Citrus Sinensis ID: 018535

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
MATTSTFIFIGLLSLLLSASSAAPPSSGIRLGGFIRRPSSSSSSRVPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPSTHSPELEE
ccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHccccccEEEEEEccEEEEccHHHHHcccccccEEEEEEEccccccccccccccccHHHHHHcccccccccccccccccHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHccEEEccccccccccccccccHHcccccccccEEEEEccccccccccccccccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHcccccccccHHHccccccEEEEcccccccccHEEEcccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHccccEEEEEEcccHHccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEccHHHHHcccccccEEEccccccccccccccccccccHHHHHHccccccccccccEEEEEHHHHHHccHHHHHHHHHHHccccEEEEccccccEEEEEccccccccccHcEcccccccccccccccccccEEEEEEcccccccEEccccccccccHHHcccccccccHHcccccHcc
MATTSTFIFIGLLSLLLsassaappssgirlggfirrpssssssrvpffheapafrngdscntqtIHITMTLDANYLRGTMAAVLSILQhstcpqniefhflysnfepdvyssinstfpylnlkvykfdsnrvrGKISKSIRQALDQPLNYARIYLADIMPANVKRVIyldsdlvvvddigklwdvdlegrvlaapeychanfTNFFTDLFWsdrnlaktfdgrdpcyfntgVMVMNVEKwrqggysqrVEEWMVVQKQKRiyhlgslpPFLLVLAGnikgvdhrwnqhglggdniegkcrnlhpgpisllhwsgkgkpwlrldsrkpctvdhlwapydlyrpppsthspelee
MATTSTFIFIGLLSLLLSASSAAPPSSGIRLGGFIRRPSSSSSSRVPFFHeapafrngdscnTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLwapydlyrpppsthspelee
MATTSTFIFIGllslllsassaappssGIRLGGFIRRPssssssRVPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPSTHSPELEE
*****TFIFIGLLSLLLS*****************************FFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLY*************
****STFIFIGLLSLLLSASSAAPPSSGIRLG********************************TIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPSTHSPE***
MATTSTFIFIGLLSLLLSASSAAPPSSGIRLGGFIRR********VPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPP**********
**TTSTFIFIGLLSLLLSASSAAPPSSGIRLGGFIRRPSSSSSSRVPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPSTH******
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATTSTFIFIGLLSLLLSASSAAPPSSGIRLGGFIRRPSSSSSSRVPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPSTHSPELEE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query354 2.2.26 [Sep-21-2011]
Q9M8J2351 Probable galacturonosyltr yes no 0.906 0.914 0.718 1e-143
Q8VYF4361 Probable galacturonosyltr no no 0.929 0.911 0.579 1e-115
O04253346 Probable galacturonosyltr no no 0.909 0.930 0.561 1e-113
Q9FWY9361 Probable galacturonosyltr no no 0.954 0.936 0.564 1e-111
Q0V7R1345 Probable galacturonosyltr no no 0.847 0.869 0.626 1e-110
O04536390 Probable galacturonosyltr no no 0.830 0.753 0.584 1e-110
Q9LHD2365 Probable galacturonosyltr no no 0.824 0.8 0.586 1e-110
O48684393 Probable galacturonosyltr no no 0.844 0.760 0.574 1e-109
Q9S7G2341 Probable galacturonosyltr no no 0.824 0.856 0.579 1e-103
Q9LN68351 Probable galacturonosyltr no no 0.855 0.863 0.571 1e-102
>sp|Q9M8J2|GATL4_ARATH Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana GN=GATL4 PE=2 SV=1 Back     alignment and function desciption
 Score =  508 bits (1309), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 237/330 (71%), Positives = 277/330 (83%), Gaps = 9/330 (2%)

Query: 26  SSGIRLGGFIRRPSSSSSSRVPFFHEAPAFRNGDSCNTQ---TIHITMTLDANYLRGTMA 82
           +  +R+G  + +PS+ +   +P F EAPAFRNGD C T+    IHI MTLD NYLRGTMA
Sbjct: 26  TMAVRVGVILHKPSAPT---LPVFREAPAFRNGDQCGTREADQIHIAMTLDTNYLRGTMA 82

Query: 83  AVLSILQHSTCPQNIEFHFL-YSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSI 141
           AVLS+LQHSTCP+N+ FHFL   +FE D+++SI STFPYLN K+Y+FD N VR KISKSI
Sbjct: 83  AVLSLLQHSTCPENLSFHFLSLPHFENDLFTSIKSTFPYLNFKIYQFDPNLVRSKISKSI 142

Query: 142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHA 201
           RQALDQPLNYARIYLADI+P++V R+IYLDSDLVVVDDI KLW V++EG+V+AAPEYCHA
Sbjct: 143 RQALDQPLNYARIYLADIIPSSVDRIIYLDSDLVVVDDIEKLWHVEMEGKVVAAPEYCHA 202

Query: 202 NFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKR 261
           NFT++FT  FWSD  L K  +G+ PCYFNTGVMV++V KWR+G Y+Q+VEEWM +QKQKR
Sbjct: 203 NFTHYFTRTFWSDPVLVKVLEGKRPCYFNTGVMVVDVNKWRKGMYTQKVEEWMTIQKQKR 262

Query: 262 IYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWL 321
           IYHLGSLPPFLL+ AG+IK V+HRWNQHGLGGDN EG+CR LHPGPISLLHWSGKGKPWL
Sbjct: 263 IYHLGSLPPFLLIFAGDIKAVNHRWNQHGLGGDNFEGRCRTLHPGPISLLHWSGKGKPWL 322

Query: 322 RLDSRKPCTVDHLWAPYDLYRPPPSTHSPE 351
           RLDSRKPC VDHLWAPYDLYR   S HS E
Sbjct: 323 RLDSRKPCIVDHLWAPYDLYR--SSRHSLE 350
May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8VYF4|GATL7_ARATH Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1 Back     alignment and function description
>sp|O04253|GATL6_ARATH Probable galacturonosyltransferase-like 6 OS=Arabidopsis thaliana GN=GATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q9FWY9|GATL5_ARATH Probable galacturonosyltransferase-like 5 OS=Arabidopsis thaliana GN=GATL5 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7R1|GATL3_ARATH Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana GN=GATL3 PE=2 SV=1 Back     alignment and function description
>sp|O04536|GATL9_ARATH Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana GN=GATL9 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHD2|GATLA_ARATH Probable galacturonosyltransferase-like 10 OS=Arabidopsis thaliana GN=GATL10 PE=2 SV=1 Back     alignment and function description
>sp|O48684|GATL8_ARATH Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana GN=GATL8 PE=2 SV=1 Back     alignment and function description
>sp|Q9S7G2|GATL2_ARATH Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana GN=GATL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LN68|GATL1_ARATH Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
224100589347 glycosyltransferase, CAZy family GT8 [Po 0.895 0.913 0.820 1e-156
255567642350 transferase, transferring glycosyl group 0.892 0.902 0.795 1e-153
225436890356 PREDICTED: probable galacturonosyltransf 0.920 0.915 0.761 1e-150
225432474352 PREDICTED: probable galacturonosyltransf 0.878 0.883 0.776 1e-148
224110116348 glycosyltransferase, CAZy family GT8 [Po 0.951 0.968 0.762 1e-147
90657589351 hypothetical protein [Cleome spinosa] 0.943 0.951 0.714 1e-146
356520019350 PREDICTED: probable galacturonosyltransf 0.872 0.882 0.774 1e-144
449462336341 PREDICTED: probable galacturonosyltransf 0.912 0.947 0.765 1e-143
297833366351 hypothetical protein ARALYDRAFT_477926 [ 0.918 0.925 0.712 1e-142
255551543353 transferase, transferring glycosyl group 0.898 0.900 0.758 1e-142
>gi|224100589|ref|XP_002311936.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222851756|gb|EEE89303.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 266/324 (82%), Positives = 290/324 (89%), Gaps = 7/324 (2%)

Query: 28  GIRLGGFIRRPSSSSSSRVPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSI 87
           GIRL   IR+P ++    VP F EAPAFRNGDSC  Q IHI MTLDANYLRGTMAAVLSI
Sbjct: 30  GIRLS-IIRKPFAA----VPVFREAPAFRNGDSCGLQRIHIVMTLDANYLRGTMAAVLSI 84

Query: 88  LQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQ 147
           LQHSTCP+N+EFHFL+S FE +V+SSI STFPYLN K Y+FDSNRVRGKISKSIRQALDQ
Sbjct: 85  LQHSTCPENMEFHFLWSRFEREVFSSIKSTFPYLNFKFYRFDSNRVRGKISKSIRQALDQ 144

Query: 148 PLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFF 207
           PLNYARIYLADI+P++VKRVIYLDSDLVVVDDI KLW+VDLE +VLAAPEYCHANFTN+F
Sbjct: 145 PLNYARIYLADIIPSDVKRVIYLDSDLVVVDDIAKLWEVDLEEKVLAAPEYCHANFTNYF 204

Query: 208 TDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGS 267
           ++LFW D  LAKTF GR PCYFNTGVMV++VEKWRQGG +Q+VEEWM VQKQKRIYHLGS
Sbjct: 205 SNLFWLDPVLAKTFHGRRPCYFNTGVMVVDVEKWRQGGITQKVEEWMTVQKQKRIYHLGS 264

Query: 268 LPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRK 327
           LPPFLLVLAGNIKGVDHRWNQHGLGGDN+EGKCR+LHPGPISLLHWSGKGKPWLRLDSRK
Sbjct: 265 LPPFLLVLAGNIKGVDHRWNQHGLGGDNMEGKCRSLHPGPISLLHWSGKGKPWLRLDSRK 324

Query: 328 PCTVDHLWAPYDLYRPPPSTHSPE 351
           PC VDHLWAPYDLYR   S H+ E
Sbjct: 325 PCIVDHLWAPYDLYR--SSMHALE 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255567642|ref|XP_002524800.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223535984|gb|EEF37643.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225436890|ref|XP_002271296.1| PREDICTED: probable galacturonosyltransferase-like 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432474|ref|XP_002277334.1| PREDICTED: probable galacturonosyltransferase-like 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224110116|ref|XP_002315420.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222864460|gb|EEF01591.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|90657589|gb|ABD96888.1| hypothetical protein [Cleome spinosa] Back     alignment and taxonomy information
>gi|356520019|ref|XP_003528664.1| PREDICTED: probable galacturonosyltransferase-like 4-like [Glycine max] Back     alignment and taxonomy information
>gi|449462336|ref|XP_004148897.1| PREDICTED: probable galacturonosyltransferase-like 4-like, partial [Cucumis sativus] gi|449491609|ref|XP_004158951.1| PREDICTED: probable galacturonosyltransferase-like 4-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|297833366|ref|XP_002884565.1| hypothetical protein ARALYDRAFT_477926 [Arabidopsis lyrata subsp. lyrata] gi|297330405|gb|EFH60824.1| hypothetical protein ARALYDRAFT_477926 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255551543|ref|XP_002516817.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223543905|gb|EEF45431.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
TAIR|locus:2082450351 GATL4 "galacturonosyltransfera 0.901 0.908 0.721 2.1e-132
TAIR|locus:2205314345 GATL3 "galacturonosyltransfera 0.847 0.869 0.626 1.1e-108
TAIR|locus:2132218346 GATL6 "galacturonosyltransfera 0.836 0.855 0.6 2.2e-105
TAIR|locus:2081670361 GATL7 "galacturonosyltransfera 0.872 0.855 0.598 7.5e-105
TAIR|locus:2032357393 LGT9 [Arabidopsis thaliana (ta 0.807 0.727 0.608 1.1e-103
TAIR|locus:2024740361 GATL5 "galacturonosyltransfera 0.830 0.814 0.619 4.7e-103
TAIR|locus:2095420365 GATL10 "galacturonosyltransfer 0.824 0.8 0.589 1.6e-102
TAIR|locus:2020638390 LGT8 "glucosyl transferase fam 0.796 0.723 0.620 5.4e-102
TAIR|locus:2016432351 PARVUS "AT1G19300" [Arabidopsi 0.799 0.806 0.625 4.6e-101
TAIR|locus:2101724341 GATL2 "galacturonosyltransfera 0.824 0.856 0.583 3.7e-96
TAIR|locus:2082450 GATL4 "galacturonosyltransferase-like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
 Identities = 238/330 (72%), Positives = 275/330 (83%)

Query:    29 IRLGGFIRRPXXXXXXRVPFFHEAPAFRNGDSCNTQT---IHITMTLDANYLRGTMAAVL 85
             +R+G  + +P       +P F EAPAFRNGD C T+    IHI MTLD NYLRGTMAAVL
Sbjct:    29 VRVGVILHKPSAPT---LPVFREAPAFRNGDQCGTREADQIHIAMTLDTNYLRGTMAAVL 85

Query:    86 SILQHSTCPQNIEFHFL-YSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQA 144
             S+LQHSTCP+N+ FHFL   +FE D+++SI STFPYLN K+Y+FD N VR KISKSIRQA
Sbjct:    86 SLLQHSTCPENLSFHFLSLPHFENDLFTSIKSTFPYLNFKIYQFDPNLVRSKISKSIRQA 145

Query:   145 LDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFT 204
             LDQPLNYARIYLADI+P++V R+IYLDSDLVVVDDI KLW V++EG+V+AAPEYCHANFT
Sbjct:   146 LDQPLNYARIYLADIIPSSVDRIIYLDSDLVVVDDIEKLWHVEMEGKVVAAPEYCHANFT 205

Query:   205 NFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYH 264
             ++FT  FWSD  L K  +G+ PCYFNTGVMV++V KWR+G Y+Q+VEEWM +QKQKRIYH
Sbjct:   206 HYFTRTFWSDPVLVKVLEGKRPCYFNTGVMVVDVNKWRKGMYTQKVEEWMTIQKQKRIYH 265

Query:   265 LGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLD 324
             LGSLPPFLL+ AG+IK V+HRWNQHGLGGDN EG+CR LHPGPISLLHWSGKGKPWLRLD
Sbjct:   266 LGSLPPFLLIFAGDIKAVNHRWNQHGLGGDNFEGRCRTLHPGPISLLHWSGKGKPWLRLD 325

Query:   325 SRKPCTVDHLWAPYDLYRPPPSTHSPELEE 354
             SRKPC VDHLWAPYDLYR   S HS  LEE
Sbjct:   326 SRKPCIVDHLWAPYDLYRS--SRHS--LEE 351
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS
GO:0090406 "pollen tube" evidence=IDA
GO:0030048 "actin filament-based movement" evidence=RCA
TAIR|locus:2205314 GATL3 "galacturonosyltransferase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132218 GATL6 "galacturonosyltransferase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081670 GATL7 "galacturonosyltransferase-like 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032357 LGT9 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024740 GATL5 "galacturonosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095420 GATL10 "galacturonosyltransferase-like 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020638 LGT8 "glucosyl transferase family 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016432 PARVUS "AT1G19300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101724 GATL2 "galacturonosyltransferase-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M8J2GATL4_ARATH2, ., 4, ., 1, ., -0.71810.90670.9145yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 8e-73
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 2e-38
cd06429257 cd06429, GT8_like_1, GT8_like_1 represents a subfa 4e-31
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 5e-26
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 5e-24
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 6e-22
PLN02829639 PLN02829, PLN02829, Probable galacturonosyltransfe 2e-21
PLN02659534 PLN02659, PLN02659, Probable galacturonosyltransfe 5e-20
PLN02742534 PLN02742, PLN02742, Probable galacturonosyltransfe 9e-20
PLN02910657 PLN02910, PLN02910, polygalacturonate 4-alpha-gala 1e-19
PLN02867535 PLN02867, PLN02867, Probable galacturonosyltransfe 7e-19
PLN02718603 PLN02718, PLN02718, Probable galacturonosyltransfe 1e-17
PLN02523559 PLN02523, PLN02523, galacturonosyltransferase 2e-17
PLN02769629 PLN02769, PLN02769, Probable galacturonosyltransfe 4e-13
PRK15171334 PRK15171, PRK15171, lipopolysaccharide 1,3-galacto 8e-09
cd06432248 cd06432, GT8_HUGT1_C_like, The C-terminal domain o 2e-06
cd06431280 cd06431, GT8_LARGE_C, LARGE catalytic domain has c 4e-06
cd02537240 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 1e-04
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information 
 Score =  226 bits (577), Expect = 8e-73
 Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 14/260 (5%)

Query: 67  HITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF-PY-LNLK 124
            I + LD NY+ G    + S+L H++ P ++ FH L  +   +    +N+          
Sbjct: 1   VIVLALDDNYVLGAGVLIKSLLLHNSDPLHLLFHILTDDVSEENREKLNALGSQVSEVDV 60

Query: 125 VYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLW 184
           +   D   +     + + +     LNYAR+YLAD+ P    +++YLD+D++V+ D+ +L+
Sbjct: 61  LEFSDIEMLSYLTLQLLLKKYWSLLNYARLYLADLFP-KYDKILYLDADIIVLGDLDELF 119

Query: 185 DVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQG 244
           D+DL G+V AA E              W    L+       PCYFN GV+V+N++KWR+ 
Sbjct: 120 DIDLGGKVAAAVEDF--------DRYPWFKEALSAELGIPPPCYFNAGVLVINLKKWREE 171

Query: 245 GYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLH 304
             ++++ EW+   K   +  LG      +V  G +K +  R+N HGLG  +   K R L 
Sbjct: 172 NLTEKLIEWL--NKNGGLLKLGDQDILNIVFKGKVKPLPPRYNVHGLGYYS-YKKRRKLI 228

Query: 305 PGPISLLHWSGKGKPWLRLD 324
           P    ++H+ G  KPW  L 
Sbjct: 229 PENPKVIHYIGPTKPWHDLA 248

This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. Length = 248
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|185093 PRK15171, PRK15171, lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>gnl|CDD|133053 cd06431, GT8_LARGE_C, LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>gnl|CDD|133018 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 354
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
PLN02718603 Probable galacturonosyltransferase 100.0
PLN02523559 galacturonosyltransferase 100.0
PLN02742534 Probable galacturonosyltransferase 100.0
PLN02829639 Probable galacturonosyltransferase 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
PLN02870533 Probable galacturonosyltransferase 100.0
PLN02769629 Probable galacturonosyltransferase 100.0
PLN02659534 Probable galacturonosyltransferase 100.0
PLN02867535 Probable galacturonosyltransferase 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 100.0
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 100.0
PLN00176333 galactinol synthase 100.0
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 99.97
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 99.92
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 99.59
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 98.87
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 97.42
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 97.38
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 96.1
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 95.68
cd02515271 Glyco_transf_6 Glycosyltransferase family 6 compri 94.35
PLN03181453 glycosyltransferase; Provisional 93.21
KOG1950369 consensus Glycosyl transferase, family 8 - glycoge 92.08
PF03414337 Glyco_transf_6: Glycosyltransferase family 6; Inte 90.79
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 87.16
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 84.73
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 82.01
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 81.75
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 80.33
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information 
Probab=100.00  E-value=9.1e-50  Score=370.77  Aligned_cols=236  Identities=32%  Similarity=0.575  Sum_probs=191.4

Q ss_pred             eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC--CcceEEEEEecccccccccchh---
Q 018535           66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNLKVYKFDSNRVRGKISKS---  140 (354)
Q Consensus        66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~--~~~~i~~~~~~~~~~~~~is~~---  140 (354)
                      +|||+++| ||+ ++++++.|++.|++++.+++|||++++.+.+..+.+.+..  .+.+++++.++...+.+.....   
T Consensus         1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~   78 (257)
T cd06429           1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLM   78 (257)
T ss_pred             CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhh
Confidence            69999999 999 5778888999998877899999999999875444443332  3678999999765443332110   


Q ss_pred             -------------HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCccccc
Q 018535          141 -------------IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFF  207 (354)
Q Consensus       141 -------------~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~  207 (354)
                                   .+..+.++.+|+||++|+++| +++||||||+|+||++||++||++|++|+++||++|         
T Consensus        79 ~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---------  148 (257)
T cd06429          79 QLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---------  148 (257)
T ss_pred             hhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence                         134567889999999999999 699999999999999999999999999999999852         


Q ss_pred             ccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccc--cccCCCCccHHHHHhccceeecCcc
Q 018535          208 TDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQK--RIYHLGSLPPFLLVLAGNIKGVDHR  285 (354)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~--~~~~~~DQd~LN~vf~~~i~~Lp~~  285 (354)
                                          ||||||||+|+++||++++++++++|++.....  ..+.++|||+||.+|.|+++.||++
T Consensus       149 --------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~  208 (257)
T cd06429         149 --------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPS  208 (257)
T ss_pred             --------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChH
Confidence                                899999999999999999999999999865432  4467789999999999999999999


Q ss_pred             cccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCccccccccccc
Q 018535          286 WNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYD  339 (354)
Q Consensus       286 wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~  339 (354)
                      ||+++++.+....  .. ...+++||||+|+.|||+....   .+++++|++|.
T Consensus       209 wN~~~l~~~~~~~--~~-~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl  256 (257)
T cd06429         209 WHVRGLGYNYGIR--PQ-DIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL  256 (257)
T ss_pred             HcccCCccccccc--cc-ccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence            9998766542211  11 1246799999999999998643   35899999985

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens Back     alignment and domain information
>PLN03181 glycosyltransferase; Provisional Back     alignment and domain information
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1g9r_A311 Crystal Structure Of Galactosyltransferase Lgtc In 1e-07
1ss9_A311 Crystal Structural Analysis Of Active Site Mutant Q 2e-07
3tzt_A276 The Structure Of A Protein In Glycosyl Transferase 1e-04
>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 Back     alignment and structure 
Iteration: 1

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 151 YARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDL 210
           YAR+ L + + A+  +V+YLD D++V D +  LWD DL    L A         + F + 
Sbjct: 84  YARLKLGEYI-ADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGAS-------IDLFVER 135
Query: 211 FWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPP 270
               +      DG    YFN GV+++N++KWR+    +   EW  V++ K +        
Sbjct: 136 QEGYKQKIGXADGE--YYFNAGVLLINLKKWRRHDIFKXSSEW--VEQYKDVXQYQDQDI 191
Query: 271 FLLVLAGNIKGVDHRWN----QHGLGGDNIEGKC-------RNLHPGPISLLHWSGKGKP 319
              +  G +   + R+N     +    +    +        R     P+++ H+ G  KP
Sbjct: 192 LNGLFKGGVCYANSRFNFXPTNYAFXANWFASRHTDPLYRDRTNTVXPVAVSHYCGPAKP 251
Query: 320 WLR 322
           W R
Sbjct: 252 WHR 254
>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 Back     alignment and structure
>pdb|3TZT|A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. Length = 276 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 5e-68
3tzt_A276 Glycosyl transferase family 8; structural genomics 2e-54
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 1e-06
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
 Score =  215 bits (549), Expect = 5e-68
 Identities = 54/271 (19%), Positives = 97/271 (35%), Gaps = 31/271 (11%)

Query: 66  IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLN--L 123
           + I    D NY      A  S+         I FH L +       +++ +        +
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 124 KVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKL 183
           +    +     G     +         YAR+ L + +  +  +V+YLD D++V D +  L
Sbjct: 60  RFIDVNPEDFAGF---PLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPL 115

Query: 184 WDVDLEGRVLAA-PEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWR 242
           WD DL    L A  +        +   +  +D             YFN GV+++N++KWR
Sbjct: 116 WDTDLGDNWLGASIDLFVERQEGYKQKIGMAD----------GEYYFNAGVLLINLKKWR 165

Query: 243 QGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRN 302
           +    +   EW+   K    Y    +     +  G +   + R+N        +     +
Sbjct: 166 RHDIFKMSSEWVEQYKDVMQYQDQDILNG--LFKGGVCYANSRFNFMPTNYAFMANWFAS 223

Query: 303 LHPGP-----------ISLLHWSGKGKPWLR 322
            H  P           +++ H+ G  KPW R
Sbjct: 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHR 254
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Length = 263 Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Length = 333 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 99.97
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 99.97
1o7q_A289 N-acetyllactosaminide alpha-1,3- galactosyltransfe 90.47
3ioh_A298 Histo-blood group ABO system transferase; GTA, cis 85.28
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
Probab=100.00  E-value=6e-49  Score=369.24  Aligned_cols=259  Identities=18%  Similarity=0.270  Sum_probs=183.4

Q ss_pred             CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC--CcceEEEEEecccccccccchhH
Q 018535           64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNLKVYKFDSNRVRGKISKSI  141 (354)
Q Consensus        64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~--~~~~i~~~~~~~~~~~~~is~~~  141 (354)
                      ..|||++|+|++|+++++|+++||++|+++ ++++|||++++++++.++.|++..  .+.+++++.++.+.+.....   
T Consensus         4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~---   79 (276)
T 3tzt_A            4 MADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKV---   79 (276)
T ss_dssp             -CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred             eeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCcc---
Confidence            569999999999999999999999999985 679999999999987655555432  24578888887655443221   


Q ss_pred             HhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhccc
Q 018535          142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTF  221 (354)
Q Consensus       142 ~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~  221 (354)
                       ..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|+.+||++||....        |........+
T Consensus        80 -~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~--------~~~~~~~~~l  150 (276)
T 3tzt_A           80 -TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD--------MANNVNRIRL  150 (276)
T ss_dssp             -----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC-----------------------
T ss_pred             -ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch--------HHHHHHHhcC
Confidence             2345788999999999999889999999999999999999999999999999999886420        1000001112


Q ss_pred             CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCc-ccccccCCCCc--ccc
Q 018535          222 DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDH-RWNQHGLGGDN--IEG  298 (354)
Q Consensus       222 ~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~-~wN~~~~~~~~--~~~  298 (354)
                       +...+||||||||||+++||+.++++++++|++.+.  ....++|||+||.+|.++++.||+ +||++......  ...
T Consensus       151 -~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~  227 (276)
T 3tzt_A          151 -GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNH--MNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRS  227 (276)
T ss_dssp             ------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHT
T ss_pred             -CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcc--ccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccc
Confidence             223589999999999999999999999999997543  224579999999999999999999 99998521100  000


Q ss_pred             cc-ccC--CCCCCEEEEcCCCCCCCCCCCCCCCccccccccccccc
Q 018535          299 KC-RNL--HPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLY  341 (354)
Q Consensus       299 ~~-~~~--~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~  341 (354)
                      .. ...  ..++++||||+|+.|||+.....   +++++||+|...
T Consensus       228 ~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~  270 (276)
T 3tzt_A          228 KKQADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSL  270 (276)
T ss_dssp             TTCCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHH
T ss_pred             cchhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHH
Confidence            00 000  01346899999999999987543   599999999764
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ... Back     alignment and structure
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 354
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 8e-37
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 2e-12
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  132 bits (332), Expect = 8e-37
 Identities = 55/274 (20%), Positives = 98/274 (35%), Gaps = 31/274 (11%)

Query: 66  IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNL 123
           + I    D NY      A  S+         I FH L +       +++ +       N+
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 124 KVYKFDSNRVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKL 183
           +    +     G               YAR+ L + +  +  +V+YLD D++V D +  L
Sbjct: 60  RFIDVNPEDFAGFPLNIRH---ISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPL 115

Query: 184 WDVDLEGRVLAA-PEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWR 242
           WD DL    L A  +        +   +  +D             YFN GV+++N++KWR
Sbjct: 116 WDTDLGDNWLGASIDLFVERQEGYKQKIGMAD----------GEYYFNAGVLLINLKKWR 165

Query: 243 QGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRN 302
           +    +   EW+   K    Y    +     +  G +   + R+N        +     +
Sbjct: 166 RHDIFKMSSEWVEQYKDVMQYQDQDILN--GLFKGGVCYANSRFNFMPTNYAFMANWFAS 223

Query: 303 LHP-----------GPISLLHWSGKGKPWLRLDS 325
            H             P+++ H+ G  KPW R  +
Sbjct: 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCT 257
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 99.97
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 96.66
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 96.29
d1s4na_339 Glycolipid 2-alpha-mannosyltransferase {Baker's ye 90.81
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 86.32
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 82.61
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 82.49
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=2.3e-46  Score=349.53  Aligned_cols=258  Identities=21%  Similarity=0.300  Sum_probs=194.9

Q ss_pred             eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCC--cceEEEEEecccccccccchhHHh
Q 018535           66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFP--YLNLKVYKFDSNRVRGKISKSIRQ  143 (354)
Q Consensus        66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~--~~~i~~~~~~~~~~~~~is~~~~~  143 (354)
                      ||||+|+|++|+.++.|+++||++|++. ..++|||++++++++.++.+++...  +.+++++.++...+......   .
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~---~   76 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLN---I   76 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTTSCCC---C
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcccccc---c
Confidence            7999999999999999999999998874 6799999999999876666655332  44678888876554432211   2


Q ss_pred             hccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCC
Q 018535          144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDG  223 (354)
Q Consensus       144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~  223 (354)
                      .+.++.+|+||++|++|| +++||||||+|+||++||++||+++++++.+||+.|+.......     +.  . ...+ .
T Consensus        77 ~~~s~~~y~Rl~l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~-----~~--~-~~~~-~  146 (282)
T d1ga8a_          77 RHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEG-----YK--Q-KIGM-A  146 (282)
T ss_dssp             TTCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTT-----HH--H-HTTC-C
T ss_pred             cccCHHHHHHHHHhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhh-----hH--H-HhCC-C
Confidence            345778999999999999 69999999999999999999999999999999988753211100     00  0 0111 2


Q ss_pred             CCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCC---ccc---
Q 018535          224 RDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGD---NIE---  297 (354)
Q Consensus       224 ~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~---~~~---  297 (354)
                      .+.+||||||||+|+++||+.+++++++++++...  ....++||++||.+|.|++..||.+||++..++.   ...   
T Consensus       147 ~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~f~~~~~~L~~~~N~~~~~~~~~~~~~~~~  224 (282)
T d1ga8a_         147 DGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYK--DVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASR  224 (282)
T ss_dssp             TTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHT--TTCSSTHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CS
T ss_pred             CCCceeecceeeechhhhhhhhHHHHHHHHHHhcc--cCcccCchhHHHHHhcCCEEeCCHHHeeccccccccccccccc
Confidence            35789999999999999999999999999998543  2345789999999999999999999998642110   000   


Q ss_pred             ---cccc--cCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccC
Q 018535          298 ---GKCR--NLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYR  342 (354)
Q Consensus       298 ---~~~~--~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~  342 (354)
                         ...+  .....+++||||+|+.|||+.....   .+...|++|....
T Consensus       225 ~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~---~~~~~~~~~~~~~  271 (282)
T d1ga8a_         225 HTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTELAGSL  271 (282)
T ss_dssp             CCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCS---TTTHHHHHHHTTC
T ss_pred             cchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCC---hhHHHHHHHHHhh
Confidence               0000  0112457899999999999876543   4677888777654
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure