Citrus Sinensis ID: 018617

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
cccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEccEEcccccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccEEEEcccccccccccEEcccccEEEcccccccccccEEEEEccccEEEEccc
cccccccccccHHHHHHHcccHHHcccccHHHHcccccccccEEEEcccccHHHHHHHHHccccccccccccccccccccccccccccccccccHcccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccEEccccHHHcccccEEEEccEEEcccccccEcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccEEcccccEEEccccccEEEEEcccccccccEEccccEEEEccEEEcccccEEEccccccEEEcccccEEEcEEEEEEccccEEEcccc
mvggacslqlqprllssfvgnrfihstqplnqlfgynsgknqVSMQLSRTFSGLADLLFnrrnldaepnrrrkrlrpgkvsphrpvpdhiprppyvnsqkpigivsgpevhdekgieCMRVSGRLAAQVLEYAGtlvkpgittdEIDKAVHQMIIdngaypsplgyggfpksvctsvnecichgipdsraledgdtiniDVTVYLngyhgdtsatffcgdvdDEARNLVKVTKDCLHKAIsvcapgmeykkIGKTIQDHADRYNYGVVRQFVGhgigrvfhadpvvlhyrnndhgrmvlnqtftiepmltigsinpvmwddnwtivtedgslsaqfEHTILITRDGAEILTQC
mvggacslqlqPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFnrrnldaepnrrrkrlrpgkvsphrpvpdhiprppyvnsqkPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAgtlvkpgiTTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIpdsraledgdTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAisvcapgmeyKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
*******LQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFN*******************************************IV****VHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEI****
**GGAC*LQLQPRLLSSFVGNRFIHSTQPL*******************TFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNS*************DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
*****CSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query353 2.2.26 [Sep-21-2011]
Q9FV50350 Methionine aminopeptidase yes no 0.977 0.985 0.779 1e-160
Q9FV52369 Methionine aminopeptidase no no 0.866 0.829 0.611 1e-108
Q9FV51344 Methionine aminopeptidase no no 0.798 0.819 0.6 5e-94
Q54VU7404 Methionine aminopeptidase yes no 0.784 0.685 0.535 9e-82
P0A5J3285 Methionine aminopeptidase yes no 0.787 0.975 0.535 4e-79
P0A5J2285 Methionine aminopeptidase yes no 0.787 0.975 0.535 4e-79
Q54WU3367 Methionine aminopeptidase no no 0.875 0.841 0.436 3e-75
A6QLA4386 Methionine aminopeptidase yes no 0.801 0.733 0.493 7e-75
P53582386 Methionine aminopeptidase yes no 0.801 0.733 0.489 2e-74
Q5RBF3386 Methionine aminopeptidase yes no 0.801 0.733 0.489 2e-74
>sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 Back     alignment and function desciption
 Score =  566 bits (1458), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/345 (77%), Positives = 302/345 (87%)

Query: 9   QLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEP 68
            LQPRL+SSF+GN  I STQPL  LF ++ G+  VSMQLSRTFSGL DLLFNRRN D   
Sbjct: 6   SLQPRLISSFLGNNSIRSTQPLIHLFRFDLGRRHVSMQLSRTFSGLTDLLFNRRNEDEVI 65

Query: 69  NRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQ 128
           + +RKRLRPG VSP RPVP HI +PPYV+S +  GI SG EVHD+KGIECMR SG LAA+
Sbjct: 66  DGKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAAR 125

Query: 129 VLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188
           V +YAGTLVKPG+TTDEID+AVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDS
Sbjct: 126 VRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 185

Query: 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 248
           R LEDGD INIDVTVYLNGYHGDTSATFFCG+VD++A+ LV+VTK+ L KAIS+C PG+E
Sbjct: 186 RPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVE 245

Query: 249 YKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPM 308
           YKKIGK I D AD++ YGVVRQFVGHG+G VFHADPVVLH+RNN+ GRMVLNQTFTIEPM
Sbjct: 246 YKKIGKVIHDLADKHKYGVVRQFVGHGVGSVFHADPVVLHFRNNEAGRMVLNQTFTIEPM 305

Query: 309 LTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 353
           LTIGS NP+MWDDNWT+VTED SLSAQFEHTILIT+DGAEILT+C
Sbjct: 306 LTIGSRNPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILTKC 350
Removes the N-terminal methionine from nascent proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 Back     alignment and function description
>sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 Back     alignment and function description
>sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 Back     alignment and function description
>sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=map PE=3 SV=1 Back     alignment and function description
>sp|P0A5J2|AMPM2_MYCTU Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis GN=map PE=1 SV=1 Back     alignment and function description
>sp|Q54WU3|AMPM1_DICDI Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1 PE=3 SV=1 Back     alignment and function description
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query353
224081610350 predicted protein [Populus trichocarpa] 0.991 1.0 0.821 1e-173
225438676350 PREDICTED: methionine aminopeptidase 1D, 0.991 1.0 0.832 1e-172
356496878356 PREDICTED: methionine aminopeptidase 1D, 0.997 0.988 0.809 1e-169
449460600352 PREDICTED: methionine aminopeptidase 1D, 0.966 0.968 0.806 1e-164
297798178350 hypothetical protein ARALYDRAFT_912645 [ 0.977 0.985 0.788 1e-160
18419957350 methionine aminopeptidase 1D [Arabidopsi 0.977 0.985 0.779 1e-159
357482963351 Methionine aminopeptidase [Medicago trun 0.946 0.951 0.784 1e-156
125541226346 hypothetical protein OsI_09032 [Oryza sa 0.960 0.979 0.728 1e-147
413939015348 hypothetical protein ZEAMMB73_862792 [Ze 0.940 0.954 0.752 1e-147
242066608348 hypothetical protein SORBIDRAFT_04g03401 0.940 0.954 0.752 1e-146
>gi|224081610|ref|XP_002306464.1| predicted protein [Populus trichocarpa] gi|222855913|gb|EEE93460.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 290/353 (82%), Positives = 320/353 (90%), Gaps = 3/353 (0%)

Query: 1   MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFN 60
           MVG +    LQPRLLSSFVG+R + S QP+++LF Y  G   VSMQLSRT SGL +LLFN
Sbjct: 1   MVGTS---SLQPRLLSSFVGDRLLLSKQPVSRLFLYKPGNKHVSMQLSRTLSGLTNLLFN 57

Query: 61  RRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMR 120
           RRNLD  PN  ++RLRPGK+SP RPVPDHIPRPPYVNS++P GI SG EVHDE GIECMR
Sbjct: 58  RRNLDEVPNAEQQRLRPGKLSPRRPVPDHIPRPPYVNSRQPPGIASGAEVHDENGIECMR 117

Query: 121 VSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180
            SG+LAAQVL+YAGTLVKPGI TD+ID+AVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC
Sbjct: 118 SSGKLAAQVLQYAGTLVKPGIKTDDIDQAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 177

Query: 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAI 240
           ICHGIPDSRALEDGD INIDVTVYLNGYHGDTSATFFCGDVDDEAR LV+VT++CL++AI
Sbjct: 178 ICHGIPDSRALEDGDIINIDVTVYLNGYHGDTSATFFCGDVDDEARKLVQVTEECLYRAI 237

Query: 241 SVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLN 300
           S+CAPG+EYKKIGKTI DHADRY+YGVVR FVGHG+GRVFHADPVV H+RNND GRM+LN
Sbjct: 238 SICAPGVEYKKIGKTIHDHADRYSYGVVRHFVGHGVGRVFHADPVVQHFRNNDGGRMMLN 297

Query: 301 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 353
           QTFTIEPMLTIGS+NPVMWDDNWT+VTEDGSLSAQFEHTILIT+DGAEILTQC
Sbjct: 298 QTFTIEPMLTIGSVNPVMWDDNWTVVTEDGSLSAQFEHTILITKDGAEILTQC 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225438676|ref|XP_002282060.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Vitis vinifera] gi|296082435|emb|CBI21440.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356496878|ref|XP_003517292.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|449460600|ref|XP_004148033.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Cucumis sativus] gi|449502729|ref|XP_004161726.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297798178|ref|XP_002866973.1| hypothetical protein ARALYDRAFT_912645 [Arabidopsis lyrata subsp. lyrata] gi|297312809|gb|EFH43232.1| hypothetical protein ARALYDRAFT_912645 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18419957|ref|NP_568014.1| methionine aminopeptidase 1D [Arabidopsis thaliana] gi|75172582|sp|Q9FV50.1|AMP1D_ARATH RecName: Full=Methionine aminopeptidase 1D, chloroplastic/mitochondrial; Short=MAP 1D; Short=MetAP 1D; AltName: Full=Peptidase M 1D; Flags: Precursor gi|11320960|gb|AAG33977.1|AF250963_1 methionine aminopeptidase-like protein [Arabidopsis thaliana] gi|21553973|gb|AAM63054.1| methionyl aminopeptidase-like protein [Arabidopsis thaliana] gi|26451668|dbj|BAC42930.1| putative ap2 methionine aminopeptidase [Arabidopsis thaliana] gi|28973551|gb|AAO64100.1| putative methionyl aminopeptidase [Arabidopsis thaliana] gi|332661340|gb|AEE86740.1| methionine aminopeptidase 1D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357482963|ref|XP_003611768.1| Methionine aminopeptidase [Medicago truncatula] gi|355513103|gb|AES94726.1| Methionine aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|125541226|gb|EAY87621.1| hypothetical protein OsI_09032 [Oryza sativa Indica Group] gi|125583775|gb|EAZ24706.1| hypothetical protein OsJ_08477 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|413939015|gb|AFW73566.1| hypothetical protein ZEAMMB73_862792 [Zea mays] Back     alignment and taxonomy information
>gi|242066608|ref|XP_002454593.1| hypothetical protein SORBIDRAFT_04g034010 [Sorghum bicolor] gi|241934424|gb|EES07569.1| hypothetical protein SORBIDRAFT_04g034010 [Sorghum bicolor] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query353
TAIR|locus:2115125350 MAP1D "methionine aminopeptida 0.974 0.982 0.781 5.5e-148
TAIR|locus:2205329369 MAP1C "methionine aminopeptida 0.866 0.829 0.614 3e-101
TAIR|locus:2085979344 MAP1B "methionine aminopeptida 0.773 0.793 0.612 1.1e-87
DICTYBASE|DDB_G0280127404 map1d "methionine aminopeptida 0.824 0.720 0.521 7.1e-77
FB|FBgn0032247317 CG5188 [Drosophila melanogaste 0.835 0.930 0.489 1.7e-75
UNIPROTKB|P0A5J2285 map "Methionine aminopeptidase 0.787 0.975 0.535 4.5e-75
WB|WBGene00003129371 map-1 [Caenorhabditis elegans 0.784 0.746 0.5 2.9e-71
DICTYBASE|DDB_G0279433367 metap1 "methionine aminopeptid 0.787 0.757 0.473 3.7e-71
UNIPROTKB|A6QLA4386 METAP1 "Methionine aminopeptid 0.790 0.722 0.496 7.7e-71
UNIPROTKB|F1PSB4386 METAP1 "Methionine aminopeptid 0.790 0.722 0.493 1.3e-70
TAIR|locus:2115125 MAP1D "methionine aminopeptidase 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1445 (513.7 bits), Expect = 5.5e-148, P = 5.5e-148
 Identities = 269/344 (78%), Positives = 302/344 (87%)

Query:    10 LQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPN 69
             LQPRL+SSF+GN  I STQPL  LF ++ G+  VSMQLSRTFSGL DLLFNRRN D   +
Sbjct:     7 LQPRLISSFLGNNSIRSTQPLIHLFRFDLGRRHVSMQLSRTFSGLTDLLFNRRNEDEVID 66

Query:    70 RRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQV 129
              +RKRLRPG VSP RPVP HI +PPYV+S +  GI SG EVHD+KGIECMR SG LAA+V
Sbjct:    67 GKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARV 126

Query:   130 LEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR 189
              +YAGTLVKPG+TTDEID+AVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR
Sbjct:   127 RDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR 186

Query:   190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY 249
              LEDGD INIDVTVYLNGYHGDTSATFFCG+VD++A+ LV+VTK+ L KAIS+C PG+EY
Sbjct:   187 PLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVEY 246

Query:   250 KKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPML 309
             KKIGK I D AD++ YGVVRQFVGHG+G VFHADPVVLH+RNN+ GRMVLNQTFTIEPML
Sbjct:   247 KKIGKVIHDLADKHKYGVVRQFVGHGVGSVFHADPVVLHFRNNEAGRMVLNQTFTIEPML 306

Query:   310 TIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 353
             TIGS NP+MWDDNWT+VTED SLSAQFEHTILIT+DGAEILT+C
Sbjct:   307 TIGSRNPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILTKC 350
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008235 "metalloexopeptidase activity" evidence=IEA;ISS
GO:0009987 "cellular process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA;TAS
GO:0031365 "N-terminal protein amino acid modification" evidence=TAS
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
GO:0019408 "dolichol biosynthetic process" evidence=RCA
TAIR|locus:2205329 MAP1C "methionine aminopeptidase 1B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085979 MAP1B "methionine aminopeptidase 1C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280127 map1d "methionine aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0032247 CG5188 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P0A5J2 map "Methionine aminopeptidase 2" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
WB|WBGene00003129 map-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279433 metap1 "methionine aminopeptidase 1" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLA4 METAP1 "Methionine aminopeptidase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PSB4 METAP1 "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4VBS4AMP1D_DANRE3, ., 4, ., 1, 1, ., 1, 80.48970.83280.8698yesno
P0A5J2AMPM2_MYCTU3, ., 4, ., 1, 1, ., 1, 80.53540.78750.9754yesno
P0A5J3AMPM_MYCBO3, ., 4, ., 1, 1, ., 1, 80.53540.78750.9754yesno
Q54VU7AMP1D_DICDI3, ., 4, ., 1, 1, ., 1, 80.53520.78470.6856yesno
Q9FV50AMP1D_ARATH3, ., 4, ., 1, 1, ., 1, 80.77970.97730.9857yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.979
3rd Layer3.4.110.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_V000509
hypothetical protein; Removes the amino-terminal methionine from nascent proteins (By similarity) (350 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.IV.3048.1
SubName- Full=Putative uncharacterized protein; (227 aa)
•  •  • 0.848
eugene3.00141000
hypothetical protein (227 aa)
•  •  • 0.806
gw1.VI.8.1
SecY protein (430 aa)
•     • 0.804
rps8
RecName- Full=30S ribosomal protein S8, chloroplastic;; One of the primary rRNA binding protein [...] (134 aa)
•  •  • 0.793
gw1.16155.2.1
Predicted protein (206 aa)
•  •  • 0.792
gw1.XVIII.2978.1
SecY protein (478 aa)
•     • 0.739
gw1.II.2942.1
SubName- Full=Putative uncharacterized protein; (218 aa)
•  •  • 0.734
estExt_Genewise1_v1.C_LG_X3691
SubName- Full=Putative uncharacterized protein; (165 aa)
•  •  • 0.722
estExt_fgenesh4_pg.C_13160002
hypothetical protein (165 aa)
•  •  • 0.711
gw1.VI.1738.1
hypothetical protein (72 aa)
•  •  • 0.709

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query353
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 1e-136
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 1e-131
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 1e-114
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 1e-113
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 1e-110
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 1e-102
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 2e-77
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 9e-59
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 7e-54
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 6e-42
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 9e-40
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 1e-33
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 4e-33
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 2e-29
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 7e-28
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 6e-27
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 4e-11
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 5e-11
cd01087243 cd01087, Prolidase, Prolidase 4e-09
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 4e-07
TIGR00495 389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 2e-06
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 2e-05
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 9e-05
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 0.001
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 0.001
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 0.003
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information 
 Score =  386 bits (994), Expect = e-136
 Identities = 127/238 (53%), Positives = 169/238 (71%), Gaps = 1/238 (0%)

Query: 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT 175
           IE MR +GR+ A+VL+     +KPG+TT E+D+  H+ I ++GAYP+PLGY GFPKS+CT
Sbjct: 1   IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60

Query: 176 SVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDC 235
           SVNE +CHGIPD R L+DGD +NIDV V L+GYHGD++ TF  G+V +EA+ LV+VT++ 
Sbjct: 61  SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120

Query: 236 LHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHG 295
           L+K I    PG     IG  I+ +A++  Y VVR+F GHGIGR FH +P + +Y     G
Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPNYGRPGTG 180

Query: 296 -RMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 352
            ++     FTIEPM+ +G+   V   D WT+VT+DGSLSAQFEHT+LIT DG EILT 
Sbjct: 181 PKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 238
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 353
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK09795361 aminopeptidase; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
PRK15173323 peptidase; Provisional 100.0
PRK14575406 putative peptidase; Provisional 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
KOG2737492 consensus Putative metallopeptidase [General funct 100.0
KOG1189 960 consensus Global transcriptional regulator, cell d 99.9
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.9
KOG2775397 consensus Metallopeptidase [General function predi 99.88
KOG2776398 consensus Metallopeptidase [General function predi 99.81
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.68
cd01086 238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 97.47
cd01066207 APP_MetAP A family including aminopeptidase P, ami 97.44
PLN03158 396 methionine aminopeptidase; Provisional 97.41
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 97.16
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 97.11
PRK05716252 methionine aminopeptidase; Validated 97.03
PRK12896 255 methionine aminopeptidase; Reviewed 96.93
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 96.87
PRK15173323 peptidase; Provisional 96.78
PRK12897248 methionine aminopeptidase; Reviewed 96.66
PRK14575406 putative peptidase; Provisional 96.63
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.61
PRK14576405 putative endopeptidase; Provisional 96.59
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.51
PRK12318291 methionine aminopeptidase; Provisional 96.5
COG0024 255 Map Methionine aminopeptidase [Translation, riboso 96.47
PRK08671291 methionine aminopeptidase; Provisional 96.39
PRK09795361 aminopeptidase; Provisional 96.37
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.34
PRK07281286 methionine aminopeptidase; Reviewed 96.28
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 96.27
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.12
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 96.02
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 95.95
TIGR00501 295 met_pdase_II methionine aminopeptidase, type II. M 95.89
KOG2738 369 consensus Putative methionine aminopeptidase [Post 95.86
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 94.85
PTZ00053 470 methionine aminopeptidase 2; Provisional 94.37
PRK10879438 proline aminopeptidase P II; Provisional 93.87
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 90.92
PRK13607443 proline dipeptidase; Provisional 89.47
KOG2776 398 consensus Metallopeptidase [General function predi 87.21
KOG2775 397 consensus Metallopeptidase [General function predi 81.33
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.1e-88  Score=617.60  Aligned_cols=286  Identities=62%  Similarity=1.041  Sum_probs=275.5

Q ss_pred             CCCCCCCCCcccCCCCCCCCCCCCCCCcccCCC----CCCCCC-CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018617           68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQK----PIGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT  142 (353)
Q Consensus        68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~----~~~~~~-~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvT  142 (353)
                      .|.++++|||+++||+++||+||++|+|+..+.    .+.... ...|+++++|+.||+||+|+++++++|..+++||+|
T Consensus        69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT  148 (369)
T KOG2738|consen   69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT  148 (369)
T ss_pred             cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence            478999999999999999999999999998853    334433 568999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCC
Q 018617          143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD  222 (353)
Q Consensus       143 e~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~  222 (353)
                      ++|||+++|++++++|+|||||||++||+++|+|+|+++|||+|+.|+||+||||+||++++++|||+|+++||+||+++
T Consensus       149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd  228 (369)
T KOG2738|consen  149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD  228 (369)
T ss_pred             HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCCC-CCceecCCc
Q 018617          223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQ  301 (353)
Q Consensus       223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~-~~~~L~~Gm  301 (353)
                      ++.++|++++++|++.||+.||||+++++|++.|++++.++||++++.|+|||||..||..|.|.||.++ ..++|++||
T Consensus       229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~  308 (369)
T KOG2738|consen  229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQ  308 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999875 678999999


Q ss_pred             EEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCCC
Q 018617          302 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC  353 (353)
Q Consensus       302 vftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~~  353 (353)
                      +|||||||+.|..+..+|+|+||++|+||+.+||||||+|||++|+||||++
T Consensus       309 tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~r  360 (369)
T KOG2738|consen  309 TFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTKR  360 (369)
T ss_pred             eEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhcc
Confidence            9999999999999999999999999999999999999999999999999974

>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query353
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 2e-80
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 3e-80
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 3e-80
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 2e-79
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 7e-76
4fli_A326 Human Metap1 With Bengamide Analog Y16, In Mn Form 2e-75
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 3e-75
4fuk_A337 Aminopeptidase From Trypanosoma Brucei Length = 337 6e-73
3s6b_A368 Crystal Structure Of Methionine Aminopeptidase 1b F 2e-72
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 1e-63
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 2e-63
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 1e-57
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 1e-57
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 1e-57
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 1e-57
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 1e-57
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 1e-57
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 2e-57
4mat_A278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 4e-57
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 4e-57
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 5e-57
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 5e-57
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 4e-44
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 3e-43
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 8e-40
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 2e-36
2dfi_A301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 1e-21
1xgs_A295 Methionine Aminopeptidase From Hyperthermophile Pyr 1e-21
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 4e-12
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 4e-12
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 1e-11
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 2e-10
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 2e-08
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 2e-07
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 2e-06
1b59_A370 Complex Of Human Methionine Aminopeptidase-2 Comple 2e-06
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 3e-06
1r58_A369 Crystal Structure Of Metap2 Complexed With A357300 3e-06
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 3e-06
1b6a_A478 Human Methionine Aminopeptidase 2 Complexed With Tn 3e-06
1qzy_A478 Human Methionine Aminopeptidase In Complex With Ben 3e-06
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 6e-06
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 6e-06
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 6e-06
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 7e-06
2v6c_A353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 8e-06
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 3e-05
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 5e-05
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 5e-05
2q8k_A 401 The Crystal Structure Of Ebp1 Length = 401 5e-05
3j2i_A 394 Structure Of Late Pre-60s Ribosomal Subunits With N 5e-05
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 7e-05
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure 
Iteration: 1

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/282 (53%), Positives = 188/282 (66%), Gaps = 4/282 (1%)
Query: 72  RKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIV-SGPEVHDEKGIECMRVSGRLAAQVL 130
           R  L PG +SP RPVP+ I RP YV   KP     S P V   + IE MRV+GR+AA  L
Sbjct: 7   RTALSPGVLSPTRPVPNWIARPEYVG--KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGAL 64
Query: 131 EYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRA 190
             AG  V PG+TTDE+D+  H+ ++DNGAYPS LGY GFPKS CTS+NE ICHGIPDS  
Sbjct: 65  AEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTV 124
Query: 191 LEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYK 250
           + DGD +NIDVT Y+ G HGDT+ATF  GDV DE R LV  T++   +AI+   PG    
Sbjct: 125 ITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALS 184
Query: 251 KIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPML 309
            IG+ I+ +A+R+ Y VVR F GHGIG  FH   VVLHY +      M    TFTIEPM+
Sbjct: 185 VIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMI 244
Query: 310 TIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILT 351
            +G+++  +WDD WT+VT+D   +AQFEHT+L+T  G EILT
Sbjct: 245 NLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT 286
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1B59|A Chain A, Complex Of Human Methionine Aminopeptidase-2 Complexed With Ovalicin Length = 370 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|1R58|A Chain A, Crystal Structure Of Metap2 Complexed With A357300 Length = 369 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1B6A|A Chain A, Human Methionine Aminopeptidase 2 Complexed With Tnp-470 Length = 478 Back     alignment and structure
>pdb|1QZY|A Chain A, Human Methionine Aminopeptidase In Complex With Bengamide Inhibitor Laf153 And Cobalt Length = 478 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query353
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 1e-180
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-176
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 1e-173
3mx6_A262 Methionine aminopeptidase; seattle structural geno 1e-145
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-137
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 1e-133
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 1e-126
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-125
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 1e-119
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 6e-73
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 5e-06
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 5e-69
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 5e-05
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 2e-59
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 6e-05
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 2e-56
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 5e-32
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 7e-32
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 3e-28
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 4e-28
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 4e-28
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 9e-27
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 2e-26
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 3e-25
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 1e-21
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 6e-19
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 5e-09
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 5e-09
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 3e-08
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 7e-08
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
 Score =  499 bits (1287), Expect = e-180
 Identities = 149/282 (52%), Positives = 185/282 (65%), Gaps = 2/282 (0%)

Query: 72  RKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLE 131
           R  L PG +SP RPVP+ I RP YV         S P V   + IE MRV+GR+AA  L 
Sbjct: 4   RTALSPGVLSPTRPVPNWIARPEYVGKPAAQ-EGSEPWVQTPEVIEKMRVAGRIAAGALA 62

Query: 132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRAL 191
            AG  V PG+TTDE+D+  H+ ++DNGAYPS LGY GFPKS CTS+NE ICHGIPDS  +
Sbjct: 63  EAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVI 122

Query: 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKK 251
            DGD +NIDVT Y+ G HGDT+ATF  GDV DE R LV  T++   +AI+   PG     
Sbjct: 123 TDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSV 182

Query: 252 IGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHG-RMVLNQTFTIEPMLT 310
           IG+ I+ +A+R+ Y VVR F GHGIG  FH   VVLHY        M    TFTIEPM+ 
Sbjct: 183 IGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMIN 242

Query: 311 IGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 352
           +G+++  +WDD WT+VT+D   +AQFEHT+L+T  G EILT 
Sbjct: 243 LGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTC 284
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query353
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.92
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 97.07
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 96.53
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 96.37
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 96.2
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 96.18
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 96.15
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 96.11
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 96.09
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 96.0
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 95.9
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 95.81
4fuk_A 337 Methionine aminopeptidase; structural genomics con 95.77
3tb5_A 264 Methionine aminopeptidase; hydrolase, metalloprote 95.75
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 95.64
3tav_A 286 Methionine aminopeptidase; ssgcid, seattle structu 95.64
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 95.59
3mx6_A 262 Methionine aminopeptidase; seattle structural geno 95.59
2b3h_A 329 Methionine aminopeptidase 1; hydrolase, metallopro 95.49
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 95.47
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 95.22
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 95.17
3s6b_A 368 Methionine aminopeptidase; malaria, proteolysis, " 95.13
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 95.07
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 94.9
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 94.71
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 94.51
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 92.79
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 91.51
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 90.82
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 90.64
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 90.58
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 90.15
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 86.16
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
Probab=100.00  E-value=2.4e-71  Score=536.76  Aligned_cols=286  Identities=47%  Similarity=0.827  Sum_probs=267.5

Q ss_pred             CCCCCCCCCcccCCCCCCCCCCCCCCCcccCCCC----------------CCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Q 018617           68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----------------IGIVSGPEVHDEKGIECMRVSGRLAAQVLE  131 (353)
Q Consensus        68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~~----------------~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~  131 (353)
                      +|+|.+++||+.+||.+.||++|++|+|+.....                ......|+|||++||++||+||+|++++++
T Consensus         5 ~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~   84 (337)
T 4fuk_A            5 TFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLD   84 (337)
T ss_dssp             CCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHH
T ss_pred             CcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999865321                112245899999999999999999999999


Q ss_pred             HHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcEEec
Q 018617          132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGD  211 (353)
Q Consensus       132 ~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D  211 (353)
                      .+.+.++||+||.||++.+++.++++|+++++.+|.+||+++|+|.|+++||++|++++|++||+|++|+|+.|+||++|
T Consensus        85 ~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY~sD  164 (337)
T 4fuk_A           85 IATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGFHGD  164 (337)
T ss_dssp             HHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEE
T ss_pred             HHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCC
Q 018617          212 TSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN  291 (353)
Q Consensus       212 ~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~  291 (353)
                      ++|||.+|++++++++++++++++++++++++|||++++||++++++++++.||..+++++|||||+.+|+.|.+.++.+
T Consensus       165 ~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p~~~~~~~  244 (337)
T 4fuk_A          165 LNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCHYAN  244 (337)
T ss_dssp             EEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEEEECCSCC
T ss_pred             eeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             -CCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCCC
Q 018617          292 -NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC  353 (353)
Q Consensus       292 -~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~~  353 (353)
                       +...+|++||||||||++|.++.....|+|+||++|+||++++|||||||||++|+|+||.+
T Consensus       245 ~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~EvLT~~  307 (337)
T 4fuk_A          245 NKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTDW  307 (337)
T ss_dssp             ---CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSCC
T ss_pred             CCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcCEECCCC
Confidence             45568999999999999999999999999999999999999999999999999999999963
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 353
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 2e-68
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 4e-56
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-52
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 5e-44
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 2e-39
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 5e-36
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 8e-33
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 3e-30
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score =  213 bits (543), Expect = 2e-68
 Identities = 112/246 (45%), Positives = 159/246 (64%), Gaps = 3/246 (1%)

Query: 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII-DNGAYPSPLGYG 167
            +   + IE MRV+GRLAA+VLE     VKPG++T E+D+  +  I+ +  A  + LGY 
Sbjct: 2   SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYH 61

Query: 168 GFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEAR 226
           G+PKSVC S+NE +CHGIP D++ L+DGD +NIDVTV  +G+HGDTS  F  G       
Sbjct: 62  GYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGE 121

Query: 227 NLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVV 286
            L ++T++ L+ A+ +  PG+  ++IG  IQ   +   + VVR++ GHGIGR FH +P V
Sbjct: 122 RLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQV 181

Query: 287 LHYRNNDHGRMVL-NQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRD 345
           LHY + +   ++    TFTIEPM+  G        D WT+ T+D SLSAQ+EHTI++T +
Sbjct: 182 LHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDN 241

Query: 346 GAEILT 351
           G EILT
Sbjct: 242 GCEILT 247
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query353
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 96.89
d1xgsa2 218 Methionine aminopeptidase {Archaeon Pyrococcus fur 96.55
d2gg2a1 262 Methionine aminopeptidase {Escherichia coli [TaxId 95.96
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 95.96
d1b6aa2 295 Methionine aminopeptidase {Human (Homo sapiens) [T 95.88
d2v3za2 264 Aminopeptidase P, C-terminal domain {Escherichia c 95.6
d1qxya_ 249 Methionine aminopeptidase {Staphylococcus aureus [ 94.67
d1o0xa_ 249 Methionine aminopeptidase {Thermotoga maritima [Ta 94.51
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.9e-55  Score=401.14  Aligned_cols=246  Identities=35%  Similarity=0.647  Sum_probs=232.3

Q ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCC
Q 018617          107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP  186 (353)
Q Consensus       107 ~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p  186 (353)
                      +|.||||+||++||+|+++++++++++.+.++||+|+.||++.+++.+.+.|+.+.+.++.+++.+++.+.++..+|+.+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP   80 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence            58899999999999999999999999999999999999999999999999999988888888888889999999888865


Q ss_pred             -CCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC
Q 018617          187 -DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY  265 (353)
Q Consensus       187 -~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~  265 (353)
                       +++++++||+|.+|+++.++||++|++||+++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus        81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~  160 (249)
T d1o0xa_          81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF  160 (249)
T ss_dssp             CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence             6788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccceeeeccCCccccCccccccC-CCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617          266 GVVRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR  344 (353)
Q Consensus       266 ~~~~~~~GHgIG~~~he~P~i~~~~-~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~  344 (353)
                      ..+.+++|||||+.+|+.|.+..+. .+.+.+|++||||+|||++|.++.....++|+|++++.||.+++|+||||+||+
T Consensus       161 ~~~~~~~GHgiG~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~~~~~~~~e~~~~~~~~~g~~g~r~Ed~v~VTe  240 (249)
T d1o0xa_         161 NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITE  240 (249)
T ss_dssp             EECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEECS
T ss_pred             eeecCCcccccccCCCcCCccceeccCCCCccccCCeEEEecceeecCCCceEEccCCcEEEeeCCcceEEeceEEEEcC
Confidence            8888999999999999988775432 346689999999999999999999999999999999999999999999999999


Q ss_pred             CCeEeCCC
Q 018617          345 DGAEILTQ  352 (353)
Q Consensus       345 ~G~eiLT~  352 (353)
                      +|+|+||+
T Consensus       241 ~G~e~LTk  248 (249)
T d1o0xa_         241 NGAEILTK  248 (249)
T ss_dssp             SSEEESSC
T ss_pred             CcCeeCCC
Confidence            99999996
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure