Citrus Sinensis ID: 018484

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENKAPANNRPNSHNNVKRRKSPEPEEKSLVETNGEVEEKQPLV
cccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
cccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEcccccccccccc
MRHEEQarslfgvslsdrprwqQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGfttkqmvnpwKTYVKLSAVLMgshgltkgslaflnypaqimfKSTKVLPVMIMgafipglrrkypAHEYVAALLLVFGLILFTmadaqtspnfsLIGVLMISGALVMDSFLGNLQEViftvnpdttqMEMLFCSTVvglpfllvpmILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIftkplteqhgTGLLLIAMGIILKmlpenkapannrpnshnnvkrrkspepeekslvetngeveekqplv
mrheeqarslfgvslsdrprWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENKapannrpnshnnvkrrkspepeekslvetngeveekqplv
MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENKAPANNRPNSHNNVKRRKSPEPEEKSLVETNGEVEEKQPLV
**********FGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKML********************************************
******A****GVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILK******************************************QPL*
*********LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENKAPA*************************************
****EQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENK****************************************
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPENKAPANNRPNSHNNVKRRKSPEPEEKSLVETNGEVEEKQPLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
Q29Q28345 UDP-galactose/UDP-glucose yes no 0.954 0.982 0.807 1e-156
Q9LDX3349 UDP-galactose/UDP-glucose no no 0.954 0.971 0.808 1e-156
Q922Q5369 Adenosine 3'-phospho 5'-p no no 0.929 0.894 0.362 4e-48
Q5R831401 Adenosine 3'-phospho 5'-p yes no 0.850 0.753 0.372 2e-47
Q9H1N7401 Adenosine 3'-phospho 5'-p yes no 0.850 0.753 0.372 3e-47
Q7Q5D4377 Adenosine 3'-phospho 5'-p yes no 0.876 0.824 0.344 3e-43
Q9VVD9396 Adenosine 3'-phospho 5'-p yes no 0.898 0.805 0.338 1e-42
Q29EY2392 Adenosine 3'-phospho 5'-p yes no 0.895 0.811 0.340 3e-42
Q17CE7382 Adenosine 3'-phospho 5'-p N/A no 0.802 0.746 0.368 5e-42
Q61LC0363 Adenosine 3'-phospho 5'-p N/A no 0.918 0.898 0.311 1e-40
>sp|Q29Q28|UTR2_ARATH UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1 Back     alignment and function desciption
 Score =  551 bits (1421), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/343 (80%), Positives = 308/343 (89%), Gaps = 4/343 (1%)

Query: 4   EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGF 63
           EEQ RSLFG+SLSD+P WQQFLIC+SGFFFGYLVNG+CEEYVYNRLQFS+GWYFTF+QGF
Sbjct: 3   EEQTRSLFGISLSDKPTWQQFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQGF 62

Query: 64  VYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPV 123
           VYL LIYLQGFTTK +VNP +TYVKLSAVLMGSHGLTKGSLA+LNYPAQIMFKSTKVLPV
Sbjct: 63  VYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPV 122

Query: 124 MIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSF 183
           MIMGAFIPGLRRKYP HEY++A LLV GLILFT+ADAQ SPNFS+IG++MI+GAL+MD+F
Sbjct: 123 MIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFSMIGIMMITGALIMDAF 182

Query: 184 LGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLV 243
           LGNLQE IFT+NP+TTQMEMLFCSTVVGLPFL VPM+LTGE+ RAW +C+QH YVYGVLV
Sbjct: 183 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQHPYVYGVLV 242

Query: 244 FEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIA 303
           FEAMATF+GQVSVLSLIALFGAATTA+ITTARK VTL LSYLIFTKPLTEQHG+GLLLIA
Sbjct: 243 FEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLLLSYLIFTKPLTEQHGSGLLLIA 302

Query: 304 MGIILKMLP-ENKAPAN--NRPNSHNNVKRRKSPEPEE-KSLV 342
           MGI+LKM+P ++KAPA    RP            E EE KSLV
Sbjct: 303 MGIVLKMVPMDSKAPAKIPARPAVRIAGGDGDREEDEERKSLV 345
Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LDX3|UTR4_ARATH UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1 Back     alignment and function description
>sp|Q922Q5|S35B3_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Mus musculus GN=Slc35b3 PE=2 SV=1 Back     alignment and function description
>sp|Q5R831|S35B3_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1 Back     alignment and function description
>sp|Q9H1N7|S35B3_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1 Back     alignment and function description
>sp|Q7Q5D4|S35B3_ANOGA Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Anopheles gambiae GN=Papst2 PE=3 SV=4 Back     alignment and function description
>sp|Q9VVD9|S35B3_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2 Back     alignment and function description
>sp|Q29EY2|S35B3_DROPS Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila pseudoobscura pseudoobscura GN=Papst2 PE=3 SV=2 Back     alignment and function description
>sp|Q17CE7|S35B3_AEDAE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Aedes aegypti GN=Papst2 PE=3 SV=1 Back     alignment and function description
>sp|Q61LC0|S35B3_CAEBR Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis briggsae GN=pst-2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
225426765350 PREDICTED: adenosine 3'-phospho 5'-phosp 0.983 0.997 0.851 1e-166
225453883348 PREDICTED: adenosine 3'-phospho 5'-phosp 0.980 1.0 0.825 1e-165
356532050358 PREDICTED: adenosine 3'-phospho 5'-phosp 1.0 0.991 0.824 1e-165
356568332358 PREDICTED: adenosine 3'-phospho 5'-phosp 1.0 0.991 0.821 1e-164
449452374346 PREDICTED: UDP-galactose/UDP-glucose tra 0.974 1.0 0.811 1e-163
357507121360 Adenosine 3'-phospho 5'-phosphosulfate t 1.0 0.986 0.808 1e-162
356532052371 PREDICTED: adenosine 3'-phospho 5'-phosp 1.0 0.956 0.795 1e-162
356568334371 PREDICTED: adenosine 3'-phospho 5'-phosp 1.0 0.956 0.792 1e-162
255541442350 Adenosine 3'-phospho 5'-phosphosulfate t 0.974 0.988 0.821 1e-160
224127530359 predicted protein [Populus trichocarpa] 0.997 0.986 0.802 1e-160
>gi|225426765|ref|XP_002282676.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|297742604|emb|CBI34753.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/356 (85%), Positives = 322/356 (90%), Gaps = 7/356 (1%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M+ EEQARSLFG+SLSDRP+WQQFLICSSGFFFGYL+NGICEEYVYNRL+FSYGWYFTF+
Sbjct: 1   MKGEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLINGICEEYVYNRLKFSYGWYFTFI 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFTTKQM NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKV
Sbjct: 61  QGFVYLALIYLQGFTTKQMSNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEYV+A+LLV GLILFT+ADAQTSPNFS IGVLMISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPFHEYVSAVLLVVGLILFTLADAQTSPNFSSIGVLMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYG 240
           DSFLGNLQE IFT+NP+TTQMEMLFCSTVVG PFLLVPMILTGEL +AWNSC QH YVYG
Sbjct: 181 DSFLGNLQEAIFTMNPETTQMEMLFCSTVVGFPFLLVPMILTGELFKAWNSCLQHPYVYG 240

Query: 241 VLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLL 300
           VLVFEAMATFVGQVSVLSLIA+FGAATTAMITTARKAVTL LSY+IFTKPLTEQHGTGLL
Sbjct: 241 VLVFEAMATFVGQVSVLSLIAMFGAATTAMITTARKAVTLLLSYMIFTKPLTEQHGTGLL 300

Query: 301 LIAMGIILKMLPENKAPANNRPNSHNNVKRRKSPEPEEKSLVET-NGEVEEKQPLV 355
           LIAMGIILKMLP+ +AP   RP S       K     E++LVE    E EEKQPLV
Sbjct: 301 LIAMGIILKMLPDTQAP--KRPTSSTAKPSSKG----ERALVEKMRDEGEEKQPLV 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225453883|ref|XP_002273090.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|296089139|emb|CBI38842.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356532050|ref|XP_003534587.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356568332|ref|XP_003552365.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449452374|ref|XP_004143934.1| PREDICTED: UDP-galactose/UDP-glucose transporter 2-like [Cucumis sativus] gi|449526419|ref|XP_004170211.1| PREDICTED: UDP-galactose/UDP-glucose transporter 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357507121|ref|XP_003623849.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula] gi|124360233|gb|ABN08246.1| Solute carrier family 35 member B3, related [Medicago truncatula] gi|355498864|gb|AES80067.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|356532052|ref|XP_003534588.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356568334|ref|XP_003552366.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|255541442|ref|XP_002511785.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223548965|gb|EEF50454.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127530|ref|XP_002320097.1| predicted protein [Populus trichocarpa] gi|222860870|gb|EEE98412.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
TAIR|locus:2195032349 AT1G12600 "AT1G12600" [Arabido 0.954 0.971 0.808 7.1e-148
ZFIN|ZDB-GENE-060312-46386 slc35b3 "solute carrier family 0.864 0.795 0.393 1.9e-51
UNIPROTKB|F1P4W7387 SLC35B3 "Uncharacterized prote 0.898 0.824 0.384 6.5e-51
MGI|MGI:1913978369 Slc35b3 "solute carrier family 0.929 0.894 0.362 9.5e-50
RGD|1307183369 Slc35b3 "solute carrier family 0.929 0.894 0.362 9.5e-50
UNIPROTKB|E2RJI8369 SLC35B3 "Uncharacterized prote 0.850 0.818 0.375 1.2e-49
UNIPROTKB|F1RV99369 SLC35B3 "Uncharacterized prote 0.850 0.818 0.375 1.5e-49
UNIPROTKB|E1BLS0430 SLC35B3 "Uncharacterized prote 0.892 0.737 0.36 8.5e-49
UNIPROTKB|Q9H1N7401 SLC35B3 "Adenosine 3'-phospho 0.850 0.753 0.372 1.4e-48
UNIPROTKB|Q7Q5D4377 Papst2 "Adenosine 3'-phospho 5 0.853 0.803 0.362 1e-45
TAIR|locus:2195032 AT1G12600 "AT1G12600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
 Identities = 278/344 (80%), Positives = 303/344 (88%)

Query:     4 EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGF 63
             EEQ   LFG+ LSD+PRWQQFLICSSGFFFGYLVNGICEEYVYNRL+FSYGWYFTF QG 
Sbjct:     6 EEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQGL 65

Query:    64 VYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPV 123
             VY+ LIY+ GF TKQMVNPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQIMFKSTKVLPV
Sbjct:    66 VYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPV 125

Query:   124 MIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSF 183
             M+MGAFIPGLRRKYP HEY++A+LLV GLILFT+ADA TSPNFS+IGV+MISGAL+MD+F
Sbjct:   126 MVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMDAF 185

Query:   184 LGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLYVYGVLV 243
             LGNLQE IFT+NP+TTQMEMLFCSTVVGLPFLL PMILTGEL  AWNSC+QH YVYGVLV
Sbjct:   186 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYGVLV 245

Query:   244 FEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIA 303
             FEAMATF+GQVSVLSLIALFGAATTAMITTARKAVTL LSYLIFTKPLTEQHGTGLLLI 
Sbjct:   246 FEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGTGLLLIF 305

Query:   304 MGIILKMLPE-NKAPANN----RPNSHNNVKRRKSPEPEEKSLV 342
             MGIILKM+P+ N  P ++     P     VK  K  + E + LV
Sbjct:   306 MGIILKMVPDPNPNPKSSGSGQTPGKLERVKFEKEDDEESRPLV 349
GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0055085 "transmembrane transport" evidence=IEA
ZFIN|ZDB-GENE-060312-46 slc35b3 "solute carrier family 35, member B3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P4W7 SLC35B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1913978 Slc35b3 "solute carrier family 35, member B3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307183 Slc35b3 "solute carrier family 35, member B3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RJI8 SLC35B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RV99 SLC35B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BLS0 SLC35B3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H1N7 SLC35B3 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q7Q5D4 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q29Q28UTR2_ARATHNo assigned EC number0.80750.95490.9826yesno
Q7Q5D4S35B3_ANOGANo assigned EC number0.34460.87600.8249yesno
Q9LDX3UTR4_ARATHNo assigned EC number0.80810.95490.9713nono
Q9VVD9S35B3_DROMENo assigned EC number0.33810.89850.8055yesno
Q29EY2S35B3_DROPSNo assigned EC number0.34020.89570.8112yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
pfam08449303 pfam08449, UAA, UAA transporter family 2e-87
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 6e-09
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 5e-06
>gnl|CDD|219846 pfam08449, UAA, UAA transporter family Back     alignment and domain information 
 Score =  265 bits (679), Expect = 2e-87
 Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 15/306 (4%)

Query: 24  FLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYLQGFTT---KQM 79
           FLIC SG F GY  NG+ +E +  R   S +G   TF Q     ++  L        K  
Sbjct: 1   FLICISGIFGGYCSNGVLQELIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPR 60

Query: 80  VNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPA 139
             P KTYV + A    S  L   +L +++YP  ++FKS K++PVMI+G  I    ++Y +
Sbjct: 61  KIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILI--YGKRYSS 118

Query: 140 HEYVAALLLVFGLILFTMADAQTSPNFSL------IGVLMISGALVMDSFLGNLQEVIFT 193
            +Y++ALL+  G+I+FT+A A+ S N  L      +G+ ++ GAL+MD+  GN QE ++ 
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 194 VNPDTTQMEMLFCSTVVGLPFLLVPMILTGE--LVRAWNSCSQHLYVYGVLVFEAMATFV 251
                   EM+F S ++ LPF L+ ++      L  A + C +H  V   L+  ++  +V
Sbjct: 179 KYG-KHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYV 237

Query: 252 GQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKML 311
           GQ  V  LI+ FGA T  ++TT RK V+L LS L+F  PLT Q   G LL+ +GI L   
Sbjct: 238 GQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAY 297

Query: 312 PENKAP 317
            + K  
Sbjct: 298 LKKKKA 303

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
KOG1582367 consensus UDP-galactose transporter related protei 100.0
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 100.0
KOG1580337 consensus UDP-galactose transporter related protei 100.0
KOG1581327 consensus UDP-galactose transporter related protei 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 100.0
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 100.0
KOG1443349 consensus Predicted integral membrane protein [Fun 99.96
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.94
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.92
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.92
PLN00411358 nodulin MtN21 family protein; Provisional 99.9
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.88
PRK11689295 aromatic amino acid exporter; Provisional 99.87
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.87
PRK10532293 threonine and homoserine efflux system; Provisiona 99.86
PRK11272292 putative DMT superfamily transporter inner membran 99.85
PRK15430296 putative chloramphenical resistance permease RarD; 99.82
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.77
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.74
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.73
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.72
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.7
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.68
KOG3912372 consensus Predicted integral membrane protein [Gen 99.66
KOG2765416 consensus Predicted membrane protein [Function unk 99.61
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.58
KOG2766336 consensus Predicted membrane protein [Function unk 99.56
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.52
KOG4510346 consensus Permease of the drug/metabolite transpor 99.42
COG2962293 RarD Predicted permeases [General function predict 99.35
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.32
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 98.81
PRK15430 296 putative chloramphenical resistance permease RarD; 98.67
COG2510140 Predicted membrane protein [Function unknown] 98.66
TIGR00688256 rarD rarD protein. This uncharacterized protein is 98.62
KOG4314290 consensus Predicted carbohydrate/phosphate translo 98.56
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 98.56
PF13536113 EmrE: Multidrug resistance efflux transporter 98.52
PF06800269 Sugar_transport: Sugar transport protein; InterPro 98.38
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.31
PF13536113 EmrE: Multidrug resistance efflux transporter 98.31
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.3
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.25
PLN00411 358 nodulin MtN21 family protein; Provisional 98.1
COG2962 293 RarD Predicted permeases [General function predict 97.99
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.96
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 97.93
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.81
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 97.68
TIGR00817 302 tpt Tpt phosphate/phosphoenolpyruvate translocator 97.68
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 97.67
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.61
PRK11272 292 putative DMT superfamily transporter inner membran 97.58
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 97.57
COG2510140 Predicted membrane protein [Function unknown] 97.49
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.47
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 97.43
PRK11689295 aromatic amino acid exporter; Provisional 97.42
PRK10532293 threonine and homoserine efflux system; Provisiona 97.4
PRK11453 299 O-acetylserine/cysteine export protein; Provisiona 97.4
PF07857254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 97.39
TIGR00776 290 RhaT RhaT L-rhamnose-proton symporter family prote 97.33
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.2
COG0697 292 RhaT Permeases of the drug/metabolite transporter 97.14
PRK13499 345 rhamnose-proton symporter; Provisional 97.12
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.03
PRK09541110 emrE multidrug efflux protein; Reviewed 96.88
COG2076106 EmrE Membrane transporters of cations and cationic 96.87
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 96.8
KOG2922335 consensus Uncharacterized conserved protein [Funct 96.72
PRK11431105 multidrug efflux system protein; Provisional 96.69
PRK10650109 multidrug efflux system protein MdtI; Provisional 96.65
PRK10650109 multidrug efflux system protein MdtI; Provisional 96.56
PRK09541110 emrE multidrug efflux protein; Reviewed 96.5
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 96.43
PRK13499345 rhamnose-proton symporter; Provisional 96.41
PRK11431105 multidrug efflux system protein; Provisional 96.31
COG2076106 EmrE Membrane transporters of cations and cationic 96.15
KOG4510 346 consensus Permease of the drug/metabolite transpor 95.96
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 95.93
KOG2765 416 consensus Predicted membrane protein [Function unk 95.87
PF06800 269 Sugar_transport: Sugar transport protein; InterPro 95.69
COG3238150 Uncharacterized protein conserved in bacteria [Fun 95.42
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 94.75
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 94.59
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 94.04
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 93.85
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 93.64
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 92.81
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 92.68
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 92.39
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 91.77
KOG1581 327 consensus UDP-galactose transporter related protei 89.41
COG4975 288 GlcU Putative glucose uptake permease [Carbohydrat 88.69
KOG1580 337 consensus UDP-galactose transporter related protei 88.45
KOG3912 372 consensus Predicted integral membrane protein [Gen 87.2
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 86.43
PF07168 336 Ureide_permease: Ureide permease; InterPro: IPR009 85.03
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-51  Score=364.39  Aligned_cols=307  Identities=52%  Similarity=0.901  Sum_probs=289.5

Q ss_pred             cccc--ceEEeeeCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC-chhHHHHHHHHHHHH--HHHHhcccCCC
Q 018484            4 EEQA--RSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV--LIYLQGFTTKQ   78 (355)
Q Consensus         4 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~i~~~~~f~-~p~~lt~~Q~~~~~~--~~~~~~~~~~~   78 (355)
                      |||+  ++++|++.++.|+|+|+++|..|+|+.|+.||++||+|++..+|+ ++|.+|++|++++..  +.++..+++++
T Consensus        22 ~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~  101 (367)
T KOG1582|consen   22 EEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR  101 (367)
T ss_pred             ccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc
Confidence            7787  669999999999999999999999999999999999999999996 999999999999854  44567788888


Q ss_pred             CCCchHHHHHHHHHHHhhHHHHHHHhhCCChhHHHHHhhcchHHHHHHHhhhcCCccccChhHHHHHHHHHHHHHHHhcc
Q 018484           79 MVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA  158 (355)
Q Consensus        79 ~~~~~~~~~~~s~~~~~~~~l~~~sL~~~s~~~~~v~ks~~pi~v~l~~~l~~gl~~~~s~~~~~~l~li~~Gv~l~~~~  158 (355)
                      +..|||.|..++++..++++++|.|+.|+|+|++.++|+|+.+|||+.+.++.  ++|+++.++.+..++++|+++++.+
T Consensus       102 r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIq--GkRY~v~d~~aA~lm~lGli~FTLA  179 (367)
T KOG1582|consen  102 RVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQ--GKRYGVHDYIAAMLMSLGLIWFTLA  179 (367)
T ss_pred             eecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeec--cccccHHHHHHHHHHHHHHHhhhhc
Confidence            89999999999999999999999999999999999999999999999999995  6899999999999999999999999


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChhhHHHHHHHHhHHHHHHHHHhhchHHHHHHHHhhhhH-
Q 018484          159 DAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTGELVRAWNSCSQHLY-  237 (355)
Q Consensus       159 ~~~~~~~~~~~G~~l~l~s~~~~a~~~v~~~~l~~~~~~~~~~~l~~~~~l~~~~~ll~~~~~~ge~~~~~~~~~~~~~-  237 (355)
                      |.+.+++|+..|+.++..|+++||+....||+.+++++. +..||++|+..++.++++.++..+||+..+|++..+||. 
T Consensus       180 Ds~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~-ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~  258 (367)
T KOG1582|consen  180 DSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPA-SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVR  258 (367)
T ss_pred             ccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCC-CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHh
Confidence            999999999999999999999999999999999998864 568999999999999998889999999999999988986 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhHHHHHHHHHHHHHhCCCcccchhhhHHHHHHHHHHHhccC
Q 018484          238 VYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPE  313 (355)
Q Consensus       238 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~svv~~~k~v~~i~ls~l~f~~~~t~~~~iG~~lv~~Gv~ly~~~k  313 (355)
                      ...+.++.++.+++|+.+....++.+||.+++.+++.||.+++++|+++|.+|+|.++.-|..+++.|+++..+.|
T Consensus       259 tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  259 TYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            6778888899999999999999999999999999999999999999999999999999999999999999998887

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.9 bits (126), Expect = 1e-07
 Identities = 50/338 (14%), Positives = 94/338 (27%), Gaps = 106/338 (31%)

Query: 4   EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGF 63
                 LF         W    + S           + +++V   L+ +Y +        
Sbjct: 61  VSGTLRLF---------W---TLLSKQ-------EEMVQKFVEEVLRINYKF-------- 93

Query: 64  VYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQI--MFKSTKVL 121
                          +++P KT  +            + S+    Y  Q   ++   +V 
Sbjct: 94  ---------------LMSPIKTEQR------------QPSMMTRMYIEQRDRLYNDNQVF 126

Query: 122 PVMIMGAFIPGLRRKYPAHEYVAAL--------LLVFG--------LILFTMADAQTSPN 165
                   +    R  P  +   AL        +L+ G        + L      +    
Sbjct: 127 AKY----NVS---RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179

Query: 166 FSLIGVLMISGALVM--DSFLGNLQEVIFTVNPDTTQMEMLFCSTVVGLPFLLVPMILTG 223
                +  ++       ++ L  LQ++++ ++P+ T            +   +    +  
Sbjct: 180 MDF-KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR----SDHSSNIKLRIH--SIQA 232

Query: 224 ELVRAWNSCSQHLYVYGVLVFEAMATFVGQVSVLSLIALFGAATTAMITTARKAVTLFLS 283
           EL R         Y   +LV          V        F  +   ++TT  K VT FLS
Sbjct: 233 ELRRLL---KSKPYENCLLVLL-------NVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282

Query: 284 YLIFT--------KPLTEQHGTGLLLIAMGIILKMLPE 313
               T          LT      LLL  +    + LP 
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.55
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.01
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 97.97
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 97.89
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
Probab=98.55  E-value=1.4e-07  Score=77.36  Aligned_cols=70  Identities=16%  Similarity=0.162  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHH-HhHHHHHHHHHHHHHhCCCcccchhhhHHHHHHHHHHHhccC
Q 018484          244 FEAMATFVGQVSVLSLIALFGAATTAMI-TTARKAVTLFLSYLIFTKPLTEQHGTGLLLIAMGIILKMLPE  313 (355)
Q Consensus       244 l~~~~~~l~~~~~~~~i~~~sa~t~svv-~~~k~v~~i~ls~l~f~~~~t~~~~iG~~lv~~Gv~ly~~~k  313 (355)
                      +..++..++++++...+++.++..+..+ ..+.++++.++|+++|||++|+.+++|++++++|+++.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3345566778889999999999988777 899999999999999999999999999999999999987543
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00