Citrus Sinensis ID: 018539

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
Protein Sequence
MATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDEN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccHHEEEEEEEccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHcccccHHHHHHHcccccc
Coil and Loop (DISEMBL)
MATAARLRYHLmasssapntqipnftrqspnfpyrlpnnpasfsqnhslsilhskvspprfelsstggggsygtghgkgggggggdgsggfsgdgdnsnskdagiwglwlngwrsrvaadpqfpFKVLMEQLVGVTACVIgdmasrpnfglneLDFVFSTLVVGSIMNFTLMYLLaptlsaapqnlpglfascptshmfepgafsfANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRkkmdpafetpnkppptvlNALTWSLHMgissnfryqTLNGIEFLlakstpevvFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDEN
Flexible Loop (DISEMBL)
MATAARLRYHLMasssapntqipnFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAetgsaeekqklvdhnden
Low Complexity Region (SEG)
MATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELsstggggsygtghgkgggggggdgsggfsgdgdnsnskdagIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDEN
Disordered region (IsUnstruct)
******************************************************************************************************AGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRK**************TVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARM*********************************
Disordered Region (DISOPRED)
****************************************************************************************************KDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLS****N***LFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKL***************PTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMT********************************
Disordered Region (DISEMBL)
MATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMT********************************
Disordered Region (DISPRO)
***AARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELSSTGG*******************************SKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKA**********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
118483602	357	unknown [Populus trichocarpa] gi|1184868	0.963	0.955	0.65	1e-109
225439101	351	PREDICTED: uncharacterized protein LOC10	0.689	0.695	0.783	1e-107
224140631	266	predicted protein [Populus trichocarpa]	0.652	0.868	0.783	1e-105
356532125	349	PREDICTED: uncharacterized protein LOC10	0.717	0.727	0.717	1e-105
255582022	680	conserved hypothetical protein [Ricinus	0.949	0.494	0.651	1e-104
449449835	370	PREDICTED: uncharacterized protein LOC10	0.717	0.686	0.739	1e-104
224069106	269	predicted protein [Populus trichocarpa]	0.649	0.855	0.791	1e-104
356568256	347	PREDICTED: uncharacterized protein LOC10	0.703	0.717	0.725	1e-103
15231951	337	uncharacterized protein [Arabidopsis tha	0.923	0.970	0.612	1e-101
297829388	338	hypothetical protein ARALYDRAFT_897000 [	0.943	0.988	0.609	1e-100

>gi|118483602|gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK95259.1| unknown [Populus trichocarpa]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/360 (65%), Positives = 270/360 (75%), Gaps = 19/360 (5%)

Query: 1   MATAA-RLRYHLMASSSAPNTQIPNFTRQS-PNFPYRLPNNPA-----SFSQNHSLSILH 53
           MATAA +LR+   A   A N     FT+Q+ P FP   PN+P+     S   N SL +LH
Sbjct: 1   MATAAAQLRFSTFARQYAAN-----FTKQNNPRFPN--PNSPSLSFPFSTPLNPSLRLLH 53

Query: 54  SKVSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGW 113
           SK  PP    +  G GGS G G    GGGGG   S   S D  +S++   G+ GL+LNGW
Sbjct: 54  SK--PPHLSNAGGGFGGSGGDGGNWSGGGGGAGDS---SSDNSSSSAAGFGVLGLFLNGW 108

Query: 114 RSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMY 173
           RSRVAADPQFPFKVLME++VGV+ACV+GDMASRPNFGL+ELDFVFSTLVVG I+NFTLMY
Sbjct: 109 RSRVAADPQFPFKVLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVVGCILNFTLMY 168

Query: 174 LLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTA 233
           LLAPT +A  Q LP +FA+CPTSHMFEPGA+   NRLGTFV+KG +FA+VGFAAGLVGTA
Sbjct: 169 LLAPTAAATSQTLPAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAVGFAAGLVGTA 228

Query: 234 ISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPE 293
           +SNGLIK+RKKMDP FETPNK PPTVLNALTW++HMG SSN RYQTLNG EFLL K    
Sbjct: 229 LSNGLIKMRKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGAEFLLEKGLSP 288

Query: 294 VVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDE 353
           + FK+SVVVLRCLNNVLGGMSFV+LARMTGSQSV   K V      +A EK+KL+D  DE
Sbjct: 289 LAFKTSVVVLRCLNNVLGGMSFVILARMTGSQSVEEPKLVDVDVGLAAPEKEKLLDGGDE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439101|ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258770 [Vitis vinifera]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/245 (78%), Positives = 213/245 (86%), Gaps = 1/245 (0%)

Query: 104 GIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
           G+ GL+LNGWRSRV+ADPQFPFKVLME+LVGVTACVIGDMASRPNFGLNELDFVFSTLVV
Sbjct: 96  GVLGLFLNGWRSRVSADPQFPFKVLMEELVGVTACVIGDMASRPNFGLNELDFVFSTLVV 155

Query: 164 GSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASV 223
           GSIMNF LMYLLAPT S+   NLP +FA CP  HMFE G++   NR GTFV+KG++FA+V
Sbjct: 156 GSIMNFVLMYLLAPTASSVTPNLPAIFAGCPPGHMFESGSYGVLNRFGTFVYKGVLFATV 215

Query: 224 GFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGI 283
           GFAAGLVGTAISNGLI +RKKMDP F TPNKPPPTVLNA+TW++HMG+SSNFRYQTLNGI
Sbjct: 216 GFAAGLVGTAISNGLISMRKKMDPNFVTPNKPPPTVLNAITWAIHMGLSSNFRYQTLNGI 275

Query: 284 EFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEE 343
           EFLLAK  P + FKSSVVVLRC NN+LGGMSFVLLAR+TGSQSV   K V  AE GS  E
Sbjct: 276 EFLLAKGLPPLAFKSSVVVLRCFNNILGGMSFVLLARLTGSQSVEEGK-VVLAEAGSDAE 334

Query: 344 KQKLV 348
           K+KLV
Sbjct: 335 KEKLV 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140631|ref|XP_002323685.1| predicted protein [Populus trichocarpa] gi|222868315|gb|EEF05446.1| predicted protein [Populus trichocarpa]

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/231 (78%), Positives = 210/231 (90%)

Query: 104 GIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
           G+ GL+LNGWRSRVAADPQFPFKVLME++VGV++C++GDMASRPNFGLNELDFVFSTLVV
Sbjct: 35  GVLGLFLNGWRSRVAADPQFPFKVLMEEVVGVSSCILGDMASRPNFGLNELDFVFSTLVV 94

Query: 164 GSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASV 223
           G+I+NFTLMYLLAPT +A  Q LP +FA+CPTSHMFEPGA+S  +RLGT V+KG++FA+V
Sbjct: 95  GAILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPGAYSLMSRLGTLVYKGIIFAAV 154

Query: 224 GFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGI 283
           GFAAGLVGT +SNGLIK+RKKMDP+FETPNKPPPTVLNALTW++HMG+SSN RYQ+LNG+
Sbjct: 155 GFAAGLVGTELSNGLIKMRKKMDPSFETPNKPPPTVLNALTWAIHMGVSSNLRYQSLNGV 214

Query: 284 EFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVA 334
           EFLLA   P   FKSSVVVLRCLNNVLGGM+FV+LARMTGSQSV   K VA
Sbjct: 215 EFLLANGLPPFAFKSSVVVLRCLNNVLGGMTFVILARMTGSQSVEESKPVA 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532125|ref|XP_003534624.1| PREDICTED: uncharacterized protein LOC100798978 [Glycine max]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/258 (71%), Positives = 218/258 (84%), Gaps = 4/258 (1%)

Query: 99  NSKDA--GIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDF 156
            SKD+  GI GL+LNGWRSRVAADPQFPFKVLME+LVGV+ACV+GDMASRPNFGLNELDF
Sbjct: 84  KSKDSSLGILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDF 143

Query: 157 VFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFK 216
           VFSTLVVG+I+NFTLMYLLAPT++++  NLP LFASCP SHMFEPGAFS  +RLGT V+K
Sbjct: 144 VFSTLVVGAILNFTLMYLLAPTMTSSASNLPALFASCPKSHMFEPGAFSLLDRLGTLVYK 203

Query: 217 GLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFR 276
           G +F+ VGF AGLVGT +SNGLIK+RKKMDP FETPNKPPPT+LNALTW+ HMGISSN R
Sbjct: 204 GTIFSVVGFGAGLVGTTLSNGLIKMRKKMDPTFETPNKPPPTILNALTWAAHMGISSNLR 263

Query: 277 YQTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAA 336
           YQTLNG+EF+L +    + FKSSV+VLRC+NNVLGGMSFV+LAR+TG+QSV  ++     
Sbjct: 264 YQTLNGVEFMLERVLNPLAFKSSVLVLRCVNNVLGGMSFVVLARLTGAQSVGGEQ--KEN 321

Query: 337 ETGSAEEKQKLVDHNDEN 354
           E     EK+K+V+   E 
Sbjct: 322 EVALIAEKEKVVESEREE 339

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582022|ref|XP_002531808.1| conserved hypothetical protein [Ricinus communis] gi|223528542|gb|EEF30565.1| conserved hypothetical protein [Ricinus communis]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 232/356 (65%), Positives = 275/356 (77%), Gaps = 20/356 (5%)

Query: 1   MATAARLRYHLMASSSAPNTQ--IPNFTRQSPNFPYRLPNNPASFSQNHSLSIL-HSKVS 57
           MATAA+LR  + AS  + +++  + N++  +P+  +     P S +QN SL ++ H K+S
Sbjct: 333 MATAAQLRCSVFASQDSTSSKSFLKNYSLSNPSIAF-----PFSNAQNPSLRLIPHPKLS 387

Query: 58  PPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRV 117
               ELS  GG GS G G G GGGG GG G    S    +S+    GI GL+LNGWRSRV
Sbjct: 388 --DHELSHGGGNGSSGIGRGYGGGGDGGSGGDSSSS---SSSFGGFGILGLFLNGWRSRV 442

Query: 118 AADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAP 177
           AADPQFPFKVLME+LVGV+ACV+GDMASRPNFGLNELDFVFSTLVVGSI+NFTLMYLLAP
Sbjct: 443 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 502

Query: 178 TLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNG 237
           T SAA   LP +FA+CP SHMFEPGAF+  NRLGT V+KG +FA+VGFAAGLVGTA+SNG
Sbjct: 503 TASAASATLPAIFANCPASHMFEPGAFTLMNRLGTAVYKGTIFAAVGFAAGLVGTALSNG 562

Query: 238 LIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFK 297
           LI +RKKMDP FETPNKPPPT+LNA+TW+LHMGISSN RYQTLNG+EF+L K  P + FK
Sbjct: 563 LITMRKKMDPTFETPNKPPPTILNAVTWALHMGISSNLRYQTLNGVEFVLEKGLPPLAFK 622

Query: 298 SSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDE 353
           SSVVVLRCLNNVLGGMSFV+LAR+TGSQSV+  K V A       EK+KL+D  +E
Sbjct: 623 SSVVVLRCLNNVLGGMSFVILARLTGSQSVAEAKPVLA-------EKEKLLDDAEE 671

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449835|ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209534 isoform 1 [Cucumis sativus] gi|449449837|ref|XP_004142671.1| PREDICTED: uncharacterized protein LOC101209534 isoform 2 [Cucumis sativus] gi|449510965|ref|XP_004163824.1| PREDICTED: uncharacterized protein LOC101229310 isoform 1 [Cucumis sativus] gi|449510969|ref|XP_004163825.1| PREDICTED: uncharacterized protein LOC101229310 isoform 2 [Cucumis sativus]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/257 (73%), Positives = 220/257 (85%), Gaps = 3/257 (1%)

Query: 100 SKDAGIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFS 159
           S   G+ GL+L GWRSRVAADPQFPFKVLME+LVGV++CV+GDMASRPNFGLNELDFVFS
Sbjct: 105 SSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFS 164

Query: 160 TLVVGSIMNFTLMYLLAPTLSAAP--QNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKG 217
           TLVVGSI+NFTLMYLLAPT +A    Q LP +FASCPTSHMFEPGAF+  +R+GTFV+KG
Sbjct: 165 TLVVGSILNFTLMYLLAPTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKG 224

Query: 218 LVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRY 277
            VFA+VG AAGLVGTA+SNGLI LRKKMDP FETPNK PPT+LNA+TW++HMG+SSN RY
Sbjct: 225 TVFAAVGLAAGLVGTALSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRY 284

Query: 278 QTLNGIEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAE 337
           QTLNG+E++LAK  P + FKSSVVVLRCLNNVLGGMSFV+LARMTGSQSV   K  A  E
Sbjct: 285 QTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKT-AGVE 343

Query: 338 TGSAEEKQKLVDHNDEN 354
             S +EK+KL++ + E 
Sbjct: 344 LDSGDEKEKLLEGDKEE 360

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069106|ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|222833469|gb|EEE71946.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/230 (79%), Positives = 204/230 (88%)

Query: 104 GIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
           G+ GL+LNGWRSRVAADPQFPFKVLME++VGV+ACV+GDMASRPNFGL+ELDFVFSTLVV
Sbjct: 38  GVLGLFLNGWRSRVAADPQFPFKVLMEEVVGVSACVLGDMASRPNFGLDELDFVFSTLVV 97

Query: 164 GSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASV 223
           G I+NFTLMYLLAPT +A  Q LP +FA+CPTSHMFEPGA+   NRLGTFV+KG +FA+V
Sbjct: 98  GCILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPGAYGLMNRLGTFVYKGTIFAAV 157

Query: 224 GFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGI 283
           GFAAGLVGTA+SNGLIK+RKKMDP FETPNK PPTVLNALTW++HMG SSN RYQTLNG 
Sbjct: 158 GFAAGLVGTALSNGLIKMRKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGA 217

Query: 284 EFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAV 333
           EFLL K    + FK+SVVVLRCLNNVLGGMSFV+LARMTGSQSV   K V
Sbjct: 218 EFLLEKGLSPLAFKTSVVVLRCLNNVLGGMSFVILARMTGSQSVEEPKLV 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568256|ref|XP_003552329.1| PREDICTED: uncharacterized protein LOC100815884 [Glycine max]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/251 (72%), Positives = 212/251 (84%), Gaps = 2/251 (0%)

Query: 104 GIWGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
           GI GL+LNGWRSRVAADPQFPFKVLME+LVGV+ACV+GDMASRPNFGLNELDFVFSTLVV
Sbjct: 86  GILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVV 145

Query: 164 GSIMNFTLMYLLAPTL-SAAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFAS 222
           G+I+NFTLMYLLAPT+ S+A  NLP LFASCP SHMFEPGAFS  +RLGT V+KG +F+ 
Sbjct: 146 GAILNFTLMYLLAPTMTSSAASNLPALFASCPKSHMFEPGAFSLLDRLGTLVYKGTIFSV 205

Query: 223 VGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNG 282
           VGF AGLVGT +SNGLIK+RKKMDP FETPNKPPPT LNALTW+ HMG+SSN RYQTLNG
Sbjct: 206 VGFGAGLVGTTLSNGLIKMRKKMDPTFETPNKPPPTFLNALTWAGHMGVSSNLRYQTLNG 265

Query: 283 IEFLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAE 342
           +EF+L +    + FKSSV+VLRC+NNV+GGMSFV+LAR+TG+QSV  ++     E     
Sbjct: 266 VEFMLERVLNPLAFKSSVLVLRCVNNVIGGMSFVVLARLTGAQSVGGEQK-KENEVALIA 324

Query: 343 EKQKLVDHNDE 353
           EK+KL    +E
Sbjct: 325 EKEKLESEREE 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231951|ref|NP_187476.1| uncharacterized protein [Arabidopsis thaliana] gi|12322723|gb|AAG51347.1|AC012562_8 unknown protein; 33915-34928 [Arabidopsis thaliana] gi|19698961|gb|AAL91216.1| unknown protein [Arabidopsis thaliana] gi|22136296|gb|AAM91226.1| unknown protein [Arabidopsis thaliana] gi|332641136|gb|AEE74657.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/341 (61%), Positives = 249/341 (73%), Gaps = 14/341 (4%)

Query: 2   ATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRF 61
           A AA+L+  L A S   + ++P     S     R P    SF +N S+  LH+  S P  
Sbjct: 3   AMAAKLQ--LSAKSDQSSVRLPRVINLS-----RDPTTRVSFPRNGSVCSLHTNFSSP-- 53

Query: 62  ELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWG---LWLNGWRSRVA 118
            L+    GG  G   G  GGG G  G GG  G      S+++  WG   L++ GWRSRVA
Sbjct: 54  HLAKPCAGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVA 113

Query: 119 ADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPT 178
           ADPQFPFKVLME++VG++ACV+GDMASRPNFGLNELDFVFSTLVVGSI+NF LMY+LAPT
Sbjct: 114 ADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPT 173

Query: 179 LSA--APQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISN 236
            +   + Q LPG+F +CP+SHMFE G+F+  NR GT V+KG+VFASVG AAGLVGTAISN
Sbjct: 174 AATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISN 233

Query: 237 GLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVF 296
           GLI LRKKMDP+FETPNKPPPTVLN+LTW+ HMG+S+N RYQTLNGIEFLLAK  P +VF
Sbjct: 234 GLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVF 293

Query: 297 KSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAE 337
           K+SV+VLRC NNV GGMSFVLLARMTGSQSV     ++  E
Sbjct: 294 KTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKE 334

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829388|ref|XP_002882576.1| hypothetical protein ARALYDRAFT_897000 [Arabidopsis lyrata subsp. lyrata] gi|297328416|gb|EFH58835.1| hypothetical protein ARALYDRAFT_897000 [Arabidopsis lyrata subsp. lyrata]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/346 (60%), Positives = 253/346 (73%), Gaps = 12/346 (3%)

Query: 2   ATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPRF 61
           A AA+L  HL A S   N ++P     S     R P    SF +N S+S LH+  S    
Sbjct: 3   AMAAKL--HLSAKSDQSNVRLPRVINLS-----RYPTTRVSFPRNDSVSSLHTNFSSTHL 55

Query: 62  ELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAADP 121
            +   GGG   G+    GGG G G G  G S +  +S+    GI+   + GWRSRVAADP
Sbjct: 56  GVPCAGGGDGGGSIGNHGGGSGSGGGGYGGSEEEGSSSWGPIGIF---IQGWRSRVAADP 112

Query: 122 QFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPT-LS 180
           QFPFKVLME+LVGV+A V+GDMASRPNFGLNELDFVFSTLVVGSI+NFTLMYLLAP+ +S
Sbjct: 113 QFPFKVLMEELVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPSAVS 172

Query: 181 AAPQNL-PGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLI 239
               NL PG+F SCP+SHMFE G+F+  NR GT V+KG+VFA+VG AAGLVGTAISNGLI
Sbjct: 173 HGSSNLLPGIFRSCPSSHMFEQGSFTIMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLI 232

Query: 240 KLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSS 299
            LRKKMDP+FETPNKPPPT+LN+LTW+ HMG+S+N RYQTLNG EFLL KS P +VFK+S
Sbjct: 233 MLRKKMDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLPPLVFKTS 292

Query: 300 VVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQ 345
           V+VLR +NNVLGGMSFV+LARMTGSQSV  +K +  +E    E++ 
Sbjct: 293 VIVLRVVNNVLGGMSFVILARMTGSQSVEEEKKIEMSEISEKEKED 338

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.652	0.685	0.751	7.7e-97
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.672	0.702	0.730	1.6e-94
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.607	0.497	0.333	1.2e-26
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.593	0.484	0.362	1.2e-25
TAIR|locus:505006615	386	AT5G12470 "AT5G12470" [Arabido	0.615	0.564	0.314	1.5e-21
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.485	0.230	0.287	4.4e-12
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.483	0.232	0.285	8.6e-12
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.627	0.426	0.271	1.3e-07

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
 Identities = 175/233 (75%), Positives = 203/233 (87%)

Query:   107 GLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSI 166
             GL++ GWRSRVAADPQFPFKVLME++VG++ACV+GDMASRPNFGLNELDFVFSTLVVGSI
Sbjct:   102 GLFIQGWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSI 161

Query:   167 MNFTLMYLLAPTLSA--APQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVG 224
             +NF LMY+LAPT +   + Q LPG+F +CP+SHMFE G+F+  NR GT V+KG+VFASVG
Sbjct:   162 LNFVLMYMLAPTAATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVG 221

Query:   225 FAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIE 284
              AAGLVGTAISNGLI LRKKMDP+FETPNKPPPTVLN+LTW+ HMG+S+N RYQTLNGIE
Sbjct:   222 LAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIE 281

Query:   285 FLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAE 337
             FLLAK  P +VFK+SV+VLRC NNV GGMSFVLLARMTGSQSV     ++  E
Sbjct:   282 FLLAKVLPPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKE 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 902 (322.6 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
 Identities = 176/241 (73%), Positives = 205/241 (85%)

Query:   107 GLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSI 166
             GL++ GWRSRVAAD QFPFKVLME LVGV+A V+GDMASRPNFGLNELDFVFSTLVVGSI
Sbjct:    99 GLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSI 158

Query:   167 MNFTLMYLLAPT-LSAAPQNL-PGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVG 224
             +NFTLMYLLAP+ +S    NL PG+F SCP+SHMFE G F+  NR GT V+KG+VFA+VG
Sbjct:   159 LNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVG 218

Query:   225 FAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIE 284
              AAGLVGTAISNGLI LRKK+DP+FETPNKPPPT+LN+LTW+ HMG+S+N RYQTLNG E
Sbjct:   219 LAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAE 278

Query:   285 FLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEK 344
             FLL KS P +VFK+SV+ LR +NNVLGGMSFV LARMTGSQSV  +K +  +E  S +EK
Sbjct:   279 FLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEKKIEMSEI-SEKEK 337

Query:   345 Q 345
             +
Sbjct:   338 E 338

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 80/240 (33%), Positives = 130/240 (54%)

Query:   107 GLWLNGW---RSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
             G  +  W   R+R+ ADP F FK+  E ++      + ++  R      E +   + L+V
Sbjct:   197 GFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLV 256

Query:   164 GSIMNFTLMYLLAPTLS-AAPQNLPG-----LFA--SCPTSHMFE---PGA-FSFANRLG 211
             G+++N  L+ +LAP +    P   PG     +FA  + P+S +FE   PG  FS   RL 
Sbjct:   257 GTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSS-VFEAERPGCRFSAQQRLA 315

Query:   212 TFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKP-PPTVLNALTWSLHMG 270
             T+ +KG+++ +VGF  G+VG  I+N ++  ++ ++ + E  N P PP + +A  W + + 
Sbjct:   316 TYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEE--NIPVPPLIKSAALWGVFLS 373

Query:   271 ISSNFRYQTLNGIEFLL-----AKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
             +SSN RYQ +NG+E ++     AK  P      +V V R  NN+ GGM FV  AR++G Q
Sbjct:   374 VSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RLANNIYGGMQFVDWARLSGCQ 432

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 83/229 (36%), Positives = 120/229 (52%)

Query:   114 RSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMY 173
             R+R+ ADP F FKV  E  +        ++  R     +E +   + L+VG +++  L+ 
Sbjct:   207 RNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVG 266

Query:   174 LLAPTLSAAPQNLP--GLF-------ASCPTSHMFE---PGA-FSFANRLGTFVFKGLVF 220
             LLAP       ++   GLF       AS P+S +FE   PG  FS   R+ TF +KGL++
Sbjct:   267 LLAPYARIGKPSVASTGLFKDLKRACASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLY 325

Query:   221 ASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTL 280
              SVGF  GL+G  I+N LI   K+     E     PP   +A  W + +G+SSN RYQ +
Sbjct:   326 GSVGFGCGLIGQGIAN-LIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQII 384

Query:   281 NGIEFLLAKSTPE----VVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
             NG+E ++  ST      VV  +  V +R  NNV GGM FV  A+++G Q
Sbjct:   385 NGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:505006615 AT5G12470 "AT5G12470" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 74/235 (31%), Positives = 115/235 (48%)

Query:   106 WGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASR-PNFGLNELDFVFSTLVVG 164
             W +   G+R R+ AD  F  K+ ME  VG+      +   R  NF  NEL+ VF+ + + 
Sbjct:   151 WLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENF-FNELEVVFADVAMA 209

Query:   165 SIMNFTLMYLLAPTLSAAPQ------NLPGLFASCPTSHMFEPG----AFSFANRLGTFV 214
              I +F L+YL APT+S  P        +   F +CP  + F+      +++   RLG   
Sbjct:   210 IIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCP-DNAFQVALSGTSYTLLQRLGAIT 268

Query:   215 FKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSN 274
               G    +VG  + LVGTAI+N  IK RK +D   E   +  P V  ++ + ++M +SSN
Sbjct:   269 RNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSN 328

Query:   275 FRYQTLNGI--EFLLAKSTPE--VVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
              RYQ + G+  + LL     +  +   +    +R  N  LG + +V  AR+ G Q
Sbjct:   329 LRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 54/188 (28%), Positives = 89/188 (47%)

Query:   112 GWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTL 171
             G+R R+ ADP+F  ++ +E+ + +T  +I     R      E+D+V +  V GS+++F  
Sbjct:   476 GFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFT 535

Query:   172 MYLLAPTLS--------AAPQN---LPGLFASCPTSHMFEPGA---FSFANRLGTFVFKG 217
             ++L APTLS          P +   L GL  S P +   +  A   ++   R+ + +  G
Sbjct:   536 VWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGG 595

Query:   218 LVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPP--PTVLNALTWSLHMGISSNF 275
             L  A VG  +       SN L   RK + P      KP   P +  A+ +   +G S+N 
Sbjct:   596 LKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANL 655

Query:   276 RYQTLNGI 283
             RYQ + G+
Sbjct:   656 RYQIIAGL 663

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
 Identities = 54/189 (28%), Positives = 90/189 (47%)

Query:   112 GWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTL 171
             G+R R+ ADP+F  ++ +E+ + +T  ++     R      ELD+V +  V  S+++F  
Sbjct:   467 GFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFT 526

Query:   172 MYLLAPTLS--------AAPQN---LPGLFASCPTSHMFEPGA----FSFANRLGTFVFK 216
             ++L APTLS          P +   L GL  S P  + F+       ++ + R+ + +  
Sbjct:   527 VWLPAPTLSFISYADETIGPNSIDALRGLLGSIP-DNAFQKSLGGQEWTLSLRIASVIIG 585

Query:   217 GLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPN--KPPPTVLNALTWSLHMGISSN 274
             GL  A VG  +       SN L  +RK + P        K  P +  AL +  ++G SSN
Sbjct:   586 GLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSN 645

Query:   275 FRYQTLNGI 283
              RYQ + G+
Sbjct:   646 IRYQIIAGL 654

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 64/236 (27%), Positives = 99/236 (41%)

Query:   116 RVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLL 175
             R+ ADP F +K+L+EQ   V   V  ++ +R N    E D     ++  S  N   ++LL
Sbjct:   240 RMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLL 299

Query:   176 APTLSAAPQ---NLPGLFASCPTSHMFEPG----AFSFANRLGTFVFKGLVFASVGFAAG 228
             AP  S       +L       P +++FE       F    R  +  +K    + +G AAG
Sbjct:   300 APCRSYGNTFRFDLQNTLQKLP-NNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAG 358

Query:   229 LVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLA 288
              +  ++SN L    KK +    T    P    NAL +   +GI +N RYQ L G E  ++
Sbjct:   359 TLQGSLSNVLAG--KKKNRVSVTV---PSISTNALGYGAFLGIYANLRYQLLCGFERGVS 413

Query:   289 KSTPEV-VFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEE 343
                  + V       LR +N  LG  S  +   +       +D  +A A    +EE
Sbjct:   414 SHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAKAYNRPSEE 469


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      354       313   0.00081  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  204 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.81u 0.10s 23.91t   Elapsed:  00:00:01
  Total cpu time:  23.81u 0.10s 23.91t   Elapsed:  00:00:01
  Start:  Mon May 20 17:57:20 2013   End:  Mon May 20 17:57:21 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	354
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	3e-68
pfam05918	543	pfam05918, API5, Apoptosis inhibitory protein 5 (A	5e-04
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	9e-04

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  211 bits (540), Expect = 3e-68
 Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 11/180 (6%)

Query: 115 SRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYL 174
            R+ ADP F FK+ ME+++ + A  + ++  R      E D V + L+VGS++NF L+YL
Sbjct: 1   ERLLADPSFLFKLAMEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYL 60

Query: 175 LAPTLS------AAPQNLPGLFASCPTSHMFEPG----AFSFANRLGTFVFKGLVFASVG 224
           LAPT S           L     S P S++FE G    ++S   R GT  +KG   A+VG
Sbjct: 61  LAPTRSFGSTAAEMAGGLRKFLGSLP-SNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVG 119

Query: 225 FAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIE 284
           F AGLVG AISN L+  RK +D   E   K PP    AL W   +G+S+N RYQ LNG+E
Sbjct: 120 FIAGLVGQAISNALMAARKAVDKNSEESVKVPPLFKTALLWGAFLGVSANLRYQLLNGLE 179

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

>gnl|CDD|218811 pfam05918, API5, Apoptosis inhibitory protein 5 (API5)

 Score = 41.6 bits (97), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 14/42 (33%)

Query: 56  VSPPRFELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDN 97
                 E  S  G    G G  +G G GGG G G     G  
Sbjct: 502 YVNKSGEGISKVGQSYGGRGRTRGRGRGGGGGRGRGYNRGFW 543

This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms. Apoptosis or programmed cell death is a physiological form of cell death that occurs in embryonic development and organ formation. It is characterized by biochemical and morphological changes such as DNA fragmentation and cell volume shrinkage. API5 is an anti apoptosis gene located in human chromosome 11, whose expression prevents the programmed cell death that occurs upon the deprivation of growth factors. Length = 543

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 41.0 bits (96), Expect = 9e-04
 Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 7/117 (5%)

Query: 12  MASSSAPNTQIPNFTRQSPNFPYRLPNN----PASFSQNHSLSILHSKVSPPRFELSSTG 67
           M S++A  +   +  + S        +      AS  +  + +   S  +     L + G
Sbjct: 7   MVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSASLVANG 66

Query: 68  GGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLN--GWRSRVAADPQ 122
                      GGGGGGG G GGF G G        G W  WL         A + Q
Sbjct: 67  AVALLSASAISGGGGGGGGGFGGF-GGGGGGGGGGGGGWRFWLRLFAPADAHADEEQ 122

Length = 796

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	354
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0
COG1512	271	Beta-propeller domains of methanol dehydrogenase t	81.55

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=1.1e-71  Score=502.51  Aligned_cols=169  Identities=51%  Similarity=0.849  Sum_probs=162.5

Q ss_pred             hhhccCCCchhHHHHHHhhhhheeeeEeeccCCCcchhHHHHHHHhhhHHHHHHHHhhhhcccccccC---C----CCCc
Q 018539          115 SRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLSAA---P----QNLP  187 (354)
Q Consensus       115 ~RlLADP~FlfKL~~E~vI~i~~~v~aE~~~R~~~f~~ElDfV~sdvv~gsv~nf~LVwlLAPt~s~s---a----~~l~  187 (354)
                      |||||||+|||||++||+||++|+++|||++|+|+||+|||||+||+++++|+||+||||||||++..   .    ..++
T Consensus         1 ~RllADP~Fl~Kl~~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~   80 (180)
T PF11891_consen    1 ERLLADPSFLFKLAIEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQ   80 (180)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999941   1    3578


Q ss_pred             cccccCCCCCccCCC----CCchhhhHHHHhhcchhhhhhhhhHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCchhhhHH
Q 018539          188 GLFASCPTSHMFEPG----AFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNAL  263 (354)
Q Consensus       188 ~~f~s~Ppnn~Fe~~----~fsl~qR~~a~v~KGa~l~~VG~~aGlvG~~lsN~Li~~Rk~~d~s~e~~~~~pPvl~tAl  263 (354)
                      ++|++|| +|+||++    +||++||++||+|||++|++|||+||++|+++||+|+++||++||+||.++++|||++||+
T Consensus        81 ~~~~~~P-~n~Fq~~~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~  159 (180)
T PF11891_consen   81 KFLGSLP-NNAFQKGYPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTAL  159 (180)
T ss_pred             HHHHhCh-HHHhccCCCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHH
Confidence            8999999 6899986    4999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccchhhHHHHHhHH
Q 018539          264 TWSLHMGISSNFRYQTLNGIE  284 (354)
Q Consensus       264 ~wg~fMGvSSNlRYQil~GiE  284 (354)
                      +||+|||+|||+|||+|||+|
T Consensus       160 ~~g~fmGvSsNlRYQil~GiE  180 (180)
T PF11891_consen  160 GWGAFMGVSSNLRYQILNGIE  180 (180)
T ss_pred             HHHHHHhhhHhHHHHHHcCCC
Confidence            999999999999999999997

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]

Probab=81.55  E-value=1.6  Score=42.91  Aligned_cols=8  Identities=75%  Similarity=1.485  Sum_probs=3.6

Q ss_pred             CCCCCCCC
Q 018539           83 GGGDGSGG   90 (354)
Q Consensus        83 ggg~~~gg   90 (354)
                      |||+++||
T Consensus       257 gGGgS~GG  264 (271)
T COG1512         257 GGGGSSGG  264 (271)
T ss_pred             CCCCCCCC
Confidence            44444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	354
2pk2_A	358	Cyclin-T1, protein TAT; TAR, twinning, transcripti	93.72

>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C

Probab=93.72  E-value=0.012  Score=56.98  Aligned_cols=10  Identities=0%  Similarity=0.202  Sum_probs=0.0

Q ss_pred             CchhHHHHHH
Q 018539          122 QFPFKVLMEQ  131 (354)
Q Consensus       122 ~FlfKL~~E~  131 (354)
                      -|=--+++..
T Consensus       317 ~~~~~~~~~~  326 (358)
T 2pk2_A          317 NYHCQLCFLR  326 (358)
T ss_dssp             ----------
T ss_pred             ceecHHHhcc
Confidence            3444444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00