Citrus Sinensis ID: 018486

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
Protein Sequence
MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHccccccccccccccccccccccEEEEccccccccEEEcccEEEccccccEEEcccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHccEEEEEEEEEEEEEEEEcccccccHHHHHcccccccHHHHHHHHHHcccEEEEEEEEccEEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccHHHHHHHHHccccccEEEEEccHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEcccEEEEcccEEEcccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHccccccccccHHHHcccccccEEEEEcccccccccEccccEEEccccccEEccccccEEEccccccHHHHHHHHHHHccccccccccccHHHccccccHHHHHHHHHHHccccEEEEEEEEEEEccccEHHHHHHHHccccccHHHHHHHHHHcccEEEEEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccccccccHHHHHHHccccccEEEEEEEEHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccEEEEccccEEEEccccEEEEEEEEEccc
Coil and Loop (DISEMBL)
MENQIATTLRYSIQALGRGFDVTSDIRLLyckgapgsrlvhidedhhagdlvvsdgvlvpnvsvdiecskgnrsieripvcsfhemagyfneksgisgniplgsfnamfnftGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIrravpyswdppllASFIENYGTHIVTSITIGGRDVVYIRQhqssplsmmDIENYVKdigderfmdsksqssaaplkykdkdvTVIFRRRGGDDLEQSHAKWAETVQlapdvinmtfTPIVSLLEGVPGIKHLARAIELYLeykppiedlQYFLDyqiprvwapqhsniqrkepvcsslqfslmgpklyispdQVFFIFLKIFHFF
Flexible Loop (DISEMBL)
MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDiecskgnrsieripVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRravpyswdpplLASFIENYGTHIVTSITIGGRDVVYIRQHqssplsmmDIENYVKDIGDERFMdsksqssaaplkykdkdvTVIFRRRggddleqsHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Low Complexity Region (SEG)
MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVffiflkifhff
Disordered region (IsUnstruct)
*****ATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQ*****MMDIENYVK***********************KDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHF*
Disordered Region (DISOPRED)
**********YSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMA***************GSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVL***IR**VPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYI****************VKDIG************************************QSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHS********CSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Disordered Region (DISEMBL)
MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFM**********LKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Disordered Region (DISPRO)
*****ATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFM*********PLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQVFFIFLKIFHFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	355	2.2.26 [Sep-21-2011]
Q9C7N2	561	MACPF domain-containing p	yes	no	0.954	0.604	0.767	1e-155
Q9STW5	606	MACPF domain-containing p	no	no	0.926	0.542	0.447	4e-85
Q9SGN6	612	MACPF domain-containing p	no	no	0.935	0.542	0.433	1e-81
Q8L612	627	MACPF domain-containing p	no	no	0.954	0.540	0.397	9e-71

>sp|Q9C7N2|CAD1_ARATH MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1

 Score =  546 bits (1408), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 291/340 (85%), Gaps = 1/340 (0%)

Query: 5   IATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSV 64
           + TTLR +IQALGRGFDVTSD+RLLYCKGAPGSRLV I+E  +  DL +S G L+PNV  
Sbjct: 17  LTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNR-DLELSHGFLLPNVPA 75

Query: 65  DIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKS 124
           DI+CS+GN   +RI VCSFHEMA  FN +SG+ GNIPLG FNAMFN+TG WQ DAA+TKS
Sbjct: 76  DIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKS 135

Query: 125 LAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRD 184
           LA+VG FI LY VKLAKL LVL  EIRRAVP SWDP  LASFIENYGTHIVTS+TIGGRD
Sbjct: 136 LALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRD 195

Query: 185 VVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL 244
           VVYIRQHQSSPL + +IENYV D+   RF +++SQS   PLKYKDKD+TVIFRRRGGDDL
Sbjct: 196 VVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKDITVIFRRRGGDDL 255

Query: 245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLD 304
           EQSHA+WAETV  APD+INMTFTPIVSLLEGVPG++HL RAIELYLEYKPPIEDLQYFLD
Sbjct: 256 EQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLRHLTRAIELYLEYKPPIEDLQYFLD 315

Query: 305 YQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           YQI R WAP+ SN+QRKEPVCSSLQFSLMGPKL+IS DQV
Sbjct: 316 YQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKLFISADQV 355

Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9STW5|MACP2_ARATH MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana GN=At4g24290 PE=2 SV=1

 Score =  315 bits (806), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 161/360 (44%), Positives = 227/360 (63%), Gaps = 31/360 (8%)

Query: 12  SIQALGRGFDVTSDIRLLYCKG-APGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSK 70
           +I ++G G+D+  D+RL YCKG +  SRL+ I E     ++V+  G+ +PNVS  I+C K
Sbjct: 14  AIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVSKSIKCDK 73

Query: 71  GNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGN 130
           G R   R  +  F +MA  FN++  ++G IP G FNAMF F+ CWQ DAA TK+LA  G 
Sbjct: 74  GERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSSCWQKDAAYTKNLAFDGV 133

Query: 131 FISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQ 190
           FISLY V L K  ++LRE +++AVP +WDP  LA FI+ YGTHI+ S+ +GG+DV+Y +Q
Sbjct: 134 FISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVKMGGKDVIYAKQ 193

Query: 191 HQSSPLSMMDIENYVKDIGDERFMD---------------SKSQSSAAPLKYKD------ 229
             SS L   D++  +K++ D+RF++               SK ++    L++ D      
Sbjct: 194 QHSSKLQPEDLQKRLKEVADKRFVEASVVHNTGSERVQASSKVETKEQRLRFADTSSLGS 253

Query: 230 ----KDVTVIFRRRGGDDLEQ-SHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLAR 284
               +D   + +RRGG+D     H +W +TVQ+ PDVI+M+F PI SLL GVPG   L+ 
Sbjct: 254 YANKEDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPITSLLNGVPGSGFLSH 313

Query: 285 AIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNI----QRKEPVCSSLQFSLMGPKLYIS 340
           AI LYL YKPPIE+L  FL++Q+PR WAP  S +    QRK+  C+SLQFS  GPKLY++
Sbjct: 314 AINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQRKQQSCASLQFSFFGPKLYVN 373

Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SGN6|NSL1_ARATH MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana GN=NSL1 PE=1 SV=1

 Score =  303 bits (777), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/367 (43%), Positives = 225/367 (61%), Gaps = 35/367 (9%)

Query: 12  SIQALGRGFDVTSDIRLLYCKGAP-GSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSK 70
           ++  +G G+D+ SD+R   CK  P GSRLV ID   +  DL+   G++V NVS  I+C K
Sbjct: 18  AVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNR-DLIFPGGIVVNNVSSSIKCDK 76

Query: 71  GNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGN 130
           G R+  R  + SF++M+  FN+   +SG IP G FN MF F+ CW  DA++ K+LA  G 
Sbjct: 77  GERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAFSKCWPKDASSVKTLAYDGW 136

Query: 131 FISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQ 190
           FISLY V++ +  L LR+E++R VP SWD   LA FIE YGTH+V  +T+GG+DV++++Q
Sbjct: 137 FISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDVIHVKQ 196

Query: 191 HQSSPLSMMDIENYVKDIGDERF----MDSKSQ-------------------------SS 221
            + S     +I+  +K  GDERF    ++SKS                          SS
Sbjct: 197 MRKSNHEPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPKEENLLQWGLQPFGTSVSS 256

Query: 222 AAPLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKH 281
           A  +  K++++  +  RRGG DL QSH +W  TV  AP+VI+M F PI SLL G+PG   
Sbjct: 257 AVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCFVPITSLLSGLPGTGF 316

Query: 282 LARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSN----IQRKEPVCSSLQFSLMGPKL 337
           L+ A+ LYL YKPPIE+L  FL++Q+PR WAP + +    ++R +    SLQFSLMGPKL
Sbjct: 317 LSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGLRRSKQSSPSLQFSLMGPKL 376

Query: 338 YISPDQV 344
           Y++  +V
Sbjct: 377 YVNTSKV 383

Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana GN=At1g14780 PE=2 SV=1

 Score =  267 bits (682), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 152/382 (39%), Positives = 217/382 (56%), Gaps = 43/382 (11%)

Query: 1   MENQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGS----RLVHIDEDHHAGDLVVSDG 56
           M       +  ++++LG+GFD+T+D RL YCK   GS    RLV +D+  +    +   G
Sbjct: 1   MSRDGGDVIETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFG 60

Query: 57  VLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNF-TGCW 115
           V   NVS DI C KG R+  R  +  F++M+ YFN++S ++G IP G+FNA F F +G W
Sbjct: 61  VF-QNVSADINCDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSW 119

Query: 116 QADAAATKSLAMVGNFISLYKVKLAKLN-LVLREEIRRAVPYSWDPPLLASFIENYGTHI 174
             DAA  KSL +  + ++L+ + +   N L L + +R AVP SWDP LLA FIE YGTH+
Sbjct: 120 ATDAANVKSLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHV 179

Query: 175 VTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLK-------- 226
           +T +++GG+DVV +RQ +SS L    + +++ D+GD+ F  S   S+    K        
Sbjct: 180 ITGVSVGGQDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQ 239

Query: 227 ---------YKDKD--------------VTVIFRRRGGDDLEQSHAKWAETVQLAPDVIN 263
                    + DK               +TVI  +RGGD   +SH++W  TV   PD IN
Sbjct: 240 PKFPEAFNVFDDKQTVAFNNFSINSQNGITVICAKRGGDGRAKSHSEWLITVPDKPDAIN 299

Query: 264 MTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNIQ-RKE 322
             F PI SLL+ VPG   L+ A+ LYL YKPP+ DLQYFLD+  PR WAP H+++     
Sbjct: 300 FNFIPITSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFGAA 359

Query: 323 PVCSS----LQFSLMGPKLYIS 340
           P  +S    L  + MGPKLY++
Sbjct: 360 PNMASAYPALHINFMGPKLYVN 381

Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
255562552	559	conserved hypothetical protein [Ricinus	0.960	0.610	0.833	1e-166
224078988	557	predicted protein [Populus trichocarpa]	0.960	0.612	0.827	1e-165
224116508	557	predicted protein [Populus trichocarpa]	0.960	0.612	0.821	1e-164
297740573	1252	unnamed protein product [Vitis vinifera]	0.960	0.272	0.792	1e-159
359483794	577	PREDICTED: uncharacterized protein LOC10	0.960	0.590	0.792	1e-158
356555466	559	PREDICTED: uncharacterized protein LOC10	0.966	0.613	0.775	1e-156
356549168	559	PREDICTED: uncharacterized protein LOC10	0.966	0.613	0.761	1e-154
15809820	383	At1g29690/F15D2_24 [Arabidopsis thaliana	0.954	0.885	0.767	1e-153
18397204	561	MAC/Perforin domain-containing protein [	0.954	0.604	0.767	1e-153
297851386	561	hypothetical protein ARALYDRAFT_473172 [	0.954	0.604	0.755	1e-152

>gi|255562552|ref|XP_002522282.1| conserved hypothetical protein [Ricinus communis] gi|223538535|gb|EEF40140.1| conserved hypothetical protein [Ricinus communis]

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/342 (83%), Positives = 308/342 (90%), Gaps = 1/342 (0%)

Query: 3   NQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNV 62
           + + TTL  SIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDE  H  DL +SDGVLVPNV
Sbjct: 6   DALTTTLCNSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDE-QHTRDLQLSDGVLVPNV 64

Query: 63  SVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT 122
           SVDI+CS G RSI+RIPVC+FHEMAG FNEKSGISG+IPLGSFN MFNFTG WQ DAAAT
Sbjct: 65  SVDIDCSIGQRSIDRIPVCTFHEMAGRFNEKSGISGHIPLGSFNGMFNFTGSWQVDAAAT 124

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGG 182
           KSLAM+G FI LYKV+LAK+NLVL EEI+RAVPYSWDP  LASFIE+YGTHIVTS TIGG
Sbjct: 125 KSLAMIGYFIPLYKVQLAKVNLVLHEEIKRAVPYSWDPAALASFIESYGTHIVTSATIGG 184

Query: 183 RDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD 242
           RD VYIRQHQSS L + DIE+YVKDI D+RF ++KSQ SA PLKYKDKDVTVIFRRRGGD
Sbjct: 185 RDAVYIRQHQSSSLLVSDIESYVKDIADQRFQEAKSQLSAGPLKYKDKDVTVIFRRRGGD 244

Query: 243 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 302
           DLEQSHAKWAETVQLAPDVINMTFTPI+SLLEGV GIKHLARAI+LYLEYKPPIEDLQYF
Sbjct: 245 DLEQSHAKWAETVQLAPDVINMTFTPIISLLEGVTGIKHLARAIDLYLEYKPPIEDLQYF 304

Query: 303 LDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           LD+QI RVWAP+ +N+ RKEPVC SLQFSLMGPKLYISPDQV
Sbjct: 305 LDFQIARVWAPEQNNLLRKEPVCQSLQFSLMGPKLYISPDQV 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078988|ref|XP_002305709.1| predicted protein [Populus trichocarpa] gi|222848673|gb|EEE86220.1| predicted protein [Populus trichocarpa]

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/342 (82%), Positives = 306/342 (89%), Gaps = 1/342 (0%)

Query: 3   NQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNV 62
           + + TTL  SIQALGRGFDVTSDIRLLYCKGA GSRLVHID D H  DL +S GV++PNV
Sbjct: 6   DALTTTLCNSIQALGRGFDVTSDIRLLYCKGATGSRLVHID-DEHTRDLDISHGVVLPNV 64

Query: 63  SVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT 122
           S DI+CSK NRSIERIPVCSFHEMAG FNEKSGISG IPLGSFN MFNFTG WQ DAA T
Sbjct: 65  SFDIDCSKENRSIERIPVCSFHEMAGQFNEKSGISGRIPLGSFNGMFNFTGSWQVDAAGT 124

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGG 182
           KSLAMVG+FI LYKV++AK+NLVL EE++RAVP SWDP  LASFIE+YGTHIVTS TIGG
Sbjct: 125 KSLAMVGHFIPLYKVQIAKVNLVLLEEVKRAVPSSWDPASLASFIESYGTHIVTSATIGG 184

Query: 183 RDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD 242
           RDVVYIRQHQ+SPLS+ DIENYVKDI D+RF DS S S AAPLKYKDKDVTVIFRRRGGD
Sbjct: 185 RDVVYIRQHQASPLSVSDIENYVKDIADQRFQDSTSTSIAAPLKYKDKDVTVIFRRRGGD 244

Query: 243 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 302
           DLEQSHAKWAETVQLAPDVINMTFTPIVSLLE VPGIKHLARA++LYLEYKPPIEDLQYF
Sbjct: 245 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLERVPGIKHLARAVDLYLEYKPPIEDLQYF 304

Query: 303 LDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           LD+QI + WAP+ +N+QRKEPVC SLQFSLMGPKLYISPDQV
Sbjct: 305 LDFQIAKGWAPEQNNLQRKEPVCQSLQFSLMGPKLYISPDQV 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116508|ref|XP_002317318.1| predicted protein [Populus trichocarpa] gi|222860383|gb|EEE97930.1| predicted protein [Populus trichocarpa]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/342 (82%), Positives = 307/342 (89%), Gaps = 1/342 (0%)

Query: 3   NQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNV 62
           + + TTL  SIQALGRGFDVTSDIRLLYCKGA GSRLVHIDE+H A DL +S G+++P++
Sbjct: 6   DALTTTLCNSIQALGRGFDVTSDIRLLYCKGATGSRLVHIDEEH-ARDLDISHGLVLPSL 64

Query: 63  SVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT 122
           S DI+CS+  RS ERIPVCSFHEMAG FNEKSGIS  IPLGSFN MFNFTG WQ DAA T
Sbjct: 65  SFDIDCSQEKRSFERIPVCSFHEMAGLFNEKSGISERIPLGSFNGMFNFTGSWQVDAAGT 124

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGG 182
           KSLAMVG+FI LYKV++AK+NLVLREE++RAVPYSWDP  LASFIE+YGTHIVTS TIGG
Sbjct: 125 KSLAMVGHFIPLYKVQIAKVNLVLREEVKRAVPYSWDPASLASFIESYGTHIVTSATIGG 184

Query: 183 RDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD 242
           RDVVYIRQHQ+SPLS  DIENYVKDI D+RF DSK+ S AAPLKYKDKDVTVIFRRRGGD
Sbjct: 185 RDVVYIRQHQASPLSASDIENYVKDIADQRFQDSKNTSIAAPLKYKDKDVTVIFRRRGGD 244

Query: 243 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 302
           DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF
Sbjct: 245 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 304

Query: 303 LDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           LD+QI + WAP+ +N+ RKEPVC SLQFSLMGPKLYISPDQV
Sbjct: 305 LDFQIAKGWAPEQNNLLRKEPVCQSLQFSLMGPKLYISPDQV 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740573|emb|CBI30755.3| unnamed protein product [Vitis vinifera]

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/342 (79%), Positives = 303/342 (88%), Gaps = 1/342 (0%)

Query: 3   NQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNV 62
           N + TTL  SIQALGRGFDVTSDIRLLYCKGAPGSR V +DE++   DLVVSDGV++PNV
Sbjct: 24  NALITTLCNSIQALGRGFDVTSDIRLLYCKGAPGSRPVILDEEN-TRDLVVSDGVIIPNV 82

Query: 63  SVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT 122
           SVDIE S+G R+ E IPVC FHEMA +FNE SGISG+IPLGSFNAMFNFTG W  DAAAT
Sbjct: 83  SVDIEASRGKRTTESIPVCGFHEMAHHFNELSGISGSIPLGSFNAMFNFTGSWHVDAAAT 142

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGG 182
           KSLAMVG +I L+ V+LA  NLVLR+EI+RAVP++WDP  LASFIENYGTHIVTS TIGG
Sbjct: 143 KSLAMVGYYIPLFTVELANSNLVLRDEIKRAVPFTWDPTSLASFIENYGTHIVTSATIGG 202

Query: 183 RDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD 242
           RDVVY+RQHQ SPLS  DIENYVKDIGD+RF+D KSQ +AAPLKYKDKDVTVIFRRRGGD
Sbjct: 203 RDVVYVRQHQLSPLSSSDIENYVKDIGDQRFLDPKSQPTAAPLKYKDKDVTVIFRRRGGD 262

Query: 243 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 302
           DLEQSHAKW+ETV+LAPDVINM F PIVSLL+ VPG+KHLARA++LYLEYKPPIEDLQYF
Sbjct: 263 DLEQSHAKWSETVELAPDVINMKFVPIVSLLDSVPGLKHLARAVDLYLEYKPPIEDLQYF 322

Query: 303 LDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           L++QI RVWAP+ + +QRKEPVC SLQFSLMGPKLYISPDQV
Sbjct: 323 LEFQIARVWAPELNKLQRKEPVCPSLQFSLMGPKLYISPDQV 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483794|ref|XP_002264038.2| PREDICTED: uncharacterized protein LOC100244557 [Vitis vinifera]

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/342 (79%), Positives = 303/342 (88%), Gaps = 1/342 (0%)

Query: 3   NQIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNV 62
           N + TTL  SIQALGRGFDVTSDIRLLYCKGAPGSR V +DE++   DLVVSDGV++PNV
Sbjct: 24  NALITTLCNSIQALGRGFDVTSDIRLLYCKGAPGSRPVILDEEN-TRDLVVSDGVIIPNV 82

Query: 63  SVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT 122
           SVDIE S+G R+ E IPVC FHEMA +FNE SGISG+IPLGSFNAMFNFTG W  DAAAT
Sbjct: 83  SVDIEASRGKRTTESIPVCGFHEMAHHFNELSGISGSIPLGSFNAMFNFTGSWHVDAAAT 142

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGG 182
           KSLAMVG +I L+ V+LA  NLVLR+EI+RAVP++WDP  LASFIENYGTHIVTS TIGG
Sbjct: 143 KSLAMVGYYIPLFTVELANSNLVLRDEIKRAVPFTWDPTSLASFIENYGTHIVTSATIGG 202

Query: 183 RDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD 242
           RDVVY+RQHQ SPLS  DIENYVKDIGD+RF+D KSQ +AAPLKYKDKDVTVIFRRRGGD
Sbjct: 203 RDVVYVRQHQLSPLSSSDIENYVKDIGDQRFLDPKSQPTAAPLKYKDKDVTVIFRRRGGD 262

Query: 243 DLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYF 302
           DLEQSHAKW+ETV+LAPDVINM F PIVSLL+ VPG+KHLARA++LYLEYKPPIEDLQYF
Sbjct: 263 DLEQSHAKWSETVELAPDVINMKFVPIVSLLDSVPGLKHLARAVDLYLEYKPPIEDLQYF 322

Query: 303 LDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           L++QI RVWAP+ + +QRKEPVC SLQFSLMGPKLYISPDQV
Sbjct: 323 LEFQIARVWAPELNKLQRKEPVCPSLQFSLMGPKLYISPDQV 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555466|ref|XP_003546052.1| PREDICTED: uncharacterized protein LOC100789061 [Glycine max]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/348 (77%), Positives = 301/348 (86%), Gaps = 5/348 (1%)

Query: 1   MEN----QIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDG 56
           MEN     ++ TL  SIQALGRGFDVTSDIRLLYCKGAPGSRLVH+DEDH   +L +S  
Sbjct: 1   MENPTSDSLSATLGNSIQALGRGFDVTSDIRLLYCKGAPGSRLVHLDEDH-TKNLPLSHD 59

Query: 57  VLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQ 116
           +++PNVSVDI+ S G R IE  PVCSF EMA YFN +SGI+G IPLGSFN+MFNFTGCW 
Sbjct: 60  LVIPNVSVDIDWSPGKRGIEMTPVCSFLEMAKYFNGRSGIAGQIPLGSFNSMFNFTGCWM 119

Query: 117 ADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVT 176
           ADAAATKSLAMVG FI L +VKL KLNLVL +E++RAVPYSWDP  LASFIENYGTHIVT
Sbjct: 120 ADAAATKSLAMVGYFIPLVEVKLNKLNLVLTDEVKRAVPYSWDPTSLASFIENYGTHIVT 179

Query: 177 SITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIF 236
           S T+GGRDVVYIRQHQSS LS  DIENYVKDIGD+RF D K+ S   PLKYK+KDVTVIF
Sbjct: 180 SATVGGRDVVYIRQHQSSSLSASDIENYVKDIGDDRFRDVKNFSGPGPLKYKEKDVTVIF 239

Query: 237 RRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPI 296
           RRRGGDDLEQSH KWAETV+LAPD+INM FTPIVSLLEGVPG+K+LARAI+LYLEYKPPI
Sbjct: 240 RRRGGDDLEQSHTKWAETVKLAPDIINMNFTPIVSLLEGVPGVKYLARAIDLYLEYKPPI 299

Query: 297 EDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           EDLQYFLD+QI RVWAP+ +N+QRKEPVC SLQFSLMGPKL++SPDQV
Sbjct: 300 EDLQYFLDFQITRVWAPEQNNLQRKEPVCQSLQFSLMGPKLFVSPDQV 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549168|ref|XP_003542969.1| PREDICTED: uncharacterized protein LOC100807936 [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/348 (76%), Positives = 299/348 (85%), Gaps = 5/348 (1%)

Query: 1   MEN----QIATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDG 56
           MEN     ++ TL  SIQALGRGFDVTSDIRLLYCKGAPGSRLVH+DEDH   +L++S  
Sbjct: 1   MENPTSDSLSATLGNSIQALGRGFDVTSDIRLLYCKGAPGSRLVHVDEDH-TKNLLLSHD 59

Query: 57  VLVPNVSVDIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQ 116
           +++PNVS+D++ S G   IE  PV SFHEMA YFNE+SGI+G+IPLGSFN+MFNFTGCW 
Sbjct: 60  LVIPNVSMDVDWSPGKDGIETTPVYSFHEMAKYFNERSGITGHIPLGSFNSMFNFTGCWM 119

Query: 117 ADAAATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVT 176
           ADAAATKSLAMVG FI L +VKL KLNLVL +E++ AVPYSWDP  LASFIENYGTHIVT
Sbjct: 120 ADAAATKSLAMVGYFIPLVEVKLNKLNLVLTDEVKHAVPYSWDPTSLASFIENYGTHIVT 179

Query: 177 SITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIF 236
           S T+GGRDVVYIRQHQSS LS  DIE YVKDIGD+RF + K  S   PLKYK+KDVTVIF
Sbjct: 180 SATVGGRDVVYIRQHQSSSLSASDIETYVKDIGDDRFHNVKHFSGPGPLKYKEKDVTVIF 239

Query: 237 RRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPI 296
           RRRGGDDLEQSH KW ETV+LAPDVINM FTPIVSLLEGVPGIKHLARAI+LYL+YKPPI
Sbjct: 240 RRRGGDDLEQSHTKWVETVKLAPDVINMNFTPIVSLLEGVPGIKHLARAIDLYLQYKPPI 299

Query: 297 EDLQYFLDYQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           EDLQYFLD+QI +VWAP+ +N+QRKEPVC SLQFSLMGPKL++SPDQV
Sbjct: 300 EDLQYFLDFQITQVWAPEQNNLQRKEPVCQSLQFSLMGPKLFVSPDQV 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15809820|gb|AAL06838.1| At1g29690/F15D2_24 [Arabidopsis thaliana]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 290/340 (85%), Gaps = 1/340 (0%)

Query: 5   IATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSV 64
           + TTLR +IQALGRGFDVTSD+RLLYCKGAPGSRLV I+E  +  DL +S G L+PNV  
Sbjct: 17  LTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNR-DLELSHGFLLPNVPA 75

Query: 65  DIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKS 124
           DI+CS+GN   +RI VCSFHEMA  FN +SG+ GNIPLG FNAMFN+TG WQ DAA+TKS
Sbjct: 76  DIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKS 135

Query: 125 LAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRD 184
           LA+VG FI LY VKLAKL LVL  EIRRAVP SWDP  LASFIENYGTHIVTS+TIGGRD
Sbjct: 136 LALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRD 195

Query: 185 VVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL 244
           VVYIRQHQSSPL + +IENYV D+   RF +++SQS   PLKYKDKD+TVIFRRRGGDDL
Sbjct: 196 VVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKDITVIFRRRGGDDL 255

Query: 245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLD 304
           EQSHA+WAETV  APD+INMTFTPIVSLLEGVPG+ HL RAIELYLEYKPPIEDLQYFLD
Sbjct: 256 EQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLWHLTRAIELYLEYKPPIEDLQYFLD 315

Query: 305 YQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           YQI R WAP+ SN+QRKEPVCSSLQFSLMGPKL+IS DQV
Sbjct: 316 YQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKLFISADQV 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397204|ref|NP_564333.1| MAC/Perforin domain-containing protein [Arabidopsis thaliana] gi|75169350|sp|Q9C7N2.1|CAD1_ARATH RecName: Full=MACPF domain-containing protein CAD1; AltName: Full=Protein CONSTITUTIVELY ACTIVATED CELL DEATH 1; Short=Protein CAD1 gi|12323548|gb|AAG51760.1|AC068667_39 unknown protein; 124288-121737 [Arabidopsis thaliana] gi|18650618|gb|AAL75908.1| At1g29690/F15D2_24 [Arabidopsis thaliana] gi|133778820|gb|ABO38750.1| At1g29690 [Arabidopsis thaliana] gi|332192997|gb|AEE31118.1| MAC/Perforin domain-containing protein [Arabidopsis thaliana]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 291/340 (85%), Gaps = 1/340 (0%)

Query: 5   IATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSV 64
           + TTLR +IQALGRGFDVTSD+RLLYCKGAPGSRLV I+E  +  DL +S G L+PNV  
Sbjct: 17  LTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNR-DLELSHGFLLPNVPA 75

Query: 65  DIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKS 124
           DI+CS+GN   +RI VCSFHEMA  FN +SG+ GNIPLG FNAMFN+TG WQ DAA+TKS
Sbjct: 76  DIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKS 135

Query: 125 LAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRD 184
           LA+VG FI LY VKLAKL LVL  EIRRAVP SWDP  LASFIENYGTHIVTS+TIGGRD
Sbjct: 136 LALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRD 195

Query: 185 VVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL 244
           VVYIRQHQSSPL + +IENYV D+   RF +++SQS   PLKYKDKD+TVIFRRRGGDDL
Sbjct: 196 VVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKDITVIFRRRGGDDL 255

Query: 245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLD 304
           EQSHA+WAETV  APD+INMTFTPIVSLLEGVPG++HL RAIELYLEYKPPIEDLQYFLD
Sbjct: 256 EQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLRHLTRAIELYLEYKPPIEDLQYFLD 315

Query: 305 YQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           YQI R WAP+ SN+QRKEPVCSSLQFSLMGPKL+IS DQV
Sbjct: 316 YQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKLFISADQV 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851386|ref|XP_002893574.1| hypothetical protein ARALYDRAFT_473172 [Arabidopsis lyrata subsp. lyrata] gi|297339416|gb|EFH69833.1| hypothetical protein ARALYDRAFT_473172 [Arabidopsis lyrata subsp. lyrata]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 292/340 (85%), Gaps = 1/340 (0%)

Query: 5   IATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSV 64
           + TTLR +IQALGRGFDVTSD+RLLYCKGAPGSRLV I+E  +  DL +SDG L+PNV  
Sbjct: 17  LTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNR-DLELSDGYLLPNVPA 75

Query: 65  DIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKS 124
           DIECS+G    +RIPVCSFH+MA YFNE SG+ GNIPLG FNAMFN+TG WQ DAA+TKS
Sbjct: 76  DIECSRGRIGTQRIPVCSFHQMAEYFNEISGVKGNIPLGCFNAMFNYTGSWQVDAASTKS 135

Query: 125 LAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRD 184
           LA+VG FI LY+VKL  L L L  EIRRAVP SWDP  LASFIENYGTHIVTS+TIGGRD
Sbjct: 136 LALVGFFIPLYEVKLVNLKLDLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRD 195

Query: 185 VVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL 244
           VVYIRQHQSSPL + +IENYV ++ + RF +++SQS   PLKYKDKD+TVIFRRRGGDDL
Sbjct: 196 VVYIRQHQSSPLPVSEIENYVNEMTEHRFHEAESQSITGPLKYKDKDITVIFRRRGGDDL 255

Query: 245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLD 304
           EQSHA+WAETV  APD+INMTFTPIVSLL+GVPG++HL RAI+LYLEYKPPIEDLQYFLD
Sbjct: 256 EQSHARWAETVPAAPDIINMTFTPIVSLLKGVPGLQHLTRAIDLYLEYKPPIEDLQYFLD 315

Query: 305 YQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
           +QI R WAP+ SN+QRKEPVCSSLQFSLMGPKL+IS DQV
Sbjct: 316 FQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKLFISADQV 355

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
TAIR|locus:2013673	561	CAD1 "AT1G29690" [Arabidopsis	0.954	0.604	0.767	3.9e-140
TAIR|locus:2135912	606	AT4G24290 "AT4G24290" [Arabido	0.577	0.338	0.461	4e-81
TAIR|locus:2032532	612	NSL1 "AT1G28380" [Arabidopsis	0.619	0.359	0.433	6.6e-79
TAIR|locus:2006807	627	AT1G14780 "AT1G14780" [Arabido	0.574	0.325	0.431	7.7e-70

TAIR|locus:2013673 CAD1 "AT1G29690" [Arabidopsis thaliana (taxid:3702)]

 Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
 Identities = 261/340 (76%), Positives = 291/340 (85%)

Query:     5 IATTLRYSIQALGRGFDVTSDIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSV 64
             + TTLR +IQALGRGFDVTSD+RLLYCKGAPGSRLV I+E  +  DL +S G L+PNV  
Sbjct:    17 LTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNR-DLELSHGFLLPNVPA 75

Query:    65 DIECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKS 124
             DI+CS+GN   +RI VCSFHEMA  FN +SG+ GNIPLG FNAMFN+TG WQ DAA+TKS
Sbjct:    76 DIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKS 135

Query:   125 LAMVGNFISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRD 184
             LA+VG FI LY VKLAKL LVL  EIRRAVP SWDP  LASFIENYGTHIVTS+TIGGRD
Sbjct:   136 LALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRD 195

Query:   185 VVYIRQHQSSPLSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL 244
             VVYIRQHQSSPL + +IENYV D+   RF +++SQS   PLKYKDKD+TVIFRRRGGDDL
Sbjct:   196 VVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKDITVIFRRRGGDDL 255

Query:   245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIEDLQYFLD 304
             EQSHA+WAETV  APD+INMTFTPIVSLLEGVPG++HL RAIELYLEYKPPIEDLQYFLD
Sbjct:   256 EQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLRHLTRAIELYLEYKPPIEDLQYFLD 315

Query:   305 YQIPRVWAPQHSNIQRKEPVCSSLQFSLMGPKLYISPDQV 344
             YQI R WAP+ SN+QRKEPVCSSLQFSLMGPKL+IS DQV
Sbjct:   316 YQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKLFISADQV 355

GO:0006955 "immune response" evidence=IMP

GO:0008219 "cell death" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2135912 AT4G24290 "AT4G24290" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
 Identities = 95/206 (46%), Positives = 139/206 (67%)

Query:    12 SIQALGRGFDVTSDIRLLYCKG-APGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSK 70
             +I ++G G+D+  D+RL YCKG +  SRL+ I E     ++V+  G+ +PNVS  I+C K
Sbjct:    14 AIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVSKSIKCDK 73

Query:    71 GNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGN 130
             G R   R  +  F +MA  FN++  ++G IP G FNAMF F+ CWQ DAA TK+LA  G 
Sbjct:    74 GERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSSCWQKDAAYTKNLAFDGV 133

Query:   131 FISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQ 190
             FISLY V L K  ++LRE +++AVP +WDP  LA FI+ YGTHI+ S+ +GG+DV+Y +Q
Sbjct:   134 FISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVKMGGKDVIYAKQ 193

Query:   191 HQSSPLSMMDIENYVKDIGDERFMDS 216
               SS L   D++  +K++ D+RF+++
Sbjct:   194 QHSSKLQPEDLQKRLKEVADKRFVEA 219

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2032532 NSL1 "AT1G28380" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
 Identities = 98/226 (43%), Positives = 145/226 (64%)

Query:    12 SIQALGRGFDVTSDIRLLYCKGAP-GSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSK 70
             ++  +G G+D+ SD+R   CK  P GSRLV ID   +  DL+   G++V NVS  I+C K
Sbjct:    18 AVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNR-DLIFPGGIVVNNVSSSIKCDK 76

Query:    71 GNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGN 130
             G R+  R  + SF++M+  FN+   +SG IP G FN MF F+ CW  DA++ K+LA  G 
Sbjct:    77 GERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAFSKCWPKDASSVKTLAYDGW 136

Query:   131 FISLYKVKLAKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQ 190
             FISLY V++ +  L LR+E++R VP SWD   LA FIE YGTH+V  +T+GG+DV++++Q
Sbjct:   137 FISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDVIHVKQ 196

Query:   191 HQSSPLSMMDIENYVKDIGDERF----MDSKSQSSAAPLKYKDKDV 232
              + S     +I+  +K  GDERF    ++SKS +S    K K++++
Sbjct:   197 MRKSNHEPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPKEENL 242

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0006955 "immune response" evidence=IMP

GO:0008219 "cell death" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0009651 "response to salt stress" evidence=TAS

GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP

GO:0052542 "defense response by callose deposition" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006820 "anion transport" evidence=RCA

GO:0006862 "nucleotide transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006984 "ER-nucleus signaling pathway" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015696 "ammonium transport" evidence=RCA

GO:0015802 "basic amino acid transport" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0043269 "regulation of ion transport" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2006807 AT1G14780 "AT1G14780" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
 Identities = 91/211 (43%), Positives = 136/211 (64%)

Query:    12 SIQALGRGFDVTSDIRLLYCKGAPGS----RLVHIDEDHHAGDLVVSDGVLVPNVSVDIE 67
             ++++LG+GFD+T+D RL YCK   GS    RLV +D+  +    +   GV   NVS DI 
Sbjct:    12 AVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVF-QNVSADIN 70

Query:    68 CSKGNRSIERIPVCSFHEMAGYFNEKSGISGNIPLGSFNAMFNF-TGCWQADAAATKSLA 126
             C KG R+  R  +  F++M+ YFN++S ++G IP G+FNA F F +G W  DAA  KSL 
Sbjct:    71 CDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANVKSLG 130

Query:   127 MVGNFISLYKVKLAKLN-LVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDV 185
             +  + ++L+ + +   N L L + +R AVP SWDP LLA FIE YGTH++T +++GG+DV
Sbjct:   131 LDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGGQDV 190

Query:   186 VYIRQHQSSPLSMMDIENYVKDIGDERFMDS 216
             V +RQ +SS L    + +++ D+GD+ F  S
Sbjct:   191 VVVRQDKSSDLDNDLLRHHLYDLGDQLFTGS 221

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0015824 "proline transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C7N2	CAD1_ARATH	No assigned EC number	0.7676	0.9549	0.6042	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	355
pfam01823	209	pfam01823, MACPF, MAC/Perforin domain	3e-32
smart00457	195	smart00457, MACPF, membrane-attack complex / perfo	1e-16
PTZ00482	844	PTZ00482, PTZ00482, membrane-attack complex/perfor	0.001

>gnl|CDD|216723 pfam01823, MACPF, MAC/Perforin domain

 Score =  119 bits (300), Expect = 3e-32
 Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 28/212 (13%)

Query: 103 GSFNAMFNFTGCWQADAAATKSLAMVGNFISLYKVKLAK-LNLVLREEIRRAV---PYSW 158
           GSF+A   F            S  +  ++ SLY+  L    +L L +E  +A+   P ++
Sbjct: 1   GSFSASSEFKSLSNKTKQKKSSFIISKSYCSLYQFSLKPPNDLELSDEFLKALNALPSTY 60

Query: 159 DPPLLA---SFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIE-----------NY 204
           D         F E YGTH +TS+T+GG+ V  ++   S  +  + +            ++
Sbjct: 61  DSATKDSYIQFFEKYGTHYITSVTLGGKIVYVLKLDSSQ-VKKLKLTGSDCVSAEAGASF 119

Query: 205 VKDIGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGDDL------EQSHAKWAETVQLA 258
            K         S SQ             +      GG          ++++KWAE+V+  
Sbjct: 120 GKVSSKGCKSTSSSQKEK--KSSSSSIESSKTDVIGGTPEFNAGSDPKTYSKWAESVKDN 177

Query: 259 PDVINMTFTPIVSLL-EGVPGIKHLARAIELY 289
           P  I     PI  LL E     ++L +A+E Y
Sbjct: 178 PMPIKYKLVPISELLKEVPCKKENLKKALEEY 209

The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerisation of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerises into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (pfam01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold. Length = 209

>gnl|CDD|214671 smart00457, MACPF, membrane-attack complex / perforin

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 38/193 (19%)

Query: 130 NFISLYKVKLAKLNLVLREEIR-RAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYI 188
               LY VKL +L L L      R +P +++    A FI++YGTH +TS T+GG   + +
Sbjct: 8   VRNRLYSVKLDELPLALEFLKALRDLPDTYNRGAYARFIDDYGTHYITSATLGGEYSLLL 67

Query: 189 RQHQS---------------------------SPLSMMDIENYVKDIGDERFMDSKSQSS 221
              +                            S    +   +Y+K +      +S +Q  
Sbjct: 68  VLDKESLERKGLTSEDISKCLAGSSNSFAGSVSAEHCLQSSSYIKYLSTSLRRESHTQVL 127

Query: 222 AAPLKYKDKDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKH 281
              +             RG        + WAE+V   P +I+++  PI  LL   P +  
Sbjct: 128 GGHVTVLCD------LLRGPSSNSLDFSDWAESVPNEPVLIDVSLAPIYELLPPNPELSQ 181

Query: 282 ----LARAIELYL 290
               L +A+  YL
Sbjct: 182 KREALRQALRSYL 194

Length = 195

>gnl|CDD|240433 PTZ00482, PTZ00482, membrane-attack complex/perforin (MACPF) Superfamily; Provisional

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 12/126 (9%)

Query: 161 PLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSM----MDIENYVK------DIGD 210
           P+  SF E YGTHI+  + +GG+    +    SS   M    + ++  VK        G 
Sbjct: 427 PIWISFFEQYGTHIIMELQLGGKITKQVTVKNSSVEQMKKDGVSVKAQVKAQFGFASAGG 486

Query: 211 ERFMDSKSQSSAAPLKYK-DKDVTVIFRRRGGD-DLEQSHAKWAETVQLAPDVINMTFTP 268
              + S + S++    Y   + + VI      D   E++ A+W++TV   P  IN+   P
Sbjct: 487 STNVSSDNSSASNEYSYNMSEQLLVIGGNPIKDVTKEENLAEWSKTVSTLPMPINIELLP 546

Query: 269 IVSLLE 274
           I +L  
Sbjct: 547 ISTLFP 552

Length = 844

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	355
smart00457	194	MACPF membrane-attack complex / perforin.	99.95
PTZ00482	844	membrane-attack complex/perforin (MACPF) Superfami	99.94
PF01823	212	MACPF: MAC/Perforin domain; InterPro: IPR020864 Th	99.94
PTZ00481	524	Membrane attack complex/ Perforin (MACPF) Superfam	99.91

>smart00457 MACPF membrane-attack complex / perforin

Probab=99.95  E-value=8.2e-27  Score=211.77  Aligned_cols=161  Identities=24%  Similarity=0.370  Sum_probs=117.0

Q ss_pred             EEEEEEEEEEecCCCCcchHHHh---hCCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEe-ec--ccCCCCHHHHH
Q 018486          130 NFISLYKVKLAKLNLVLREEIRR---AVPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIR-QH--QSSPLSMMDIE  202 (355)
Q Consensus       130 ~~i~l~~~~l~~~~l~L~~~F~~---~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~-~~--~ss~ls~~evk  202 (355)
                      ..+.+..|+|+..+++|+++|.+   +||..|++++|.+||++||||||+++++||+ ..+... ++  ...+++.++++
T Consensus         6 ~~v~~~~y~~~~~~~~l~~~f~~~l~~Lp~~~~~~~~~~fi~~yGTH~i~s~~~Gg~~~~~~~~~~~~~~~~~~~~~~i~   85 (194)
T smart00457        6 WTVRNRLYSVKLDDIPLALEFLKALRDLPDQYNRGAYARFIDKYGTHYITSATLGGEYSLLLVLDKKSLERKGLTSEDIS   85 (194)
T ss_pred             EEEEEEEEEecCCCCCcCHHHHHHHHhCccccCHHHHHHHHHHhCCeEEEeeeeeeeEEEEEEEcHHHHHhcCCCHHHHH
Confidence            34455555555556899999998   6999999999999999999999999999999 444333 33  34479999999


Q ss_pred             HHHHhhcccccc-ccccccccC---cccccCC--ceEEEEEeecCCcc------------hhhHHHHHHhhccCCceeee
Q 018486          203 NYVKDIGDERFM-DSKSQSSAA---PLKYKDK--DVTVIFRRRGGDDL------------EQSHAKWAETVQLAPDVINM  264 (355)
Q Consensus       203 ~cl~~~~~~~f~-~~~~~s~~~---~~~~~~~--~~~vi~~~~GG~~l------------~~~~~~W~~SV~~~P~vI~~  264 (355)
                      +|++. +...|. +.+......   .......  ..+.+..++||...            ...|.+|++||+.+|++|++
T Consensus        86 ~cl~~-~~~~~~~~~s~~~c~~~~~~~~~~~~~~~~~~~~~v~GG~~~~~~~l~~~~~~~~~~~~~W~~sv~~~p~~I~~  164 (194)
T smart00457       86 TCLGG-SSNSFAGSVSAEHCLQFSSYSKYLSTSLRRLSHTQVLGGHVTVLCDLLRGPSTNSLDFSDWAESVPNEPVLIDV  164 (194)
T ss_pred             hhhce-eeeEEEEeecCceecccccccccccccccceeeEEEeCCchHHHHHHhcCCCCChHHHHHHHHHhhhCCceeEE
Confidence            99986 233332 111110000   0011110  12334456788521            25799999999999999999


Q ss_pred             eeeehhhhccCch---hHHHHHHHHHHHHH
Q 018486          265 TFTPIVSLLEGVP---GIKHLARAIELYLE  291 (355)
Q Consensus       265 ~l~PI~eLl~~~p---~k~~Lk~AI~~Yl~  291 (355)
                      ++.||++||++.|   ++++|++||++||.
T Consensus       165 ~l~Pi~~lv~~~~~~~~~~~l~~Al~~Yl~  194 (194)
T smart00457      165 SLAPIYELLPPNPLSQKREALRQALRSYLK  194 (194)
T ss_pred             eeEEHHHHhcCcchHHHHHHHHHHHHHHhC
Confidence            9999999999985   99999999999984

>PTZ00482 membrane-attack complex/perforin (MACPF) Superfamily; Provisional

Probab=99.94  E-value=7.3e-26  Score=239.33  Aligned_cols=317  Identities=18%  Similarity=0.210  Sum_probs=189.2

Q ss_pred             HHhhccccceeeecCchhhcc--CCCCCC--CceEEecCCC------CccceeecCCeeeCCCCcceeecCcceeEEeec
Q 018486           10 RYSIQALGRGFDVTSDIRLLY--CKGAPG--SRLVHIDEDH------HAGDLVVSDGVLVPNVSVDIECSKGNRSIERIP   79 (355)
Q Consensus        10 ~~~~~~lG~GyD~t~d~r~~~--~k~~~~--srli~~~~~~------~~~~l~~p~g~~v~~v~~~i~~~k~~~~~~~sd   79 (355)
                      .+++++||.||||..---+..  -.-.||  .++|.+.=..      +.+....|.|+-|   .+.+.|.+++..+..++
T Consensus       243 ~~gleYLG~GYDIi~GNPlGd~~~~vDPGYR~pII~~~~~~n~~~~~nd~~~~~P~G~wI---R~e~sC~rSe~i~eI~s  319 (844)
T PTZ00482        243 FPGLYFLGIGYDSLFGNPLGEPDSLTDPGYRGQIILMNWAQSNDGVANDLATLQPLNGWI---RKENACSRSESIKECSS  319 (844)
T ss_pred             cccceecccceeceecCCCCCccccCCCcccchhhcccccccccccCccccccCCCCcee---ccccceeccccceeecc
Confidence            689999999999985322211  001122  2344432100      1122345666433   34578999998888777


Q ss_pred             cccHHHhhhhccceeeeeeccC-CceEEEEEeecchhhHhHHHHhhcceec-----EEEEEEEEEEecC-CCCcchHHHh
Q 018486           80 VCSFHEMAGYFNEKSGISGNIP-LGSFNAMFNFTGCWQADAAATKSLAMVG-----NFISLYKVKLAKL-NLVLREEIRR  152 (355)
Q Consensus        80 v~~f~~ms~~fn~~~~L~~~ip-~g~f~~~f~~s~s~~~~~a~~ks~~~d~-----~~i~l~~~~l~~~-~l~L~~~F~~  152 (355)
                      +.+++   ..+..++++++..+ .+.|+++.+|.     .++...+..-.+     ..-..|.+.|... +..|+++|++
T Consensus       320 isdy~---ksLS~dasvsgs~~g~~sFSAS~gYk-----~f~~~lskk~~k~fi~ks~C~~Y~~~L~~~~~~~Lt~~F~~  391 (844)
T PTZ00482        320 LSDYT---KNLSAEASVSGSYMGINSFSASTGYK-----KFLQEVSKRTTKTYLLKSNCVKYTAGLPPYFKWNQTTAFKN  391 (844)
T ss_pred             HHHhh---hheeeeeecccccccceeeecccchH-----HHHHHHhhcceeEEEEeeeEEEEEEeccccCCCccCHHHHH
Confidence            66655   34666777777533 23444444432     233332221122     2223566777662 3479999999


Q ss_pred             h---CCCCCC------------------------hHHHHHHHhccccEEEEEEEEccEEEEEEeecccCCCCH-HHHHHH
Q 018486          153 A---VPYSWD------------------------PPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSM-MDIENY  204 (355)
Q Consensus       153 ~---LP~~yd------------------------~~~y~~fIe~YGTHyit~v~lGGk~v~~v~~~~ss~ls~-~evk~c  204 (355)
                      +   ||..|+                        ...|++||++|||||+++++|||+-...+ .  .++.+. +..+.|
T Consensus       392 aL~~LP~~f~~~~~~~~Cs~~~Y~~n~~~e~C~~i~~W~~f~~~yGTH~~~~~~lGG~I~~~~-~--le~s~~e~lkk~~  468 (844)
T PTZ00482        392 AVNGLPPVFDGLEAESECSSDVYEQDKTAEECENVPIWISFFEQYGTHIIMELQLGGKITKQV-T--VKNSSVEQMKKDG  468 (844)
T ss_pred             HHHhcchhhhcccccccCCHHHhhhcccccccccHHHHHHHHHHcCceEEEEEEeccEEEEEE-E--ecchhHHHHHhcC
Confidence            5   899887                        34699999999999999999999933211 1  122222 335666


Q ss_pred             HHhhccccc--ccc--cccc--ccC---cccccCCceEEEEEeecCCcc-----hhhHHHHHHhhccCCceeeeeeeehh
Q 018486          205 VKDIGDERF--MDS--KSQS--SAA---PLKYKDKDVTVIFRRRGGDDL-----EQSHAKWAETVQLAPDVINMTFTPIV  270 (355)
Q Consensus       205 l~~~~~~~f--~~~--~~~s--~~~---~~~~~~~~~~vi~~~~GG~~l-----~~~~~~W~~SV~~~P~vI~~~l~PI~  270 (355)
                      +++.+.+..  .++  .++.  .+.   ...++....+--..++||.++     ...|.+|++||+.+|+||+++|.|||
T Consensus       469 lsVkA~~k~~~g~~S~ggs~~~ss~~eskss~~~~~~sk~t~ViGG~~~~d~~d~~~~~~W~~SV~~nP~pI~~~l~PI~  548 (844)
T PTZ00482        469 VSVKAQVKAQFGFASAGGSTNVSSDNSSASNEYSYNMSEQLLVIGGNPIKDVTKEENLAEWSKTVSTLPMPINIELLPIS  548 (844)
T ss_pred             cceeeeehhccccceecccccccchhhhhhhhhhhccceEEEEECCCCCCCCCChHHHHHHHHHhhcCCcceEEEeEEHH
Confidence            666554332  111  1111  111   011111111111234799764     46799999999999999999999999


Q ss_pred             hhccCchhHHHHHHHHHHHHH-hCCChhHHhh----hhcccCCcccccCCCCC-ccCCCCCCceeEEeecceeEecC
Q 018486          271 SLLEGVPGIKHLARAIELYLE-YKPPIEDLQY----FLDYQIPRVWAPQHSNI-QRKEPVCSSLQFSLMGPKLYISP  341 (355)
Q Consensus       271 eLl~~~p~k~~Lk~AI~~Yl~-~kp~ieel~~----fle~~~p~~wap~~n~~-~~~~~~~~~l~f~~~g~~l~~~~  341 (355)
                      +||++.++|++|++||+.|++ +.-.+++..+    -+...+ .....+.+++ ..-...||.=+--+||.-|-++.
T Consensus       549 ~Ll~~~~~ke~y~kAI~~Yi~l~G~~p~~~~~~~~~~I~~~l-~~~t~i~~~g~~~i~a~CP~g~vIlfGFiL~~~~  624 (844)
T PTZ00482        549 TLFPSDDLKESYEKAVIYYSRLYGLSPHDTMQKDEKDIVKIL-TAATTVTWSGAPPISAECPHGQVVLFGFAMRQNF  624 (844)
T ss_pred             HhcCChhhHHHHHHHHHHHHHHhCCChhHhhccccccHHHHH-hhCcEEeecCCCceeEECCCCCEEEEEEEEEeec
Confidence            999997789999999999999 4444444221    111122 1122233333 34456799999999999886653

>PF01823 MACPF: MAC/Perforin domain; InterPro: IPR020864 The membrane attack complex/perforin (MACPF) domain is conserved in bacteria, fungi, mammals and plants

Probab=99.94  E-value=9.8e-27  Score=211.70  Aligned_cols=162  Identities=27%  Similarity=0.428  Sum_probs=119.5

Q ss_pred             ecEEEEEEEEEEec-CCCCcchHHHh---hCCCCCChHH---HHHHHhccccEEEEEEEEccE-EEEEEe-ec--ccCCC
Q 018486          128 VGNFISLYKVKLAK-LNLVLREEIRR---AVPYSWDPPL---LASFIENYGTHIVTSITIGGR-DVVYIR-QH--QSSPL  196 (355)
Q Consensus       128 d~~~i~l~~~~l~~-~~l~L~~~F~~---~LP~~yd~~~---y~~fIe~YGTHyit~v~lGGk-~v~~v~-~~--~ss~l  196 (355)
                      ....+.+|++.|.. .++.|+++|++   +||..|++..   |.+||++|||||+++++|||+ ..++.. ++  .....
T Consensus        26 ~~~~~~~~~~~~~~~~~~~L~~~F~~~l~~L~~~~~~~~~~~y~~f~~~yGTH~v~~~~lGG~~~~~~~~~~~~~~~~~~  105 (212)
T PF01823_consen   26 SKSNCSRYQFSLNDSDDLPLTPEFLSDLNALPAEYNSDNTDEYYRFFDKYGTHYVTSVTLGGKLIYIYSVSKSSLESSKE  105 (212)
T ss_dssp             EEEEEEEEEEEE-HSSSBHBGHHHHHHHHTSHSS--HHHHHHHHHHHHHH-SEEEEEEEEEEEEEEEEEEEHHHHHHTTS
T ss_pred             EEEEEEEEEEEEecCCCCCcCHHHHHHHHhhCcccCccchHHHHHHHHHhCcEEEEEEEEcceeEEEEEeeehhhccccc
Confidence            55667799999954 57889999976   6999999988   999999999999999999999 554433 33  33455


Q ss_pred             CHHHHHHHHHhhcccccccccc----cccc---CcccccCCceEEEEEeecCCcc------hhhHHHHHHhhccCCceee
Q 018486          197 SMMDIENYVKDIGDERFMDSKS----QSSA---APLKYKDKDVTVIFRRRGGDDL------EQSHAKWAETVQLAPDVIN  263 (355)
Q Consensus       197 s~~evk~cl~~~~~~~f~~~~~----~s~~---~~~~~~~~~~~vi~~~~GG~~l------~~~~~~W~~SV~~~P~vI~  263 (355)
                      ...+++.|++..+.+.+.+...    +...   ....+......+...++||++.      ...+.+|++||.++|.||+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~~~W~~sv~~~p~~i~  185 (212)
T PF01823_consen  106 SSIEMKICVSASASASFAGVSVSGSASNSSSQSQSSSFSQSNSSSSIIVIGGDPSSAAASDNDNFSEWASSVKDNPVPID  185 (212)
T ss_dssp             SHHHHHHHHHHHHHHHTHCHCCCHHTCTTTHHHHCCHHHCHEEEEEEEEESS-CTTHHCCCHHHHHHHHHHHCTS-EEEE
T ss_pred             cchhhhheeeeeeeeeecccccccccccCccccccccccccceeEEEEEECCccccccccCcccHHHHHHHHhCCCeeEE
Confidence            6778789999888766622211    1110   1112222334555667899863      6689999999999999999


Q ss_pred             eeeeehhhhccCch-hHHHHHHHHHHH
Q 018486          264 MTFTPIVSLLEGVP-GIKHLARAIELY  289 (355)
Q Consensus       264 ~~l~PI~eLl~~~p-~k~~Lk~AI~~Y  289 (355)
                      ++|.||++||++.+ +|++|++||++|
T Consensus       186 ~~l~PI~~li~~~~~k~~~l~~ai~~Y  212 (212)
T PF01823_consen  186 FELQPIYDLIPDNPFKKENLKKAIEEY  212 (212)
T ss_dssp             EEEEEGGGGGCTTTTHHHHHHHHHHHH
T ss_pred             EEeEEHHHHcCCcHHHHHHHHHHHHhC
Confidence            99999999999988 999999999998

It was originally identified and named as being common to five complement components (C6, C7, C8-alpha, C8-beta, and C9) and perforin. These molecules perform critical functions in innate and adaptive immunity. The MAC family proteins and perforin are known to participate in lytic pore formation. In response to pathogen infection, a sequential and highly specific interaction between the constituent elements occurs to form transmembrane channels which are known as the membrane-attack complex (MAC).Only a few other MACPF proteins have been characterised and several are thought to form pores for invasion or protection [, , ]. Examples are proteins from malarial parasites [], the cytolytic toxins from sea anemones [], and proteins that provide plant immunity [, ]. Functionally uncharacterised MACPF proteins are also evident in pathogenic bacteria such as Chlamydia spp [] and Photorhabdus luminescens (Xenorhabdus luminescens) []. The MACPF domain is commonly found to be associated with other N- and C-terminal domains, such as TSP1 (see PDOC50092 from PROSITEDOC), LDLRA (see PDOC00929 from PROSITEDOC), EGF-like (see PDOC00021 from PROSITEDOC),Sushi/CCP/SCR (see PDOC50923 from PROSITEDOC), FIMAC or C2 (see PDOC00380 from PROSITEDOC). They probably control or target MACPF function [, ]. The MACPF domain oligomerizes, undergoes conformational change, and is required for lytic activity. The MACPF domain consists of a central kinked four-stranded antiparallel beta sheet surrounded by alpha helices and beta strands, forming two structural segments. Overall, the MACPF domain has a thin L-shaped appearance. MACPF domains exhibit limited sequence similarity but contain a signature [YW]-G-[TS]-H-[FY]-x(6)-G-G motif [, , ]. Some proteins known to contain a MACPF domain are listed below: Vertebrate complement proteins C6 to C9. Complement factors C6 to C9 assemble to form a scaffold, the membrane attack complex (MAC), that permits C9 polymerisation into pores that lyse Gram-negative pathogens [, ]. Vertebrate perforin. It is delivered by natural killer cells and cytotoxic T lymphocytes and forms oligomeric pores (12 to 18 monomers) in the plasma membrane of either virus-infected or transformed cells. Arabidopsis thaliana (Mouse-ear cress) constitutively activated cell death 1 (CAD1) protein. It is likely to act as a mediator that recognises plant signals for pathogen infection []. Arabidopsis thaliana (Mouse-ear cress) necrotic spotted lesions 1 (NSL1) protein []. Venomous sea anemone Phyllodiscus semoni (Night anemone) toxins PsTX-60A and PsTX-60B []. Venomous sea anemone Actineria villosa (Okinawan sea anemone) toxin AvTX-60A []. Plasmodium sporozoite microneme protein essential for cell traversal 2 (SPECT2). It is essential for the membrane-wounding activity of the sporozoite and is involved in its traversal of the sinusoidal cell layer prior to hepatocyte-infection []. P. luminescens Plu-MACPF. Although nonlytic, it was shown to bind to cell membranes []. Chlamydial putative uncharacterised protein CT153 []. ; PDB: 2QP2_A 3OJY_B 3NSJ_A 4E0S_B 3T5O_A 4A5W_B 2QQH_A 2RD7_A.

>PTZ00481 Membrane attack complex/ Perforin (MACPF) Superfamily; Provisional

Probab=99.91  E-value=1.5e-23  Score=204.41  Aligned_cols=170  Identities=22%  Similarity=0.366  Sum_probs=137.6

Q ss_pred             EEEEEEecCCCCcchHHHh---hCCCCCChHHHHHHHhccccEEEEEEEEccE--EEEEEeecc------cCCCCHHHHH
Q 018486          134 LYKVKLAKLNLVLREEIRR---AVPYSWDPPLLASFIENYGTHIVTSITIGGR--DVVYIRQHQ------SSPLSMMDIE  202 (355)
Q Consensus       134 l~~~~l~~~~l~L~~~F~~---~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk--~v~~v~~~~------ss~ls~~evk  202 (355)
                      +.+.+|+.+.|+|+++|++   +||.+|+++.|.+||++|||||+++++|||.  .++.+|+|.      ..|++.++|+
T Consensus       190 v~r~~mRsdnLmLh~eFqraL~~LP~eYd~g~Y~~FIe~YGTHYITsv~LGG~VE~vTs~RtC~~slps~~~GlS~~qVk  269 (524)
T PTZ00481        190 VIRMTFKTDNLKLNRFAQRAIDALPEDYQPDVYNEFLNAWGTHISVDTFIGGMIEKQTVFKDCVFFTPQFNGGLSPEQVE  269 (524)
T ss_pred             eEEEEEecCCceeCHHHHHHHHhcchhcCHHHHHHHHHhcCceEEEEeeEcCEEEEEeehhhhhhhchhhhcCCCHHHHH
Confidence            5788899999999999998   5999999999999999999999999999999  779999995      2489999999


Q ss_pred             HHHHhhccccccccccccccCccccc-C-CceEEEEEeecCCcchhhHHHHHHhhccCCceeeeeeeehhhhccCchh-H
Q 018486          203 NYVKDIGDERFMDSKSQSSAAPLKYK-D-KDVTVIFRRRGGDDLEQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPG-I  279 (355)
Q Consensus       203 ~cl~~~~~~~f~~~~~~s~~~~~~~~-~-~~~~vi~~~~GG~~l~~~~~~W~~SV~~~P~vI~~~l~PI~eLl~~~p~-k  279 (355)
                      .||..++.-..          +..|- - +.+.+- .+-||++.  ...+|.+|+..||++|++.-.|||+-++..|. |
T Consensus       270 ~cLn~ELqgn~----------~~Gy~~~rrkvslD-~i~GGNPE--~i~nr~~Tfs~NPvplK~n~ipiW~afpagpqvk  336 (524)
T PTZ00481        270 QALRNELNGNP----------AEGFFTARRQVTLD-HKFGGNPE--DVANWEQTISQNPALLKINRFLSWDNLTANPQVK  336 (524)
T ss_pred             HHHHHHhcCCC----------Cccceeeeeeeehh-hhcCCChh--HhhhhhhhhccCceeeeeeeeeehhhcccCcHHH
Confidence            99999876221          22331 1 122111 23599873  58999999999999999999999999999776 9


Q ss_pred             HHHHHHHHH--------HHHhCCChhHHhhhhcccCCc-ccccCCCCC
Q 018486          280 KHLARAIEL--------YLEYKPPIEDLQYFLDYQIPR-VWAPQHSNI  318 (355)
Q Consensus       280 ~~Lk~AI~~--------Yl~~kp~ieel~~fle~~~p~-~wap~~n~~  318 (355)
                      +||++||..        |..|...+.|-++ +|..-|+ .|| .++||
T Consensus       337 ~NlqqaI~nriesM~qr~~~~q~qv~eqRr-ie~~~P~ta~A-iqgng  382 (524)
T PTZ00481        337 ANLQQAIMNRIESMKQRQISYQQQVREQRR-IERNGPRTAWA-IQGNG  382 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCcceEE-EccCc
Confidence            999999986        4445556666655 6777787 788 77777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	355
2qp2_A	511	Unknown protein; toxin, unknown function; 2.00A {P	2e-32
2rd7_A	367	Complement component C8 alpha chain; membrane atta	3e-28
3nsj_A	540	Perforin-1; pore forming protein, immune system; H	9e-14
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	3e-10
3ojy_B	537	Complement component C8 beta chain; macpf, lipocal	4e-09
3ojy_A	554	Complement component C8 alpha chain; macpf, lipoca	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
3kk7_A	541	Putative cell invasion protein with MAC/perforin;	2e-04

>2qp2_A Unknown protein; toxin, unknown function; 2.00A {Photorhabdus luminescens subsp} Length = 511

 Score =  125 bits (315), Expect = 2e-32
 Identities = 44/335 (13%), Positives = 92/335 (27%), Gaps = 41/335 (12%)

Query: 12  SIQALGRGFDVTSDIRLLYCKGAP--GSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECS 69
             + +G  +DV      +          R ++  ED+     ++   + VP         
Sbjct: 41  GAEMIGTSYDVFGKYCNVGSCMNSLFDERKINASEDNFKKVTILGKTLKVPYYIDCYSVG 100

Query: 70  KGNRSIERIPVCSFHEMAGYFNEKSGISGNIPL--GSFNAMFNFTGCWQADAAATKSLAM 127
                       S        + KS I GN      S    F+       +     + + 
Sbjct: 101 D--LKYTNASGESIESYQSNISSKSRIKGNYLFFSASLKVDFDTDSLTDFE----NAFSR 154

Query: 128 VGNFISLYKVKL--AKLNLVLREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDV 185
           +     LY +K     L   L+E ++ A+  +     +      +G+H ++ + +GG   
Sbjct: 155 IQYTYDLYILKSSAEALKEFLKESVKTALDKADTEEDMNDLFNTWGSHFLSGVVMGGCAQ 214

Query: 186 VYIRQHQSSPLSMMDIENYVKDIGDERFMDS--KSQSSAAPLKYKDKDVTVIFRRRGGDD 243
                ++ +       +             S     S    +K       +     GGD 
Sbjct: 215 YSSSTNKYTSNLTNSFDVVAAASFAGFIGLSARTGNSFMEDIKKFRSASNIKTHAIGGDL 274

Query: 244 L----------------------EQSHAKWAETVQLAPDVIN----MTFTPIVSLLEGVP 277
                                  +++   W  +V  AP+++N       T I  L     
Sbjct: 275 SRFDPFGGATSADQPSAEEIAAAKKAFEDWKASVPNAPELVNFADSNPLTGIWELCSDRT 334

Query: 278 GIKHLARAIE-LYLEYKPPIEDLQYFLDYQIPRVW 311
               L +  E ++   +     +      +I    
Sbjct: 335 QKAKLKKHFETVWAPAESAKRRVHADYIDEIIIGI 369

>2rd7_A Complement component C8 alpha chain; membrane attack system, cleavage on PAIR of basic residues, complement alternate pathway, complement pathway; 2.15A {Homo sapiens} PDB: 2qqh_A Length = 367

 Score =  112 bits (280), Expect = 3e-28
 Identities = 50/343 (14%), Positives = 102/343 (29%), Gaps = 65/343 (18%)

Query: 13  IQALGRGFDVTS----------DIRLLYCKGAPGSRLVHIDEDHHAGDLVVSDGVL---- 58
            Q    G+++ +                C+         +  D     L   D       
Sbjct: 24  SQKAALGYNILTQEDAQSVYDASYYGGQCETVYNGEWRELRYDSTCERLYYGDDEKYFRK 83

Query: 59  ---VPNVSVDIECSKGNRSIERIPVCSF-HEMAGYFNEKSGISGNIPLGSFNAMFNFTGC 114
                    +     G  S           ++    ++  G++  I       +      
Sbjct: 84  PYNFLKYHFEALADTGISSEFYDNANDLLSKVKKDKSDSFGVTIGIGPAGSPLLVGVGVS 143

Query: 115 WQADA----------AATKSLAMVGNFISLYKVKLAKLNLVLREEIRRAV---PYSWDPP 161
              D                   +   +     K+ K +++L E + +++   P  ++  
Sbjct: 144 HSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKMRKDDIMLDEGMLQSLMELPDQYNYG 203

Query: 162 LLASFIENYGTHIVTSITIGGR----DVVYIRQHQSSPLSMMDIENYVKDIGDERFMDSK 217
           + A FI +YGTH +TS ++GG      V+   + +S  ++  DI          ++ D  
Sbjct: 204 MYAKFINDYGTHYITSGSMGGIYEYILVIDKAKMESLGITSRDITTCFGGSLGIQYEDKI 263

Query: 218 SQSSAAPLKYKDKDVT--------------VIFRRRGGDDL----------EQSHAKWAE 253
           +        +  K                 +I R RGG               ++  W  
Sbjct: 264 NVGGGLSGDHCKKFGGGKTERARKAMAVEDIISRVRGGSSGWSGGLAQNRSTITYRSWGR 323

Query: 254 TVQLAPDVINMTFTPIVSLLEGVPGI------KHLARAIELYL 290
           +++  P VI+    PI  +L            ++L RA++ YL
Sbjct: 324 SLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQNLRRALDQYL 366

>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540

 Score = 71.5 bits (174), Expect = 9e-14
 Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 60/336 (17%)

Query: 13  IQALGRGFDVTS-----DIRLLYCKGAPGSRLVHIDEDHHAGDLV--VSDGVLVPNVSVD 65
           +   G G DVT+        +   +     R   + ++    D    +   +        
Sbjct: 20  VWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLMRDATQRLPVAIT----HWR 75

Query: 66  IECSKGNRSIERIPVCSFHEMAGYFNEKSGISGNI-----PLGSFNAMFNFTGCWQADA- 119
              S   R++    V S   +A            +     P    N   +  G     A 
Sbjct: 76  PHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEANMRASVAGSHSKVAN 135

Query: 120 -AATKSLAMVGNFIS------LYKVKLAKLNLVLREEIRRAV---PYSWDP---PLLASF 166
            AA K+     NF S      +Y  +L +    L  + ++A+   P +++          
Sbjct: 136 FAAEKTYQDQYNFNSDTVECRMYSFRLVQ-KPPLHLDFKKALRALPRNFNSSTEHAYHEL 194

Query: 167 IENYGTHIVTSITIGGR----DVVYIRQHQSSPLSMMDIEN------------YVKDIGD 210
           I +YGTH +T++ +GGR      +   Q   + L+  ++ +                  +
Sbjct: 195 ISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASVSSE 254

Query: 211 ERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD------------DLEQSHAKWAETVQLA 258
            +  + K +       +            GG                +  + W  ++   
Sbjct: 255 YKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSN 314

Query: 259 PDVINMTFTPIVSLL-EGVPGIKHLARAIELYLEYK 293
           P +++ +  P+ +LL E  P  + L +AI  Y+  +
Sbjct: 315 PGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSR 350

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913

 Score = 60.7 bits (146), Expect = 3e-10
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 37/210 (17%)

Query: 123 KSLAMVGNFISLYKVKLAKLNLVLREEIRRAV---PYSWDPPLLASFIENYGTHIVTSIT 179
            S   +   + +        +L L +   +A+   P  ++  L +   +++GTH  TS +
Sbjct: 290 SSFIRIHKVMKVLNFTTKAKDLHLSDVFLKALNHLPLEYNSALYSRIFDDFGTHYFTSGS 349

Query: 180 IGGR--DVVYIRQHQ--SSPLSMMDIENYVKDIGDERFMDSKSQSSAA---PLKYKDKDV 232
           +GG    +      +  +S L+  + ++ V+    +R + +K           K  +K  
Sbjct: 350 LGGVYDLLYQFSSEELKNSGLTEEEAKHCVRIETKKRVLFAKKTKVEHRCTTNKLSEKHE 409

Query: 233 T--------VIFRRRGGD-----DL----------EQSHAKWAETVQLAPDVINMTFTPI 269
                     I   RGG       L          E++ ++W E+V+  P VI+    PI
Sbjct: 410 GSFIQGAEKSISLIRGGRSEYGAALAWEKGSSGLEEKTFSEWLESVKENPAVIDFELAPI 469

Query: 270 VSLLEGVPGI----KHLARAIELYLEYKPP 295
           V L+  +P       +L +A++ Y     P
Sbjct: 470 VDLVRNIPCAVTKRNNLRKALQEYAAKFDP 499

>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Length = 537

 Score = 56.8 bits (136), Expect = 4e-09
 Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 40/209 (19%)

Query: 122 TKSLAMVGNFISLYKVKLAKLNLVLREEIRRAV---PYSWDPPLLASFIENYGTHIVTSI 178
                   + + +   KL   +L+L  E  + V   P  +          ++GTH +T  
Sbjct: 235 KSVFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDLFRDFGTHYITEA 294

Query: 179 TIGGR-DVVYI---RQHQSSPLSMMDIEN-----------YVKDIGDERFMDSKSQSSAA 223
            +GG  +   +      +    ++ ++               +          K +    
Sbjct: 295 VLGGIYEYTLVMNKEAMERGDYTLNNVHACAKNDFKIGGAIEEVYVSLGVSVGKCRGILN 354

Query: 224 PLKYKDKDVTVIFRR----RGG------------DDLEQSHAKWAETVQLAPDVINMTFT 267
            +K ++K  T++       RGG                    +W + VQ  P +I +   
Sbjct: 355 EIKDRNKRDTMVEDLVVLVRGGASEHITTLAYQELPTADLMQEWGDAVQYNPAIIKVKVE 414

Query: 268 PIVSLLEGV------PGIKHLARAIELYL 290
           P+  L+            +++ +A+E + 
Sbjct: 415 PLYELVTATDFAYSSTVRQNMKQALEEFQ 443

>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Length = 554

 Score = 54.6 bits (130), Expect = 2e-08
 Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 39/218 (17%)

Query: 91  NEKSGISGNIPLGSFNAMFNFTGCWQADAAATKSLAMVGNF--------ISLYKVKLAKL 142
           +    I               +           +      F        +     K+ K 
Sbjct: 217 SFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKMRKD 276

Query: 143 NLVLREEIRRAV---PYSWDPPLLASFIENYGTHIVTSITIGGR--DVVYIRQHQ--SSP 195
           +++L E + +++   P  ++  + A FI +YGTH +TS ++GG    ++ I + +  S  
Sbjct: 277 DIMLDEGMLQSLMELPDQYNYGMYAKFINDYGTHYITSGSMGGIYEYILVIDKAKMESLG 336

Query: 196 LSMMDIENYVKDIGDERFMDSKSQSSAAPLKYKDKDV--------------TVIFRRRGG 241
           ++  DI          ++ D  +        +  K                 +I R RGG
Sbjct: 337 ITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAVEDIISRVRGG 396

Query: 242 D-----DLEQSHAK-----WAETVQLAPDVINMTFTPI 269
                  L Q+ +      W  +++  P VI+    PI
Sbjct: 397 SSGWSGGLAQNRSTITYRSWGRSLKYNPVVIDFEMQPI 434

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 48/433 (11%), Positives = 110/433 (25%), Gaps = 161/433 (37%)

Query: 41  HID-----EDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIP--VCSFHEMAGYFNEK 93
           H+D       +   D++    V       + +C    + ++ +P  + S  E+      K
Sbjct: 6   HMDFETGEHQYQYKDILS---VFEDAFVDNFDC----KDVQDMPKSILSKEEIDHIIMSK 58

Query: 94  SGISGNIPLGSF--------NAMFNFTGC-------WQADAAATKSLAMVGN---FIS-- 133
             +SG + L  F          +  F          +      T+          +I   
Sbjct: 59  DAVSGTLRL--FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116

Query: 134 --LYKV--KLAKLNLVLREE----IRRAV------PY-----------SWDPPLLASFIE 168
             LY      AK N V R +    +R+A+                   +W   +      
Sbjct: 117 DRLYNDNQVFAKYN-VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW---VALDVCL 172

Query: 169 NYGTHIVTS-----ITIGGRD--------------------VVYIRQHQSSPLSMMDIEN 203
           +Y            + +   +                            +  L +  I+ 
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 204 YVK----------------DIGDERFMD-----------SKSQSSAAPLK-YKDKDVTVI 235
            ++                ++ + +  +           ++ +     L       +++ 
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 236 FRRRG--GDDLEQSHAKWA---------ETVQLAPDVINMTFTPIVSLLEGVP------- 277
                   D+++    K+          E +   P  +++    I   +           
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI----IAESIRDGLATWDNWK 348

Query: 278 --GIKHLARAIELYLEYKPPIEDLQYFL-------DYQIP-----RVWAPQHSNIQRKEP 323
                 L   IE  L    P E  + F           IP      +W     ++ + + 
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW----FDVIKSDV 404

Query: 324 ---VCSSLQFSLM 333
              V    ++SL+
Sbjct: 405 MVVVNKLHKYSLV 417

>3kk7_A Putative cell invasion protein with MAC/perforin; STR genomics, joint center for structural genomics, JCSG; 2.46A {Bacteroides thetaiotaomicron vpi-5482} Length = 541

 Score = 41.9 bits (97), Expect = 2e-04
 Identities = 21/204 (10%), Positives = 53/204 (25%), Gaps = 47/204 (23%)

Query: 146 LREEIRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYV 205
           L E    A+ Y+         +++YG  ++T    GGR         ++ +     E  +
Sbjct: 188 LDELFVDAL-YNSSM---VELMQSYGEFVLTGYYTGGRASALFYGVDTNSIQFDSKEKDM 243

Query: 206 KD---------------------IGDERFMDSKSQSSAAPLKYKDKDVTVIFRRRGGD-- 242
                                             + ++  +  K   ++   +  GG   
Sbjct: 244 DVAINASYEWKNKKPTAPSDTIHSASGNLSIGTKRENSETITNKFSALSYSIKTLGGAYG 303

Query: 243 -----------DLEQSHAKWAETVQLAP-----DVINMTFTPIVSLLEGVPGIKHLARAI 286
                      +       W +++         D+ +    PI   +      +      
Sbjct: 304 YSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGLYPISDFILEENFKQRYNDTH 363

Query: 287 ELYLE----YKPPIEDLQYFLDYQ 306
             +       +P IE ++ ++   
Sbjct: 364 MDFQYQESLEEPYIEIIKMYIRKS 387

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	355
3nsj_A	540	Perforin-1; pore forming protein, immune system; H	100.0
3ojy_A	554	Complement component C8 alpha chain; macpf, lipoca	100.0
3ojy_B	537	Complement component C8 beta chain; macpf, lipocal	100.0
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	100.0
2rd7_A	367	Complement component C8 alpha chain; membrane atta	100.0
2qp2_A	511	Unknown protein; toxin, unknown function; 2.00A {P	100.0
3kk7_A	541	Putative cell invasion protein with MAC/perforin;	99.64

>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}

Probab=100.00  E-value=6.6e-44  Score=366.67  Aligned_cols=301  Identities=17%  Similarity=0.229  Sum_probs=224.7

Q ss_pred             HHhhccccceeeecC-chhh------ccCCCCCCCceEEec-CCCCccceeecCCeeeCCCCcc-eeecCcceeEEeecc
Q 018486           10 RYSIQALGRGFDVTS-DIRL------LYCKGAPGSRLVHID-EDHHAGDLVVSDGVLVPNVSVD-IECSKGNRSIERIPV   80 (355)
Q Consensus        10 ~~~~~~lG~GyD~t~-d~r~------~~~k~~~~srli~~~-~~~~~~~l~~p~g~~v~~v~~~-i~~~k~~~~~~~sdv   80 (355)
                      .++++.+|.||||+. +.|-      .|..+ +++.+-... ......-.-+|.++.  +...+ ++|+..++.++|++.
T Consensus        17 ~Pg~~l~G~G~nilt~e~~g~~VlD~~~~~~-~~G~C~~c~~~~~~~~~~RlP~nv~--~~~~~~~~~~~~~s~e~y~s~   93 (540)
T 3nsj_A           17 VPGVWMAGEGMDVTTLRRSGSFPVNTQRFLR-PDRTCTLCKNSLMRDATQRLPVAIT--HWRPHSSHCQRNVAAAKVHST   93 (540)
T ss_dssp             CTTGGGTTCEEETTTTEECSCCSBCCCCCSC-TTSCEEEEEETTTTTEEEEECTTEE--EEEECCSCCCCCCEEEEECSH
T ss_pred             CCChHHhcCCEEEecCcccCCEeEechhccC-CCCeeeEecccccCCceeeccceee--eEEEEEeeeeeeechhhcccH
Confidence            468999999999765 4432      34432 123432221 111012257888753  23445 899999999999998


Q ss_pred             ccH-HHhhhh--ccceeeeeec-cCCceEEEEEeecchhhHhHHHHhhcceec-------EEEEEEEEEEecCCCCcchH
Q 018486           81 CSF-HEMAGY--FNEKSGISGN-IPLGSFNAMFNFTGCWQADAAATKSLAMVG-------NFISLYKVKLAKLNLVLREE  149 (355)
Q Consensus        81 ~~f-~~ms~~--fn~~~~L~~~-ip~g~f~~~f~~s~s~~~~~a~~ks~~~d~-------~~i~l~~~~l~~~~l~L~~~  149 (355)
                      .++ ++++..  .||+++|+++ .|...+++++++++|...+++.+|+. .++       ..+++|+|+|+. +++|+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~s~s~~~~~a~~~s~-~~~~~F~~~~~~~~~~~~~~~~-~~~L~~~  171 (540)
T 3nsj_A           94 EGVAREAAANINNDWRVGLDVNPRPEANMRASVAGSHSKVANFAAEKTY-QDQYNFNSDTVECRMYSFRLVQ-KPPLHLD  171 (540)
T ss_dssp             HHHHHHHHTTBCSCTTTTSCCC-CCSTTTTCBCTTTTSHHHHHHHHHHH-HSCEEEEEEEEEEEEEEEEECS-SCCBCHH
T ss_pred             HHHHHHHhhhcccccceeeecccccccceeEEeecccchhhHHHHHhhh-ccceEEEEEEEEEEEEEEEeCC-CCCCCHH
Confidence            885 444443  4788888765 34445667888899988889887765 333       344589999985 6899999


Q ss_pred             HHh---hCCCCCCh---HHHHHHHhccccEEEEEEEEccE-EE-EEEeec--ccCCCCHHHHHHHHHhhcccccc-cccc
Q 018486          150 IRR---AVPYSWDP---PLLASFIENYGTHIVTSITIGGR-DV-VYIRQH--QSSPLSMMDIENYVKDIGDERFM-DSKS  218 (355)
Q Consensus       150 F~~---~LP~~yd~---~~y~~fIe~YGTHyit~v~lGGk-~v-~~v~~~--~ss~ls~~evk~cl~~~~~~~f~-~~~~  218 (355)
                      |++   +||..|++   ++|++||++||||||++++|||+ ++ ++++++  +++++|.+|+++||+.++++++. ..+.
T Consensus       172 F~~~l~~LP~~~~~~~~~~Y~~fi~~yGTHyi~s~~lGG~~~~i~~~~~~~~~~~~~t~~ev~~Cl~~e~~~~~~~~~~~  251 (540)
T 3nsj_A          172 FKKALRALPRNFNSSTEHAYHELISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASV  251 (540)
T ss_dssp             HHHHHHTSCSSCCSSTHHHHHHHHHHHCSEEEEEEEEEEEEEEEEEEEHHHHHHTTCCHHHHHHHHHHHHHHHHTSSCSC
T ss_pred             HHHHHHhcccccCcccHHHHHHHHHhcCcEEEEeeeccceEEEEEEEehHhHhhcCCCHHHHHHHHhhcccEEEEEeEee
Confidence            999   49999999   99999999999999999999999 55 566664  56799999999999988877663 2222


Q ss_pred             ccccCcc-----------cccCCceEEEEEeecCCcc------------hhhHHHHHHhhccCCceeeeeeeehhhhccC
Q 018486          219 QSSAAPL-----------KYKDKDVTVIFRRRGGDDL------------EQSHAKWAETVQLAPDVINMTFTPIVSLLEG  275 (355)
Q Consensus       219 ~s~~~~~-----------~~~~~~~~vi~~~~GG~~l------------~~~~~~W~~SV~~~P~vI~~~l~PI~eLl~~  275 (355)
                      +.....|           .|.....+++..++||.+.            .+.|.+|++||+++|+||+++|.|||+||+.
T Consensus       252 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~V~GG~~~~~~~L~~~~~~~p~~~~~W~~Sv~~~P~~I~~~l~PI~~Lv~~  331 (540)
T 3nsj_A          252 SSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEE  331 (540)
T ss_dssp             SHHHHHHHHHHHHTTCSSCHHHHCCCEEEEEESSCGGGCCCSSSCSSCCHHHHHHHHHHTTTSCEEEEEEEEEGGGGSCT
T ss_pred             cccccccccccccccccCCcccccceEEEEEeCCCccchhhhhcccCCCHHHHHHHHHHHhhCCceEEEEEEEHHHhcCC
Confidence            2211222           1111123566788999752            3579999999999999999999999999994


Q ss_pred             -chhHHHHHHHHHHHHHhCCChhHHhhhhcccCCc-ccc-cCCCCC-----ccCCCCCCce
Q 018486          276 -VPGIKHLARAIELYLEYKPPIEDLQYFLDYQIPR-VWA-PQHSNI-----QRKEPVCSSL  328 (355)
Q Consensus       276 -~p~k~~Lk~AI~~Yl~~kp~ieel~~fle~~~p~-~wa-p~~n~~-----~~~~~~~~~l  328 (355)
                       .++|+||++||++||.             ++.|| +|+ ||+||+     ..|.|+||.=
T Consensus       332 ~~~kr~nLk~Ai~~Yl~-------------e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~  379 (540)
T 3nsj_A          332 QNPKREALRQAISHYIM-------------SRARWQNCSRPCRSGQHKSSHDSCQCECQDS  379 (540)
T ss_dssp             TCTHHHHHHHHHHHHHH-------------HTCBCCCTTSCCBTTEEECSSCTTCEEESCT
T ss_pred             cHHHHHHHHHHHHHHHH-------------hcCchhhhcccccCCCccCCCCceEeeCCCC
Confidence             7899999999999999             99999 997 999999     7788888764

>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}

Probab=100.00  E-value=2.9e-42  Score=355.44  Aligned_cols=262  Identities=17%  Similarity=0.184  Sum_probs=179.6

Q ss_pred             eeecCCeeeCCCCcceeecCcceeEEeeccccH-HHhhh--hccceeeeeeccCCceEEEEEeecchhhHhHHHH--hhc
Q 018486           51 LVVSDGVLVPNVSVDIECSKGNRSIERIPVCSF-HEMAG--YFNEKSGISGNIPLGSFNAMFNFTGCWQADAAAT--KSL  125 (355)
Q Consensus        51 l~~p~g~~v~~v~~~i~~~k~~~~~~~sdv~~f-~~ms~--~fn~~~~L~~~ip~g~f~~~f~~s~s~~~~~a~~--ks~  125 (355)
                      +-+|..+.  +....++|+..++.++|++..++ +++++  ..+|+++|+++++...+.++++++++....+++.  ++.
T Consensus       176 ~RlP~nv~--~~~~~~~~~~~~s~e~y~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~~  253 (554)
T 3ojy_A          176 FRKPYNFL--KYHFEALADTGISSEFYDNANDLLSKVKKDKSDSFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYN  253 (554)
T ss_dssp             EEECTTEE--EEEECCCCCCCCEEEEESSHHHHHHHHC--------------------------------CTTGGGTTCC
T ss_pred             EEccceee--EEeEEEEEeeecchhhhhcHHHHHHHHHhhhccccceeeecccccceeEEEeeccccchhHHHHHHHhhc
Confidence            57888753  33456899999999999998886 34433  3467888888755556778888888877777554  222


Q ss_pred             ----ce--ecEEEEEEEEEEecCCCCcchHHHhh---CCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEee-c--c
Q 018486          126 ----AM--VGNFISLYKVKLAKLNLVLREEIRRA---VPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIRQ-H--Q  192 (355)
Q Consensus       126 ----~~--d~~~i~l~~~~l~~~~l~L~~~F~~~---LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~~-~--~  192 (355)
                          .|  ....+++|+|+|+.++++|+++|+++   ||..|++++|++||++||||||++++|||+ +++++.. +  +
T Consensus       254 ~k~~~F~~~~~~~~~~~f~l~~~~l~L~~~F~~~l~~LP~~y~~~~y~~fi~~yGTHyi~s~~lGG~~~~i~~l~~~~~~  333 (554)
T 3ojy_A          254 EKKFIFTRIFTKVQTAHFKMRKDDIMLDEGMLQSLMELPDQYNYGMYAKFINDYGTHYITSGSMGGIYEYILVIDKAKME  333 (554)
T ss_dssp             STTEEEEEEEEEEEEEEEEECSSSBCBCHHHHHHHHTCCSSCCHHHHHHHHHHHCSEEEEEEEEEEEEEEEEEEEHHHHH
T ss_pred             ccceEEEEEEEEEEEEEEEEeCCCCCCCHHHHHHHHhCCccCCHHHHHHHHHhcCcEEEEeeeeCcEEEEEEEEehhhhh
Confidence                12  34456699999998899999999995   899999999999999999999999999999 7766543 3  6


Q ss_pred             cCCCCHHHHHHHHHhhcccccc---ccccccccCcc-----------cccCCceEEEEEeecCCcc----------hhhH
Q 018486          193 SSPLSMMDIENYVKDIGDERFM---DSKSQSSAAPL-----------KYKDKDVTVIFRRRGGDDL----------EQSH  248 (355)
Q Consensus       193 ss~ls~~evk~cl~~~~~~~f~---~~~~~s~~~~~-----------~~~~~~~~vi~~~~GG~~l----------~~~~  248 (355)
                      .+++|.+|+++||+.+++++|.   .+++......|           .++....+++..++||++.          .+.|
T Consensus       334 ~sglt~~dvk~Cl~~e~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~V~GG~~~~~~~L~~~~~~~~~  413 (554)
T 3ojy_A          334 SLGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAVEDIISRVRGGSSGWSGGLAQNRSTITY  413 (554)
T ss_dssp             HTTCCHHHHHHHHHHTTTCCC-------------CCTTTTTTCSHHHHHHTTEEEEEECCBSCC----------CCCCCH
T ss_pred             hcCCCHHHHHHHHhhcccEEEeeeeeeecccccccccccccccccccccccccceEEEEEECCCccccchhhcccCHHHH
Confidence            7899999999999999988772   22222211122           2333345788899999853          3569


Q ss_pred             HHHHHhhccCCceeeeeeeehhhhcc--Cc----hhHHHHHHHHHHHHHhCCChhHHhhhhcccCCcccccCCCCC----
Q 018486          249 AKWAETVQLAPDVINMTFTPIVSLLE--GV----PGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNI----  318 (355)
Q Consensus       249 ~~W~~SV~~~P~vI~~~l~PI~eLl~--~~----p~k~~Lk~AI~~Yl~~kp~ieel~~fle~~~p~~wap~~n~~----  318 (355)
                      .+|++||+++|+||+++|.|||+||+  ++    ++|+||++||++||.             ++.||+|+||+|++    
T Consensus       414 ~~W~~Sv~~~P~vI~~~l~PI~~Lv~~~~~p~~~~kr~nL~~Ai~~Yl~-------------e~~~c~c~pC~~~g~~~~  480 (554)
T 3ojy_A          414 RSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQNLRRALDQYLM-------------EFNACRCGPCFNNGVPIL  480 (554)
T ss_dssp             HHHHHHGGGSCEEEEEEEEEGGGGGGGBTTCCCHHHHHHHHHHHHHHHH-------------HTCGGGSCCCTTTCCEEE
T ss_pred             HHHHHHHhcCCceEEEEeEeHHHhcCcccCCccHHHHHHHHHHHHHHHh-------------hcccccccccCCCCEEcC
Confidence            99999999999999999999999998  43    568999999999999             99999999999998    


Q ss_pred             --ccCCCCCCc
Q 018486          319 --QRKEPVCSS  327 (355)
Q Consensus       319 --~~~~~~~~~  327 (355)
                        ..|.+.|+.
T Consensus       481 ~gt~C~c~C~~  491 (554)
T 3ojy_A          481 EGTSCRCQCRL  491 (554)
T ss_dssp             ETTEEEECCCS
T ss_pred             CCCcccccCCC
Confidence              345555654

>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}

Probab=100.00  E-value=3.4e-42  Score=354.20  Aligned_cols=294  Identities=16%  Similarity=0.175  Sum_probs=211.8

Q ss_pred             hhccccceeeecC--------chhh--ccCCCCCCCceEEecCCCCccceeecCCeeeCCCCcceeecCcceeEEeeccc
Q 018486           12 SIQALGRGFDVTS--------DIRL--LYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVC   81 (355)
Q Consensus        12 ~~~~lG~GyD~t~--------d~r~--~~~k~~~~srli~~~~~~~~~~l~~p~g~~v~~v~~~i~~~k~~~~~~~sdv~   81 (355)
                      +++.+|.||||+.        |.+.  ..|+.      +...  + .+ +-+|.++.  .....++|+..++.++|++..
T Consensus       117 ~~~l~G~G~dilt~~~~g~vlD~~~~~G~C~~------~~~~--~-~~-yRlP~nv~--~~~~~~~~~~~~sse~y~S~~  184 (537)
T 3ojy_B          117 GIGSLASGINLFTNSFEGPVLDHRYYAGGCSP------HYIL--N-TR-FRKPYNVE--SYTPQTQGKYEFILKEYESYS  184 (537)
T ss_dssp             TGGGGGEEECTTTCCEEEECBCTTCCCSCCEE------EEET--T-EE-EEECTTEE--EEEECCCCCCCEEEEEESSHH
T ss_pred             cceecceeEEEecCccccceecccccCCccce------eecC--C-cc-EECcccce--eEeeeeeEeeecchhhhhcHH
Confidence            6788999999775        3322  33441      2221  1 22 77898853  224458999999999999988


Q ss_pred             cHH-----HhhhhccceeeeeeccCCceEEEEEeecchhhHhHHH--Hhhccee-------cEEEEEEEEEEecCCCCcc
Q 018486           82 SFH-----EMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAA--TKSLAMV-------GNFISLYKVKLAKLNLVLR  147 (355)
Q Consensus        82 ~f~-----~ms~~fn~~~~L~~~ip~g~f~~~f~~s~s~~~~~a~--~ks~~~d-------~~~i~l~~~~l~~~~l~L~  147 (355)
                      ++.     +.+.+++|+++|+.  |. .+++.++++++..++++.  +|+. .+       +..+++|+|+|+..+++|+
T Consensus       185 ~~~~~~~~~~s~~~~~~~gl~i--~~-~~~~~~~~s~s~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~l~~~~~~L~  260 (537)
T 3ojy_B          185 DFERNVTEKMASKSGFSFGFKI--PG-IFELGISSQSDRGKHYIRRTKRFS-HTKSVFLHARSDLEVAHYKLKPRSLMLH  260 (537)
T ss_dssp             HHTTTSCC-----CCCBTTTBC--CS-CEECCCTTTSSSSHHHHHHHHTTC-SCCEEEEEEEECEEEEEEEECSSSCCBC
T ss_pred             HHHHHhhhhccccccceeeeec--cc-ceeEeEeecccchHHHHHHHHHhh-ccceEEEEEEEEEEEEEEEEeCCCCCCC
Confidence            863     33345566666654  43 466667777887777765  3333 23       3345599999988889999


Q ss_pred             hHHHhh---CCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEE-eec--ccCCCCHHHHHHHHHhhcccccc----cc
Q 018486          148 EEIRRA---VPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYI-RQH--QSSPLSMMDIENYVKDIGDERFM----DS  216 (355)
Q Consensus       148 ~~F~~~---LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v-~~~--~ss~ls~~evk~cl~~~~~~~f~----~~  216 (355)
                      ++|+++   ||..|++++|++||++||||||++++|||+ +++++ +++  +.+++|.+|+++||+.++++++.    .+
T Consensus       261 ~~F~~~l~~LP~~y~~~~y~~fi~~yGTH~i~s~~lGG~~~~i~~~~~~~~~~s~~t~~evk~Cl~~~~~~~~~i~~~~~  340 (537)
T 3ojy_B          261 YEFLQRVKRLPLEYSYGEYRDLFRDFGTHYITEAVLGGIYEYTLVMNKEAMERGDYTLNNVHACAKNDFKIGGAIEEVYV  340 (537)
T ss_dssp             HHHHHHHTTCCSSCCHHHHHHHHHHHCSEEEEEEEEEECCEEEEEEEHHHHTTTTCCHHHHHHHTTTC------------
T ss_pred             HHHHHHHHhcccccCHHHHHHHHHhcCcEEEEeEeeccEEEEEEEEehHhHhhcCCCHHHHHHHHhcccceeEEeeeeee
Confidence            999985   899999999999999999999999999999 77664 433  67799999999999988875552    12


Q ss_pred             ccccccCcc-----------cccCCceEEEEEeecCCcc------------hhhHHHHHHhhccCCceeeeeeeehhhhc
Q 018486          217 KSQSSAAPL-----------KYKDKDVTVIFRRRGGDDL------------EQSHAKWAETVQLAPDVINMTFTPIVSLL  273 (355)
Q Consensus       217 ~~~s~~~~~-----------~~~~~~~~vi~~~~GG~~l------------~~~~~~W~~SV~~~P~vI~~~l~PI~eLl  273 (355)
                      +++.....|           .++....+++..++||++.            ...|.+|++||+++|+||+++|.|||+||
T Consensus       341 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~V~GG~~~~~~~L~~~~~~~~~~~~~W~~Sv~~~P~vI~~~l~PI~eLv  420 (537)
T 3ojy_B          341 SLGVSVGKCRGILNEIKDRNKRDTMVEDLVVLVRGGASEHITTLAYQELPTADLMQEWGDAVQYNPAIIKVKVEPLYELV  420 (537)
T ss_dssp             ----CCSCCTTTTTHHHHTTTSSCSEEEEEEECCSCCSTTCCCCCTSSSCCCSCHHHHHHHHHTSCEEEEEEEEEGGGGC
T ss_pred             eccccccccccccccccccccccccceeEEEEEeCCCcccchhhhcccCCCHHHHHHHHHHhhcCCceEEEEeEeHHHhc
Confidence            222111122           2233345888899999852            35799999999999999999999999999


Q ss_pred             c--Cch----hHHHHHHHHHHHHHhCCChhHHhhhhcccCCcccccCCCCC------ccCCCCCCceeEEeeccee
Q 018486          274 E--GVP----GIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNI------QRKEPVCSSLQFSLMGPKL  337 (355)
Q Consensus       274 ~--~~p----~k~~Lk~AI~~Yl~~kp~ieel~~fle~~~p~~wap~~n~~------~~~~~~~~~l~f~~~g~~l  337 (355)
                      +  ++|    +|+||++||++||.             ++.||+|+||+|++      ..|.+.|++-   +.|.-.
T Consensus       421 ~~~~ip~~~~kr~nL~~Ai~~Yl~-------------e~~~c~C~pC~~~~~~~~~gt~C~c~C~~g---~~G~~c  480 (537)
T 3ojy_B          421 TATDFAYSSTVRQNMKQALEEFQK-------------EVSSCHCAPCQGNGVPVLKGSRCDCICPVG---SQGLAC  480 (537)
T ss_dssp             CTTTCTTHHHHHHHHHHHHHHHHH-------------HTCGGGSCCCSTTCEEEEETTEEEEECCTT---EETGGG
T ss_pred             CcccCCchHHHHHHHHHHHHHHHH-------------HhCcccCCCCCcCCEEecCCCceeccCCCC---cccccc
Confidence            5  344    57999999999999             99999999999998      5677778776   346533

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=100.00  E-value=1.6e-40  Score=360.64  Aligned_cols=297  Identities=21%  Similarity=0.269  Sum_probs=207.6

Q ss_pred             HHhhccccceeeecCc-hh-----hccCCCCCCCceEEecCCCCccceeecCCeeeCCCCcceeecC-cceeEEeecccc
Q 018486           10 RYSIQALGRGFDVTSD-IR-----LLYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSK-GNRSIERIPVCS   82 (355)
Q Consensus        10 ~~~~~~lG~GyD~t~d-~r-----~~~~k~~~~srli~~~~~~~~~~l~~p~g~~v~~v~~~i~~~k-~~~~~~~sdv~~   82 (355)
                      .++++.+|.||||+.. .|     ..|..+  .-+.+... +. ..-+.+|.++..-  ...++|++ .++++++++..+
T Consensus       166 iPg~~l~G~G~dilt~~~~g~vlD~~~~~g--~C~~~~~~-~~-~~~yr~P~nv~~~--~~~~~~~~~~~sse~y~S~~~  239 (913)
T 3t5o_A          166 IPSVQLMGNGFHFLAGEPRGEVLDNSFTGG--ICKTVKSS-RT-SNPYRVPANLENV--GFEVQTAEDDLKTDFYKDLTS  239 (913)
T ss_dssp             CTTGGGGGEEEETTTTEEEEECBCSSCCCS--CCCEECCT-TS-SSCEECCTTEEEE--ECCCCCCGGGEEEEEESCGGG
T ss_pred             cchhhhhcCcEEeecCccccccccccccCC--eeeEEECC-CC-CceEecccceeeE--EEEEEEEecceeHhhhhhHHH
Confidence            3789999999997752 21     123221  01222221 11 2346789886422  33467888 889999999888


Q ss_pred             HHH-----hhhhccceeeeeeccCC-ceEEEEEeecchhhHhHHHHhhc----ce--ecEEEEEEEEEEecCCCCcchHH
Q 018486           83 FHE-----MAGYFNEKSGISGNIPL-GSFNAMFNFTGCWQADAAATKSL----AM--VGNFISLYKVKLAKLNLVLREEI  150 (355)
Q Consensus        83 f~~-----ms~~fn~~~~L~~~ip~-g~f~~~f~~s~s~~~~~a~~ks~----~~--d~~~i~l~~~~l~~~~l~L~~~F  150 (355)
                      +.+     .+..++|+++|+.  |. ...+++++++++...+.+.+++.    .|  ....+.+|+|+|+.++++|+++|
T Consensus       240 ~~~~~~~~~s~s~~~~~~~~i--~~~~s~~~~~~~s~s~~~~~~~~~s~~~~~~f~~~~~~~~~~~~~l~~~~l~L~~~F  317 (913)
T 3t5o_A          240 LGHNENQQGSFSSQGGSSFSV--PIFYSSKRSENINHNSAFKQAIQASHKKDSSFIRIHKVMKVLNFTTKAKDLHLSDVF  317 (913)
T ss_dssp             GGC-----------------C--CCCCCTTTCCCCCCTTHHHHHHHHHHTSSEEEEEEEEEEEEEEEEECSSSCCBCHHH
T ss_pred             HHHhhhhcceeecccceeecc--ccceeeeeEeeccchHHHHHHHHhhhccceEEEEEEEEEEEEEEEecCCCCCcCHHH
Confidence            643     3334455555554  32 12234455566555555433333    22  34556699999999889999999


Q ss_pred             Hhh---CCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEee-c--ccCCCCHHHHHHHHHhhccccccccccccccC
Q 018486          151 RRA---VPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIRQ-H--QSSPLSMMDIENYVKDIGDERFMDSKSQSSAA  223 (355)
Q Consensus       151 ~~~---LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~~-~--~ss~ls~~evk~cl~~~~~~~f~~~~~~s~~~  223 (355)
                      +++   ||..|++++|++||++||||||++++|||+ +++++.. +  +.++++.+|+++||+.+++++|.+++......
T Consensus       318 ~~~l~~LP~~y~~~~Y~~fi~~yGTHyits~~lGG~~~~i~~~~~~~~~~~~~t~~ev~~cl~~~~~~~~~~~~~~~~~~  397 (913)
T 3t5o_A          318 LKALNHLPLEYNSALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTEEEAKHCVRIETKKRVLFAKKTKVEH  397 (913)
T ss_dssp             HHHTTSSCSSCCHHHHHHHHHHHCSEECSEEEEEEEEEEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTSCCCCCCCCG
T ss_pred             HHHHHhCccccCHHHHHHHHHhcCcEEEEeEEeccEEEEEEEEchhhHhhcCCCHHHHHHhhheecceEEEEEeeccccC
Confidence            995   799999999999999999999999999999 7766544 3  56699999999999998888886543322111


Q ss_pred             cc-------cccCC---c-eEEEEEeecCCcc---------------hhhHHHHHHhhccCCceeeeeeeehhhhccCc-
Q 018486          224 PL-------KYKDK---D-VTVIFRRRGGDDL---------------EQSHAKWAETVQLAPDVINMTFTPIVSLLEGV-  276 (355)
Q Consensus       224 ~~-------~~~~~---~-~~vi~~~~GG~~l---------------~~~~~~W~~SV~~~P~vI~~~l~PI~eLl~~~-  276 (355)
                      .|       .++..   . .+++..++||++.               ..+|.+|++||+++|+||+|+|.|||+||+++ 
T Consensus       398 ~c~~~~~~~~~~~s~~~~~~~~~~~v~GG~~~~~~~L~~~~~~~~~~~~~~~~W~~Sv~~~P~~I~~~l~PI~eLv~~~~  477 (913)
T 3t5o_A          398 RCTTNKLSEKHEGSFIQGAEKSISLIRGGRSEYGAALAWEKGSSGLEEKTFSEWLESVKENPAVIDFELAPIVDLVRNIP  477 (913)
T ss_dssp             GGTSSTTGGGGTTCSGGGSSEEEECCBSSCHHHHHHHSCCTTSSSSSHHHHHHHHHHHHHSCEEEEEECCBGGGGCCSST
T ss_pred             cccCCCcccccccccccccccceEEEeCCCcchhhhhhhhccCCCCCHHHHHHHHHHHhhCCceeeeeeccHHHHhhccC
Confidence            11       12211   1 2777888999852               25799999999999999999999999999986 


Q ss_pred             ---hhHHHHHHHHHHHHHhCCChhHHhhhhcccCCcccccCCCCC------ccCCCCCCc
Q 018486          277 ---PGIKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNI------QRKEPVCSS  327 (355)
Q Consensus       277 ---p~k~~Lk~AI~~Yl~~kp~ieel~~fle~~~p~~wap~~n~~------~~~~~~~~~  327 (355)
                         ++|+||++||++||.             ++.||+|+||+||+      ..+.++|+.
T Consensus       478 ~~~~kr~~Lk~Ai~~Yl~-------------e~~~c~C~PC~ngg~~~l~g~~C~C~C~~  524 (913)
T 3t5o_A          478 CAVTKRNNLRKALQEYAA-------------KFDPCQCAPCPNNGRPTLSGTECLCVCQS  524 (913)
T ss_dssp             THHHHHHHHHHHHHHHHH-------------TTCGGGSCCBTTTBEEEEETTEEEEECCT
T ss_pred             chHHHHHHHHHHHHhhcc-------------ccccccCCCCCCCCEeecCCCceEEEccC
Confidence               578999999999999             99999999999999      456666665

>2rd7_A Complement component C8 alpha chain; membrane attack system, cleavage on PAIR of basic residues, complement alternate pathway, complement pathway; 2.15A {Homo sapiens} PDB: 2qqh_A

Probab=100.00  E-value=1.7e-39  Score=320.15  Aligned_cols=239  Identities=18%  Similarity=0.200  Sum_probs=182.2

Q ss_pred             eeecCCeeeCCCCcceeecCcceeEEeeccccHH-Hhhh--hccceeeeeeccCCceEEEEEeecchhhHhHHH--Hhhc
Q 018486           51 LVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFH-EMAG--YFNEKSGISGNIPLGSFNAMFNFTGCWQADAAA--TKSL  125 (355)
Q Consensus        51 l~~p~g~~v~~v~~~i~~~k~~~~~~~sdv~~f~-~ms~--~fn~~~~L~~~ip~g~f~~~f~~s~s~~~~~a~--~ks~  125 (355)
                      +.+|.++..  .....+|+..+.+++++++.++. +++.  .++|.+++++.+|...+.+++++++|..+++..  +++.
T Consensus        81 yr~P~nv~~--~~~~~~~~~~~s~~~y~S~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~s~S~~~~f~~~~~~~~  158 (367)
T 2rd7_A           81 FRKPYNFLK--YHFEALADTGISSEFYDNANDLLSKVKKDKSDSFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYN  158 (367)
T ss_dssp             EECCTTEEE--EEECCCCCCCCEEEEESSHHHHHHHHHHHTTSSEEEEECCC---CEEEEEESCCSSCCHHHHHHHHTTC
T ss_pred             eecChhhee--eeEEEEEeeecchhheecHHHHHHHHHhhhccccccccccccccceEEEEeeecccchHHHHHHHHHhh
Confidence            678988632  23358999999999999998874 3433  457888888877877889999999988777766  3322


Q ss_pred             ----ce--ecEEEEEEEEEEecCCCCcchHHHhh---CCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEe-ec--c
Q 018486          126 ----AM--VGNFISLYKVKLAKLNLVLREEIRRA---VPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIR-QH--Q  192 (355)
Q Consensus       126 ----~~--d~~~i~l~~~~l~~~~l~L~~~F~~~---LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~-~~--~  192 (355)
                          .|  ....+.+|+|+|++++++|+++|+++   ||..|++++|++||++||||||++++|||+ +++++. ++  +
T Consensus       159 ~~~~~f~~~~~~~~~~~~~l~~~~~~L~~~F~~~l~~LP~~y~~~~y~~fI~~yGTHyits~~lGG~~~~i~~~~~~~~~  238 (367)
T 2rd7_A          159 EKKFIFTRIFTKVQTAHFKMRKDDIMLDEGMLQSLMELPDQYNYGMYAKFINDYGTHYITSGSMGGIYEYILVIDKAKME  238 (367)
T ss_dssp             STTEEEEEEEEEEEEEEEEECSSSBCBCHHHHHHHHTSCSSCCHHHHHHHHHHHCSEEEEEEEEEEEEEEEEEEEHHHHH
T ss_pred             cCCcEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHhCcccCCHHHHHHHHHHcCcEEEeccccCcEEEEEEEEehHhHh
Confidence                12  23445699999998889999999995   799999999999999999999999999999 777754 33  5


Q ss_pred             cCCCCHHHHHHHHHhhcccccc-c--cccccccCccc-----------ccCCceEEEEEeecCCcc----------hhhH
Q 018486          193 SSPLSMMDIENYVKDIGDERFM-D--SKSQSSAAPLK-----------YKDKDVTVIFRRRGGDDL----------EQSH  248 (355)
Q Consensus       193 ss~ls~~evk~cl~~~~~~~f~-~--~~~~s~~~~~~-----------~~~~~~~vi~~~~GG~~l----------~~~~  248 (355)
                      +++++.+|+++|++.+++++|. .  .+++.....|.           +.....+++..++||++.          ..+|
T Consensus       239 ~s~~t~~e~~~cl~~~a~~~~~~~v~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~v~GG~~~~~~~L~~~~~~~~~  318 (367)
T 2rd7_A          239 SLGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAVEDIISRVRGGSSGWSGGLAQNRSTITY  318 (367)
T ss_dssp             HHTCCHHHHHHHHHHHTTCCC------------CHHHHHTTCCSHHHHHHTTEEEEEECCBSCCC-----------CCCH
T ss_pred             hCCCCHHHHHHHHHhhcCeeeeccceeecccCccccccccccccccccccccccceEEEEECCCccccchhccCCChHHH
Confidence            6799999999999999888772 1  11111111221           221122477788999753          2579


Q ss_pred             HHHHHhhccCCceeeeeeeehhhhcc--Cchh----HHHHHHHHHHHHH
Q 018486          249 AKWAETVQLAPDVINMTFTPIVSLLE--GVPG----IKHLARAIELYLE  291 (355)
Q Consensus       249 ~~W~~SV~~~P~vI~~~l~PI~eLl~--~~p~----k~~Lk~AI~~Yl~  291 (355)
                      .+|++||+++|+||+++|.|||+||+  ++|+    |++|++||++||.
T Consensus       319 ~~W~~Sv~~~P~~I~~~l~PI~~Ll~~~~~p~~~~kk~~Lk~Ai~~Yl~  367 (367)
T 2rd7_A          319 RSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQNLRRALDQYLM  367 (367)
T ss_dssp             HHHHHHHHHCCEEEEEEEEEGGGGGGGBTTCCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhhcCCceEEEEEEEHHHhcCcccCCccHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999  6777    9999999999984

>2qp2_A Unknown protein; toxin, unknown function; 2.00A {Photorhabdus luminescens subsp}

Probab=100.00  E-value=6.4e-40  Score=334.58  Aligned_cols=298  Identities=16%  Similarity=0.208  Sum_probs=209.0

Q ss_pred             HHHHHhhccccceeeecCch-hhccCCCCCCCceEEe-----cCCCCccceeecCCeeeCCCCcceeecCcceeEEe---
Q 018486            7 TTLRYSIQALGRGFDVTSDI-RLLYCKGAPGSRLVHI-----DEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIER---   77 (355)
Q Consensus         7 ~~~~~~~~~lG~GyD~t~d~-r~~~~k~~~~srli~~-----~~~~~~~~l~~p~g~~v~~v~~~i~~~k~~~~~~~---   77 (355)
                      .++++|+++||+||||++|+ |+.+|+.    +|+|+     ++.. ++.+.+ +| .+..+|..+.|....+++|.   
T Consensus        36 ~~~~~g~~~lG~GyDI~g~y~~~~~~k~----~V~D~~~~~~~~~~-~~~v~i-~~-~~yrvP~ni~~~~~~~~~f~s~~  108 (511)
T 2qp2_A           36 DTVIAGAEMIGTSYDVFGKYCNVGSCMN----SLFDERKINASEDN-FKKVTI-LG-KTLKVPYYIDCYSVGDLKYTNAS  108 (511)
T ss_dssp             TTBCTTGGGTTEEECTTSSSSCGGGEEE----ECBCHHHHHTCGGG-EEEEEE-TT-EEEEEETTCEEEEEEEEEEEEEE
T ss_pred             ccchhhhHhheeeeeecccccCccccCc----ceeechheecccCC-CceEee-CC-eeecCCcceEeeeccceEEEEEE
Confidence            34578999999999999997 8899993    89984     3344 556666 55 34566777877776666554   


Q ss_pred             -eccccHHHhhhhccceeeeee--ccCCceEEEEEeecchhhHhHHHHhhccee--cEEEEEEEEEEecCC--CCcchHH
Q 018486           78 -IPVCSFHEMAGYFNEKSGISG--NIPLGSFNAMFNFTGCWQADAAATKSLAMV--GNFISLYKVKLAKLN--LVLREEI  150 (355)
Q Consensus        78 -sdv~~f~~ms~~fn~~~~L~~--~ip~g~f~~~f~~s~s~~~~~a~~ks~~~d--~~~i~l~~~~l~~~~--l~L~~~F  150 (355)
                       +|+.+|++   .++.++++++  ++++|.++++|+.+.      +.+|..+|.  ...+.+|+++++.+.  ..|+++|
T Consensus       109 yeS~~ey~~---~l~~~~svsgs~~~fsgs~~a~F~~s~------~~~k~~~f~~v~~~i~~y~~~~~~~~l~~~Ls~~F  179 (511)
T 2qp2_A          109 GESIESYQS---NISSKSRIKGNYLFFSASLKVDFDTDS------LTDFENAFSRIQYTYDLYILKSSAEALKEFLKESV  179 (511)
T ss_dssp             ESSHHHHHH---HHHHTTCCSSSCCTTTTHHHHHSCTGG------GGCTTEEEEEEEEEEEEEEEECCHHHHGGGBCHHH
T ss_pred             ecCHHHHHH---HHHHhheeeeceeeeeEEEEEEecccc------ccccceEEEEEEEEEEEEEEEeChhhhhhhcCHHH
Confidence             67777655   3555666665  467776666665432      233444454  567788999988764  3899999


Q ss_pred             HhhCCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEeec-ccCCCCHHHHHHHHHhhccccccccccccccC----c
Q 018486          151 RRAVPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIRQH-QSSPLSMMDIENYVKDIGDERFMDSKSQSSAA----P  224 (355)
Q Consensus       151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~~~-~ss~ls~~evk~cl~~~~~~~f~~~~~~s~~~----~  224 (355)
                      +++|+..+++.+|++||++||||||++++|||+ ++++..+. ...+  ..++..|++......+ +.+......    .
T Consensus       180 ~k~L~~~~~~~~y~~fI~~YGTHyits~~lGG~~~y~~s~~~~~~~~--~~~is~~a~as~~~~~-~~s~~~~~~~~~~~  256 (511)
T 2qp2_A          180 KTALDKADTEEDMNDLFNTWGSHFLSGVVMGGCAQYSSSTNKYTSNL--TNSFDVVAAASFAGFI-GLSARTGNSFMEDI  256 (511)
T ss_dssp             HHHHHHCCSHHHHHHHHHHTCSEEECEEEEEEEEEEEEEEETTTSCC--SSCHHHHHHHHHHHHT-TCCCCCTTTHHHHH
T ss_pred             HHhhccccchhhHHHHHHhCCeEEEEeeecccEEEEEEeeccccccc--cceeeeEEEEEEeeee-eecccccccccccc
Confidence            999988889999999999999999999999999 65554443 2222  2344444433221111 111110000    0


Q ss_pred             ccccCCceEEEEEeecCC-----cc-----------------hhhHHHHHHhhccCCceeeee----eeehhhhccCchh
Q 018486          225 LKYKDKDVTVIFRRRGGD-----DL-----------------EQSHAKWAETVQLAPDVINMT----FTPIVSLLEGVPG  278 (355)
Q Consensus       225 ~~~~~~~~~vi~~~~GG~-----~l-----------------~~~~~~W~~SV~~~P~vI~~~----l~PI~eLl~~~p~  278 (355)
                      ..|+. ..+++..++||+     +.                 ..+|.+|++||+++|++|+|+    |.|||+||++.++
T Consensus       257 ~sf~s-~~~~~~~V~GG~~s~~d~~~~aL~~~~ps~~~~~~~~~~y~~W~~SV~~nP~vIdf~~~~sL~PI~eLV~~~~K  335 (511)
T 2qp2_A          257 KKFRS-ASNIKTHAIGGDLSRFDPFGGATSADQPSAEEIAAAKKAFEDWKASVPNAPELVNFADSNPLTGIWELCSDRTQ  335 (511)
T ss_dssp             HHHHH-TEEEEEEEESSCTTTCCTTTTCCCCSSCCHHHHHHHHHHHHHHHHHSTTSCEEEEECSSCCEEEGGGGCSCHHH
T ss_pred             ccccc-cCceEEEEECCCCcccccccceeccCCCcccccccchhHHHHHHHHhhhchheEeecCCccceeHHHhccCHHH
Confidence            12222 245666789997     21                 137999999999999999996    9999999999999


Q ss_pred             HHHHHHHHHHHHHhCCChhHHhhhhcccCCcccccCCCCC-------ccCCCCCCceeEEeecceeEecC
Q 018486          279 IKHLARAIELYLEYKPPIEDLQYFLDYQIPRVWAPQHSNI-------QRKEPVCSSLQFSLMGPKLYISP  341 (355)
Q Consensus       279 k~~Lk~AI~~Yl~~kp~ieel~~fle~~~p~~wap~~n~~-------~~~~~~~~~l~f~~~g~~l~~~~  341 (355)
                      |++||+||++||.             + ..|+|+||+||.       .+|.|.||.   -+-|+++=+..
T Consensus       336 k~~LkrAieeYl~-------------e-~~~~~~~~~~n~~~~~~~g~~c~c~cp~---g~~g~~~~~~~  388 (511)
T 2qp2_A          336 KAKLKKHFETVWA-------------P-AESAKRRVHADYIDEIIIGINNTNTPPE---GYIGLKSTKDE  388 (511)
T ss_dssp             HHHHHHHHHHTHH-------------H-HHHHTTCCCCCEEEEEEEEECTTCCCCT---TCEECBSSSBC
T ss_pred             HHHHHHHHHHHHh-------------h-cCcccccccCcceeEEecCCccCccCCC---Ccccccccccc
Confidence            9999999999999             6 567799999976       678999997   23366654443

>3kk7_A Putative cell invasion protein with MAC/perforin; STR genomics, joint center for structural genomics, JCSG; 2.46A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.64  E-value=4.7e-18  Score=169.12  Aligned_cols=265  Identities=11%  Similarity=0.102  Sum_probs=146.5

Q ss_pred             HHHHhhccccceeeec-Cchhh--ccCCCCCCCceEEecCCCCccceeecCCeeeCCCCcceeecCcceeEEeeccccHH
Q 018486            8 TLRYSIQALGRGFDVT-SDIRL--LYCKGAPGSRLVHIDEDHHAGDLVVSDGVLVPNVSVDIECSKGNRSIERIPVCSFH   84 (355)
Q Consensus         8 ~~~~~~~~lG~GyD~t-~d~r~--~~~k~~~~srli~~~~~~~~~~l~~p~g~~v~~v~~~i~~~k~~~~~~~sdv~~f~   84 (355)
                      +.....|+||+||||+ +|+-.  ..|-   +.++|||++-.    ..-|+.+.. +   .+.....+...++ +.-+| 
T Consensus        48 ~~~~~~d~LGygYdI~~G~yi~Gd~~s~---k~pVIDIekl~----~~~p~~i~~-~---~~~t~~~~~~sY~-~~d~~-  114 (541)
T 3kk7_A           48 SFTDATDFLGCSYAVENGTSIIGDFANA---KYPVVNMKKLL----ERYPSYINP-K---ELRTTETKALSYS-DFDRL-  114 (541)
T ss_dssp             -CCSGGGGTTEEECSTTSCSCTTCGGGE---EEESBCHHHHH----HHCGGGEEE-E---EEEEEEEEEEEES-STTGG-
T ss_pred             ccCccccccccccccCCCcccccCcccc---CCceeeHHHhh----hhCccceee-c---cccccceeeeecc-chhhH-
Confidence            3456899999999997 77663  2333   36999997632    223544432 1   1111111111222 21222 


Q ss_pred             HhhhhccceeeeeeccCCceEEEEEeecchhhHhHHH------HhhcceecEEEEEEEEEEecCC--C------CcchHH
Q 018486           85 EMAGYFNEKSGISGNIPLGSFNAMFNFTGCWQADAAA------TKSLAMVGNFISLYKVKLAKLN--L------VLREEI  150 (355)
Q Consensus        85 ~ms~~fn~~~~L~~~ip~g~f~~~f~~s~s~~~~~a~------~ks~~~d~~~i~l~~~~l~~~~--l------~L~~~F  150 (355)
                      +..+++-.+++.++++..|.|+.  +..+.-...|.+      +...+..--.+...++.|....  |      .|++.|
T Consensus       115 e~~s~~tKkv~s~fSln~g~Fs~--g~k~TiT~~F~s~~~~SsKysygel~v~~~~rr~~L~~s~~~L~~i~s~YLt~~F  192 (541)
T 3kk7_A          115 EKNKTFTKTVKSGFSLNLGPFKF--GRQKTIKETFVHNTDDSEKVVHGELSIEVVNGMLNLQTAPSALRKIAADYLDELF  192 (541)
T ss_dssp             GTTCTTGGGBCTTSCCCCHHHHH--HHHHHHHHHSCCCCCCGGGEEEEEEEEEEEEEEEEECCCHHHHHHHHHHCBCHHH
T ss_pred             HHHHHHHhhhccceeeecccccc--ccccceehhccccccccceeeEEEEEEeeeccEEEecCChhHHHHHHHhhchHHH
Confidence            22333333444443322222211  111222222211      1111112223446777887642  2      588999


Q ss_pred             HhhCCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEeecccCCCCHHHHHHHHHhhccccc----c----------c
Q 018486          151 RRAVPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIRQHQSSPLSMMDIENYVKDIGDERF----M----------D  215 (355)
Q Consensus       151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~~~~ss~ls~~evk~cl~~~~~~~f----~----------~  215 (355)
                      +++|-. +.+   .+||+.||||++++..+||| .+.|. ....+..+.++-++-+....++++    .          +
T Consensus       193 i~dL~n-~s~---~eIVq~YGTHVLTDI~~GGr~~alY~-g~~~~~~~~~~Kek~md~~I~As~~~~~~~~~~~~~~i~~  267 (541)
T 3kk7_A          193 VDALYN-SSM---VELMQSYGEFVLTGYYTGGRASALFY-GVDTNSIQFDSKEKDMDVAINASYEWKNKKPTAPSDTIHS  267 (541)
T ss_dssp             HHHHHH-SCH---HHHHHHHCSEEECEEEEEEEEEEEEE-EEESSCCSHHHHHHHHHHHHHHSEEEESCCCC--------
T ss_pred             HHHHhh-CCH---HHHHHhhCCeEEEEEEeccEEEEEEE-EeeccccchHHhhhhhhheeeeeeeeccccccccccccee
Confidence            998654 344   89999999999999999999 66554 333333344444443322222222    1          1


Q ss_pred             ccccc--c-----cCcccccCCceEEEEEeecCCcc-------------hhhHHHHHHhhcc--CCceeee---eeeehh
Q 018486          216 SKSQS--S-----AAPLKYKDKDVTVIFRRRGGDDL-------------EQSHAKWAETVQL--APDVINM---TFTPIV  270 (355)
Q Consensus       216 ~~~~s--~-----~~~~~~~~~~~~vi~~~~GG~~l-------------~~~~~~W~~SV~~--~P~vI~~---~l~PI~  270 (355)
                      .++.-  .     ......+.....+.....||++-             ..++..|.+||.+  +..+|++   .|.||+
T Consensus       268 ~S~n~s~~~~~g~~~Sl~kkn~~~~~~ikT~GG~~g~~i~~~~~~~~~~sIDls~W~~Sl~Ds~n~~LIDI~~~gLyPIy  347 (541)
T 3kk7_A          268 ASGNLSIGTKRENSETITNKFSALSYSIKTLGGAYGYSISTPPYDITNYSIDLTPWLQSLNDPKTHTMIDLQDGGLYPIS  347 (541)
T ss_dssp             --CEEEESCCHHHHHHHHTTEEEEEEEEEEESSSSSCSSCCCCEETTTCCEECHHHHHHTTSGGGCEEEEECTTCEEEGG
T ss_pred             eeeecccCcccccccccccccceEEEEEEeeCCCccccccccCCCCCCcceehHHhhhhhcccccceEEEcCCCCeeehH
Confidence            11110  0     00111222345555677899531             2479999999998  6889986   899999


Q ss_pred             hhccCchhHHHHHHHHHHHHHh
Q 018486          271 SLLEGVPGIKHLARAIELYLEY  292 (355)
Q Consensus       271 eLl~~~p~k~~Lk~AI~~Yl~~  292 (355)
                      +||.+...|+.|+.|+++|+..
T Consensus       348 DfI~e~n~Kqri~~t~~~~l~~  369 (541)
T 3kk7_A          348 DFILEENFKQRYNDTHMDFQYQ  369 (541)
T ss_dssp             GGCCCHHHHHHHHHHHTTSCCC
T ss_pred             HhhhchhHHHHHHHHHhhcccc
Confidence            9999998999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00