29 SHGLLRIQLKKRQLGINTINAARLITKNEVHNR-----FNHP------KADVVYLNNYLD 77
+ G R+ LKK +L N A R +K E R +N+ AD+V L NYLD
Sbjct: 27 NDGTFRVGLKKLKLDPNNRLATRFGSKQEEALRSSLRSYNNNLGGDSGDADIVPLKNYLD 86
Query: 78 AQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVP 137
AQYYGEI IG+PPQ F+V+FDTGSSNLWVPS KC FS+SCY H++Y++ S TY K G
Sbjct: 87 AQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSCYFHAKYKSSRSSTYKKSGKR 146
Query: 138 CKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA 197
IHYGSG ISGFFS D V +GD+++KDQEF+E T E L FL +FDG+LGLGF++IA
Sbjct: 147 AAIHYGSGSISGFFSYDAVTVGDLVVKDQEFIETTSEPGLTFLVAKFDGLLGLGFQEIAV 206
Query: 198 GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKG 257
GNATP+WYNM++QG I + +FS WLN+DP SE GGEI+FGG D +HFRG H +VP+T++G
Sbjct: 207 GNATPVWYNMLKQGLIKRPVFSFWLNRDPKSEEGGEIVFGGVDPKHFRGEHTFVPVTQRG 266
Query: 258 YWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKT 317
YWQ +G++LI STG+C GC+AI DSGTS+LAGPT VVA IN AIGA G+VS QCKT
Sbjct: 267 YWQFDMGEVLIAGESTGYCGSGCSAIADSGTSLLAGPTAVVAMINKAIGASGVVSQQCKT 326
Query: 318 VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGS 351
VV +YG I + L++ QP+ +CS IGLC Y+G+
Sbjct: 327 VVDQYGQTILDLLLAETQPKKICSQIGLCAYDGT 360
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Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: - |
| >sp|O65390|APA1_ARATH Aspartic proteinase A1 OS=Arabidopsis thaliana GN=APA1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P42211|ASPRX_ORYSJ Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9XEC4|APA3_ARATH Aspartic proteinase A3 OS=Arabidopsis thaliana GN=APA3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2 | Back alignment and function description |
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| >sp|P40782|CYPR1_CYNCA Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P42210|ASPR_HORVU Phytepsin OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
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| >sp|O04057|ASPR_CUCPE Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9XFX4|CARDB_CYNCA Procardosin-B OS=Cynara cardunculus GN=cardB PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9XFX3|CARDA_CYNCA Procardosin-A OS=Cynara cardunculus GN=cardA PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 355 | ||||||
| 255556616 | 500 | Aspartic proteinase oryzasin-1 precursor | 0.960 | 0.682 | 0.666 | 1e-140 | |
| 359477267 | 502 | PREDICTED: aspartic proteinase [Vitis vi | 0.988 | 0.699 | 0.632 | 1e-131 | |
| 297736824 | 500 | unnamed protein product [Vitis vinifera] | 0.977 | 0.694 | 0.636 | 1e-130 | |
| 356565563 | 494 | PREDICTED: aspartic proteinase oryzasin- | 0.949 | 0.682 | 0.632 | 1e-130 | |
| 356545806 | 495 | PREDICTED: aspartic proteinase oryzasin- | 0.952 | 0.682 | 0.612 | 1e-128 | |
| 357450315 | 507 | Aspartic proteinase [Medicago truncatula | 0.983 | 0.688 | 0.601 | 1e-127 | |
| 224106994 | 483 | predicted protein [Populus trichocarpa] | 0.921 | 0.677 | 0.642 | 1e-126 | |
| 356556454 | 505 | PREDICTED: aspartic proteinase oryzasin- | 0.983 | 0.691 | 0.597 | 1e-123 | |
| 224124910 | 507 | predicted protein [Populus trichocarpa] | 0.980 | 0.686 | 0.578 | 1e-123 | |
| 359487701 | 502 | PREDICTED: aspartic proteinase oryzasin- | 0.943 | 0.667 | 0.594 | 1e-122 |
| >gi|255556616|ref|XP_002519342.1| Aspartic proteinase oryzasin-1 precursor, putative [Ricinus communis] gi|223541657|gb|EEF43206.1| Aspartic proteinase oryzasin-1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/354 (66%), Positives = 287/354 (81%), Gaps = 13/354 (3%)
Query: 1 MGIKFLLAAICM--WVCPCILASMPPPPPPSHGLLRIQLKKRQLGINTINAARLITKNEV 58
MG +FLL A+C+ W+ S L++I LKKR+L + +INAAR IT +
Sbjct: 7 MGFRFLLVALCLGAWL----------GASSSSRLVKIGLKKRRLDLYSINAAR-ITIADA 55
Query: 59 HNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCY 118
F PKADVVYL NYLD QYYGE+ IGSPPQ+F+VVFDTGSSNLWVPSSKC+ SI+CY
Sbjct: 56 SASFGWPKADVVYLKNYLDTQYYGEVAIGSPPQTFTVVFDTGSSNLWVPSSKCVLSITCY 115
Query: 119 LHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLP 178
HS++RA++SRTYTKIG+PCKI YGSG ISGFFSQD VK+GD ++DQEFVEVT+EGLL
Sbjct: 116 FHSKFRAKMSRTYTKIGLPCKIDYGSGSISGFFSQDYVKLGDATVRDQEFVEVTREGLLA 175
Query: 179 FLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGG 238
FL QFDGILGLGF++I G ATP+WYNMVRQGH++QK+FSLWLN+DP + +GGEI+FGG
Sbjct: 176 FLGTQFDGILGLGFQEITVGQATPVWYNMVRQGHVNQKLFSLWLNRDPTAGMGGEIVFGG 235
Query: 239 FDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298
DWRHFRG H YVP+TEKGYWQI+VGD+ I STG CE GC AI+DSGTS +AGPTT+V
Sbjct: 236 LDWRHFRGEHTYVPVTEKGYWQIEVGDVFIAKKSTGMCEYGCAAIVDSGTSFIAGPTTIV 295
Query: 299 AQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSS 352
QINHAIGA+GIVS++CK+VV ++G++IWE LISG++PE VC DIGLCVYN +S
Sbjct: 296 TQINHAIGAQGIVSLECKSVVTKFGDLIWESLISGLRPEIVCVDIGLCVYNNNS 349
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477267|ref|XP_002275241.2| PREDICTED: aspartic proteinase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297736824|emb|CBI26025.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356565563|ref|XP_003551009.1| PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545806|ref|XP_003541325.1| PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357450315|ref|XP_003595434.1| Aspartic proteinase [Medicago truncatula] gi|355484482|gb|AES65685.1| Aspartic proteinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224106994|ref|XP_002314336.1| predicted protein [Populus trichocarpa] gi|222863376|gb|EEF00507.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356556454|ref|XP_003546541.1| PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224124910|ref|XP_002319454.1| predicted protein [Populus trichocarpa] gi|222857830|gb|EEE95377.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359487701|ref|XP_002276363.2| PREDICTED: aspartic proteinase oryzasin-1-like [Vitis vinifera] gi|296089851|emb|CBI39670.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 355 | ||||||
| UNIPROTKB|B9RXH6 | 511 | RCOM_0903730 "Aspartic protein | 0.983 | 0.682 | 0.538 | 3.6e-105 | |
| TAIR|locus:2018037 | 513 | AT1G62290 [Arabidopsis thalian | 0.983 | 0.680 | 0.544 | 7.5e-105 | |
| TAIR|locus:2008940 | 506 | APA1 "aspartic proteinase A1" | 0.904 | 0.634 | 0.569 | 1.1e-103 | |
| TAIR|locus:2137189 | 508 | AT4G04460 [Arabidopsis thalian | 0.985 | 0.688 | 0.512 | 3e-101 | |
| FB|FBgn0029093 | 392 | cathD "cathD" [Drosophila mela | 0.785 | 0.711 | 0.482 | 6.9e-63 | |
| UNIPROTKB|Q05744 | 398 | CTSD "Cathepsin D" [Gallus gal | 0.681 | 0.608 | 0.483 | 1.3e-61 | |
| UNIPROTKB|O93428 | 396 | ctsd "Cathepsin D" [Chionodrac | 0.845 | 0.757 | 0.415 | 6.4e-60 | |
| UNIPROTKB|Q805F2 | 397 | ctse-b "Cathepsin E-B" [Xenopu | 0.785 | 0.702 | 0.426 | 1.7e-59 | |
| RGD|621511 | 407 | Ctsd "cathepsin D" [Rattus nor | 0.721 | 0.628 | 0.444 | 1.2e-58 | |
| WB|WBGene00000217 | 444 | asp-4 [Caenorhabditis elegans | 0.670 | 0.536 | 0.464 | 2.5e-58 |
| UNIPROTKB|B9RXH6 RCOM_0903730 "Aspartic proteinase, putative" [Ricinus communis (taxid:3988)] | Back alignment and assigned GO terms |
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Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 194/360 (53%), Positives = 260/360 (72%)
Query: 1 MGIKFLLAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKN---- 56
MG F + +++ +L+S+ + GL+R+ LKK +L N+ AARL +KN
Sbjct: 1 MGTNFKPLVLFLFLSS-LLSSLVSSAP-NDGLVRLGLKKMKLDENSRLAARLESKNAEAL 58
Query: 57 --EVHN---RFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111
V R + D+V L NYLDAQYYGEIGIG+PPQ F+VVFDTGSSNLWVPSSKC
Sbjct: 59 RASVRKYGLRGDSKDTDIVALKNYLDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSSKC 118
Query: 112 LFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEV 171
+FS++C+ HSRY++ S TY K G +IHYGSG ISGFFS DNV +G++++KDQEF+E
Sbjct: 119 IFSVACFFHSRYKSGQSSTYKKNGKSAEIHYGSGAISGFFSSDNVVVGNLVVKDQEFIEA 178
Query: 172 TKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231
TKE + F+A +FDGILGLGF++I+ GNA P+WYNM++QG I + +FS WLN++ E G
Sbjct: 179 TKEPGVTFVAAKFDGILGLGFQEISVGNAVPVWYNMIKQGLIKEPVFSFWLNRNTQGEEG 238
Query: 232 GEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVL 291
GEI+FGG D H++G H YVP+T+KGYWQ ++GD+LI + T +C GC+AI DSGTS+L
Sbjct: 239 GEIVFGGVDLNHYKGKHTYVPVTQKGYWQFEMGDVLIGHKPTEYCAGGCSAIADSGTSLL 298
Query: 292 AGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGS 351
AGPTTVV IN AIGA G+ S +CKTV+ +YG I + LI+ QP+ +CS IGLC ++G+
Sbjct: 299 AGPTTVVTLINEAIGATGVASQECKTVIAQYGETIMDLLIAEAQPKKICSQIGLCTFDGT 358
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| TAIR|locus:2018037 AT1G62290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008940 APA1 "aspartic proteinase A1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2137189 AT4G04460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| FB|FBgn0029093 cathD "cathD" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q05744 CTSD "Cathepsin D" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O93428 ctsd "Cathepsin D" [Chionodraco hamatus (taxid:36188)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q805F2 ctse-b "Cathepsin E-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| RGD|621511 Ctsd "cathepsin D" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| WB|WBGene00000217 asp-4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P42211 | ASPRX_ORYSJ | 3, ., 4, ., 2, 3, ., - | 0.5231 | 0.9633 | 0.6895 | yes | no |
| Q8VYL3 | APA2_ARATH | 3, ., 4, ., 2, 3, ., - | 0.5748 | 0.9098 | 0.6296 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.23 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00019733001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (502 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 355 | |||
| cd06098 | 317 | cd06098, phytepsin, Phytepsin, a plant homolog of | 1e-157 | |
| cd05485 | 329 | cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi | 3e-94 | |
| pfam00026 | 316 | pfam00026, Asp, Eukaryotic aspartyl protease | 2e-91 | |
| cd05490 | 325 | cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family | 2e-87 | |
| cd05488 | 320 | cd05488, Proteinase_A_fungi, Fungal Proteinase A , | 6e-83 | |
| cd05487 | 326 | cd05487, renin_like, Renin stimulates production o | 1e-82 | |
| cd05471 | 283 | cd05471, pepsin_like, Pepsin-like aspartic proteas | 2e-78 | |
| cd05478 | 317 | cd05478, pepsin_A, Pepsin A, aspartic protease pro | 2e-77 | |
| cd05486 | 316 | cd05486, Cathespin_E, Cathepsin E, non-lysosomal a | 3e-75 | |
| cd05477 | 318 | cd05477, gastricsin, Gastricsins, asparate proteas | 5e-66 | |
| PTZ00165 | 482 | PTZ00165, PTZ00165, aspartyl protease; Provisional | 2e-58 | |
| PTZ00147 | 453 | PTZ00147, PTZ00147, plasmepsin-1; Provisional | 2e-44 | |
| PTZ00013 | 450 | PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisiona | 2e-38 | |
| cd05474 | 295 | cd05474, SAP_like, SAPs, pepsin-like proteinases s | 5e-32 | |
| cd05470 | 109 | cd05470, pepsin_retropepsin_like, Cellular and ret | 4e-31 | |
| cd05473 | 364 | cd05473, beta_secretase_like, Beta-secretase, aspa | 8e-28 | |
| cd06097 | 278 | cd06097, Aspergillopepsin_like, Aspergillopepsin_l | 2e-24 | |
| cd06096 | 326 | cd06096, Plasmepsin_5, Plasmepsins are a class of | 6e-19 | |
| cd05476 | 265 | cd05476, pepsin_A_like_plant, Chroloplast Nucleoid | 4e-11 | |
| pfam03489 | 35 | pfam03489, SapB_2, Saposin-like type B, region 2 | 6e-10 | |
| smart00741 | 76 | smart00741, SapB, Saposin (B) Domains | 6e-06 | |
| cd05472 | 299 | cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin | 0.001 |
| >gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
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Score = 444 bits (1143), Expect = e-157
Identities = 158/277 (57%), Positives = 198/277 (71%), Gaps = 8/277 (2%)
Query: 70 VYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSR 129
V L NYLDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPSSKC FSI+CY HS+Y++ S
Sbjct: 1 VALKNYLDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYKSSKSS 60
Query: 130 TYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILG 189
TY K G I YG+G ISGFFSQD+V +GD+++K+Q F+E TKE L FL +FDGILG
Sbjct: 61 TYKKNGTSASIQYGTGSISGFFSQDSVTVGDLVVKNQVFIEATKEPGLTFLLAKFDGILG 120
Query: 190 LGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHI 249
LGF++I+ G A P+WYNMV QG + + +FS WLN++P+ E GGE++FGG D +HF+G H
Sbjct: 121 LGFQEISVGKAVPVWYNMVEQGLVKEPVFSFWLNRNPDEEEGGELVFGGVDPKHFKGEHT 180
Query: 250 YVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEG 309
YVP+T KGYWQ ++GD+LI STGFC GC AI DSGTS+LAGPTT+V QIN A+
Sbjct: 181 YVPVTRKGYWQFEMGDVLIGGKSTGFCAGGCAAIADSGTSLLAGPTTIVTQINSAVDCNS 240
Query: 310 IVSMQCKTVVFEYGNMIWEF------LISGVQPETVC 340
+ SM V F G +E L G C
Sbjct: 241 LSSM--PNVSFTIGGKTFELTPEQYILKVGEGAAAQC 275
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Phytepsin, a plant homolog of mammalian lysosomal pepsins, resides in grains, roots, stems, leaves and flowers. Phytepsin may participate in metabolic turnover and in protein processing events. In addition, it highly expressed in several plant tissues undergoing apoptosis. Phytepsin contains an internal region consisting of about 100 residues not present in animal or microbial pepsins. This region is thus called a plant specific insert. The insert is highly similar to saponins, which are lysosomal sphingolipid-activating proteins in mammalian cells. The saponin-like domain may have a role in the vacuolar targeting of phytepsin. Phytepsin, as its animal counterparts, possesses a topology typical of all aspartic proteases. They are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe has probably evolved from the other through a gene duplication event in the distant past. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 317 |
| >gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases | Back alignment and domain information |
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| >gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease | Back alignment and domain information |
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| >gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
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| >gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
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| >gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
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| >gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
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| >gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
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| >gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease | Back alignment and domain information |
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| >gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
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| >gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional | Back alignment and domain information |
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| >gnl|CDD|140176 PTZ00147, PTZ00147, plasmepsin-1; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|140051 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
| >gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases | Back alignment and domain information |
|---|
| >gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease | Back alignment and domain information |
|---|
| >gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin | Back alignment and domain information |
|---|
| >gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
|---|
| >gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
|---|
| >gnl|CDD|112314 pfam03489, SapB_2, Saposin-like type B, region 2 | Back alignment and domain information |
|---|
| >gnl|CDD|214797 smart00741, SapB, Saposin (B) Domains | Back alignment and domain information |
|---|
| >gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 355 | |||
| PTZ00165 | 482 | aspartyl protease; Provisional | 100.0 | |
| cd06098 | 317 | phytepsin Phytepsin, a plant homolog of mammalian | 100.0 | |
| cd05490 | 325 | Cathepsin_D2 Cathepsin_D2, pepsin family of protei | 100.0 | |
| cd05486 | 316 | Cathespin_E Cathepsin E, non-lysosomal aspartic pr | 100.0 | |
| cd05478 | 317 | pepsin_A Pepsin A, aspartic protease produced in g | 100.0 | |
| cd05485 | 329 | Cathepsin_D_like Cathepsin_D_like, pepsin family o | 100.0 | |
| cd05487 | 326 | renin_like Renin stimulates production of angioten | 100.0 | |
| cd05477 | 318 | gastricsin Gastricsins, asparate proteases produce | 100.0 | |
| cd05488 | 320 | Proteinase_A_fungi Fungal Proteinase A , aspartic | 100.0 | |
| PTZ00147 | 453 | plasmepsin-1; Provisional | 100.0 | |
| PTZ00013 | 450 | plasmepsin 4 (PM4); Provisional | 100.0 | |
| PF00026 | 317 | Asp: Eukaryotic aspartyl protease The Prosite entr | 100.0 | |
| cd06097 | 278 | Aspergillopepsin_like Aspergillopepsin_like, aspar | 100.0 | |
| KOG1339 | 398 | consensus Aspartyl protease [Posttranslational mod | 100.0 | |
| cd05473 | 364 | beta_secretase_like Beta-secretase, aspartic-acid | 100.0 | |
| cd06096 | 326 | Plasmepsin_5 Plasmepsins are a class of aspartic p | 100.0 | |
| cd05474 | 295 | SAP_like SAPs, pepsin-like proteinases secreted fr | 100.0 | |
| PLN03146 | 431 | aspartyl protease family protein; Provisional | 100.0 | |
| cd05471 | 283 | pepsin_like Pepsin-like aspartic proteases, biloba | 100.0 | |
| cd05472 | 299 | cnd41_like Chloroplast Nucleoids DNA-binding Prote | 100.0 | |
| cd05476 | 265 | pepsin_A_like_plant Chroloplast Nucleoids DNA-bind | 100.0 | |
| cd05475 | 273 | nucellin_like Nucellins, plant aspartic proteases | 100.0 | |
| cd05489 | 362 | xylanase_inhibitor_I_like TAXI-I inhibits degradat | 100.0 | |
| cd05470 | 109 | pepsin_retropepsin_like Cellular and retroviral pe | 99.92 | |
| PF14543 | 164 | TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A | 99.9 | |
| cd05483 | 96 | retropepsin_like_bacteria Bacterial aspartate prot | 98.31 | |
| PF14541 | 161 | TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D | 98.0 | |
| TIGR02281 | 121 | clan_AA_DTGA clan AA aspartic protease, TIGR02281 | 97.69 | |
| PF13650 | 90 | Asp_protease_2: Aspartyl protease | 97.03 | |
| COG3577 | 215 | Predicted aspartyl protease [General function pred | 96.45 | |
| cd05479 | 124 | RP_DDI RP_DDI; retropepsin-like domain of DNA dama | 96.18 | |
| PF11925 | 370 | DUF3443: Protein of unknown function (DUF3443); In | 96.13 | |
| cd05484 | 91 | retropepsin_like_LTR_2 Retropepsins_like_LTR, peps | 94.96 | |
| cd06095 | 86 | RP_RTVL_H_like Retropepsin of the RTVL_H family of | 92.63 | |
| PF07966 | 29 | A1_Propeptide: A1 Propeptide ; InterPro: IPR012848 | 89.92 | |
| PF13975 | 72 | gag-asp_proteas: gag-polyprotein putative aspartyl | 88.85 | |
| TIGR02281 | 121 | clan_AA_DTGA clan AA aspartic protease, TIGR02281 | 86.77 | |
| PF13650 | 90 | Asp_protease_2: Aspartyl protease | 84.15 | |
| PF00077 | 100 | RVP: Retroviral aspartyl protease The Prosite entr | 83.7 | |
| PF13975 | 72 | gag-asp_proteas: gag-polyprotein putative aspartyl | 82.77 | |
| cd05484 | 91 | retropepsin_like_LTR_2 Retropepsins_like_LTR, peps | 80.34 |
| >PTZ00165 aspartyl protease; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=441.54 Aligned_cols=313 Identities=33% Similarity=0.589 Sum_probs=260.7
Q ss_pred ceEEEeeeeeechhhhHHhhhhh---hhhhccccc------CCCCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCC
Q 018462 31 GLLRIQLKKRQLGINTINAARLI---TKNEVHNRF------NHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGS 101 (355)
Q Consensus 31 ~~~~ipl~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS 101 (355)
.++||||+|.++.|+.+.+.+.. .+....+.+ .......+||.|+.|.+|+++|+||||||+|+|+|||||
T Consensus 63 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~I~IGTPpQ~f~Vv~DTGS 142 (482)
T PTZ00165 63 PAHKVELHRFALLKKKRKKNSEKGYISRVLTKHKYLETKDPNGLQYLQQDLLNFHNSQYFGEIQVGTPPKSFVVVFDTGS 142 (482)
T ss_pred heEEeeeEEcchHHHhhhhHHHHHhhhhhhhccccccccccccccccceecccccCCeEEEEEEeCCCCceEEEEEeCCC
Confidence 57999999988776654443111 011000000 001346799999999999999999999999999999999
Q ss_pred CceeEeCCCCCCCcccCCCCcccCCCCcceee--cCc---eEEEEeCCccEEEeEEEeeeeeeeeeecCcEEEEEEecCC
Q 018462 102 SNLWVPSSKCLFSISCYLHSRYRARLSRTYTK--IGV---PCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGL 176 (355)
Q Consensus 102 ~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~--~~~---~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~ 176 (355)
+++||++..|. ...|..|+.|||++|+||+. .+. .+.++|++|++.|.+++|+|+||+..+++|.||++...++
T Consensus 143 S~lWVps~~C~-~~~C~~~~~yd~s~SSTy~~~~~~~~~~~~~i~YGsGs~~G~l~~DtV~ig~l~i~~q~FG~a~~~s~ 221 (482)
T PTZ00165 143 SNLWIPSKECK-SGGCAPHRKFDPKKSSTYTKLKLGDESAETYIQYGTGECVLALGKDTVKIGGLKVKHQSIGLAIEESL 221 (482)
T ss_pred CCEEEEchhcC-cccccccCCCCccccCCcEecCCCCccceEEEEeCCCcEEEEEEEEEEEECCEEEccEEEEEEEeccc
Confidence 99999999997 56899999999999999998 555 6889999999999999999999999999999999998766
Q ss_pred ccccccccceeeccccccc---cCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCCc--ccceEEE
Q 018462 177 LPFLALQFDGILGLGFRDI---AAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHF--RGSHIYV 251 (355)
Q Consensus 177 ~~~~~~~~~GilGLg~~~~---s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~--~g~l~~~ 251 (355)
..|...++|||||||++.. +.....|++++|++||+|++++||+||.+..+ .+|+|+|||+|++++ .|++.|+
T Consensus 222 ~~f~~~~~DGILGLg~~~~s~~s~~~~~p~~~~l~~qgli~~~~FS~yL~~~~~--~~G~l~fGGiD~~~~~~~g~i~~~ 299 (482)
T PTZ00165 222 HPFADLPFDGLVGLGFPDKDFKESKKALPIVDNIKKQNLLKRNIFSFYMSKDLN--QPGSISFGSADPKYTLEGHKIWWF 299 (482)
T ss_pred cccccccccceeecCCCcccccccCCCCCHHHHHHHcCCcccceEEEEeccCCC--CCCEEEeCCcCHHHcCCCCceEEE
Confidence 5677778999999999887 33456889999999999999999999986532 379999999999877 5789999
Q ss_pred eccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCCceEEEeCCc------eecccCCE
Q 018462 252 PITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKT------VVFEYGNM 325 (355)
Q Consensus 252 p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~~~~~v~C~~------i~~~fg~~ 325 (355)
|+.+.+||+|.+++|+++++.+..+..++.|++||||+++++|++++++|.+++++. .+|++ +.|.||+.
T Consensus 300 Pv~~~~yW~i~l~~i~vgg~~~~~~~~~~~aIiDTGTSli~lP~~~~~~i~~~i~~~----~~C~~~~~lP~itf~f~g~ 375 (482)
T PTZ00165 300 PVISTDYWEIEVVDILIDGKSLGFCDRKCKAAIDTGSSLITGPSSVINPLLEKIPLE----EDCSNKDSLPRISFVLEDV 375 (482)
T ss_pred EccccceEEEEeCeEEECCEEeeecCCceEEEEcCCCccEeCCHHHHHHHHHHcCCc----ccccccccCCceEEEECCC
Confidence 999999999999999999988766667789999999999999999999999999875 48984 67888865
Q ss_pred -----EEEEecCCcCccc--cccccCceEeCC
Q 018462 326 -----IWEFLISGVQPET--VCSDIGLCVYNG 350 (355)
Q Consensus 326 -----~~~~~~~~~~~~~--~~~~~~~C~~~~ 350 (355)
.|++++.++..+. ...+.+.|+++.
T Consensus 376 ~g~~v~~~l~p~dYi~~~~~~~~~~~~C~~g~ 407 (482)
T PTZ00165 376 NGRKIKFDMDPEDYVIEEGDSEEQEHQCVIGI 407 (482)
T ss_pred CCceEEEEEchHHeeeecccCCCCCCeEEEEE
Confidence 8999999984332 234667898743
|
|
| >cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
|---|
| >cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
|---|
| >cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease | Back alignment and domain information |
|---|
| >cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
|---|
| >cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases | Back alignment and domain information |
|---|
| >cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
|---|
| >cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
|---|
| >cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
|---|
| >PTZ00147 plasmepsin-1; Provisional | Back alignment and domain information |
|---|
| >PTZ00013 plasmepsin 4 (PM4); Provisional | Back alignment and domain information |
|---|
| >PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 | Back alignment and domain information |
|---|
| >cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin | Back alignment and domain information |
|---|
| >KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease | Back alignment and domain information |
|---|
| >cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
|---|
| >cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
| >PLN03146 aspartyl protease family protein; Provisional | Back alignment and domain information |
|---|
| >cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
|---|
| >cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
|---|
| >cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
|---|
| >cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation | Back alignment and domain information |
|---|
| >cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall | Back alignment and domain information |
|---|
| >cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases | Back alignment and domain information |
|---|
| >PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A | Back alignment and domain information |
|---|
| >cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family | Back alignment and domain information |
|---|
| >PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A | Back alignment and domain information |
|---|
| >TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family | Back alignment and domain information |
|---|
| >PF13650 Asp_protease_2: Aspartyl protease | Back alignment and domain information |
|---|
| >COG3577 Predicted aspartyl protease [General function prediction only] | Back alignment and domain information |
|---|
| >cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein | Back alignment and domain information |
|---|
| >PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases | Back alignment and domain information |
|---|
| >cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements | Back alignment and domain information |
|---|
| >PF07966 A1_Propeptide: A1 Propeptide ; InterPro: IPR012848 Most eukaryotic endopeptidases (MEROPS peptidase family A1) are synthesised with signal and propeptides | Back alignment and domain information |
|---|
| >PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease | Back alignment and domain information |
|---|
| >TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family | Back alignment and domain information |
|---|
| >PF13650 Asp_protease_2: Aspartyl protease | Back alignment and domain information |
|---|
| >PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease | Back alignment and domain information |
|---|
| >cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 355 | ||||
| 1qdm_A | 478 | Crystal Structure Of Prophytepsin, A Zymogen Of A B | 1e-102 | ||
| 1b5f_A | 239 | Native Cardosin A From Cynara Cardunculus L. Length | 2e-76 | ||
| 1smr_A | 335 | The 3-D Structure Of Mouse Submaxillary Renin Compl | 1e-57 | ||
| 1tzs_A | 351 | Crystal Structure Of An Activation Intermediate Of | 3e-57 | ||
| 2i4q_A | 336 | Human ReninPF02342674 COMPLEX Length = 336 | 4e-56 | ||
| 2x0b_A | 383 | Crystal Structure Of Human Angiotensinogen Complexe | 5e-56 | ||
| 1hrn_A | 337 | High Resolution Crystal Structures Of Recombinant H | 5e-56 | ||
| 3d91_A | 341 | Human Renin In Complex With Remikiren Length = 341 | 5e-56 | ||
| 2g24_A | 333 | Ketopiperazine-Based Renin Inhibitors: Optimization | 6e-56 | ||
| 2bks_A | 340 | Crystal Structure Of Renin-Pf00074777 Complex Lengt | 6e-56 | ||
| 3vcm_A | 335 | Crystal Structure Of Human Prorenin Length = 335 | 6e-56 | ||
| 1g0v_A | 329 | The Structure Of Proteinase A Complexed With A Ia3 | 7e-52 | ||
| 1dp5_A | 329 | The Structure Of Proteinase A Complexed With A Ia3 | 8e-52 | ||
| 2jxr_A | 329 | Structure Of Yeast Proteinase A Length = 329 | 9e-52 | ||
| 1flh_A | 326 | Crystal Structure Of Human Uropepsin At 2.45 A Reso | 2e-50 | ||
| 1pso_E | 326 | The Crystal Structure Of Human Pepsin And Its Compl | 2e-50 | ||
| 3psg_A | 370 | The High Resolution Crystal Structure Of Porcine Pe | 2e-49 | ||
| 2psg_A | 370 | Refined Structure Of Porcine Pepsinogen At 1.8 Angs | 3e-49 | ||
| 1htr_B | 329 | Crystal And Molecular Structures Of Human Progastri | 9e-49 | ||
| 5pep_A | 326 | X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim | 2e-48 | ||
| 3pep_A | 326 | Revised 2.3 Angstroms Structure Of Porcine Pepsin. | 4e-48 | ||
| 1psa_A | 326 | Structure Of A Pepsin(Slash)renin Inhibitor Complex | 4e-48 | ||
| 1f34_A | 326 | Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou | 4e-48 | ||
| 4pep_A | 326 | The Molecular And Crystal Structures Of Monoclinic | 5e-48 | ||
| 4aa9_A | 320 | Camel Chymosin At 1.6a Resolution Length = 320 | 6e-46 | ||
| 1czi_E | 323 | Chymosin Complex With The Inhibitor Cp-113972 Lengt | 9e-46 | ||
| 3cms_A | 323 | Engineering Enzyme Sub-Site Specificity: Preparatio | 1e-45 | ||
| 1am5_A | 324 | The Crystal Structure And Proposed Amino Acid Seque | 5e-45 | ||
| 3oad_A | 166 | Design And Optimization Of New Piperidines As Renin | 1e-38 | ||
| 3qrv_A | 336 | Crystal Structure Of Plasmepsin I (Pmi) From Plasmo | 2e-36 | ||
| 2anl_A | 327 | X-Ray Crystal Structure Of The Aspartic Protease Pl | 5e-34 | ||
| 1miq_A | 375 | Crystal Structure Of Proplasmepsin From The Human M | 2e-32 | ||
| 2bju_A | 453 | Plasmepsin Ii Complexed With A Highly Active Achira | 6e-32 | ||
| 1ls5_A | 328 | Crystal Structure Of Plasmepsin Iv From P. Falcipar | 7e-32 | ||
| 1pfz_A | 380 | Proplasmepsin Ii From Plasmodium Falciparum Length | 8e-32 | ||
| 1lf3_A | 331 | Crystal Structure Of Plasmepsin Ii From P Falciparu | 9e-32 | ||
| 1sme_A | 329 | Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From P | 1e-31 | ||
| 1qs8_B | 329 | Crystal Structure Of The P. Vivax Aspartic Proteina | 1e-31 | ||
| 3f9q_A | 329 | Re-Refinement Of Uncomplexed Plasmepsin Ii From Pla | 3e-31 | ||
| 1m43_A | 331 | Crystal Structure Of Pmii In Complex With Pepstatin | 4e-31 | ||
| 3apr_E | 325 | Binding Of A Reduced Peptide Inhibitor To The Aspar | 2e-30 | ||
| 1uh7_A | 325 | Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt | 3e-30 | ||
| 1lya_B | 241 | Crystal Structures Of Native And Inhibited Forms Of | 5e-30 | ||
| 3qvc_A | 451 | Crystal Structure Of Histo-Aspartic Protease (Hap) | 3e-29 | ||
| 3fns_A | 332 | Crystal Structure Of Histo-Aspartic Protease (Hap) | 2e-28 | ||
| 1lyw_A | 97 | Cathepsin D At Ph 7.5 Length = 97 | 1e-26 | ||
| 2qzw_A | 341 | Secreted Aspartic Proteinase (Sap) 1 From Candida A | 2e-21 | ||
| 3fv3_A | 339 | Secreted Aspartic Protease 1 From Candida Parapsilo | 4e-21 | ||
| 1eag_A | 342 | Secreted Aspartic Proteinase (Sap2) From Candida Al | 9e-21 | ||
| 2qzx_A | 342 | Secreted Aspartic Proteinase (Sap) 5 From Candida A | 1e-20 | ||
| 1zap_A | 342 | Secreted Aspartic Protease From C. Albicans Length | 3e-20 | ||
| 2h6s_A | 340 | Secreted Aspartic Proteinase (sap) 3 From Candida A | 2e-19 | ||
| 2rmp_A | 361 | Rmp-Pepstatin A Complex Length = 361 | 4e-19 | ||
| 2vie_A | 392 | Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- | 4e-18 | ||
| 2q15_A | 385 | Structure Of Bace Complexed To Compound 3a Length = | 4e-18 | ||
| 2q11_A | 388 | Structure Of Bace Complexed To Compound 1 Length = | 4e-18 | ||
| 4ewo_A | 386 | Design And Synthesis Of Potent Hydroxyethylamine (H | 8e-18 | ||
| 2fdp_A | 388 | Crystal Structure Of Beta-Secretase Complexed With | 8e-18 | ||
| 2hm1_A | 406 | Crystal Structure Of Human Beta-Secretase (Bace) In | 8e-18 | ||
| 1fkn_A | 391 | Structure Of Beta-Secretase Complexed With Inhibito | 8e-18 | ||
| 3udh_A | 404 | Crystal Structure Of Bace With Compound 1 Length = | 8e-18 | ||
| 3bra_A | 409 | Bace-1 Complexed With Compound 1 Length = 409 | 8e-18 | ||
| 4dpf_A | 391 | Bace-1 In Complex With A Hea-Macrocyclic Type Inhib | 8e-18 | ||
| 3u6a_A | 390 | Rational Design And Synthesis Of Aminopiperazinones | 8e-18 | ||
| 1sgz_A | 389 | Crystal Structure Of Unbound Beta-Secretase Catalyt | 9e-18 | ||
| 2wjo_A | 412 | Human Bace (Beta Secretase) In Complex With Cyclohe | 9e-18 | ||
| 2zjh_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 9e-18 | ||
| 3cib_A | 390 | Structure Of Bace Bound To Sch727596 Length = 390 | 9e-18 | ||
| 4b1d_A | 388 | New Aminoimidazoles As Bace-1 Inhibitors: From Rati | 9e-18 | ||
| 2zji_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 9e-18 | ||
| 2qu2_A | 415 | Bace1 With Compound 1 Length = 415 | 1e-17 | ||
| 3kmx_A | 395 | Structure Of Bace Bound To Sch346572 Length = 395 | 1e-17 | ||
| 2zjn_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 1e-17 | ||
| 3dm6_A | 406 | Beta-Secretase 1 Complexed With Statine-Based Inhib | 1e-17 | ||
| 2zhr_A | 411 | Crystal Structure Of Bace1 In Complex With Om99-2 A | 1e-17 | ||
| 2qk5_A | 395 | Structure Of Bace1 Bound To Sch626485 Length = 395 | 1e-17 | ||
| 1w50_A | 411 | Apo Structure Of Bace (beta Secretase) Length = 411 | 1e-17 | ||
| 3l58_A | 414 | Structure Of Bace Bound To Sch589432 Length = 414 | 1e-17 | ||
| 3hvg_A | 411 | Structure Of Bace (Beta Secretase) In Complex With | 1e-17 | ||
| 3ixk_A | 405 | Potent Beta-Secretase 1 Inhibitor Length = 405 | 1e-17 | ||
| 2of0_A | 402 | X-Ray Crystal Structure Of Beta Secretase Complexed | 1e-17 | ||
| 3ckp_A | 412 | Crystal Structure Of Bace-1 In Complex With Inhibit | 1e-17 | ||
| 3r1g_B | 402 | Structure Basis Of Allosteric Inhibition Of Bace1 B | 1e-17 | ||
| 1j71_A | 334 | Structure Of The Extracellular Aspartic Proteinase | 1e-17 | ||
| 1ym4_A | 408 | Crystal Structure Of Human Beta Secretase Complexed | 1e-17 | ||
| 1ym2_A | 402 | Crystal Structure Of Human Beta Secretase Complexed | 1e-17 | ||
| 3vv6_A | 416 | Crystal Structure Of Beta Secetase In Complex With | 1e-17 | ||
| 3exo_A | 413 | Crystal Structure Of Bace1 Bound To Inhibitor Lengt | 1e-17 | ||
| 2qzl_A | 411 | Crystal Structure Of Human Beta Secretase Complexed | 1e-17 | ||
| 1tqf_A | 405 | Crystal Structure Of Human Beta Secretase Complexed | 1e-17 | ||
| 3tpr_A | 433 | Crystal Structure Of Bace1 Complexed With An Inhibi | 1e-17 | ||
| 2zjk_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 1e-17 | ||
| 2hiz_A | 455 | Crystal Structure Of Human Beta-Secretase (Bace) In | 2e-17 | ||
| 3qi1_A | 408 | Design And Synthesis Of Hydroxyethylamine (Hea) Bac | 2e-17 | ||
| 2va5_A | 455 | X-Ray Crystal Structure Of Beta Secretase Complexed | 2e-17 | ||
| 3lpi_A | 455 | Structure Of Bace Bound To Sch745132 Length = 455 | 2e-17 | ||
| 3tpj_A | 433 | Apo Structure Of Bace1 Length = 433 | 2e-17 | ||
| 1mpp_A | 361 | X-Ray Analyses Of Aspartic Proteinases. V. Structur | 7e-17 | ||
| 2zjj_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 7e-17 | ||
| 2ewy_A | 383 | Crystal Structure Of Human Bace2 In Complex With A | 1e-15 | ||
| 1wkr_A | 340 | Crystal Structure Of Aspartic Proteinase From Irpex | 2e-15 | ||
| 3liz_A | 334 | Crystal Structure Of Bla G 2 Complexed With Fab 4c3 | 4e-15 | ||
| 1yg9_A | 330 | The Structure Of Mutant (N93q) Of Bla G 2 Length = | 5e-15 | ||
| 4b1c_A | 375 | New Aminoimidazoles As Bace-1 Inhibitors: From Rati | 3e-13 | ||
| 3oad_B | 176 | Design And Optimization Of New Piperidines As Renin | 6e-12 | ||
| 3rfi_A | 108 | Crystal Structure Of The Saposin-Like Domain Of Pla | 3e-11 | ||
| 1ppl_E | 323 | Crystallographic Analysis Of Transition-State Mimic | 1e-07 | ||
| 1gkt_A | 329 | Neutron Laue Diffraction Structure Of Endothiapepsi | 4e-07 | ||
| 1gvt_A | 329 | Endothiapepsin Complex With Cp-80,794 Length = 329 | 4e-07 | ||
| 1er8_E | 330 | The Active Site Of Aspartic Proteinases Length = 33 | 2e-06 | ||
| 1epr_E | 330 | Endothia Aspartic Proteinase (Endothiapepsin) Compl | 2e-06 | ||
| 1izd_A | 323 | Crystal Structure Of Aspergillus Oryzae Aspartic Pr | 2e-06 | ||
| 1ibq_A | 325 | Aspergillopepsin From Aspergillus Phoenicis Length | 2e-05 | ||
| 3c9x_A | 329 | Crystal Structure Of Trichoderma Reesei Aspartic Pr | 1e-04 |
| >pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 | Back alignment and structure |
|
| >pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 | Back alignment and structure |
| >pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 | Back alignment and structure |
| >pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 | Back alignment and structure |
| >pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 | Back alignment and structure |
| >pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 | Back alignment and structure |
| >pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 | Back alignment and structure |
| >pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 | Back alignment and structure |
| >pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 | Back alignment and structure |
| >pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 | Back alignment and structure |
| >pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 | Back alignment and structure |
| >pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 | Back alignment and structure |
| >pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 | Back alignment and structure |
| >pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 | Back alignment and structure |
| >pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 | Back alignment and structure |
| >pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 | Back alignment and structure |
| >pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 | Back alignment and structure |
| >pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 | Back alignment and structure |
| >pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 | Back alignment and structure |
| >pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 | Back alignment and structure |
| >pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 | Back alignment and structure |
| >pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 | Back alignment and structure |
| >pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 | Back alignment and structure |
| >pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 | Back alignment and structure |
| >pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 | Back alignment and structure |
| >pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 | Back alignment and structure |
| >pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 | Back alignment and structure |
| >pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 | Back alignment and structure |
| >pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 | Back alignment and structure |
| >pdb|3QRV|A Chain A, Crystal Structure Of Plasmepsin I (Pmi) From Plasmodium Falciparum Length = 336 | Back alignment and structure |
| >pdb|2ANL|A Chain A, X-Ray Crystal Structure Of The Aspartic Protease Plasmepsin 4 From The Malarial Parasite Plasmodium Malariae Bound To An Allophenylnorstatine Based Inhibitor Length = 327 | Back alignment and structure |
| >pdb|1MIQ|A Chain A, Crystal Structure Of Proplasmepsin From The Human Malarial Pathogen Plasmodium Vivax Length = 375 | Back alignment and structure |
| >pdb|2BJU|A Chain A, Plasmepsin Ii Complexed With A Highly Active Achiral Inhibitor Length = 453 | Back alignment and structure |
| >pdb|1LS5|A Chain A, Crystal Structure Of Plasmepsin Iv From P. Falciparum In Complex With Pepstatin A Length = 328 | Back alignment and structure |
| >pdb|1PFZ|A Chain A, Proplasmepsin Ii From Plasmodium Falciparum Length = 380 | Back alignment and structure |
| >pdb|1LF3|A Chain A, Crystal Structure Of Plasmepsin Ii From P Falciparum In Complex With Inhibitor Eh58 Length = 331 | Back alignment and structure |
| >pdb|1SME|A Chain A, Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From Plasmodium Falciparum, In Complex With Pepstatin A Length = 329 | Back alignment and structure |
| >pdb|3F9Q|A Chain A, Re-Refinement Of Uncomplexed Plasmepsin Ii From Plasmodium Falciparum Length = 329 | Back alignment and structure |
| >pdb|1M43|A Chain A, Crystal Structure Of Pmii In Complex With Pepstatin A To 2.4 A Length = 331 | Back alignment and structure |
| >pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 | Back alignment and structure |
| >pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 | Back alignment and structure |
| >pdb|1LYA|B Chain B, Crystal Structures Of Native And Inhibited Forms Of Human Cathepsin D: Implications For Lysosomal Targeting And Drug Design Length = 241 | Back alignment and structure |
| >pdb|3QVC|A Chain A, Crystal Structure Of Histo-Aspartic Protease (Hap) Zymogen From Plasmodium Falciparum Length = 451 | Back alignment and structure |
| >pdb|3FNS|A Chain A, Crystal Structure Of Histo-Aspartic Protease (Hap) From Plasmodium Falciparum Length = 332 | Back alignment and structure |
| >pdb|1LYW|A Chain A, Cathepsin D At Ph 7.5 Length = 97 | Back alignment and structure |
| >pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 | Back alignment and structure |
| >pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 | Back alignment and structure |
| >pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 | Back alignment and structure |
| >pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans Length = 342 | Back alignment and structure |
| >pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 | Back alignment and structure |
| >pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 | Back alignment and structure |
| >pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex Length = 361 | Back alignment and structure |
| >pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 | Back alignment and structure |
| >pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 | Back alignment and structure |
| >pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 | Back alignment and structure |
| >pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 | Back alignment and structure |
| >pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 | Back alignment and structure |
| >pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 | Back alignment and structure |
| >pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 | Back alignment and structure |
| >pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 | Back alignment and structure |
| >pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 | Back alignment and structure |
| >pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 | Back alignment and structure |
| >pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 | Back alignment and structure |
| >pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 | Back alignment and structure |
| >pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 | Back alignment and structure |
| >pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 | Back alignment and structure |
| >pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 | Back alignment and structure |
| >pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 | Back alignment and structure |
| >pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 | Back alignment and structure |
| >pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 | Back alignment and structure |
| >pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 | Back alignment and structure |
| >pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 | Back alignment and structure |
| >pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 | Back alignment and structure |
| >pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 | Back alignment and structure |
| >pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 | Back alignment and structure |
| >pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 | Back alignment and structure |
| >pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 | Back alignment and structure |
| >pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 | Back alignment and structure |
| >pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 | Back alignment and structure |
| >pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 | Back alignment and structure |
| >pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 | Back alignment and structure |
| >pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 | Back alignment and structure |
| >pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 | Back alignment and structure |
| >pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 | Back alignment and structure |
| >pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 | Back alignment and structure |
| >pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 | Back alignment and structure |
| >pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 | Back alignment and structure |
| >pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 | Back alignment and structure |
| >pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 | Back alignment and structure |
| >pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 | Back alignment and structure |
| >pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 | Back alignment and structure |
| >pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 | Back alignment and structure |
| >pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 | Back alignment and structure |
| >pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 | Back alignment and structure |
| >pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 | Back alignment and structure |
| >pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 | Back alignment and structure |
| >pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And Refinement At 2.0 Angstroms Resolution Of The Aspartic Proteinase From Mucor Pusillus Length = 361 | Back alignment and structure |
| >pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 | Back alignment and structure |
| >pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 | Back alignment and structure |
| >pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex Lacteus Length = 340 | Back alignment and structure |
| >pdb|3LIZ|A Chain A, Crystal Structure Of Bla G 2 Complexed With Fab 4c3 Length = 334 | Back alignment and structure |
| >pdb|1YG9|A Chain A, The Structure Of Mutant (N93q) Of Bla G 2 Length = 330 | Back alignment and structure |
| >pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 | Back alignment and structure |
| >pdb|3OAD|B Chain B, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 176 | Back alignment and structure |
| >pdb|3RFI|A Chain A, Crystal Structure Of The Saposin-Like Domain Of Plant Aspartic Protease From Solanum Tuberosum Length = 108 | Back alignment and structure |
| >pdb|1PPL|E Chain E, Crystallographic Analysis Of Transition-State Mimics Bound To Penicillopepsin: Phosphorus-Containing Peptide Analogues Length = 323 | Back alignment and structure |
| >pdb|1GKT|A Chain A, Neutron Laue Diffraction Structure Of Endothiapepsin Complexed With Transition State Analogue Inhibitor H261 Length = 329 | Back alignment and structure |
| >pdb|1GVT|A Chain A, Endothiapepsin Complex With Cp-80,794 Length = 329 | Back alignment and structure |
| >pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases Length = 330 | Back alignment and structure |
| >pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed With Pd-135, 040 Length = 330 | Back alignment and structure |
| >pdb|1IZD|A Chain A, Crystal Structure Of Aspergillus Oryzae Aspartic Proteinase Length = 323 | Back alignment and structure |
| >pdb|1IBQ|A Chain A, Aspergillopepsin From Aspergillus Phoenicis Length = 325 | Back alignment and structure |
| >pdb|3C9X|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic Proteinase Length = 329 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-135
Identities = 173/329 (52%), Positives = 236/329 (71%), Gaps = 6/329 (1%)
Query: 33 LRIQLKKRQLGINTINAARLITKNE------VHNRFNHPKADVVYLNNYLDAQYYGEIGI 86
+RI LKKR + N+ A L E + + + D+V L NY++AQY+GEIG+
Sbjct: 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRSEEEGDIVALKNYMNAQYFGEIGV 60
Query: 87 GSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146
G+PPQ F+V+FDTGSSNLWVPS+KC FSI+CYLHSRY+A S TY K G P I YG+G
Sbjct: 61 GTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGS 120
Query: 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYN 206
I+G+FS+D+V +GD+++KDQEF+E TKE + FL +FDGILGLGF++I+ G A P+WY
Sbjct: 121 IAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYK 180
Query: 207 MVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDI 266
M+ QG +S +FS WLN+ + GGEIIFGG D +H+ G H YVP+T+KGYWQ +GD+
Sbjct: 181 MIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDV 240
Query: 267 LIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMI 326
L+ STGFC GC AI DSGTS+LAGPT ++ +IN IGA G+VS +CKT+V +YG I
Sbjct: 241 LVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQI 300
Query: 327 WEFLISGVQPETVCSDIGLCVYNGSSYMR 355
+ L++ QP+ +CS +GLC ++G+ +
Sbjct: 301 LDLLLAETQPKKICSQVGLCTFDGTRGVS 329
|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 | Back alignment and structure |
|---|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 | Back alignment and structure |
|---|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 | Back alignment and structure |
|---|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 | Back alignment and structure |
|---|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 | Back alignment and structure |
|---|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 | Back alignment and structure |
|---|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 | Back alignment and structure |
|---|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 | Back alignment and structure |
|---|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 | Back alignment and structure |
|---|
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 | Back alignment and structure |
|---|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 | Back alignment and structure |
|---|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 | Back alignment and structure |
|---|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 | Back alignment and structure |
|---|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 | Back alignment and structure |
|---|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 | Back alignment and structure |
|---|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 | Back alignment and structure |
|---|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 | Back alignment and structure |
|---|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 | Back alignment and structure |
|---|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 | Back alignment and structure |
|---|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 | Back alignment and structure |
|---|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 | Back alignment and structure |
|---|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 | Back alignment and structure |
|---|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 | Back alignment and structure |
|---|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 | Back alignment and structure |
|---|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 | Back alignment and structure |
|---|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 | Back alignment and structure |
|---|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 | Back alignment and structure |
|---|
| >1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 | Back alignment and structure |
|---|
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 | Back alignment and structure |
|---|
| >3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Length = 80 | Back alignment and structure |
|---|
| >3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum} Length = 108 | Back alignment and structure |
|---|
| >2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Length = 91 | Back alignment and structure |
|---|
| >2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A Length = 83 | Back alignment and structure |
|---|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 | Back alignment and structure |
|---|
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 | Back alignment and structure |
|---|
| >1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1 Length = 78 | Back alignment and structure |
|---|
| >4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A* Length = 83 | Back alignment and structure |
|---|
| >1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3 Length = 81 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 355 | |||
| 3psg_A | 370 | Pepsinogen; hydrolase(acid proteinase zymogen); 1. | 100.0 | |
| 2x0b_A | 383 | Renin; hydrolase-hormone complex, hydrolase hormon | 100.0 | |
| 1qdm_A | 478 | Prophytepsin; aspartic proteinases, saposin-like d | 100.0 | |
| 3cms_A | 323 | Chymosin B; hydrolase, acid proteinase; 2.00A {Bos | 100.0 | |
| 4aa9_A | 320 | Chymosin; hydrolase, aspartic peptidase, rennet; H | 100.0 | |
| 1tzs_A | 351 | Cathepsin E; hydrolase, aspartic protease, activat | 100.0 | |
| 3k1w_A | 341 | Renin; protease, alternative splicing, aspartyl pr | 100.0 | |
| 1dpj_A | 329 | Proteinase A; proteinase A, hydrolase-hydrolase in | 100.0 | |
| 3qvc_A | 451 | Histo-aspartic protease; HAP, plasmepsin, zymogen, | 100.0 | |
| 1miq_A | 375 | Plasmepsin; aspartic proteinase zymogen, domain op | 100.0 | |
| 1htr_B | 329 | Gastricsin; aspartyl protease; 1.62A {Homo sapiens | 100.0 | |
| 1am5_A | 324 | Pepsin, acid proteinase; aspartyl protease, hydrol | 100.0 | |
| 2bju_A | 453 | Plasmepsin II; aspartic proteinase, drug design, m | 100.0 | |
| 1b5f_A | 239 | Protein (cardosin A); hydrolase, aspartic proteina | 100.0 | |
| 1mpp_A | 361 | Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu | 100.0 | |
| 1yg9_A | 330 | Aspartic protease BLA G 2; allegren, hydrolase, al | 100.0 | |
| 2apr_A | 325 | Rhizopuspepsin; hydrolase (aspartic proteinase); 1 | 100.0 | |
| 3fv3_A | 339 | SAPP1P-secreted aspartic protease 1; secreted aspa | 100.0 | |
| 3c9x_A | 329 | Trichoderma reesei aspartic protease; aspartic pro | 100.0 | |
| 1oew_A | 329 | Endothiapepsin; hydrolase, aspartic proteinase mec | 100.0 | |
| 1j71_A | 334 | Candidapepsin, aspartic proteinase; candida tropic | 100.0 | |
| 2qzx_A | 342 | Candidapepsin-5; aspartic proteinase, aspartyl pro | 100.0 | |
| 3pvk_A | 342 | Candidapepsin-2; hydrolase; 1.27A {Candida albican | 100.0 | |
| 1ibq_A | 325 | Aspergillopepsin; aspartic proteinase, hydrolase; | 100.0 | |
| 1izd_A | 323 | Aspartic proteinase; sugar binding, acid protease, | 100.0 | |
| 1bxo_A | 323 | Protein (penicillopepsin); hydrolase, phosphonate | 100.0 | |
| 1wkr_A | 340 | Polyporopepsin; hydrolase, hydrolase-hydrolase inh | 100.0 | |
| 3lpj_A | 455 | Beta-secretase 1; alzheimer'S, aspartyl protease, | 100.0 | |
| 2ewy_A | 383 | Beta-secretase 2; BACE2, aspartic protease, hydrol | 100.0 | |
| 3vf3_A | 402 | Beta-secretase 1; structure-based drug design, hyd | 100.0 | |
| 2qp8_A | 395 | Beta-secretase 1; BACE1, protease, alternative spl | 100.0 | |
| 3aup_A | 403 | SBG7S, BG, basic 7S globulin; pepsin-like fold, pl | 100.0 | |
| 3vla_A | 413 | EDGP; extracellular, inhibitor, plant protein; HET | 100.0 | |
| 1t6e_X | 381 | Xylanase inhibitor; two beta-barrel domain structu | 100.0 | |
| 1lya_B | 241 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 100.0 | |
| 1lya_A | 97 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 99.93 | |
| 1b5f_B | 87 | Protein (cardosin A); hydrolase, aspartic proteina | 95.85 | |
| 2i1a_A | 148 | DNA damage-inducible protein DDI1; acid protease f | 94.87 | |
| 3s8i_A | 148 | Protein DDI1 homolog 1; protease, structural genom | 92.13 | |
| 2hs1_A | 99 | HIV-1 protease; ultra-high resolution active site | 85.14 | |
| 3vcm_P | 43 | Prorenin; aspartic proteases, hydrolase; HET: NAG; | 82.62 | |
| 1fmb_A | 104 | EIAV protease; hydrolase (acid proteinase), RNA-di | 82.46 | |
| 3liy_A | 116 | Protease; hydrolase, hydrolase-hydrolase inhibitor | 82.03 | |
| 3ec0_A | 99 | Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 | 80.81 |
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-63 Score=466.73 Aligned_cols=311 Identities=34% Similarity=0.637 Sum_probs=273.4
Q ss_pred eEEEeeeeeechhhhHHhhhhhhhhhcccc------c-CC--CCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCC
Q 018462 32 LLRIQLKKRQLGINTINAARLITKNEVHNR------F-NH--PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSS 102 (355)
Q Consensus 32 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~~~------~-~~--~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~ 102 (355)
++||||+|.++.|+.+++.+..++..+.++ + .. .....+||.|+.|.+|+++|+||||||+|+|+|||||+
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs 80 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhhhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCC
Confidence 479999999999999888776544322111 1 11 13567999999999999999999999999999999999
Q ss_pred ceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEEeEEEeeeeeeeeeecCcEEEEEEecCCcccccc
Q 018462 103 NLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 182 (355)
Q Consensus 103 ~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~ 182 (355)
++||+|..|. +..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|+|++..+++|.||++....+..+...
T Consensus 81 ~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~ 159 (370)
T 3psg_A 81 NLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYA 159 (370)
T ss_dssp CEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGC
T ss_pred ccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccC
Confidence 9999999996 668999999999999999999999999999999999999999999999999999999988766567777
Q ss_pred ccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEE
Q 018462 183 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIK 262 (355)
Q Consensus 183 ~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~ 262 (355)
.++||||||++..+.....|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.
T Consensus 160 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~ 237 (370)
T 3psg_A 160 PFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQIT 237 (370)
T ss_dssp SCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTEEEE
T ss_pred CccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccceeEEE
Confidence 89999999999988877889999999999999999999999862 2389999999999999999999999999999999
Q ss_pred EeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC----ceEEEeCCc------eecccCCEEEEEecC
Q 018462 263 VGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE----GIVSMQCKT------VVFEYGNMIWEFLIS 332 (355)
Q Consensus 263 ~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~v~C~~------i~~~fg~~~~~~~~~ 332 (355)
+++|+++++.+. +..++.|+|||||+++++|.+++++|.+++++. |.|.+||+. +.|.|||.+|+||++
T Consensus 238 l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~ 316 (370)
T 3psg_A 238 LDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPS 316 (370)
T ss_dssp ECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHH
T ss_pred EeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEEEECHH
Confidence 999999998775 567889999999999999999999999999884 789999984 789999999999999
Q ss_pred CcCccccccccCceEeCC
Q 018462 333 GVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 333 ~~~~~~~~~~~~~C~~~~ 350 (355)
++.-. +.+.|+++.
T Consensus 317 ~yi~~----~~~~C~~~~ 330 (370)
T 3psg_A 317 AYILQ----DDDSCTSGF 330 (370)
T ss_dssp HHEEE----CSSCEEESE
T ss_pred Hhccc----CCCEEEEEE
Confidence 98322 456798653
|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} | Back alignment and structure |
|---|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 | Back alignment and structure |
|---|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A | Back alignment and structure |
|---|
| >4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A | Back alignment and structure |
|---|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... | Back alignment and structure |
|---|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* | Back alignment and structure |
|---|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* | Back alignment and structure |
|---|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* | Back alignment and structure |
|---|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A | Back alignment and structure |
|---|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... | Back alignment and structure |
|---|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* | Back alignment and structure |
|---|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* | Back alignment and structure |
|---|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A | Back alignment and structure |
|---|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* | Back alignment and structure |
|---|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* | Back alignment and structure |
|---|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... | Back alignment and structure |
|---|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} | Back alignment and structure |
|---|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* | Back alignment and structure |
|---|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* | Back alignment and structure |
|---|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A | Back alignment and structure |
|---|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* | Back alignment and structure |
|---|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... | Back alignment and structure |
|---|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... | Back alignment and structure |
|---|
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} | Back alignment and structure |
|---|
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A | Back alignment and structure |
|---|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A | Back alignment and structure |
|---|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* | Back alignment and structure |
|---|
| >1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* | Back alignment and structure |
|---|
| >1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... | Back alignment and structure |
|---|
| >3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens} | Back alignment and structure |
|---|
| >1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* | Back alignment and structure |
|---|
| >3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* | Back alignment and structure |
|---|
| >3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 355 | ||||
| d1qdma2 | 337 | b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase | 2e-66 | |
| d1smra_ | 335 | b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu | 2e-63 | |
| g1b5f.1 | 326 | b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin | 4e-63 | |
| g1htr.1 | 372 | b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens | 1e-61 | |
| d1dpja_ | 329 | b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha | 1e-60 | |
| d1am5a_ | 324 | b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo | 2e-60 | |
| g1lya.1 | 338 | b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) | 3e-60 | |
| d1hrna_ | 337 | b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho | 7e-60 | |
| d1mppa_ | 357 | b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] | 7e-59 | |
| d2qp8a1 | 387 | b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum | 2e-56 | |
| d3cmsa_ | 323 | b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos | 3e-55 | |
| d2bjua1 | 329 | b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad | 8e-54 | |
| d3psga_ | 370 | b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI | 1e-51 | |
| d2apra_ | 325 | b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus | 2e-50 | |
| d1eaga_ | 342 | b.50.1.2 (A:) Acid protease {Yeast (Candida albica | 4e-50 | |
| d1miqa_ | 373 | b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e | 6e-50 | |
| d1wkra_ | 340 | b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo | 2e-49 | |
| d1j71a_ | 334 | b.50.1.2 (A:) Acid protease {Yeast (Candida tropic | 6e-48 | |
| d1oewa_ | 330 | b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung | 2e-47 | |
| d1izea_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o | 2e-40 | |
| d1bxoa_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Penicillium j | 2e-34 | |
| d1t6ex_ | 381 | b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr | 1e-31 | |
| d1nkla_ | 78 | a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [Tax | 8e-13 | |
| d2gtga1 | 78 | a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) | 3e-12 | |
| d1of9a_ | 77 | a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica | 6e-12 | |
| d1qdma1 | 104 | a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Horde | 3e-11 | |
| d1n69a_ | 78 | a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [Tax | 6e-08 | |
| d1l9la_ | 74 | a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Hom | 4e-05 |
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plant acid proteinase, phytepsin species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 211 bits (536), Expect = 2e-66
Identities = 144/241 (59%), Positives = 187/241 (77%)
Query: 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRAR 126
D+V L NY++AQY+GEIG+G+PPQ F+V+FDTGSSNLWVPS+KC FSI+CYLHSRY+A
Sbjct: 4 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAG 63
Query: 127 LSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDG 186
S TY K G P I YG+G I+G+FS+D+V +GD+++KDQEF+E TKE + FL +FDG
Sbjct: 64 ASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDG 123
Query: 187 ILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRG 246
ILGLGF++I+ G A P+WY M+ QG +S +FS WLN+ + GGEIIFGG D +H+ G
Sbjct: 124 ILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVG 183
Query: 247 SHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306
H YVP+T+KGYWQ +GD+L+ STGFC GC AI DSGTS+LAGPT ++ +IN IG
Sbjct: 184 EHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIG 243
Query: 307 A 307
A
Sbjct: 244 A 244
|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 | Back information, alignment and structure |
|---|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 | Back information, alignment and structure |
|---|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 | Back information, alignment and structure |
|---|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 | Back information, alignment and structure |
|---|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 | Back information, alignment and structure |
|---|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 | Back information, alignment and structure |
|---|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 | Back information, alignment and structure |
|---|
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 | Back information, alignment and structure |
|---|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 | Back information, alignment and structure |
|---|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 | Back information, alignment and structure |
|---|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 | Back information, alignment and structure |
|---|
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 | Back information, alignment and structure |
|---|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 | Back information, alignment and structure |
|---|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 | Back information, alignment and structure |
|---|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 | Back information, alignment and structure |
|---|
| >d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
| >d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]} Length = 78 | Back information, alignment and structure |
|---|
| >d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]} Length = 77 | Back information, alignment and structure |
|---|
| >d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 104 | Back information, alignment and structure |
|---|
| >d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]} Length = 78 | Back information, alignment and structure |
|---|
| >d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 74 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 355 | |||
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d1dpja_ | 329 | Acid protease {Baker's yeast (Saccharomyces cerevi | 100.0 | |
| d2apra_ | 325 | Acid protease {Bread mold (Rhizopus chinensis) [Ta | 100.0 | |
| d1smra_ | 335 | Chymosin (synonym: renin) {Mouse (Mus musculus) [T | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1oewa_ | 330 | Endothiapepsin {Chestnut blight fungus (Endothia p | 100.0 | |
| d1am5a_ | 324 | Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: | 100.0 | |
| d1hrna_ | 337 | Chymosin (synonym: renin) {Human (Homo sapiens) [T | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1j71a_ | 334 | Acid protease {Yeast (Candida tropicalis) [TaxId: | 100.0 | |
| d1eaga_ | 342 | Acid protease {Yeast (Candida albicans) [TaxId: 54 | 100.0 | |
| g1lya.1 | 338 | Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qdma2 | 337 | Plant acid proteinase, phytepsin {Barley (Hordeum | 100.0 | |
| g1b5f.1 | 326 | Plant acid proteinase, phytepsin {Cynara carduncul | 100.0 | |
| d2bjua1 | 329 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d3cmsa_ | 323 | Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId | 100.0 | |
| d1wkra_ | 340 | Acid protease {Irpex lacteus (Polyporus tulipifera | 100.0 | |
| d1izea_ | 323 | Acid protease {Fungus (Aspergillus oryzae) [TaxId: | 100.0 | |
| d1bxoa_ | 323 | Acid protease {Fungus (Penicillium janthinellum), | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 99.98 | |
| d1bxoa_ | 323 | Acid protease {Fungus (Penicillium janthinellum), | 84.26 | |
| d1izea_ | 323 | Acid protease {Fungus (Aspergillus oryzae) [TaxId: | 82.77 |
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} | Back information, alignment and structure |
|---|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} | Back information, alignment and structure |
|---|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} | Back information, alignment and structure |
|---|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} | Back information, alignment and structure |
|---|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} | Back information, alignment and structure |
|---|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} | Back information, alignment and structure |
|---|