Citrus Sinensis ID: 018648
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| 356558019 | 456 | PREDICTED: oxysterol-binding protein-rel | 1.0 | 0.771 | 0.815 | 1e-179 | |
| 356542429 | 450 | PREDICTED: oxysterol-binding protein-rel | 1.0 | 0.782 | 0.806 | 1e-176 | |
| 359806174 | 450 | uncharacterized protein LOC100808070 [Gl | 1.0 | 0.782 | 0.803 | 1e-176 | |
| 225434911 | 456 | PREDICTED: oxysterol-binding protein-rel | 1.0 | 0.771 | 0.803 | 1e-174 | |
| 255583115 | 456 | oxysterol binding protein, putative [Ric | 1.0 | 0.771 | 0.798 | 1e-174 | |
| 297829460 | 456 | oxysterol-binding family protein [Arabid | 0.982 | 0.758 | 0.804 | 1e-173 | |
| 297793497 | 457 | oxysterol-binding family protein [Arabid | 1.0 | 0.770 | 0.790 | 1e-173 | |
| 15232633 | 458 | OSBP(oxysterol binding protein)-related | 0.982 | 0.755 | 0.798 | 1e-173 | |
| 359482105 | 499 | PREDICTED: oxysterol-binding protein-rel | 0.980 | 0.691 | 0.794 | 1e-173 | |
| 343172148 | 455 | oxysterol-binding protein, partial [Sile | 0.994 | 0.769 | 0.788 | 1e-173 |
| >gi|356558019|ref|XP_003547306.1| PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 287/352 (81%), Positives = 327/352 (92%)
Query: 1 MEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFI 60
MEYS+LLD ADECEDPYMRLVYASSWA+S+YFAY+R WKPFNP+LGET+EM NHGG+TF+
Sbjct: 105 MEYSYLLDQADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFL 164
Query: 61 AEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVP 120
AEQVSHHPPMSAGHAENEHF YDVTSKL+TKFLGNS+DVYPVGRTRVTLKRDGVV+DLVP
Sbjct: 165 AEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVIDLVP 224
Query: 121 PPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQP 180
PPTKV+NLIFGRTWIDSPG+M+MTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVY++AE+P
Sbjct: 225 PPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEP 284
Query: 181 KILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAP 240
KILMTGKWNESMSYQPCDSEGEPLPGTELKEVW VAD P++DK+QYTYF HK+NSFDTAP
Sbjct: 285 KILMTGKWNESMSYQPCDSEGEPLPGTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAP 344
Query: 241 KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDE 300
KKLL SDSRLRPDRYALE GDLSK+G+EKS LE++QR EK+IREAK+ FTP+WFDL++E
Sbjct: 345 KKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEDKQRTEKKIREAKEHKFTPRWFDLTEE 404
Query: 301 VTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE 352
VT TPWGDLE+Y+YNGKY+E RA +DNS S+ ++ + EFNPWQY + + E
Sbjct: 405 VTSTPWGDLEIYQYNGKYTEHRAAIDNSGSIDHVDNKEIEFNPWQYGNLSTE 456
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542429|ref|XP_003539669.1| PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359806174|ref|NP_001240944.1| uncharacterized protein LOC100808070 [Glycine max] gi|255641929|gb|ACU21233.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225434911|ref|XP_002283434.1| PREDICTED: oxysterol-binding protein-related protein 3C [Vitis vinifera] gi|297746058|emb|CBI16114.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255583115|ref|XP_002532324.1| oxysterol binding protein, putative [Ricinus communis] gi|223527967|gb|EEF30051.1| oxysterol binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297829460|ref|XP_002882612.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297328452|gb|EFH58871.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|297793497|ref|XP_002864633.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297310468|gb|EFH40892.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15232633|ref|NP_187541.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana] gi|75266215|sp|Q9SR33.1|ORP3B_ARATH RecName: Full=Oxysterol-binding protein-related protein 3B; AltName: Full=OSBP-related protein 3B gi|6478922|gb|AAF14027.1|AC011436_11 putative oxysterol-binding protein [Arabidopsis thaliana] gi|17065254|gb|AAL32781.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|20260050|gb|AAM13372.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|332641227|gb|AEE74748.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|359482105|ref|XP_002267148.2| PREDICTED: oxysterol-binding protein-related protein 3A [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|343172148|gb|AEL98778.1| oxysterol-binding protein, partial [Silene latifolia] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| TAIR|locus:2148368 | 457 | ORP3C "OSBP(oxysterol binding | 1.0 | 0.770 | 0.784 | 3.9e-163 | |
| TAIR|locus:2083594 | 458 | ORP3B "OSBP(oxysterol binding | 0.982 | 0.755 | 0.798 | 8.1e-163 | |
| TAIR|locus:2185163 | 453 | UNE18 "UNFERTILIZED EMBRYO SAC | 0.991 | 0.770 | 0.789 | 2.5e-161 | |
| UNIPROTKB|F1SBB0 | 743 | OSBPL1A "Oxysterol-binding pro | 0.556 | 0.263 | 0.384 | 4.6e-51 | |
| ZFIN|ZDB-GENE-091116-46 | 467 | osbpl2a "oxysterol binding pro | 0.599 | 0.451 | 0.363 | 8.7e-51 | |
| UNIPROTKB|Q9BXW6 | 950 | OSBPL1A "Oxysterol-binding pro | 0.556 | 0.206 | 0.388 | 3.2e-50 | |
| UNIPROTKB|E2RMD4 | 950 | OSBPL1A "Oxysterol-binding pro | 0.556 | 0.206 | 0.388 | 4.1e-50 | |
| UNIPROTKB|E1BLV1 | 952 | OSBPL1A "Oxysterol-binding pro | 0.556 | 0.205 | 0.389 | 8.7e-50 | |
| MGI|MGI:1927551 | 950 | Osbpl1a "oxysterol binding pro | 0.556 | 0.206 | 0.388 | 1.4e-49 | |
| UNIPROTKB|E1BL67 | 480 | OSBPL2 "Oxysterol-binding prot | 0.622 | 0.456 | 0.342 | 3.3e-49 |
| TAIR|locus:2148368 ORP3C "OSBP(oxysterol binding protein)-related protein 3C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1588 (564.1 bits), Expect = 3.9e-163, P = 3.9e-163
Identities = 277/353 (78%), Positives = 321/353 (90%)
Query: 1 MEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFI 60
MEYSHLLD ADECEDPY+RLVYASSWA+S+Y+A++R WKPFNP+LGET+EMVNHGG++FI
Sbjct: 105 MEYSHLLDQADECEDPYLRLVYASSWAISVYYAFQRTWKPFNPILGETYEMVNHGGISFI 164
Query: 61 AEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVP 120
+EQVSHHPPMSAGHAENEHFIYD+TSKL+TK LGNS+DVYPVGRTRVTLK+DGVVLDLVP
Sbjct: 165 SEQVSHHPPMSAGHAENEHFIYDITSKLKTKLLGNSVDVYPVGRTRVTLKKDGVVLDLVP 224
Query: 121 PPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQP 180
P TK+HNLIFGRTW+DSPG+MVMTNLTTGDKVVLYFQPCGWFG+GRYEVDGYVY AAE+P
Sbjct: 225 PLTKIHNLIFGRTWVDSPGEMVMTNLTTGDKVVLYFQPCGWFGSGRYEVDGYVYSAAEEP 284
Query: 181 KILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAP 240
KI+MTGKWNE MSYQPCD+EGEPLPGTELKEVW +AD P++D +QYT+F HK+NSFDTAP
Sbjct: 285 KIMMTGKWNEKMSYQPCDAEGEPLPGTELKEVWHLADVPKNDNFQYTHFAHKINSFDTAP 344
Query: 241 KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDE 300
KLL SDSR+RPDRY+LE+GDLSKAGSEK LEERQRAEKR RE K FTP+WFDL+DE
Sbjct: 345 AKLLASDSRIRPDRYSLEQGDLSKAGSEKHSLEERQRAEKRTRETKGQKFTPRWFDLTDE 404
Query: 301 VTPTPWGDLEVYRYNGKYSELRATLDNSESLG-EINPETTEFNPWQYEDSAAE 352
+TPTPWGD+EVY+YNGKY+E R T ++S S E + ++ EFNPWQY + + E
Sbjct: 405 ITPTPWGDIEVYQYNGKYNEHRDTAESSSSASNETDLKSIEFNPWQYGNISTE 457
|
|
| TAIR|locus:2083594 ORP3B "OSBP(oxysterol binding protein)-related protein 3B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2185163 UNE18 "UNFERTILIZED EMBRYO SAC 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SBB0 OSBPL1A "Oxysterol-binding protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-091116-46 osbpl2a "oxysterol binding protein-like 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BXW6 OSBPL1A "Oxysterol-binding protein-related protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RMD4 OSBPL1A "Oxysterol-binding protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BLV1 OSBPL1A "Oxysterol-binding protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1927551 Osbpl1a "oxysterol binding protein-like 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BL67 OSBPL2 "Oxysterol-binding protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00024298001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (373 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 352 | |||
| pfam01237 | 335 | pfam01237, Oxysterol_BP, Oxysterol-binding protein | 1e-131 |
| >gnl|CDD|216381 pfam01237, Oxysterol_BP, Oxysterol-binding protein | Back alignment and domain information |
|---|
Score = 377 bits (970), Expect = e-131
Identities = 134/326 (41%), Positives = 191/326 (58%), Gaps = 15/326 (4%)
Query: 1 MEYSHLLDLADECEDPYMRLVYASSWALSIYFA--YRRAWKPFNPVLGETFEMVNH-GGV 57
+EY LLD A + +DP R++Y +++A+S Y + RR KPFNP+LGETFE+V GG
Sbjct: 18 LEYPDLLDKAAKEDDPLERMLYVAAFAVSTYSSTRKRRTKKPFNPLLGETFELVREDGGF 77
Query: 58 TFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLD 117
FI+EQVSHHPP+SA HAE++ + +S ++KF G SI+V P G +TLK+ G
Sbjct: 78 RFISEQVSHHPPISAYHAESKGWTLWGSSAPKSKFWGKSIEVKPEGHAHLTLKKTGEHYT 137
Query: 118 LVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAA 177
P T +HN+IFG+ +++ G+M + N TTG K V+ F+ GWF + EV+G VYD
Sbjct: 138 WTKPTTHIHNIIFGKPYVELYGEMYIKNSTTGYKAVIEFKKKGWFSGRKNEVEGKVYDKK 197
Query: 178 EQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPED--DKYQYTYFTHKLNS 235
+ ++GKWNES+ + S E K +W+ P + Y +T F LN
Sbjct: 198 GKVLYTISGKWNESLYIKKVKSS-----TGEKKLLWKANPLPPNSEKVYGFTKFAIPLNE 252
Query: 236 FDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKW 294
K +L P+DSRLRPD+ ALE+GD +A EK RLEE+QR ++ RE K + + P+W
Sbjct: 253 LTPELKEELPPTDSRLRPDQRALEEGDYDEAEEEKLRLEEKQRERRKEREEKGEEWKPRW 312
Query: 295 FDLSDEVTPTPWGDLEVYRYNGKYSE 320
F + P E + Y G Y E
Sbjct: 313 FVKVKD----PLTGEEDWVYKGGYWE 334
|
Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| KOG2209 | 445 | consensus Oxysterol-binding protein [Signal transd | 100.0 | |
| PF01237 | 354 | Oxysterol_BP: Oxysterol-binding protein ; InterPro | 100.0 | |
| KOG1737 | 799 | consensus Oxysterol-binding protein [Lipid transpo | 100.0 | |
| KOG2210 | 392 | consensus Oxysterol-binding protein [Signal transd | 100.0 |
| >KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-94 Score=667.55 Aligned_cols=323 Identities=36% Similarity=0.657 Sum_probs=293.3
Q ss_pred CCccHHHhhhcCCCCHHHHHHHHHHHHhhhhcc-cccCCCCCCcCCCceEEEEecC-CeEEEeeccccCCCeeEEEEE--
Q 018648 1 MEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE-- 76 (352)
Q Consensus 1 leY~~lL~~Aa~~~dp~eRm~~V~af~iS~~~~-~~r~~KPfNPiLGETfe~~~~~-g~~~iaEQVSHHPPIsA~~~e-- 76 (352)
|||..||.+||+++||+|||.+|+|||+|+.++ -.|+.||||||||||||+.+.+ |+|||||||||||||||||+|
T Consensus 79 me~~yLi~kAs~~~~p~eRmqyVAAFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl 158 (445)
T KOG2209|consen 79 MEHTYLIHKASSQSDPVERMQYVAAFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGL 158 (445)
T ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhccc
Confidence 799999999999999999999999999999975 5699999999999999999854 999999999999999999999
Q ss_pred cCCeEEEEEeeeEEEEEeeEEEEEEeeEEEEEEecCCeEEEEecCCceeeeeecCceeEecCCcEEEEeCCCCCEEEEEE
Q 018648 77 NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYF 156 (352)
Q Consensus 77 ~~~~~~~~~~~~~~kF~G~sv~~~~~G~~~i~~~~~ge~y~~~~p~~~v~nii~G~~~~e~~G~~~i~~~~tg~~a~i~F 156 (352)
|..|.|.|++.|+.||||+||++.|.|.++|+|.++||.|+|+.|+++|||||+|++|||++|.|.|.|+.||++|+++|
T Consensus 159 ~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~F 238 (445)
T KOG2209|consen 159 NNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNF 238 (445)
T ss_pred CcceEEeeeecccceeccceeecCCCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEec
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCccccCceeEEEEEEECCCCCceEEEeeEeeceeeeeeCC------------------------C---CCCc------
Q 018648 157 QPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCD------------------------S---EGEP------ 203 (352)
Q Consensus 157 ~~~~~~g~~~~~v~G~I~~~~g~~~~~i~G~W~~~i~~~~~~------------------------~---~g~~------ 203 (352)
+++|+||+..|+|+|.|.|++.++++.|.|+|++-|...+.. + +.-+
T Consensus 239 k~~G~~gk~lHkVEG~i~d~~k~kl~~lYGkWTe~l~~cd~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~ 318 (445)
T KOG2209|consen 239 KPCGLFGKELHKVEGHIQDKSKKKLCALYGKWTECLYSCDPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSES 318 (445)
T ss_pred ccccccccchhheeehhhccccccchhhhccHHHHHhcCCHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcce
Confidence 999999999999999999999899999999999877643210 0 0012
Q ss_pred ---CCCCceeEeEeeccCCCC--CccccceeeeecCCCCC-CCCcCCCCCcccchhHHHHHcCChhHHHHHHHHHHHHHH
Q 018648 204 ---LPGTELKEVWRVADAPED--DKYQYTYFTHKLNSFDT-APKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQR 277 (352)
Q Consensus 204 ---~~~~~~~~lW~~~~~p~~--~~~~ft~fa~~Lne~~~-~~~~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR 277 (352)
+|++ +.||.+++.|++ ++|+||.||+.||+++. ....++|||||+|||+|+||+|++|+|.++|+||||+||
T Consensus 319 v~~iPgS--k~LW~~n~rP~n~~~~y~FT~FalsLNem~~~M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQR 396 (445)
T KOG2209|consen 319 VFIIPGS--KLLWRINPRPPNSAQMYNFTSFALSLNEMDKGMESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQR 396 (445)
T ss_pred eEecCCC--eEEEEecCCCCCHHHhhchhhheeehhhhccCcccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHH
Confidence 2333 459999999998 59999999999999998 444678999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCcchhhcccCCCCCCcCC
Q 018648 278 AEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGE 333 (352)
Q Consensus 278 ~~rk~r~~~~~~~~Pr~F~~~~~~~~~~~~~~~~~~y~g~Yw~~r~~~~~~~~~~~ 333 (352)
++||.|.+....|+||||.+..++.+ +...|.|.|+||++ ++++|.++
T Consensus 397 e~Rk~rs~~~~dw~~rWF~~~~np~t----~~~dWlYsGgYwdR----~ysn~~~i 444 (445)
T KOG2209|consen 397 EARKNRSKSEEDWKTRWFHQGPNPYT----GAQDWLYSGGYWDR----NYSNCPDI 444 (445)
T ss_pred HHHhhcccccccCcchhcccCCCCCC----CcccceeecCcccc----ccccCccc
Confidence 99999988888999999999988743 34579999999964 68888665
|
|
| >PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related | Back alignment and domain information |
|---|
| >KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 352 | ||||
| 1zht_A | 438 | Structure Of Yeast Oxysterol Binding Protein Osh4 I | 3e-10 | ||
| 3spw_A | 436 | Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDY | 3e-10 | ||
| 1zi7_A | 406 | Structure Of Truncated Yeast Oxysterol Binding Prot | 2e-07 |
| >pdb|1ZHT|A Chain A, Structure Of Yeast Oxysterol Binding Protein Osh4 In Complex With 7-Hydroxycholesterol Length = 438 | Back alignment and structure |
|
| >pdb|3SPW|A Chain A, Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4- Phosphate Length = 436 | Back alignment and structure |
| >pdb|1ZI7|A Chain A, Structure Of Truncated Yeast Oxysterol Binding Protein Osh4 Length = 406 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 352 | |||
| 1zhx_A | 438 | KES1 protein; oxysterol,sterol binding protein, li | 2e-89 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A Length = 438 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 2e-89
Identities = 71/375 (18%), Positives = 127/375 (33%), Gaps = 58/375 (15%)
Query: 1 MEYSHLLDLADECED----------------PYMRLVYASSWALSIY--------FAYRR 36
E+ L D R++ + W +S +
Sbjct: 51 AEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGS 110
Query: 37 AWKPFNPVLGETFEMV-------NHGGVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSK 87
KP NP LGE F G ++EQVSHHPP++A N+ ++
Sbjct: 111 EKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQ 170
Query: 88 LRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLT 147
++ F S+ + L + PPP + ++ +++ G + + +
Sbjct: 171 IKASFTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-S 228
Query: 148 TGDKVVLYFQPCGWFGAGRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEG 201
TG V+ F G+F + +Y + E+ ++G+W+ S + +
Sbjct: 229 TGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKE 288
Query: 202 EPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGD 261
E + + A P LN + L S A++ GD
Sbjct: 289 ES------RLFYDAARIP----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGD 332
Query: 262 LSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSEL 321
+ K+ LEE QR ++ EAK + +WF D + TP V + + +L
Sbjct: 333 FNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY-SVTPEEGALVPEKDDTFLKL 391
Query: 322 RATLDNSESLGEINP 336
+ L+ S
Sbjct: 392 ASALNLSTKNAPSGT 406
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| 1zhx_A | 438 | KES1 protein; oxysterol,sterol binding protein, li | 100.0 |
| >1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-80 Score=618.39 Aligned_cols=279 Identities=24% Similarity=0.409 Sum_probs=249.7
Q ss_pred CCccHHHhhhcCCC----------C------HHHHHHHHHHHHhhhhcc-c-------ccCCCCCCcCCCceEEEEecC-
Q 018648 1 MEYSHLLDLADECE----------D------PYMRLVYASSWALSIYFA-Y-------RRAWKPFNPVLGETFEMVNHG- 55 (352)
Q Consensus 1 leY~~lL~~Aa~~~----------d------p~eRm~~V~af~iS~~~~-~-------~r~~KPfNPiLGETfe~~~~~- 55 (352)
|||++||++||..+ | |++||++|++|+||+|+. + .+++|||||||||||+|.+++
T Consensus 51 ~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~ 130 (438)
T 1zhx_A 51 AEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENK 130 (438)
T ss_dssp CSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCT
T ss_pred hhhHHHHhhhhhcccccccccccCCccccCCHHHHHHHHHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCc
Confidence 68999999998876 9 999999999999999863 2 578999999999999999854
Q ss_pred -----C-eEEEeeccccCCCeeEEEEEcC--CeEEEEEeeeEEEEEee-EEEEEEeeEEEEEEecCCeEEEEecCCceee
Q 018648 56 -----G-VTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTKFLGN-SIDVYPVGRTRVTLKRDGVVLDLVPPPTKVH 126 (352)
Q Consensus 56 -----g-~~~iaEQVSHHPPIsA~~~e~~--~~~~~~~~~~~~kF~G~-sv~~~~~G~~~i~~~~~ge~y~~~~p~~~v~ 126 (352)
| ++|||||||||||||||||+|+ +|.++|+..+++||+|+ ||+|.+.|.++|+|. ||+|+|++|+++|+
T Consensus 131 ~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~~~~kskF~G~~Sv~v~~~G~~~l~l~--~E~Y~~t~P~~~v~ 208 (438)
T 1zhx_A 131 EHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIK--DESYLVTPPPLHIE 208 (438)
T ss_dssp TCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEEEEEEEEECTTCCEEEEEECCEEEEET--TEEEEEECCCEEEE
T ss_pred cCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEEeeeEEEEcCceEEEEEcceEEEEEEC--CcEEEEecCcEEEE
Confidence 6 8999999999999999999997 59999999999999999 999999999999997 89999999999999
Q ss_pred eeecCceeEecCCcEEEEeCCCCCEEEEEEeeCccccCceeEEEEEEECC------CCCceEEEeeEeeceeeeeeCCCC
Q 018648 127 NLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDA------AEQPKILMTGKWNESMSYQPCDSE 200 (352)
Q Consensus 127 nii~G~~~~e~~G~~~i~~~~tg~~a~i~F~~~~~~g~~~~~v~G~I~~~------~g~~~~~i~G~W~~~i~~~~~~~~ 200 (352)
|||+|++|+|++|+|.|+| +||++|+|+|+++||||++.+.|+|.|++. +|+++++|+|+|++.|++....++
T Consensus 209 gIi~G~~~vE~~G~~~I~~-~tg~~~~l~F~~kg~f~g~~n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~ 287 (438)
T 1zhx_A 209 GILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK 287 (438)
T ss_dssp CTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSSCSSSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG
T ss_pred EEEecceeEecCCeEEEEc-CCCCEEEEEEcCCCCcCCCccEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC
Confidence 9999999999999999999 799999999999999999999999999985 567899999999999999765421
Q ss_pred CCcCCCCceeEeEeeccCCCCCccccceeeeecCCCCCCCCcCCCCCccc--chhHHHHHcCChhHHHHHHHHHHHHHHH
Q 018648 201 GEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRL--RPDRYALEKGDLSKAGSEKSRLEERQRA 278 (352)
Q Consensus 201 g~~~~~~~~~~lW~~~~~p~~~~~~ft~fa~~Lne~~~~~~~~~ptDSR~--RpD~rale~Gd~d~A~~eK~~LEe~QR~ 278 (352)
.....+|++++.+... + .+ .+ ...++|||||+ |||+|||++||+|.|+++|.+|||+||+
T Consensus 288 ------~~~~~~~~~~~~~~~~------~--~v---~p-~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~ 349 (438)
T 1zhx_A 288 ------EESRLFYDAARIPAEH------L--NV---KP-LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRE 349 (438)
T ss_dssp ------GGCEEEEETTTSCCCC------C--BC---CC-GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ------ccceEEeccCCCCCcc------c--cC---CC-hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 1135699998765421 1 11 11 13568999997 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCceecceeecCC
Q 018648 279 EKRIREAKDDMFTPKWFDLSDE 300 (352)
Q Consensus 279 ~rk~r~~~~~~~~Pr~F~~~~~ 300 (352)
+||+|+++|++|+||||+++++
T Consensus 350 ~rk~re~~g~~w~Pr~F~~~~~ 371 (438)
T 1zhx_A 350 LRKEEEAKGISWQRRWFKDFDY 371 (438)
T ss_dssp HHHHHHHHTCCCCCSSEEEEEC
T ss_pred HHHHHHHcCCCcccceEEECCc
Confidence 9999999999999999999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 352 | ||||
| d1zhxa1 | 433 | d.338.1.1 (A:2-434) Oxysterol-binding protein homo | 2e-72 |
| >d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 433 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Oxysterol-binding protein-like superfamily: Oxysterol-binding protein-like family: Oxysterol-binding protein domain: Oxysterol-binding protein homolog 4, KES1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 229 bits (584), Expect = 2e-72
Identities = 73/395 (18%), Positives = 126/395 (31%), Gaps = 63/395 (15%)
Query: 1 MEYSHLLDLADECED----------------PYMRLVYASSWALSIY--------FAYRR 36
E+ L D R++ + W +S +
Sbjct: 46 AEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGS 105
Query: 37 AWKPFNPVLGETFEMV-------NHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLR 89
KP NP LGE F G ++EQVSHHPP++A N+ + +
Sbjct: 106 EKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQ 165
Query: 90 TK-FLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTT 148
K S+ + L + PPP + ++ +++ G + + +T
Sbjct: 166 IKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-ST 224
Query: 149 GDKVVLYFQPCGWFGAGRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEGE 202
G V+ F G+F + +Y + E+ ++G+W+ S + + E
Sbjct: 225 GLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEE 284
Query: 203 PLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDL 262
+ + A P LN + L S A++ GD
Sbjct: 285 S------RLFYDAARIP----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 328
Query: 263 SKAGSEKSRLEERQRAEKRIREAKDDMFTPKWF-DLSDEVTP----TPWGDLEVY---RY 314
+ K+ LEE QR ++ EAK + +WF D VTP + +
Sbjct: 329 NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS 388
Query: 315 NGKYSELRATLDNSESLGEINPETTEFNPWQYEDS 349
S A E E W+++
Sbjct: 389 ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRE 423
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| d1zhxa1 | 433 | Oxysterol-binding protein homolog 4, KES1 {Baker's | 100.0 |
| >d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Oxysterol-binding protein-like superfamily: Oxysterol-binding protein-like family: Oxysterol-binding protein domain: Oxysterol-binding protein homolog 4, KES1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.2e-77 Score=590.31 Aligned_cols=326 Identities=21% Similarity=0.317 Sum_probs=263.7
Q ss_pred CCccHHHhhhcCCCC----------------HHHHHHHHHHHHhhhhcc--------cccCCCCCCcCCCceEEEEecC-
Q 018648 1 MEYSHLLDLADECED----------------PYMRLVYASSWALSIYFA--------YRRAWKPFNPVLGETFEMVNHG- 55 (352)
Q Consensus 1 leY~~lL~~Aa~~~d----------------p~eRm~~V~af~iS~~~~--------~~r~~KPfNPiLGETfe~~~~~- 55 (352)
|||++||++||.++| |++||++|++|+||+|+. ..+.+|||||||||||+|.+.+
T Consensus 46 ~ey~~Ll~~aa~~~d~~~~~~~~~~~~~e~~p~eRm~~V~~f~lS~~~~~~~~~~~~~~~~kKPfNPiLGETfe~~~~d~ 125 (433)
T d1zhxa1 46 AEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENK 125 (433)
T ss_dssp CSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCT
T ss_pred HhhHHHHHHHhhcccccccccccccccccCCHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCcccceEEEEEecC
Confidence 799999999998666 899999999999999863 3578999999999999999843
Q ss_pred ------CeEEEeeccccCCCeeEEEEEcC--CeEEEEEeeeEEEEEeeEEEEEEeeEEEEEEecCCeEEEEecCCceeee
Q 018648 56 ------GVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHN 127 (352)
Q Consensus 56 ------g~~~iaEQVSHHPPIsA~~~e~~--~~~~~~~~~~~~kF~G~sv~~~~~G~~~i~~~~~ge~y~~~~p~~~v~n 127 (352)
+++|+|||||||||||||||+++ +|.++|+..++++|. +|+++.+.|..++.|..++|+|+|++|+++|+|
T Consensus 126 ~~~~~~~~~~iaEQVSHHPPIsA~~~~~~~~~~~~~g~~~~~~~f~-~s~~i~~~g~~~~~l~~~~E~Y~~~~P~~~i~g 204 (433)
T d1zhxa1 126 EHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFT-KSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEG 204 (433)
T ss_dssp TCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEEEEEEEEEC-TTCCEEEEEECCEEEEETTEEEEEECCCEEEEC
T ss_pred CCCcCCcEEEEEeCCCCCCcceeEEEEcCCCCEEEEEEeeeeeeec-ceEEEEEcceEEEEEEecCcEEEEecCCEEEEE
Confidence 58999999999999999999987 499999999999995 467788888888888889999999999999999
Q ss_pred eecCceeEecCCcEEEEeCCCCCEEEEEEeeCccccCceeEEEEEEECCCC------CceEEEeeEeeceeeeeeCCCCC
Q 018648 128 LIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAE------QPKILMTGKWNESMSYQPCDSEG 201 (352)
Q Consensus 128 ii~G~~~~e~~G~~~i~~~~tg~~a~i~F~~~~~~g~~~~~v~G~I~~~~g------~~~~~i~G~W~~~i~~~~~~~~g 201 (352)
||+|++|+|+.|+|.|.| +||++|+|+|+++||||+..+.|+|.|++.++ +.+++|.|+|++.+.+......+
T Consensus 205 ii~G~~~vE~~G~~~I~~-~tg~~a~i~f~~kg~fsg~~~~v~g~I~~~~~~~~~~~~~l~~i~G~W~~~~~~~~~~~~~ 283 (433)
T d1zhxa1 205 ILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKE 283 (433)
T ss_dssp TTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSSCSSSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCGG
T ss_pred EEcCCceEEecceEEEEe-CCCCEEEEEEcCCCccCCCcceEEEEEEeCCCCCccccceeEEEecccCceEEEEeCCCCC
Confidence 999999999999999988 79999999999999999999999999998765 35799999999999987644221
Q ss_pred CcCCCCceeEeEeeccCCCCCccccceeeeecCCCCCCCC-cCCCCCcccchhHHHHHcCChhHHHHHHHHHHHHHHHHH
Q 018648 202 EPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEK 280 (352)
Q Consensus 202 ~~~~~~~~~~lW~~~~~p~~~~~~ft~fa~~Lne~~~~~~-~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR~~r 280 (352)
....+|++++.+. .+|++.+..+ ..+|||+|+|||++||++||+|.|+++|.+|||+||++|
T Consensus 284 ------~~~~~~d~~~~~~-----------~~~~~~p~e~~~p~eS~~~wr~d~~ale~Gd~d~A~~eK~~LEe~QR~~R 346 (433)
T d1zhxa1 284 ------ESRLFYDAARIPA-----------EHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELR 346 (433)
T ss_dssp ------GCEEEEETTTSCC-----------CCCBCCCGGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred ------cceEEEeCCcCCc-----------ccccCCCcccCCCCCCccccHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 2345777766543 3444443221 123556668999999999999999999999999999999
Q ss_pred HHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCcchhhcccCCCCCCcC--------CcC-CCCCCcCCCcc
Q 018648 281 RIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLG--------EIN-PETTEFNPWQY 346 (352)
Q Consensus 281 k~r~~~~~~~~Pr~F~~~~~~~~~~~~~~~~~~y~g~Yw~~r~~~~~~~~~~--------~~~-~~~~~~~~~~~ 346 (352)
|+|+++|++|+||||++++++.+.. .+...+.=.-.|.+-+...+|+-.+. ..| .++....+|.|
T Consensus 347 k~re~~g~~w~Pr~F~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~wr~ 420 (433)
T d1zhxa1 347 KEEEAKGISWQRRWFKDFDYSVTPE-EGALVPEKDDTFLKLASALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRF 420 (433)
T ss_dssp HHHHHHTCCCCCSSEEEEECSSSCC-TTSBCCCTTCHHHHHHHHHTBCCSSSSTTCBTTSGGGGCTTCCCEEEEE
T ss_pred HHHHHcCCCcCCCcEeccCCCCCcc-ccccCCccchHHHHHhhccCCccccCCCCccccchhhcccCCCCCccee
Confidence 9999999999999999998764311 11111222234777777777774432 111 23455777876
|