Citrus Sinensis ID: 018650

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
Protein Sequence
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccEEEHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEcccccccccEEHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEHcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHccccccccccccccccccccccccccccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIlheklpqlgilGCVMCIAGSIIIVihapqespitsVQEIWSLATQPAFLLYVASVIVLVFILIFHfaprcgntnaLVFIGICSLMGSLSVMSVKALGTSlkltfegknqllypdtWFFMLVVAICVIMQMNYLNKALDtfntavvsPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIllhttkdferspsfrggyssltpglspitptlstrlcsgngellkhdqdvpsedfcrqemy
Flexible Loop (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHttkdferspsfrGGYSSLTPGLSPITPTLSTRLCSGNGellkhdqdvpsedfcrqemy
Low Complexity Region (SEG)
MAFSKDNLKGFVLAllssffigssfiikkkglrraaaasgvragvggFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Disordered region (IsUnstruct)
*******LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF*****************************************************
Disordered Region (DISOPRED)
***SKDNLKGFVLALLSSFFIGSSFIIKKKGLR*************GFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES**TSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL***********************************************************
Disordered Region (DISEMBL)
MAFSKDNLKGFVLALLSSFFIGSSFIIKK**********GVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Disordered Region (DISPRO)
****KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF*******************ITPT*S****************************
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSEDFCRQEMY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	352	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.900	0.880	0.465	3e-76
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.900	0.880	0.462	3e-76
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.900	0.880	0.462	3e-76
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.900	0.883	0.453	9e-75
Q8BZF2	406	Magnesium transporter NIP	no	no	0.826	0.716	0.470	2e-74
Q0D2K0	466	Magnesium transporter NIP	no	no	0.832	0.628	0.474	2e-71
Q8BMW7	416	Magnesium transporter NIP	no	no	0.815	0.689	0.501	1e-67
Q5RDB8	410	Magnesium transporter NIP	no	no	0.826	0.709	0.505	6e-61
Q6NVV3	410	Magnesium transporter NIP	no	no	0.826	0.709	0.498	4e-60
Q7RTP0	329	Magnesium transporter NIP	no	no	0.803	0.860	0.385	2e-51

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  285 bits (730), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 202/322 (62%), Gaps = 5/322 (1%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A     RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G++S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V   K LG ++K  F GK  L +P TW  +L + +CV  Q+NYLN+ALD FNT++V+PIY
Sbjct: 193 VSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS-----PS 304
           YV FT+  I  S I+FK+W       +I  + GF  ++ G  LLH  KD   S      S
Sbjct: 253 YVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLSSLPVS 312

Query: 305 FRGGYSSLTPGLSPITPTLSTR 326
           FR    ++   LS +   L+  
Sbjct: 313 FRKDEKAVNGSLSSMYEVLNNN 334

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  285 bits (729), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 202/322 (62%), Gaps = 5/322 (1%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V  VK LG ++K  F GK  L +P  W  +L + +CV  Q+NYLN+ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS-----PS 304
           YV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S      S
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 305 FRGGYSSLTPGLSPITPTLSTR 326
           FR    ++   LS +   L+  
Sbjct: 313 FRKDEKAMNGNLSNMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  285 bits (729), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 202/322 (62%), Gaps = 5/322 (1%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  ILIF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V  VK LG ++K  F GK  L +P  W  +L + +CV  Q+NYLN+ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS-----PS 304
           YV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S      S
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 305 FRGGYSSLTPGLSPITPTLSTR 326
           FR    ++   LS +   L+  
Sbjct: 313 FRKDEKAMNGNLSNMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  280 bits (717), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 199/322 (61%), Gaps = 5/322 (1%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA+ SS FIG SFI+KKKGL R A    +RAG GG  YL E LWW G+  M  GEVA
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS++VSA+L+ + L+E+L   G +GC++ I GS ++VIHAP+
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  I ++ E+      P F+++   V+++  I IF   PR G TN LV+I ICS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V  VK LG ++K    GK  L +P  W  +  + +CV  Q+NYLN+ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS-----PS 304
           YV FT+  +  S I+FK+W       +I  + GF  ++ G  LLH  KD   S      S
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVS 312

Query: 305 FRGGYSSLTPGLSPITPTLSTR 326
           FR    ++   LS +   L+  
Sbjct: 313 FRKDEKAMNGNLSSMYEVLNNN 334

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  279 bits (714), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 199/291 (68%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA LS F IG+S I+KKKGL R  A    RA  GG+ YL +P+WW GMA M  GEVA
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA +VTPLGALS+++SA+ + + L E L  LG LGCV+C+AGS ++VIHAP+
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPK 180

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +T+V E+ S      F+++   ++V   ILIF  APR G  N L++I ICS++GS S
Sbjct: 181 EEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFS 240

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V +VK LG +++  F+G   + +P  +   L++ + +I+Q+N+LN+ALD FNT++V PIY
Sbjct: 241 VTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIY 300

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           YV FT++ + +S+++FK+W   +A  I+  + GFV ++ G  +LH  KD +
Sbjct: 301 YVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLD 351

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 197/293 (67%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  LA LSSF IGSS I+KKKGL R  A    RA  GGF YL + +WW G   M  GEVA
Sbjct: 121 GLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEVA 180

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA +VTPLGALS+++SA+L+ + L E L  LG LGCV+C+AGS ++VIHAP+
Sbjct: 181 NFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAPE 240

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +T++ E+ S      F+++   ++V   ILIF  APR G  N L++I ICS++G+ S
Sbjct: 241 EEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFS 300

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V +VK LG ++K  F+G   + +P  +   L++A+ +  Q+N+LN+ALD FNT++V PIY
Sbjct: 301 VAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIY 360

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 302
           YV FT++ + +S+I+FK+W   +A  I   + GFV ++ G  +LH  KD + S
Sbjct: 361 YVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDIS 413

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  257 bits (656), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 198/291 (68%), Gaps = 4/291 (1%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A     RAG GG +YL E LWW G+  M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E+L   G +GC++ + GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   + V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLV--VAICVIMQMNYLNKALDTFNTAVVSP 247
           V SVK LG ++K   E K   +Y D  FF+L+  +A+ V  Q+NYLNKALDTFNT++V+P
Sbjct: 251 VSSVKGLGIAIKELLERKP--VYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTP 308

Query: 248 IYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298
           IYYV FTS+ +  S I+F++W G  A  II  + GF  +++G  LLH  K+
Sbjct: 309 IYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  234 bits (598), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 197/291 (67%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A+    RAG GG +YL E LWWVG+  M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E L   G +GC++ I GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   V V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V SVK LG ++K   E K    +P  +  + V+ + V  Q+NYLNKALDTFNT++V+PIY
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIY 310

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           YV FTS+ +  S I+F++W G TA  II  + GF  ++ G  LLH  K+ +
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  231 bits (590), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/291 (49%), Positives = 196/291 (67%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G VLA+ SS FIGSSFI+KKKGL + A+    RAG GG +YL E LWWVG+  M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF AYAFAPA LVTPLGALS+++SA+L+ + L+E L   G +GC++ I GS ++VIHAPQ
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
           E  +TS+ E+      P F+ +   + V+  +LI   AP+ G TN LV+I ICSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 190 VMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIY 249
           V SVK LG ++K   E K    +P  +  + V+ + V  Q+NYLNKALDTFNT++V+PIY
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 250 YVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           YV FTS+ +  S I+F++W G TA  II  + GF  ++ G  LLH  K+ +
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/293 (38%), Positives = 177/293 (60%), Gaps = 10/293 (3%)

Query: 10  GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVA 69
           G  +A++SS   GS+F+++KKG+        VRA   G +YL + +WW G   M VG++ 
Sbjct: 31  GLGVAVVSSLVNGSTFVLQKKGI--------VRAKRRGTSYLTDIVWWAGTIAMAVGQIG 82

Query: 70  NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129
           NF+AY   P VLVTPLGAL +   ++LA ++L EKL  LG LGC++  AGS++++IH+P+
Sbjct: 83  NFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPK 142

Query: 130 ESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLS 189
              +T+  E+    T P F+ Y+  V++++ +LIF  AP  G TN +V+I ICSL+GS +
Sbjct: 143 SESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFT 202

Query: 190 VMSVKALGTSLK--LTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSP 247
           V S K +G + +  L     +Q         + V+   +I+Q  Y+NKAL+ F+++V   
Sbjct: 203 VPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGA 262

Query: 248 IYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           IYYV+FT+L +LAS I+F++W        +   CGF  V  G +L+   K+F 
Sbjct: 263 IYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFN 315

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
255572181	346	Non-imprinted in Prader-Willi/Angelman s	0.960	0.976	0.812	1e-161
356501407	349	PREDICTED: magnesium transporter NIPA2-l	0.977	0.985	0.787	1e-158
225436600	350	PREDICTED: magnesium transporter NIPA2 [	0.977	0.982	0.802	1e-158
356554108	349	PREDICTED: magnesium transporter NIPA2-l	0.977	0.985	0.784	1e-157
449442573	348	PREDICTED: magnesium transporter NIPA2-l	0.980	0.991	0.794	1e-154
449476132	348	PREDICTED: magnesium transporter NIPA2-l	0.980	0.991	0.794	1e-154
224054534	299	predicted protein [Populus trichocarpa]	0.849	1.0	0.876	1e-149
226531368	355	non-imprinted in Prader-Willi/Angelman s	0.965	0.957	0.757	1e-146
242088465	357	hypothetical protein SORBIDRAFT_09g02537	0.965	0.952	0.754	1e-146
357494007	349	Magnesium transporter NIPA2 [Medicago tr	0.974	0.982	0.762	1e-144

>gi|255572181|ref|XP_002527030.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223533592|gb|EEF35330.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/346 (81%), Positives = 312/346 (90%), Gaps = 8/346 (2%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FSKDNLKGF+LAL SS FIG+SFIIKKKGLRRAAAASGVRAGVGGF+YLLEPLWW+GM
Sbjct: 1   MDFSKDNLKGFILALSSSAFIGASFIIKKKGLRRAAAASGVRAGVGGFSYLLEPLWWLGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MI+GEVANFVAYAFAPAVL+TPLGALSIIVSAVLAHFIL+EKL +LG+LGCVMCIAGS
Sbjct: 61  FTMIIGEVANFVAYAFAPAVLITPLGALSIIVSAVLAHFILNEKLQKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAPQE PITS+QEIWS+ATQPAFLLYVASVIVLVFILIFHF+PRCG+++ LVF G
Sbjct: 121 IIIVIHAPQEHPITSIQEIWSMATQPAFLLYVASVIVLVFILIFHFSPRCGHSDVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKA+GT+LKL+ EG NQLLYP+TW+F+ +V  CVI QMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKAVGTALKLSLEGNNQLLYPETWYFVSIVVTCVITQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTAVVSPIYYVMFTSLTILASVIMFKDWDGQ   SI SEICGFVVVLSGT+LLH+T+DFE
Sbjct: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQNIGSITSEICGFVVVLSGTVLLHSTRDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQ-DVPSED 345
           RS SFRGGY       +P++PTLST LCSG  E  K+++ DVPS D
Sbjct: 301 RSSSFRGGY-------APLSPTLSTGLCSGKAEFFKYEEGDVPSAD 339

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501407|ref|XP_003519516.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/357 (78%), Positives = 311/357 (87%), Gaps = 13/357 (3%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  SK+NLKG +LAL+SS FIG+SFIIKK+GLRRAAA SGVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSKENLKGLILALVSSGFIGASFIIKKQGLRRAAAVSGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLA  IL EKL  LGILGC+MCIAGS
Sbjct: 61  ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADIILKEKLHNLGILGCIMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAP+E PITSV EIW++ATQPAFL YV SVIVLVFIL+FHFAPRCG+TN LVF G
Sbjct: 121 IIIVIHAPKEQPITSVLEIWNMATQPAFLAYVGSVIVLVFILVFHFAPRCGHTNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL+YP+TWFFMLVVAICVIMQMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIYPETWFFMLVVAICVIMQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+  +I+SEICGF++VLSGTI+LH TKDFE
Sbjct: 241 NTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIVSEICGFIIVLSGTIMLHATKDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQDVPSEDFC----RQEMY 352
           RS SFRG          P++PTLS RL +GNG+ LLK D++  S +      RQE+Y
Sbjct: 301 RSSSFRGS--------DPLSPTLSARLFTGNGDSLLKQDEENGSPESNMRSRRQELY 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436600|ref|XP_002279595.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296083833|emb|CBI24221.3| unnamed protein product [Vitis vinifera]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/355 (80%), Positives = 316/355 (89%), Gaps = 11/355 (3%)

Query: 2   AFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA 61
            FS +N KGFVLALLSS FIG+SFIIKKKGLRRAAA SGVRAGVGG+ YLLEPLWW+GM 
Sbjct: 3   GFSTNNFKGFVLALLSSGFIGASFIIKKKGLRRAAAVSGVRAGVGGYAYLLEPLWWLGMI 62

Query: 62  IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSI 121
            MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LGILGCVMCI+GS+
Sbjct: 63  TMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGILGCVMCISGSV 122

Query: 122 IIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGI 181
           IIVIHAPQE  I+SVQEIW++ATQ AFLLYV SV+V+VFILIFHFAP+CG+TN LVF GI
Sbjct: 123 IIVIHAPQERSISSVQEIWNMATQTAFLLYVGSVVVVVFILIFHFAPQCGSTNVLVFTGI 182

Query: 182 CSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFN 241
           CSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TWFFM+VVAICVI QMNYLNKALDTFN
Sbjct: 183 CSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWFFMVVVAICVITQMNYLNKALDTFN 242

Query: 242 TAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER 301
           TAVVSPIYYVMFTSLTILASVIMFKDWDGQ+  SIISEICGF+VVLSGTILL+ TKD+E 
Sbjct: 243 TAVVSPIYYVMFTSLTILASVIMFKDWDGQSGGSIISEICGFIVVLSGTILLNVTKDYED 302

Query: 302 SPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQD--VPSEDFC--RQEMY 352
           S SFRG Y        P++ +LS RLCSGNGELLKHD++  V S++ C  RQE+Y
Sbjct: 303 S-SFRGIYH------PPLSSSLSARLCSGNGELLKHDEENLVSSDEICLRRQELY 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554108|ref|XP_003545391.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/357 (78%), Positives = 309/357 (86%), Gaps = 13/357 (3%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  SK+NLKG +LAL+SS FIG+SFIIKK+GLRRAAA  GVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSKENLKGLILALVSSGFIGASFIIKKQGLRRAAAVYGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MI GEVANFVAYAFAPAVLVTPLGALSIIVSAVLA  IL EKL  LGILGC+MCIAGS
Sbjct: 61  ITMIAGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADIILKEKLHNLGILGCIMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           III IHAP+E PITSV EIW++ATQPAFL YV SVIVLVFIL+FHFAPRCG+TN LVF G
Sbjct: 121 IIIFIHAPKEQPITSVLEIWNMATQPAFLAYVGSVIVLVFILVFHFAPRCGHTNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL+YP+TWFFMLVVAICVIMQMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIYPETWFFMLVVAICVIMQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+  +I+SEICGF+VVLSGTI+LH TKDFE
Sbjct: 241 NTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIVSEICGFIVVLSGTIMLHATKDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQD--VPSEDFC--RQEMY 352
           RS SFRG         +P +PTLS RL +GNG+ LLK D++   P  + C  RQE+Y
Sbjct: 301 RSSSFRGS--------APSSPTLSARLFTGNGDSLLKQDEENGSPESNMCSRRQELY 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442573|ref|XP_004139056.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/355 (79%), Positives = 314/355 (88%), Gaps = 10/355 (2%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNL G +LALLSS FIG+SFIIKKKGLRRAAAASGVRAGVGG+TYLLEPLWW+GM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
            IMIVGE ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LG+LGCVMCIAGS
Sbjct: 61  FIMIVGEAANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           +IIV+HAP+E  ITSVQEIW++ATQPAFLLY+ SV+VLVFIL+ HFAPRCG++N LVF G
Sbjct: 121 VIIVVHAPRELSITSVQEIWTMATQPAFLLYMGSVVVLVFILVIHFAPRCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TW FMLVV  CVI QMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWLFMLVVVTCVITQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+ A+IISEICGFVVVLSGTILL   KDFE
Sbjct: 241 NTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGATIISEICGFVVVLSGTILLQVAKDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKH-DQDVPSEDFCR--QEMY 352
           RS SFR  +   TPG    +P+LSTRLC GNGEL K+ D++V SE+ C   QE Y
Sbjct: 301 RSSSFRANH---TPG----SPSLSTRLCPGNGELAKYNDEEVSSEEICLRIQESY 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449476132|ref|XP_004154650.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/355 (79%), Positives = 314/355 (88%), Gaps = 10/355 (2%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNL G +LALLSS FIG+SFIIKKKGLRRAAAASGVRAGVGG+TYLLEPLWW+GM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
            IMIVGE ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL E+L +LG+LGCVMCIAGS
Sbjct: 61  FIMIVGEAANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILKERLHKLGVLGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           +IIV+HAP+E  ITSVQEIW++ATQPAFLLY+ SV+VLVFIL+ HFAPRCG++N LVF G
Sbjct: 121 VIIVVHAPRELSITSVQEIWNMATQPAFLLYMGSVVVLVFILVIHFAPRCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKALGTSLKLTFEGKNQL++P+TW FMLVV  CVI QMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLIFPETWLFMLVVVTCVITQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTA+VSPIYYVMFT+LTILASVIMFKDWDGQ+ A+IISEICGFVVVLSGTILL   KDFE
Sbjct: 241 NTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGATIISEICGFVVVLSGTILLQVAKDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKH-DQDVPSEDFCR--QEMY 352
           RS SFR  +   TPG    +P+LSTRLC GNGEL K+ D++V SE+ C   QE Y
Sbjct: 301 RSSSFRANH---TPG----SPSLSTRLCPGNGELAKYNDEEVSSEEICLRIQESY 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054534|ref|XP_002298308.1| predicted protein [Populus trichocarpa] gi|222845566|gb|EEE83113.1| predicted protein [Populus trichocarpa]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/299 (87%), Positives = 282/299 (94%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M FS+DNLKGFVLAL SS FIG+SFIIKKKGLRRAAAASGVRAGVGGF+YLLEPLWW+GM
Sbjct: 1   MGFSQDNLKGFVLALSSSAFIGASFIIKKKGLRRAAAASGVRAGVGGFSYLLEPLWWLGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+EKL QLGILGCVMCIAGS
Sbjct: 61  ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNEKLHQLGILGCVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           I+IVIHAPQESPITSVQEIWS+ATQPAFLLYV SVIVLVFI+IFHFAP+CG++N LVF G
Sbjct: 121 IVIVIHAPQESPITSVQEIWSMATQPAFLLYVGSVIVLVFIMIFHFAPQCGHSNVLVFTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICS MGSLSVMSVKA+GT+LKLTFEG NQLLYP+TWFF+ +VA CVI QMNYLNKALDTF
Sbjct: 181 ICSFMGSLSVMSVKAVGTALKLTFEGNNQLLYPETWFFVFIVATCVITQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF 299
           NTAVVSPIYYVMFTSLTILASVIMFKDWDGQ   SIISEICGF+VVLSGTI+LHTT++F
Sbjct: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQNVGSIISEICGFIVVLSGTIVLHTTREF 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226531368|ref|NP_001148908.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays] gi|194707234|gb|ACF87701.1| unknown [Zea mays] gi|195623140|gb|ACG33400.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays] gi|413946035|gb|AFW78684.1| non-imprinted in Prader-Willi/Angelman syndrome region protein 1 [Zea mays]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/354 (75%), Positives = 304/354 (85%), Gaps = 14/354 (3%)

Query: 3   FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAI 62
            S DN+KG VLALLSS FIG+SFIIKKKGLRRAA ASGVRAGVGG++YL+EPLWWVGM I
Sbjct: 12  LSTDNMKGIVLALLSSGFIGASFIIKKKGLRRAAVASGVRAGVGGYSYLMEPLWWVGMII 71

Query: 63  MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122
           MIVGE+ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+E+L  LG+LGCVMCIAGS++
Sbjct: 72  MIVGEIANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 131

Query: 123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGIC 182
           IVIHAPQE  ITSV+EIW++ATQPAFLLYVASVIV+VF+L+F+F+P  G +N L++  IC
Sbjct: 132 IVIHAPQEQEITSVKEIWNMATQPAFLLYVASVIVIVFVLVFYFSPLYGQSNVLIYTAIC 191

Query: 183 SLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNT 242
           SLMGSLSVMSVKALGTSLKLTFEG NQL+YP+TWFFMLVVA CV+ QMNYLNKALDTFNT
Sbjct: 192 SLMGSLSVMSVKALGTSLKLTFEGTNQLIYPETWFFMLVVATCVLTQMNYLNKALDTFNT 251

Query: 243 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 302
           A+VSPIYYVMFT+LTILASVIMFKDW GQ+  S+ISEICG VVVLSGTILLH TKD+ER 
Sbjct: 252 AIVSPIYYVMFTTLTILASVIMFKDWSGQSPGSVISEICGLVVVLSGTILLHVTKDYERI 311

Query: 303 PSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSED----FCRQEMY 352
           P  R  Y       +P++P+L+TRL   NGELLKH  D  + D      RQEMY
Sbjct: 312 PQSRSVY-------APLSPSLTTRL---NGELLKHVVDERTSDEEKALRRQEMY 355

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088465|ref|XP_002440065.1| hypothetical protein SORBIDRAFT_09g025370 [Sorghum bicolor] gi|241945350|gb|EES18495.1| hypothetical protein SORBIDRAFT_09g025370 [Sorghum bicolor]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/354 (75%), Positives = 304/354 (85%), Gaps = 14/354 (3%)

Query: 3   FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAI 62
            S DN+KG VLALLSS FIG+SFIIKKKGLRRAAAA+GVRAGVGG++YL+EPLWWVGM  
Sbjct: 14  LSTDNMKGIVLALLSSGFIGASFIIKKKGLRRAAAATGVRAGVGGYSYLMEPLWWVGMIT 73

Query: 63  MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122
           MIVGE+ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFIL+E+L  LG+LGCVMCIAGS++
Sbjct: 74  MIVGEIANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 133

Query: 123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGIC 182
           IVIHAPQE  ITSV+EIW++A QPAFLLYVASVIV+VF+L+F+F+P  G +N L++  IC
Sbjct: 134 IVIHAPQEQEITSVREIWNMAIQPAFLLYVASVIVIVFVLVFYFSPLYGQSNVLIYTAIC 193

Query: 183 SLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNT 242
           SLMGSLSVMSVKALGTSLKLTFEG NQL+YP+TWFFMLVVA CV+ QMNYLNKALDTFNT
Sbjct: 194 SLMGSLSVMSVKALGTSLKLTFEGTNQLIYPETWFFMLVVATCVLTQMNYLNKALDTFNT 253

Query: 243 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 302
           A+VSPIYYVMFT+LTILASVIMFKDW GQ+  SIISEICG VVVLSGTILLH TKD+ER 
Sbjct: 254 AIVSPIYYVMFTTLTILASVIMFKDWSGQSPGSIISEICGLVVVLSGTILLHVTKDYERI 313

Query: 303 PSFRGGYSSLTPGLSPITPTLSTRLCSGNGELLKHDQDVPSED----FCRQEMY 352
           P  R  Y       +P++P+L+TRL   NGELLKH +D  + D      RQEMY
Sbjct: 314 PQSRSVY-------APLSPSLTTRL---NGELLKHVEDERTSDEEKALRRQEMY 357

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494007|ref|XP_003617292.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355518627|gb|AET00251.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/353 (76%), Positives = 305/353 (86%), Gaps = 10/353 (2%)

Query: 1   MAFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM 60
           M  S +N+ G +LAL SS FIGSSFIIKK+GLRRAA+  GVRAGVGG+ YLLEPLWWVGM
Sbjct: 1   MGLSNENVTGLILALASSLFIGSSFIIKKQGLRRAASTYGVRAGVGGYYYLLEPLWWVGM 60

Query: 61  AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120
             MIVGEVANF+AYAFAPAVLVTPLGALSIIVSAVLA  IL E+L +LGILG VMCIAGS
Sbjct: 61  ITMIVGEVANFIAYAFAPAVLVTPLGALSIIVSAVLADLILKERLHKLGILGIVMCIAGS 120

Query: 121 IIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG 180
           IIIVIHAP+E PITSV EIW++ATQPAFL YV SV+VLVF ++FHFAP CG+TN LV+ G
Sbjct: 121 IIIVIHAPKEEPITSVLEIWNMATQPAFLAYVGSVVVLVFFMVFHFAPTCGHTNVLVYTG 180

Query: 181 ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTF 240
           ICSLMGSLSVMSVKALGTSLKLTFEG NQL+YP TWFFMLVVAICV+MQMNYLNKALDTF
Sbjct: 181 ICSLMGSLSVMSVKALGTSLKLTFEGNNQLVYPQTWFFMLVVAICVVMQMNYLNKALDTF 240

Query: 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300
           NTA+VSPIYYVMFT+LTILAS+IMFKDWDGQ+ ++I+SEICGF+VVLSGTI+LH TKDFE
Sbjct: 241 NTAIVSPIYYVMFTTLTILASIIMFKDWDGQSFSTIMSEICGFIVVLSGTIMLHLTKDFE 300

Query: 301 RSPSFRGGYSSLTPGLSPITPTLSTRLCSGNGE-LLKHDQ--DVPSEDFCRQE 350
           RS SFRGG      GL P +PTLS RL +GNG+ LLK D+  + P + F R++
Sbjct: 301 RSHSFRGG------GL-PSSPTLSVRLYTGNGDSLLKDDEENESPEDMFSRRQ 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.880	0.842	0.614	8.2e-99
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.869	0.792	0.610	2.9e-96
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.727	0.785	0.688	5.9e-96
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.852	0.874	0.607	2e-95
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.721	0.774	0.673	4.2e-95
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.928	0.976	0.551	3.9e-92
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.769	0.806	0.628	2.7e-91
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.704	0.673	0.495	8e-69
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.704	0.673	0.495	8e-69
UNIPROTKB|F1NMK8	352	NIPAL4 "Uncharacterized protei	0.713	0.713	0.466	2.3e-64

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 191/311 (61%), Positives = 222/311 (71%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YLLEPLWWVGM  M
Sbjct:    16 SSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGG-YSYLLEPLWWVGMITM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH ILHEKL   G+LGCV+C+ GSI I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV ++W+LAT+PAFLLY A+V+    ILI  F P+ G ++ +V+IG+CS
Sbjct:   135 VLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTA 243
             L+GSLSVMSVKALG +LKLTF G NQL+YP TW F L+V  CVI QMNYLNKALDTFNTA
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTA 254

Query:   244 VVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSP 303
             VVSPIYYVMFTSLTILASVIMFKDWD Q    I++E+CGFV +LSGT LLH TKD     
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVDGS 314

Query:   304 SFRGGYSSLTP 314
             S  G  +   P
Sbjct:   315 SSLGNLALRLP 325

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
 Identities = 188/308 (61%), Positives = 219/308 (71%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YLLEPLWW+GM  M
Sbjct:    16 SSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGG-YSYLLEPLWWIGMITM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH IL EKL   GILGC +CI GS+ I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV E+W+LAT+PAFL Y A+V+    +LI  F P  G ++ +V+IG+CS
Sbjct:   135 VLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTA 243
             L+GSLSVMSVKALG +LKLTF G NQL YP TW F ++V  CVI QMNYLNKALDTFNTA
Sbjct:   195 LIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTA 254

Query:   244 VVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSP 303
             VVSPIYYVMFTSLTILASVIMFKDWD Q+   I++E+CGFV +LSGT LLHTT D     
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTDMVDGE 314

Query:   304 SFRGGYSS 311
             S +G  SS
Sbjct:   315 S-KGNLSS 321

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 177/257 (68%), Positives = 215/257 (83%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             +TYLLEPLWWVG+  M  GE+ANFVAY +APAVLVTPLGALSII+SAVLAHF+L EKL +
Sbjct:    45 YTYLLEPLWWVGLVTMTFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRK 104

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
             +G+ GCV CI GS++IVIHAPQE    SV+EIW LA QPAFL+YVA  + +V  LI +  
Sbjct:   105 MGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCE 164

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             P CG TN LV+IGICSLMGSL+VMS+KA+G ++KLTFEG NQ+ YP+TWFF +V AICV+
Sbjct:   165 PLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVV 224

Query:   228 MQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL 287
             MQM YLNKALDTFN A+VSPIYYVMFT+LTI+AS IMFKDW+GQ   SI SEICGF+ VL
Sbjct:   225 MQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVL 284

Query:   288 SGTILLHTTKDFER-SP 303
             +GT++LH+T++ E+ SP
Sbjct:   285 TGTVILHSTREEEQASP 301

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 183/301 (60%), Positives = 212/301 (70%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+KG VLA                                 ++YL EPLWW+GM  M
Sbjct:    16 SSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGG-YSYLYEPLWWIGMTTM 74

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             ++GE+ANF AYAFAPA+LVTPLGA+SII+SAVLAH IL EKL   GILGC +C+ GS  I
Sbjct:    75 LLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTI 134

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAPQE  I SV E+W+LAT+PAF+ Y + VI     LI  F P+ G TN +V+IGICS
Sbjct:   135 VLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICS 194

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTA 243
             L+GSLSVMSVKALG +LKLTF G NQL YP TW F LVV  CV+ Q+NYLNKALDTFNTA
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTA 254

Query:   244 VVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSP 303
             +VSPIYYVMFTSLTILASVIMFKDWD Q    I++EICGFV +LSGT LLH TKD     
Sbjct:   255 IVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVEGS 314

Query:   304 S 304
             S
Sbjct:   315 S 315

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
 Identities = 171/254 (67%), Positives = 212/254 (83%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             +TYLLEPLWW GM  MIVGE ANFVAY +APAVLVTPLGALSII+SAVLAHF+L EKL +
Sbjct:    45 YTYLLEPLWWAGMVTMIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKK 104

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
             +G+LGCV CI GS++IVIHAP+E    SV+EIW+LATQPAFL+YVA  + +V  LI HF 
Sbjct:   105 MGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFE 164

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             P CG TN LV+IGICSLMG+L+VMS+KA+G ++KLT EG +Q+ YP TW F++V   CV+
Sbjct:   165 PLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVV 224

Query:   228 MQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL 287
              Q+ YLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW GQ AAS+ SE+CGF+ VL
Sbjct:   225 TQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVL 284

Query:   288 SGTILLHTTKDFER 301
             +GT++LH T++ E+
Sbjct:   285 TGTMILHGTREEEQ 298

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
 Identities = 181/328 (55%), Positives = 222/328 (67%)

Query:     4 SKDNLKGFVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTYLLEPLWWVGMAIM 63
             S DN+ G +LA                                 + YL EP WW GM  M
Sbjct:     5 SPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGG-YGYLKEPWWWAGMITM 63

Query:    64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
             IVGEVANF AYAFAPA+LVTPLGALSII SAVLAHFIL EKL   GILGC++C+ GS  I
Sbjct:    64 IVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTI 123

Query:   124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
             V+HAP E  I SV++IW LA +P FL+Y A ++++V ILIF++ PR G T+ +V++GICS
Sbjct:   124 VLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICS 183

Query:   184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTA 243
             LMGSL+VMSVKA+  ++KLTF G NQ  Y +TW F+LVVA C I+Q+NYLNKALDTFNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTA 243

Query:   244 VVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERSP 303
             V+SP+YYVMFT+ TI+AS+IMFKDW  Q+   I +E+CGFV +LSGT LLH TKD   S 
Sbjct:   244 VISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSA 303

Query:   304 SFRGGYSSLTPGLSPITPTLSTRLCSGN 331
             S RG  S  T      T + S R  S +
Sbjct:   304 SGRGSISMPTRDTPVFTNSGSGRSSSSD 331

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
 Identities = 171/272 (62%), Positives = 209/272 (76%)

Query:    48 FTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQ 107
             + YL EP WW GM  MIVGE+ANF AYAFAPA+LVTPLGALSII SAVLAHFIL EKL  
Sbjct:    48 YGYLYEPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHM 107

Query:   108 LGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFA 167
              GILGCV+C+ GS  IV+HAP E  I SV+++W LAT+P FL Y A V+V+V  LIF++ 
Sbjct:   108 FGILGCVLCVVGSTTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYE 167

Query:   168 PRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVI 227
             PR G T+ +V++GICSLMGSL+VMSVKA+  ++KLTF G NQ  Y   W F++VV IC I
Sbjct:   168 PRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCI 227

Query:   228 MQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVL 287
             +Q+NYLNKALD FNTAV+SP+YYVMFT+ TILAS+IMFKDW  Q+   I +E+CGFV +L
Sbjct:   228 LQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTIL 287

Query:   288 SGTILLHTTKDFERSPSFRGGYSSLTPGLSPI 319
             SGT LLH TKD   S S RG  +S +P  +P+
Sbjct:   288 SGTFLLHKTKDMGNSTSLRGS-TSHSPRDTPV 318

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 123/248 (49%), Positives = 177/248 (71%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL  P+WW GM  M +GE+ANF AY FAPA+LVTPLGALS+I+ AVLA   L E+L  LG
Sbjct:    47 YLQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLG 106

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              +GC +C+ GS+II++HAP +  + +V EI   ATQP F+ Y   V +    +I+   P+
Sbjct:   107 KMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPK 166

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              GNTN ++++ ICS +GS+SVMS+KA G +LKLT  G NQ  +  T+ F++VVA+C++ Q
Sbjct:   167 YGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQ 226

Query:   230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289
             MNY NKALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +A  IIS + GF+++ SG
Sbjct:   227 MNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSG 286

Query:   290 TILLHTTK 297
               LL+ ++
Sbjct:   287 VYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 123/248 (49%), Positives = 177/248 (71%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL  P+WW GM  M +GE+ANF AY FAPA+LVTPLGALS+I+ AVLA   L E+L  LG
Sbjct:    47 YLQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLG 106

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              +GC +C+ GS+II++HAP +  + +V EI   ATQP F+ Y   V +    +I+   P+
Sbjct:   107 KMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPK 166

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              GNTN ++++ ICS +GS+SVMS+KA G +LKLT  G NQ  +  T+ F++VVA+C++ Q
Sbjct:   167 YGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQ 226

Query:   230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289
             MNY NKALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +A  IIS + GF+++ SG
Sbjct:   227 MNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSG 286

Query:   290 TILLHTTK 297
               LL+ ++
Sbjct:   287 VYLLNISR 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NMK8 NIPAL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 117/251 (46%), Positives = 173/251 (68%)

Query:    50 YLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLG 109
             YL + LWW G+  M  GE ANF AYAFAPA +VTPLGALS+++SA+L+ ++L E+L  LG
Sbjct:    55 YLKDWLWWAGLLTMGGGEAANFAAYAFAPATIVTPLGALSVLISAILSSYLLGERLNLLG 114

Query:   110 ILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR 169
              LGC++ + GS ++VIHAP+E  +T++ E+     +P FL Y   ++ + F+LI + APR
Sbjct:   115 KLGCMLSLVGSTVMVIHAPEEEEVTTLDEMLFKLKEPGFLAYAVVLLAICFLLILYLAPR 174

Query:   170 CGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQ 229
              G +N L+++ ICS++G+ SV SVK LG ++K  F G+  L +P TW  ++ +   +  Q
Sbjct:   175 YGRSNILIYLTICSVIGAFSVSSVKGLGIAIKGFFAGQPVLQHPLTWILVITLVASITTQ 234

Query:   230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289
             +NYLNKALD FNT++V PIYYV+FT++ I  S+I+FK+W   T   II  +CGF+ ++ G
Sbjct:   235 INYLNKALDIFNTSLVFPIYYVLFTTIVITTSIILFKEWVAMTVVDIIGTVCGFLTIILG 294

Query:   290 TILLHTTKDFE 300
               LLH  KD +
Sbjct:   295 VFLLHAFKDMD 305

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.4658	0.9005	0.8805	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.4627	0.9005	0.8805	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.4627	0.9005	0.8805	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4534	0.9005	0.8830	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022247001 SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (350 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	352
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-145
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.003

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  413 bits (1063), Expect = e-145
 Identities = 187/299 (62%), Positives = 226/299 (75%), Gaps = 1/299 (0%)

Query: 4   SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIM 63
           + DN  G +LA+ SS FIGSSFIIKKKGL R A   G+RAG GG+ YL E LWW G+  M
Sbjct: 2   NTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLAR-GGMRAGEGGYGYLKEWLWWAGLLTM 60

Query: 64  IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123
           IVGE ANF AYAFAPA LVTPLGALS+I+SAVL+ F L+EKL   G LGCV+CI GS +I
Sbjct: 61  IVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVI 120

Query: 124 VIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICS 183
           VIHAP+E  I SV+E+W+LAT P FL+YV  V+ +V ILIF   PR G TN LV+I ICS
Sbjct: 121 VIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICS 180

Query: 184 LMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTA 243
           L+GSL+VMSVKALG ++KLTF GKNQL YP  W F++VV  CV+ Q+NYLNKALD FNT+
Sbjct: 181 LIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTS 240

Query: 244 VVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFERS 302
           +V+P+YYV FT+  I AS I+FK+W GQ+   I  E+CGF  +L GT LLH T+D E S
Sbjct: 241 IVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFS 299

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 55  LWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGC 113
           LW +    I  +      +A  + P   V  + AL+ + +A+L   +  ++LP+  +L  
Sbjct: 35  LWLILAGLIGFLFYALLCLALQYGPGW-VVAITALTPVFAALLGRLLFKQRLPKRELLAS 93

Query: 114 VMCIAGSIIIVIHAPQE 130
            + +AG +++ +     
Sbjct: 94  AIILAGVVLMQVTEATG 110

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	352
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.37
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.21
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.17
PRK15430	296	putative chloramphenical resistance permease RarD;	99.12
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.05
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.03
PLN00411	358	nodulin MtN21 family protein; Provisional	99.03
PRK11689	295	aromatic amino acid exporter; Provisional	98.95
PRK11272	292	putative DMT superfamily transporter inner membran	98.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.89
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.83
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.82
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.82
COG2510	140	Predicted membrane protein [Function unknown]	98.56
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.49
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.42
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.41
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.39
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.28
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.18
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.14
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.11
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.09
PRK13499	345	rhamnose-proton symporter; Provisional	98.08
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.9
PLN00411	358	nodulin MtN21 family protein; Provisional	97.77
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.76
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.74
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.68
PRK11689	295	aromatic amino acid exporter; Provisional	97.66
PRK11272	292	putative DMT superfamily transporter inner membran	97.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.49
PRK11431	105	multidrug efflux system protein; Provisional	97.44
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.4
COG2510	140	Predicted membrane protein [Function unknown]	97.38
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.27
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.19
COG2076	106	EmrE Membrane transporters of cations and cationic	97.12
COG2962	293	RarD Predicted permeases [General function predict	97.11
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.1
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.06
PRK11431	105	multidrug efflux system protein; Provisional	97.02
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.96
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.94
COG2076	106	EmrE Membrane transporters of cations and cationic	96.75
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.72
PRK15430	296	putative chloramphenical resistance permease RarD;	96.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.87
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.77
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.6
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.49
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	95.45
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.4
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	95.32
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.3
KOG2765	416	consensus Predicted membrane protein [Function unk	95.25
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.23
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.87
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	93.72
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.13
COG1742	109	Uncharacterized conserved protein [Function unknow	91.94
PRK02237	109	hypothetical protein; Provisional	90.93
KOG4831	125	consensus Unnamed protein [Function unknown]	90.77
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	89.74
KOG1580	337	consensus UDP-galactose transporter related protei	89.5
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	89.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	88.48
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	88.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	86.37
PRK13499	345	rhamnose-proton symporter; Provisional	85.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	85.37
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	84.33
KOG0569	485	consensus Permease of the major facilitator superf	84.21
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.88
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	83.51
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	83.4
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	82.89
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	81.88

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=9e-73  Score=533.33  Aligned_cols=299  Identities=68%  Similarity=1.154  Sum_probs=293.1

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHH
Q 018650            2 AFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVL   81 (352)
Q Consensus         2 ~~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~sl   81 (352)
                      .|+++|++|++||+.||++++.++++|||+++|.+.. +.|++.++++|+++|+||+|+++|++|+++||+||+|||+++
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~-~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasL   92 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGAS-GLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASL   92 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhh-cccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhh
Confidence            3789999999999999999999999999999998885 889998999999999999999999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHH
Q 018650           82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFI  161 (352)
Q Consensus        82 v~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~  161 (352)
                      |+|||++++++++++|+++||||++..+.+||++|++|++++|+|+|++++..|++|+|+++++|+|++|+.+.++++++
T Consensus        93 VtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~i  172 (335)
T KOG2922|consen   93 VTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLI  172 (335)
T ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 018650          162 LIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFN  241 (352)
Q Consensus       162 l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~  241 (352)
                      +++++.||+|++|+++|.++|+++|++|++++|+++++++++++|++|+.||.+|+++.+++.|+..|++|||||||.||
T Consensus       173 l~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fn  252 (335)
T KOG2922|consen  173 LIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFN  252 (335)
T ss_pred             HheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 018650          242 TAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER  301 (352)
Q Consensus       242 a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~~  301 (352)
                      ++++.|+||++||++++++|.|+|+||++++..++.+++||+++++.|+++|+++||++.
T Consensus       253 tslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  253 TSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI  312 (335)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence            999999999999999999999999999999999999999999999999999999999884

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=1.1e-65  Score=494.48  Aligned_cols=298  Identities=47%  Similarity=0.873  Sum_probs=285.3

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHH
Q 018650            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLV   82 (352)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv   82 (352)
                      |-+++++|+++|++||++++.|.++|||+++|+++. +.|++.+.++|++||+||+|++++++|+++|++||+++|+++|
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~-~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv   79 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG-SLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLV   79 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHH
Confidence            568999999999999999999999999999998874 5665555789999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 018650           83 TPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFIL  162 (352)
Q Consensus        83 ~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l  162 (352)
                      ||++++++++|+++|+++||||++++|++|++++++|+++++.++|++++.+|++|+++++.+|+|+.|+.+..+..+++
T Consensus        80 ~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L  159 (300)
T PF05653_consen   80 APLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILIL  159 (300)
T ss_pred             HHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888877777


Q ss_pred             HHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 018650          163 IFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNT  242 (352)
Q Consensus       163 ~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a  242 (352)
                      +++..||+|++++++|.++||++|++|++++|++++.++++++|++||.||.+|+++++.+.|++.|++||||||++||+
T Consensus       160 ~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~  239 (300)
T PF05653_consen  160 IFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDT  239 (300)
T ss_pred             HHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            78888899999999999999999999999999999999998999999999999999999999999999999999999999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 018650          243 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER  301 (352)
Q Consensus       243 ~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~~  301 (352)
                      ++++|++|++||++++++|.++||||+++++.++.++.+|+++++.|+++|+++||+++
T Consensus       240 ~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  240 SLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             eEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence            99999999999999999999999999999999999999999999999999999999774

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.37  E-value=1.8e-10  Score=109.80  Aligned_cols=254  Identities=16%  Similarity=0.185  Sum_probs=147.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------c----ccCCcccccccchhH---HHHHHHHHHHHHHHHH
Q 018650           11 FVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------V----RAGVGGFTYLLEPLW---WVGMAIMIVGEVANFV   72 (352)
Q Consensus        11 v~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-----------~----~~~~~~~~~l~~p~W---~~G~~l~~~g~~~~~~   72 (352)
                      +++.+.++++.+..+++.|+...++..--.           +    +.....++..++..|   ..+.........+.+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ   82 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            578889999999999999976544322100           0    000000111111122   1233344566778888


Q ss_pred             HHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHH
Q 018650           73 AYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYV  152 (352)
Q Consensus        73 Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~  152 (352)
                      ++...|.+.++|+...+.+++.+++.+++|||+++++|.|+.+++.|+.++..  ++.+. .+.         .+ ..+.
T Consensus        83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~~---------~g-~~~~  149 (281)
T TIGR03340        83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HRR---------KA-YAWA  149 (281)
T ss_pred             HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cch---------hH-HHHH
Confidence            99999999999999999999999999999999999999999999999987653  22211 111         11 1111


Q ss_pred             HHHHHHHHHHHHhh-cccCCC-----cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcc-ccchHHHHHHHHHHHH
Q 018650          153 ASVIVLVFILIFHF-APRCGN-----TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQ-LLYPDTWFFMLVVAIC  225 (352)
Q Consensus       153 ~~~~~~~~~l~~~~-~~r~g~-----~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~-~~~~~~y~~l~~~v~~  225 (352)
                      ..  ..++...+.. .++..+     .....+...+.+.++.-.....     ..  .++... ...+..+.++.....+
T Consensus       150 l~--aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~  220 (281)
T TIGR03340       150 LA--AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-----LK--RHGRSMFPYARQILPSATLGGLM  220 (281)
T ss_pred             HH--HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-----HH--HhccchhhhHHHHHHHHHHHHHH
Confidence            11  1111111222 222211     1111122222222211111000     00  011111 1112223333333333


Q ss_pred             HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650          226 VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  293 (352)
Q Consensus       226 ~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL  293 (352)
                      ......+.++++++.+++.+.+..|. .++++++.|.++++|..+.      ....|.++++.|++++
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~~------~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWYL------TRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCccH------HHHHHHHHHHHhHHhC
Confidence            34444678899999999999999887 4889999999999997653      5667888899998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.21  E-value=6.6e-11  Score=100.90  Aligned_cols=116  Identities=18%  Similarity=0.184  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccch--hHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh
Q 018650            9 KGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEP--LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG   86 (352)
Q Consensus         9 iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p--~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~   86 (352)
                      +|.++.+.+.++.+.|+++.|+|.++.++.+.............+|  +-+.|++++++++.++..++...|++...|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            4778899999999999999999988765321110000011235567  78899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHH--HhcCcCCccchhhHHHHhhhhheee
Q 018650           87 ALSIIVSAVLAHF--ILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        87 a~~lv~~~~la~~--~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      ++.+++..+.+..  ++||+++..+++|++++++|+.++.
T Consensus        82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            9999888888886  7999999999999999999999874

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.17  E-value=9.8e-09  Score=98.77  Aligned_cols=262  Identities=17%  Similarity=0.258  Sum_probs=143.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc---CCcccccc---cch---hHHHHHHHHHHHHHHHHHHHhh-chh
Q 018650           12 VLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA---GVGGFTYL---LEP---LWWVGMAIMIVGEVANFVAYAF-APA   79 (352)
Q Consensus        12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~---~~~~~~~l---~~p---~W~~G~~l~~~g~~~~~~Al~~-ap~   79 (352)
                      ++++.++++-+.....-|.+..+.+...  ..|-   ..-...+.   +++   ....|+........+.+.++.. .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            4567778888888888887654321110  1110   00000011   111   1112332222333455667766 588


Q ss_pred             HHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHH-HH
Q 018650           80 VLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVI-VL  158 (352)
Q Consensus        80 slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~-~~  158 (352)
                      +...-+.....+++.+++++++|||+++++++|+++.++|+.++..  +..+.. +. ..      .+- .+..... ..
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~--~~~~~~-~~-~~------~G~-~l~l~aal~~  155 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE--DSLNGQ-HV-AM------LGF-MLTLAAAFSW  155 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc--ccCCCc-ch-hH------HHH-HHHHHHHHHH
Confidence            8888888999999999999999999999999999999999887752  211111 10 00      111 1111111 11


Q ss_pred             HH-HHHHh-hcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCc------cccchHHH-HHHHHHHHHHHHH
Q 018650          159 VF-ILIFH-FAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKN------QLLYPDTW-FFMLVVAICVIMQ  229 (352)
Q Consensus       159 ~~-~l~~~-~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~------~~~~~~~y-~~l~~~v~~~l~Q  229 (352)
                      .+ .+..+ ..++.+......+.....++++.-...   .+. .   .++.+      ...++..| .++..++.+...+
T Consensus       156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~  228 (299)
T PRK11453        156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFV---ASL-I---LDGSATMIHSLVTIDMTTILSLMYLAFVATIVG  228 (299)
T ss_pred             HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHH---HHH-H---hcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence            11 11111 111111111222222112222211110   000 0   11111      11233333 3344455667777


Q ss_pred             HHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       230 ~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      ....++++++.++..+.++. ...++++++.|++++||..+.      ...+|.+++++|+++....+.
T Consensus       229 ~~l~~~~l~~~~a~~~s~~~-~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        229 YGIWGTLLGRYETWRVAPLS-LLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHhcchh
Confidence            78889999999998888765 578999999999999996553      457888889999987765544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.12  E-value=2.2e-08  Score=96.25  Aligned_cols=249  Identities=12%  Similarity=0.111  Sum_probs=144.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Ccc---------------cC-CcccccccchhH----HHHHH
Q 018650            4 SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVR---------------AG-VGGFTYLLEPLW----WVGMA   61 (352)
Q Consensus         4 ~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~---------------~~-~~~~~~l~~p~W----~~G~~   61 (352)
                      |+++..|.+++++++++.+...+.-|.. .+.+...  -.|               .+ ...++..+++++    ..|..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            4577899999999999999998888753 1110000  000               00 000001122332    25556


Q ss_pred             HHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHH
Q 018650           62 IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWS  141 (352)
Q Consensus        62 l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~  141 (352)
                      ...+...+.+.++...|.+...-+.....++.++++.+++|||+++++|.|+++.++|++++.  .|.+ +.    .+. 
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~--~~~~-~~----~~~-  153 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL--WTFG-SL----PII-  153 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH--HHcC-Cc----cHH-
Confidence            667788899999999999999999999999999999999999999999999999999998764  2211 10    010 


Q ss_pred             HhcChhHHHHHHHHHHHHHHHHHh-hcccCCCcc-h-HHHHHH-HHhhhhHHHHHHHHHHHHHHHhhcCCccc-c-chHH
Q 018650          142 LATQPAFLLYVASVIVLVFILIFH-FAPRCGNTN-A-LVFIGI-CSLMGSLSVMSVKALGTSLKLTFEGKNQL-L-YPDT  215 (352)
Q Consensus       142 ~~~~p~fl~y~~~~~~~~~~l~~~-~~~r~g~~~-~-~~~~~i-~gllg~~tvl~~K~v~~~l~~~~~g~~~~-~-~~~~  215 (352)
                                .  ....++...+. ..+|...++ . ...... ...++....         +.....+.... . .+..
T Consensus       154 ----------~--l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  212 (296)
T PRK15430        154 ----------A--LGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL---------FAIADSSTSHMGQNPMSL  212 (296)
T ss_pred             ----------H--HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---------HHHccCCcccccCCcHHH
Confidence                      0  00111111111 122322111 1 111110 001111000         00001111111 1 1222


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650          216 WFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT  290 (352)
Q Consensus       216 y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv  290 (352)
                      +..+ ..++.+.+.| .+.|+++++.+++.+.++.|. .++++++.|+++++|..+  +    ....|.++++.|+
T Consensus       213 ~~~~~~~g~~t~i~~-~~~~~a~~~~~a~~~s~~~~l-~Pv~a~~~g~l~l~E~~~--~----~~~~G~~lI~~~~  280 (296)
T PRK15430        213 NLLLIAAGIVTTVPL-LCFTAAATRLRLSTLGFFQYI-GPTLMFLLAVTFYGEKPG--A----DKMVTFAFIWVAL  280 (296)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHcCCCC--H----HHHHHHHHHHHHH
Confidence            2222 2334455665 688999999999988888776 778999999999999755  3    3344444554444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.05  E-value=4.6e-08  Score=91.23  Aligned_cols=205  Identities=16%  Similarity=0.182  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650           57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (352)
Q Consensus        57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~  136 (352)
                      ..|.+...+...+.+.|+.+.|.+...++..+..+++.+++..++|||+++++++|+.++++|+.++...+  +.+. + 
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~-  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N-  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c-
Confidence            55666667888899999999999999999999999999999999999999999999999999998875322  1111 1 


Q ss_pred             HHHHHHhcChhHHHHHHHHHHH-HH-HHHHhhcc-cCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccch
Q 018650          137 QEIWSLATQPAFLLYVASVIVL-VF-ILIFHFAP-RCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYP  213 (352)
Q Consensus       137 ~el~~~~~~p~fl~y~~~~~~~-~~-~l~~~~~~-r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~  213 (352)
                        .      .+.+ +.....+. .+ ....+... +.+......+. .....++.-.. .-       ....+.....++
T Consensus       127 --~------~G~~-~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~-------~~~~~~~~~~~~  188 (260)
T TIGR00950       127 --P------AGLL-LGLGSGISFALGTVLYKRLVKKEGPELLQFTG-WVLLLGALLLL-PF-------AWFLGPNPQALS  188 (260)
T ss_pred             --H------HHHH-HHHHHHHHHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHHHHH-HH-------HHhcCCCCCcch
Confidence              0      1111 11111111 11 11111111 12211112221 11112211111 10       011221212234


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650          214 DTWF-FMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT  290 (352)
Q Consensus       214 ~~y~-~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv  290 (352)
                      ..|. ++...+.+........++++++.+++.+..+.+ ..++++++.+.++++|..+  +    ....|.++++.|+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~~~--~----~~~~G~~li~~g~  259 (260)
T TIGR00950       189 LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGETLS--L----PQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHhc
Confidence            4443 233344443444466789999999988888876 5788999999999999544  4    3456666666664

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.03  E-value=1.3e-07  Score=92.80  Aligned_cols=231  Identities=15%  Similarity=0.249  Sum_probs=130.6

Q ss_pred             ccccchhHHHHH--HHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeee
Q 018650           49 TYLLEPLWWVGM--AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (352)
Q Consensus        49 ~~l~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~  126 (352)
                      +.+++|+|.-=+  ++++.|......||.+-+++-+|=+.+.+++++++++.++||||.++.+++|+.+|++|+++++..
T Consensus        73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            345566554322  344678888899999999999999999999999999999999999999999999999998887654


Q ss_pred             cCCCCCC--CCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh-cc-cCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018650          127 APQESPI--TSVQEIWSLATQPAFLLYVASVIVLVFILIFHF-AP-RCGNTNALVFIGICSLMGSLSVMSVKALGTSLKL  202 (352)
Q Consensus       127 ~p~~~~~--~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~-~~-r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~  202 (352)
                      .-..++.  ...+.+..    . .++    ....++..+.-. .+ ...+.+...+.+.-|++|.+-. ......   -+
T Consensus       153 D~~~~~~~~~~~~~i~G----D-ll~----l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~-~iq~~i---le  219 (334)
T PF06027_consen  153 DVLSGSDSSSGSNPILG----D-LLA----LLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIIS-GIQLAI---LE  219 (334)
T ss_pred             cccccccCCCCCccchh----H-HHH----HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH-HHHHHh---ee
Confidence            3211111  01111111    0 111    111111111111 11 1112223344444444443211 111111   00


Q ss_pred             hhcCCccc-cchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018650          203 TFEGKNQL-LYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC  281 (352)
Q Consensus       203 ~~~g~~~~-~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~  281 (352)
                       .++...+ .++.....++....+...=-...+-.++..+|+.+.--. ..-...+++.++.+|++..+  +    ....
T Consensus       220 -~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~f~~~~~--~----ly~~  291 (334)
T PF06027_consen  220 -RSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFFFGYKFS--W----LYIL  291 (334)
T ss_pred             -hhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHhcCcccc--H----HHHH
Confidence             1111111 133333333333333332222345567778776444332 33446689999999999543  3    5778


Q ss_pred             HHHHHHHHHhhhccCCCCC
Q 018650          282 GFVVVLSGTILLHTTKDFE  300 (352)
Q Consensus       282 G~~lii~Gv~lLs~~~~~~  300 (352)
                      |+++++.|.++-...+.++
T Consensus       292 af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  292 AFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHHhheEEccCCcc
Confidence            9999999998887665433

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.03  E-value=9.9e-08  Score=94.60  Aligned_cols=217  Identities=10%  Similarity=0.178  Sum_probs=120.2

Q ss_pred             HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHH------hcCcCCccchhhHHHHhhhhheeeeec-CCCCC-----CC
Q 018650           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFI------LHEKLPQLGILGCVMCIAGSIIIVIHA-PQESP-----IT  134 (352)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~------L~E~~~~~~~~G~~li~~G~~~~v~~~-p~~~~-----~~  134 (352)
                      ..+.+.++.+.|.+...=+.....++++++++++      +|||+++++++|++++++|+.++.... +....     ..
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~  171 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL  171 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence            3467889999999999999999999999999999      699999999999999999998765322 21000     00


Q ss_pred             CHHHHH--HHhcChhHHHHHHHHHHH-HHHHHH-----hhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC
Q 018650          135 SVQEIW--SLATQPAFLLYVASVIVL-VFILIF-----HFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG  206 (352)
Q Consensus       135 t~~el~--~~~~~p~fl~y~~~~~~~-~~~l~~-----~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g  206 (352)
                      +..+..  ....+...+.-..+.+.. ++.-.+     +..++++..  ..+....+++++......   +. +   .++
T Consensus       172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~--~~~t~~~~~~~~~~~~~~---~l-~---~~~  242 (358)
T PLN00411        172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAA--FTVSFLYTVCVSIVTSMI---GL-V---VEK  242 (358)
T ss_pred             cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--hHHHHHHHHHHHHHHHHH---HH-H---Hcc
Confidence            000000  000000011111111111 111111     111222221  122222222222221111   00 1   111


Q ss_pred             C--cc-ccc--hHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018650          207 K--NQ-LLY--PDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC  281 (352)
Q Consensus       207 ~--~~-~~~--~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~  281 (352)
                      .  .. ..+  +..+.++..++.+.+ -..+.|+++++-+++.+.... -..++++++.|+++++|..+.      ..++
T Consensus       243 ~~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~as~~~-~L~PV~a~llg~l~LgE~lt~------~~~i  314 (358)
T PLN00411        243 NNPSVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYLAIFK-PLSILIAVVMGAIFLNDSLYL------GCLI  314 (358)
T ss_pred             CCcccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHHHHHH-hHHHHHHHHHHHHHhCCCCcH------HHHH
Confidence            1  11 111  122222222233333 335689999999988665554 457899999999999996553      5668


Q ss_pred             HHHHHHHHHhhhccCCCCC
Q 018650          282 GFVVVLSGTILLHTTKDFE  300 (352)
Q Consensus       282 G~~lii~Gv~lLs~~~~~~  300 (352)
                      |.++++.|+++..+.+.+|
T Consensus       315 G~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        315 GGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHHhhhhhh
Confidence            8899999998887766555

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.95  E-value=5.5e-07  Score=86.54  Aligned_cols=260  Identities=13%  Similarity=0.140  Sum_probs=135.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--CcccCC--------cccccccc---hhHHHHHHHHHHHHHHHHHHHhh
Q 018650           10 GFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRAGV--------GGFTYLLE---PLWWVGMAIMIVGEVANFVAYAF   76 (352)
Q Consensus        10 Gv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~~~--------~~~~~l~~---p~W~~G~~l~~~g~~~~~~Al~~   76 (352)
                      +.++++.++++-+..+...|.+....+...  ..|-.-        ..++-.++   +....|.+.+.....+.+.++.+
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            455677777777777777776554321110  001000        00011111   12233333333444455555544


Q ss_pred             ----chhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHh-cCh-hHHH
Q 018650           77 ----APAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLA-TQP-AFLL  150 (352)
Q Consensus        77 ----ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~-~~p-~fl~  150 (352)
                          .|.+...-+..+..++..++++.++|||+++++|.|+++..+|++++....+  +  .+.++.+... .++ +.+ 
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~--~--~~~~~~~~~~~~~~~G~~-  159 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN--G--LSLAELINNIASNPLSYG-  159 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc--c--chhhhhhhccccChHHHH-
Confidence                3555666778889999999999999999999999999999999988763221  1  0111110000 001 111 


Q ss_pred             HHHHHHHHHHHHHH-hhcccCCC-cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC-CccccchHHHHHHHH-HHHHH
Q 018650          151 YVASVIVLVFILIF-HFAPRCGN-TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG-KNQLLYPDTWFFMLV-VAICV  226 (352)
Q Consensus       151 y~~~~~~~~~~l~~-~~~~r~g~-~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g-~~~~~~~~~y~~l~~-~v~~~  226 (352)
                      +  ......+...+ ...+|..+ .+...+...   .++.... .   ..    ..++ ...-.++..|..+.. .+.+.
T Consensus       160 ~--~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~l~-~---~~----~~~~~~~~~~~~~~~~~l~~~~~~t~  226 (295)
T PRK11689        160 L--AFIGAFIWAAYCNVTRKYARGKNGITLFFI---LTALALW-I---KY----FLSPQPAMVFSLPAIIKLLLAAAAMG  226 (295)
T ss_pred             H--HHHHHHHHHHHHHHHhhccCCCCchhHHHH---HHHHHHH-H---HH----HHhcCccccCCHHHHHHHHHHHHHHH
Confidence            1  11111111111 12233221 122221111   1111111 0   00    0111 111123444433322 23344


Q ss_pred             HHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhcc
Q 018650          227 IMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHT  295 (352)
Q Consensus       227 l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~  295 (352)
                      +.+ .+.|+++++.+++.+.+..|. .++++++.|+++++|..+.      ...+|.++++.|+++...
T Consensus       227 ~~~-~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        227 FGY-AAWNVGILHGNMTLLATASYF-TPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHH-HHHHHHHHccCHHHHHHHHHh-HHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence            444 667999999999877777655 7899999999999996553      566788888888866543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.90  E-value=2.8e-07  Score=88.38  Aligned_cols=211  Identities=11%  Similarity=0.073  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHHH-hhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650           58 VGMAIMIVGEVANFVAY-AFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (352)
Q Consensus        58 ~G~~l~~~g~~~~~~Al-~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~  136 (352)
                      .|......+..+.+.+. ...|.+...-+..+..++..+++++ +|||+++++|.|.++.++|+.++..  +++.+....
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~~  150 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--CcccccchH
Confidence            45554455566677777 8889899999999999999999975 7999999999999999999887642  211111011


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHH-hhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC-CccccchH
Q 018650          137 QEIWSLATQPAFLLYVASVIVLVFILIF-HFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG-KNQLLYPD  214 (352)
Q Consensus       137 ~el~~~~~~p~fl~y~~~~~~~~~~l~~-~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g-~~~~~~~~  214 (352)
                      .+          + +...  ...+...+ ...+|..+++..........+++......   .. .   .++ .....++.
T Consensus       151 G~----------l-~~l~--a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~---~~~~~~~~~~~~  210 (292)
T PRK11272        151 GA----------I-LILI--ASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIA---SL-L---SGERLTALPTLS  210 (292)
T ss_pred             HH----------H-HHHH--HHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHH---HH-H---cCCcccccCCHH
Confidence            11          1 1111  11111111 12333332221111111111222111100   00 0   111 11222344


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650          215 TWFF-MLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  293 (352)
Q Consensus       215 ~y~~-l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL  293 (352)
                      .|.. +...+.+........++++++.+++.+..+. ...++++++.|.++++|..+  +    ....|.++++.|++++
T Consensus       211 ~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~-~l~Pi~a~i~~~~~l~E~~t--~----~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        211 GFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYA-YVNPVVAVLLGTGLGGETLS--P----IEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHHHHHHHcCCCCc--H----HHHHHHHHHHHHHHHH
Confidence            4433 3334444555567789999999988777765 45889999999999999644  3    4678888999999888


Q ss_pred             ccCCC
Q 018650          294 HTTKD  298 (352)
Q Consensus       294 s~~~~  298 (352)
                      +..+.
T Consensus       284 ~~~~~  288 (292)
T PRK11272        284 TLGKY  288 (292)
T ss_pred             HHHHh
Confidence            76443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.89  E-value=1.4e-06  Score=83.61  Aligned_cols=257  Identities=13%  Similarity=0.109  Sum_probs=144.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--CC--------cccccccchhH----HHHHHHHHHHHHH
Q 018650            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--GV--------GGFTYLLEPLW----WVGMAIMIVGEVA   69 (352)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~--~~--------~~~~~l~~p~W----~~G~~l~~~g~~~   69 (352)
                      +...|+.+.+++.++.+.+.++-|.+....+...  ..|-  +.        ..+.-.++..|    +.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            4567899999999999999999998765422110  0000  00        00001122222    55553 4566677


Q ss_pred             HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHH
Q 018650           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFL  149 (352)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl  149 (352)
                      .+.++...|.+...-+.....++..++++    |+.+  ++.+..+.++|+.++...+.+.+. .+   .+      +.+
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~-~~---~~------G~l  151 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSH-VD---LT------GAA  151 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCccc-CC---hH------HHH
Confidence            88899999999888888888888877763    5543  456777888898876532221111 11   10      111


Q ss_pred             HHHHHHHHHHHHHHHh-hcccCCCc-chHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHH-HHHHHHHH
Q 018650          150 LYVASVIVLVFILIFH-FAPRCGNT-NALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFF-MLVVAICV  226 (352)
Q Consensus       150 ~y~~~~~~~~~~l~~~-~~~r~g~~-~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~-l~~~v~~~  226 (352)
                      .-+.   ..++...+. ..++..++ ..... ....++++.-.. .  +.  .   ..+.....++..|.. +..++.+.
T Consensus       152 l~l~---aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~-~--~~--~---~~~~~~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        152 LALG---AGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFV-P--IG--A---LQAGEALWHWSILPLGLAVAILST  219 (293)
T ss_pred             HHHH---HHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHH-H--HH--H---HccCcccCCHHHHHHHHHHHHHHH
Confidence            1111   111111111 11222111 11111 222222221111 0  00  0   111112234444432 34556677


Q ss_pred             HHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          227 IMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       227 l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      ..+....|+++++.+++.+.++.+ ..++++++.|+++|||..+  +    ...+|.+++++|++...+.+.
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~-l~Pv~a~l~~~l~lgE~~~--~----~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMS-MEPALAAVSGMIFLGETLT--L----IQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHH-hHHHHHHHHHHHHhCCCCc--H----HHHHHHHHHHHHHHHHHhcCC
Confidence            777788899999999987777765 5889999999999999755  3    456777888888887765543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.87  E-value=1.7e-08  Score=83.86  Aligned_cols=103  Identities=17%  Similarity=0.275  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHH--HHHHHHHHHHHHHHhhchhHHHhhhhhHH
Q 018650           12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM--AIMIVGEVANFVAYAFAPAVLVTPLGALS   89 (352)
Q Consensus        12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl~a~~   89 (352)
                      +.-+++.++...|++..|++.+..+..   +      + ..++.++.+.  ..+.++..++..++...|+++.+|+.+++
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~~~~~~---~------~-~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~   73 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATRPVAIG---K------R-RKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLN   73 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcc---h------h-hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Confidence            345566778888999999974332111   0      0 1123445554  66778999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           90 IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        90 lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      ++++.+++.+++|||++.++++|+++++.|++++.
T Consensus        74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.83  E-value=6.2e-07  Score=86.17  Aligned_cols=223  Identities=16%  Similarity=0.130  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650           57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV  136 (352)
Q Consensus        57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~  136 (352)
                      ..|+. +++...++..++.+.+.+..+=+.++..+++++++++++|||++++++.|.+++++|+.+..   ..+.+. +.
T Consensus        70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~-~~  144 (302)
T TIGR00817        70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSF-NW  144 (302)
T ss_pred             HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccc-cH
Confidence            45555 46777899999999999999999999999999999999999999999999999999997642   222111 11


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHH-H-hhcc--cCCCcchHHHHHHHHhhhhHHHHH-HHHHHHHHHHhhcCCcccc
Q 018650          137 QEIWSLATQPAFLLYVASVIVLVFILI-F-HFAP--RCGNTNALVFIGICSLMGSLSVMS-VKALGTSLKLTFEGKNQLL  211 (352)
Q Consensus       137 ~el~~~~~~p~fl~y~~~~~~~~~~l~-~-~~~~--r~g~~~~~~~~~i~gllg~~tvl~-~K~v~~~l~~~~~g~~~~~  211 (352)
                               .+.+.-....+...+-.+ . +..+  +.+..+...|....+.+.-.-... ............+......
T Consensus       145 ---------~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~  215 (302)
T TIGR00817       145 ---------AGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVN  215 (302)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccC
Confidence                     111111111111011000 1 1111  222333444444333221111100 0000000000000000001


Q ss_pred             chHHHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650          212 YPDTWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT  290 (352)
Q Consensus       212 ~~~~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv  290 (352)
                      ....|... .....+........+.++++.+++...-. ....++++++.|.++++|..+  +    ...+|.++++.|+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~lt--~----~~~~G~~lil~Gv  288 (302)
T TIGR00817       216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTKIS--P----QQVFGTGIAIAGV  288 (302)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCCCc--h----hHHHHHHHHHHHH
Confidence            11123211 22222222222233468888887765555 667888999999999999654  3    4667888899999


Q ss_pred             hhhccCCCCC
Q 018650          291 ILLHTTKDFE  300 (352)
Q Consensus       291 ~lLs~~~~~~  300 (352)
                      ++-++.|.++
T Consensus       289 ~l~~~~k~~~  298 (302)
T TIGR00817       289 FLYSRVKAQK  298 (302)
T ss_pred             HHHHHHhccC
Confidence            9988776544

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.82  E-value=8.5e-07  Score=85.33  Aligned_cols=222  Identities=9%  Similarity=0.154  Sum_probs=138.3

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhchhHHHhhhhh-HHHHHHHHHHHHHhcCcCCccc----hhhHHHHhhhhheee
Q 018650           53 EPLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLGA-LSIIVSAVLAHFILHEKLPQLG----ILGCVMCIAGSIIIV  124 (352)
Q Consensus        53 ~p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~a-~~lv~~~~la~~~L~E~~~~~~----~~G~~li~~G~~~~v  124 (352)
                      ...|..|++.   ...|.+..+.|.....+++-.|+.. +.++++.+.+.+++||+.++++    ++|++++++|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            3455657776   8899999999999999999999999 9999999999999999999999    999999999988875


Q ss_pred             eecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhccc---CCCcchHHHHHHHHh-hhhHHHHHHHHHHHHH
Q 018650          125 IHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR---CGNTNALVFIGICSL-MGSLSVMSVKALGTSL  200 (352)
Q Consensus       125 ~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r---~g~~~~~~~~~i~gl-lg~~tvl~~K~v~~~l  200 (352)
                      ...+++.+.   ++...   .+.-+.+..+..  +....+...+|   ++.... .+....+. +++...... -.    
T Consensus       136 ~~~~~~~~~---~~~~~---~~~Gi~~~l~sg--~~y~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~-~~----  201 (290)
T TIGR00776       136 RSKDKSAGI---KSEFN---FKKGILLLLMST--IGYLVYVVVAKAFGVDGLSV-LLPQAIGMVIGGIIFNLG-HI----  201 (290)
T ss_pred             ecccccccc---ccccc---hhhHHHHHHHHH--HHHHHHHHHHHHcCCCccee-hhHHHHHHHHHHHHHHHH-Hh----
Confidence            443222110   00000   011222222221  11111222222   222221 11122222 333322211 10    


Q ss_pred             HHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650          201 KLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI  280 (352)
Q Consensus       201 ~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~  280 (352)
                      +   .  ..+.....|..+..++.. ..+..+...++++.......++.....++.+++.|+.+|+|..  ++.++....
T Consensus       202 ~---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~  273 (290)
T TIGR00776       202 L---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAIS  273 (290)
T ss_pred             c---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhH
Confidence            0   0  112222334333344444 5555666778884444455566666679999999999999965  478888999


Q ss_pred             HHHHHHHHHHhhhccC
Q 018650          281 CGFVVVLSGTILLHTT  296 (352)
Q Consensus       281 ~G~~lii~Gv~lLs~~  296 (352)
                      +|+++++.|+++.+-.
T Consensus       274 iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       274 VGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHhcc
Confidence            9999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.82  E-value=4.9e-06  Score=77.71  Aligned_cols=212  Identities=17%  Similarity=0.280  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHH-HHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCC
Q 018650           57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAH-FILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITS  135 (352)
Q Consensus        57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~-~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t  135 (352)
                      ..|......+..+.+.++...|.+..+++.....++..+++. +++|||+++++|.|..+...|+.++......+...  
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--  151 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--
Confidence            345555667888999999999999999999999999999997 77799999999999999999998876333222111  


Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCcchHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhcCCccccchH
Q 018650          136 VQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG-ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPD  214 (352)
Q Consensus       136 ~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r~g~~~~~~~~~-i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~  214 (352)
                        ..      .+ ..+....... ..+.....++..+........ .+.. +.....        ........+....+.
T Consensus       152 --~~------~g-~~~~l~a~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~  212 (292)
T COG0697         152 --SL------LG-LLLALAAALL-WALYTALVKRLSRLGPVTLALLLQLL-LALLLL--------LLFFLSGFGAPILSR  212 (292)
T ss_pred             --HH------HH-HHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHH-HHHHHH--------HHHHhccccccCCHH
Confidence              00      11 1111111111 011111122211111111111 1111 000000        000111112122333


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650          215 TWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  293 (352)
Q Consensus       215 ~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL  293 (352)
                      .|..+ ..++.+......+.+++++..+++.+.++. ...++.+++.+.++++|..+.      ....|.++++.|+++.
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~~------~~~~G~~li~~g~~l~  285 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLSP------AQLLGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHH
Confidence            33322 233333333447788999999999888887 456677888999999997653      4556778888898887


Q ss_pred             ccC
Q 018650          294 HTT  296 (352)
Q Consensus       294 s~~  296 (352)
                      ...
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            765

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.56  E-value=2.9e-07  Score=77.70  Aligned_cols=113  Identities=26%  Similarity=0.351  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--------------CC-cccccccchhH----HHHHHHHHHHHHH
Q 018650           11 FVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--------------GV-GGFTYLLEPLW----WVGMAIMIVGEVA   69 (352)
Q Consensus        11 v~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~--------------~~-~~~~~l~~p~W----~~G~~l~~~g~~~   69 (352)
                      .+.|+.|+++.++..++-|.|.+.....-  -.|+              |. +...-...+.|    ..| +.-+++..+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl~   83 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHHH
Confidence            56789999999999999999977421110  0000              00 00000112222    234 444577889


Q ss_pred             HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      .|.|+.-+++|.|.|+-..++++..+++..+||||++..+|+|+.++++|++++.
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999999999998764

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.49  E-value=3.2e-05  Score=76.42  Aligned_cols=59  Identities=12%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             HHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      +..+...++.+.+.+..+=+-+++.+++++++++++|||++++.+.+++++++|+.+..
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34556689999999999999999999999999999999999999999999999999865

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.42  E-value=2e-06  Score=71.08  Aligned_cols=66  Identities=29%  Similarity=0.423  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650           59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (352)
Q Consensus        59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~  125 (352)
                      |.+...++..+.+.|+.++| ..+.++.+++.+++.+++..++|||+++++|.|++++.+|++++..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44555578899999999999 5899999999999999999999999999999999999999998764

>TIGR00688 rarD rarD protein

Probab=98.41  E-value=0.00013  Score=68.44  Aligned_cols=62  Identities=13%  Similarity=0.127  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      +..+..+.+.|+...|.+..+-+.....++.++++++++|||+++++|+|+++..+|++++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677899999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.39  E-value=3.5e-07  Score=76.05  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHhhHHHhhhhcCc-ccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHH
Q 018650           20 FIGSSFIIKKKGLRRAAAASGV-RAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLA   97 (352)
Q Consensus        20 ~~a~g~vlqk~~~~~~~~~~~~-~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la   97 (352)
                      +-+...-+-|||.+..++.... +.-.+...+++||.+++++++...|++..+..++-+|+|+..|+. +++++++++.+
T Consensus         7 ~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g   86 (113)
T PF10639_consen    7 LWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTG   86 (113)
T ss_pred             HhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHH
Confidence            3344555677765543322111 001124568999999999999999999999999999999999995 99999999999


Q ss_pred             HHHhcCcCCccchhhHHHHhhhhhee
Q 018650           98 HFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        98 ~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      +++-+|..+++.++|+.+++.|+.+.
T Consensus        87 ~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   87 WLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCcccchhHHHHHHHHHcCeeee
Confidence            77777777888899999999998765

Many members are annotated as potential transmembrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.37  E-value=0.00014  Score=70.13  Aligned_cols=222  Identities=16%  Similarity=0.268  Sum_probs=129.1

Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHH
Q 018650           60 MAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEI  139 (352)
Q Consensus        60 ~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el  139 (352)
                      -+++.++..++-.|+.+.|...-+=+-+..++.+++++.+++|+|.+++++++++++++|+.+......++.+..+.++.
T Consensus        71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~  150 (303)
T PF08449_consen   71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF  150 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence            35566788899999999999999999999999999999999999999999999999999999887665443332221110


Q ss_pred             -HHHhcChhHHHHHHHHHHHHHHHHH--hhcccCCCc--chHHHHHHHHhhhhH-HHHHHHHHHHHHHHhhcCCccccch
Q 018650          140 -WSLATQPAFLLYVASVIVLVFILIF--HFAPRCGNT--NALVFIGICSLMGSL-SVMSVKALGTSLKLTFEGKNQLLYP  213 (352)
Q Consensus       140 -~~~~~~p~fl~y~~~~~~~~~~l~~--~~~~r~g~~--~~~~~~~i~gllg~~-tvl~~K~v~~~l~~~~~g~~~~~~~  213 (352)
                       +..    +.++.....+.-...-.+  +..++++..  ..+.|-..-++.... .....+ -++ .....  .....||
T Consensus       151 ~~~~----G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~--~f~~~~p  222 (303)
T PF08449_consen  151 SSAL----GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI--RFISAHP  222 (303)
T ss_pred             cchh----HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH--HHHHHhH
Confidence             000    111111100000001011  122333332  334555444432221 111101 011 11000  1123577


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhh
Q 018650          214 DTWFFMLVVAIC-VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL  292 (352)
Q Consensus       214 ~~y~~l~~~v~~-~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~l  292 (352)
                      ..+..++....+ .+.| .+.+.-.+++++....-+.. .=...+++.++++|++  +.++.++    .|.++++.|+.+
T Consensus       223 ~~~~~l~~~s~~~~~g~-~~i~~~~~~~~al~~t~v~t-~Rk~~sillS~~~f~~--~~~~~~~----~G~~lv~~g~~~  294 (303)
T PF08449_consen  223 SVLLYLLLFSLTGALGQ-FFIFYLIKKFSALTTTIVTT-LRKFLSILLSVIIFGH--PLSPLQW----IGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHhcCchhhhhHHH-HHHHHHHHHHHHhcCC--cCChHHH----HHHHHhHHHHHH
Confidence            666655554444 4555 66677788888765544443 3457889999999997  4556555    555567777765


Q ss_pred             hccCC
Q 018650          293 LHTTK  297 (352)
Q Consensus       293 Ls~~~  297 (352)
                      =...+
T Consensus       295 ~~~~~  299 (303)
T PF08449_consen  295 YSYAK  299 (303)
T ss_pred             HHHhh
Confidence            44433

; GO: 0055085 transmembrane transport

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.28  E-value=8.5e-05  Score=70.78  Aligned_cols=213  Identities=16%  Similarity=0.279  Sum_probs=130.0

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhheeee
Q 018650           54 PLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSIIIVI  125 (352)
Q Consensus        54 p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~~v~  125 (352)
                      ..|+.+++.   -.+|.+.++.++.....|..-|+. +..++.|.+.+.++++|--+..++    .+.+++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            456666643   358999999999999999999998 899999999999999999988887    588899999988765


Q ss_pred             ecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHH---
Q 018650          126 HAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKL---  202 (352)
Q Consensus       126 ~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~---  202 (352)
                      ...++++.++..+..+     ..+ ..  .+..+....|...||..+.+.            .+.+.-++++..+-.   
T Consensus       123 ~~~~~~~~~~~~~~~k-----gi~-~L--l~stigy~~Y~~~~~~~~~~~------------~~~~lPqaiGm~i~a~i~  182 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK-----GIL-AL--LISTIGYWIYSVIPKAFHVSG------------WSAFLPQAIGMLIGAFIF  182 (269)
T ss_pred             ccccccccccccchhh-----HHH-HH--HHHHHHHHHHHHHHHhcCCCh------------hHhHHHHHHHHHHHHHHH
Confidence            5544443322222221     122 11  111222334555666544332            222222222221110   


Q ss_pred             -hhcCCccccchHHHHHHHHHHHHHHHHH-HHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650          203 -TFEGKNQLLYPDTWFFMLVVAICVIMQM-NYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI  280 (352)
Q Consensus       203 -~~~g~~~~~~~~~y~~l~~~v~~~l~Q~-~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~  280 (352)
                       .+. ...+.+..+|.=+..++.-.+.-+ +++.  -+.--.++.+|+-|.. .+.+.+.|..+|+|..  +..++....
T Consensus       183 ~~~~-~~~~~~k~~~~nil~G~~w~ignl~~~is--~~~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~~  256 (269)
T PF06800_consen  183 NLFS-KKPFFEKKSWKNILTGLIWGIGNLFYLIS--AQKNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYTL  256 (269)
T ss_pred             hhcc-cccccccchHHhhHHHHHHHHHHHHHHHh--HHhccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHHH
Confidence             011 223333444443333333222211 2221  1123345567777776 5778899999999976  478889999


Q ss_pred             HHHHHHHHHHhh
Q 018650          281 CGFVVVLSGTIL  292 (352)
Q Consensus       281 ~G~~lii~Gv~l  292 (352)
                      +|+++++.|.++
T Consensus       257 ~G~~Liv~G~il  268 (269)
T PF06800_consen  257 IGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHhhhc
Confidence            999999998875

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.18  E-value=1.1e-05  Score=77.59  Aligned_cols=127  Identities=17%  Similarity=0.074  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc---cCC---------cccccccch-----hHHHHHHHHHHHHHH
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR---AGV---------GGFTYLLEP-----LWWVGMAIMIVGEVA   69 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~---~~~---------~~~~~l~~p-----~W~~G~~l~~~g~~~   69 (352)
                      ..+|.++++.++++++...++.||..++.+...-..   .+.         .......++     .++.|++..+++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999999998877533211100000   000         000011121     246677777788889


Q ss_pred             HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC
Q 018650           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI  133 (352)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~  133 (352)
                      +..++...|.+.+.++..+..+++.+++.+++||+++..+++|.++++.|+.......++|++.
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~  289 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKI  289 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999988775555554443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.14  E-value=4.5e-06  Score=78.65  Aligned_cols=266  Identities=20%  Similarity=0.287  Sum_probs=151.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Cccc-CCc-----ccccccchh--------HH--HHHHHHHHHHHHH
Q 018650            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GVRA-GVG-----GFTYLLEPL--------WW--VGMAIMIVGEVAN   70 (352)
Q Consensus         8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-~~~~-~~~-----~~~~l~~p~--------W~--~G~~l~~~g~~~~   70 (352)
                      .+|++|..+| .+.+...++-++...-.+..- +.|- ..-     ..-|.+.|-        |+  -|+.- ..|..+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG-~tgvmlm  114 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMG-FTGVMLM  114 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhh-hhHHHHH
Confidence            3578888888 788888888777654333211 1110 000     012233332        22  22221 2566788


Q ss_pred             HHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee----eecCCCCCCCCHHHHHHHhcCh
Q 018650           71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV----IHAPQESPITSVQEIWSLATQP  146 (352)
Q Consensus        71 ~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v----~~~p~~~~~~t~~el~~~~~~p  146 (352)
                      +.||.+.|++-..=+...+.+++.++|+.+||||.++.|-+|+.+...|+++++    +|+.+++...+. +  .-+..|
T Consensus       115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s-~--~~~~~~  191 (346)
T KOG4510|consen  115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS-Q--VEYDIP  191 (346)
T ss_pred             HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc-c--ccccCC
Confidence            999999999988888999999999999999999999999999999999999886    233222221111 1  122344


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcccCCCc-c---hHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccc-h-HHHHHHH
Q 018650          147 AFLLYVASVIVLVFILIFHFAPRCGNT-N---ALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLY-P-DTWFFML  220 (352)
Q Consensus       147 ~fl~y~~~~~~~~~~l~~~~~~r~g~~-~---~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~-~-~~y~~l~  220 (352)
                      ...+-...++....+  |...+..|++ |   -+.|-+.-+++.++-..+  .         -|.-|+.| + +-|+++.
T Consensus       192 gt~aai~s~lf~asv--yIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~--~---------ig~~~lP~cgkdr~l~~~  258 (346)
T KOG4510|consen  192 GTVAAISSVLFGASV--YIILRYIGKNAHAIMSVSYFSLITLVVSLIGCA--S---------IGAVQLPHCGKDRWLFVN  258 (346)
T ss_pred             chHHHHHhHhhhhhH--HHHHHHhhccccEEEEehHHHHHHHHHHHHHHh--h---------ccceecCccccceEEEEE
Confidence            433222222222222  1111222222 1   123333222222111110  0         11112222 2 2244555


Q ss_pred             HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 018650          221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF  299 (352)
Q Consensus       221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~  299 (352)
                      .++.+.+.| .++.+++|.=.|-.+. ++.+...+++.+--+++|+||.+  .|    -.+|.+.++..++..+..|..
T Consensus       259 lGvfgfigQ-IllTm~lQiErAGpva-im~~~dvvfAf~wqv~ff~~~Pt--~w----s~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  259 LGVFGFIGQ-ILLTMGLQIERAGPVA-IMTYTDVVFAFFWQVLFFGHWPT--IW----SWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             ehhhhhHHH-HHHHHHhhhhccCCee-hhhHHHHHHHHHHHHHHhcCCCh--HH----HhhceeeeehhHHHHHHHHHh
Confidence            677777887 7899999977665443 44556678899999999999976  33    446666666666665555543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.11  E-value=2.9e-05  Score=65.40  Aligned_cols=74  Identities=14%  Similarity=0.199  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (352)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~  129 (352)
                      |+..++++++++.+...|+...|+++.+|+- +++.+...+.+.+++||+++..+++|+.++++|++.+-..+++
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence            5677778889999999999999999999994 7999999999999999999999999999999999887544443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.09  E-value=5.1e-05  Score=63.01  Aligned_cols=95  Identities=13%  Similarity=0.111  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhH-HHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhHHHHHH
Q 018650           16 LSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLW-WVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSIIVS   93 (352)
Q Consensus        16 ~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W-~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~lv~~   93 (352)
                      ++.++-..|....|++    +   +          +++|.| +..++++++++.+...|+...|+++.+|+ .+++.+.+
T Consensus         9 ~a~~~Ev~~~~~lK~s----~---g----------f~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~   71 (110)
T PRK09541          9 GAILAEVIGTTLMKFS----E---G----------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI   71 (110)
T ss_pred             HHHHHHHHHHHHHHHh----c---C----------CCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Confidence            3455666666666654    1   0          234555 45556667888888999999999999999 67999999


Q ss_pred             HHHHHHHhcCcCCccchhhHHHHhhhhheeeeec
Q 018650           94 AVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA  127 (352)
Q Consensus        94 ~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~  127 (352)
                      .+.+.+++||+++..+++|..++++|++++-..+
T Consensus        72 ~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         72 SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999875444

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.08  E-value=0.00038  Score=68.68  Aligned_cols=121  Identities=17%  Similarity=0.197  Sum_probs=86.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhh--------------------hhcCcccCCccccccc---chhHHHH
Q 018650            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAA--------------------AASGVRAGVGGFTYLL---EPLWWVG   59 (352)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~--------------------~~~~~~~~~~~~~~l~---~p~W~~G   59 (352)
                      |+++..+|++..+++.++.+.=.+=+||. +.=+                    ..-..+   ....+++   ...|..+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHH
Confidence            56788999999999999999988888882 2111                    000011   1112222   2345555


Q ss_pred             H---HHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcC---Cc----cchhhHHHHhhhhheeeeec
Q 018650           60 M---AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKL---PQ----LGILGCVMCIAGSIIIVIHA  127 (352)
Q Consensus        60 ~---~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~---~~----~~~~G~~li~~G~~~~v~~~  127 (352)
                      +   ++-.+|.+.++.+..+...|+-.|+. ++.++++.++...+++|=-   +.    ...+|++++++|+.+....+
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            5   34457999999999999999999996 6788999999999998643   33    34489999999999886644

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.96  E-value=0.00081  Score=63.40  Aligned_cols=71  Identities=17%  Similarity=0.338  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650           58 VGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP  128 (352)
Q Consensus        58 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p  128 (352)
                      +=-++|.+...+.++++...+.+.-|=+...-++++++++.++||+|+++++|++..+.++|++++-....
T Consensus        22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34478899999999999999999999999999999999999999999999999999999999998765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.90  E-value=9.9e-05  Score=68.72  Aligned_cols=116  Identities=17%  Similarity=0.196  Sum_probs=86.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Ccc---c------------CCcccccccchhH----HHHHHHHH
Q 018650            5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GVR---A------------GVGGFTYLLEPLW----WVGMAIMI   64 (352)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-~~~---~------------~~~~~~~l~~p~W----~~G~~l~~   64 (352)
                      +....|..++++++++.+...++.|+..++.+... ...   .            ..+.........|    +.|.+..+
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTA  203 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHH
Confidence            34568999999999999999999999754422100 000   0            0000011112223    24444556


Q ss_pred             HHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhh
Q 018650           65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS  120 (352)
Q Consensus        65 ~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~  120 (352)
                      ++..+++.++...|.+.+..+..+..+++.+++.+++||+++..++.|+++++.|+
T Consensus       204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            78889999999999999999999999999999999999999999999999999986

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.77  E-value=0.00015  Score=71.95  Aligned_cols=119  Identities=17%  Similarity=0.208  Sum_probs=84.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------------cc-cCCcccccc--cchhHHHHHHH---
Q 018650            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------------VR-AGVGGFTYL--LEPLWWVGMAI---   62 (352)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-----------------~~-~~~~~~~~l--~~p~W~~G~~l---   62 (352)
                      ++.+|.++++.|+++.+...++||+-.++-+....                 .- .+.......  .++ ++..++.   
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i  264 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAI  264 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHH
Confidence            35779999999999999999999986544211100                 00 000000000  011 1112221   


Q ss_pred             -HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650           63 -MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (352)
Q Consensus        63 -~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~  125 (352)
                       ..++..+|..++...+.+.+..+.-+..+++++++..+|+|+++..+++|+++++.|+.+...
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence             124667788889999999999999999999999999999999999999999999999988654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.76  E-value=0.00049  Score=57.06  Aligned_cols=100  Identities=14%  Similarity=0.077  Sum_probs=76.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHH-HHHHHHHHHHHhhchhHHHhhh
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIM-IVGEVANFVAYAFAPAVLVTPL   85 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~-~~g~~~~~~Al~~ap~slv~Pl   85 (352)
                      +...-+.-+++.++--.|....|++    +             -+++|.|.+.++.. ++++.+--.|+...|.++..++
T Consensus         5 ~~~~~~~L~~Ai~~Ev~~t~~Lk~s----~-------------gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAv   67 (109)
T PRK10650          5 EWIHAAWLALAIVLEIVANIFLKFS----D-------------GFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYAL   67 (109)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh----c-------------CCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHH
Confidence            3444444455666666777666653    1             14466665555444 5677777888899999999998


Q ss_pred             hh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650           86 GA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        86 ~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      -+ ++.+...+.+.++.||+++..++.|..+++.|++.+
T Consensus        68 W~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         68 WGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            65 899999999999999999999999999999998864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.74  E-value=0.00024  Score=57.09  Aligned_cols=85  Identities=16%  Similarity=0.040  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhchhHHHhhhh-hHHHHH
Q 018650           15 LLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLG-ALSIIV   92 (352)
Q Consensus        15 l~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~   92 (352)
                      +++.++...+....|++.                 -.+++.|..+.+ +++++..+...|+...|+++..|+- +++.+.
T Consensus         7 ~~a~~~ev~~~~~lK~s~-----------------g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~   69 (93)
T PF00893_consen    7 LLAILFEVVGTIALKASH-----------------GFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVG   69 (93)
T ss_dssp             HHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-----------------hhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence            344455666777777621                 133445555544 6678889999999999999999985 599999


Q ss_pred             HHHHHHHHhcCcCCccchhhHHHH
Q 018650           93 SAVLAHFILHEKLPQLGILGCVMC  116 (352)
Q Consensus        93 ~~~la~~~L~E~~~~~~~~G~~li  116 (352)
                      ..+.+.++.||+++..+++|+.++
T Consensus        70 ~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   70 VTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHhCCCCCHHHHhheeeC
Confidence            999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.68  E-value=5.1e-05  Score=61.89  Aligned_cols=69  Identities=25%  Similarity=0.396  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      ...|.+...++..+...++...|.+.++++..+..+++.+++..++||+++++++.|+++++.|+.++.
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            345555557888999999999999999999999999999999999999999999999999999987653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.66  E-value=0.00025  Score=68.12  Aligned_cols=116  Identities=20%  Similarity=0.159  Sum_probs=84.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc---C---------Ccccccccch-hH----HHHHHHHHHHHHH
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA---G---------VGGFTYLLEP-LW----WVGMAIMIVGEVA   69 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~---~---------~~~~~~l~~p-~W----~~G~~l~~~g~~~   69 (352)
                      ...|.++++.++++.+.+.++.||-.++.+.. ....   +         .+....-.++ .|    +.| +..+++..+
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l  231 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGI-TLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAA  231 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCch-hHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHH
Confidence            35699999999999999999999843221100 0000   0         0000011112 22    222 233567788


Q ss_pred             HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      +..++...|.+.+.++..+..+++.+++..++||+++..+++|+++++.|+.+..
T Consensus       232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            9999999999999999999999999999999999999999999999999987653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.62  E-value=0.00034  Score=67.04  Aligned_cols=118  Identities=15%  Similarity=0.129  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC---------------cccCCcccccccc-hhH----HHHHHHHHH
Q 018650            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG---------------VRAGVGGFTYLLE-PLW----WVGMAIMIV   65 (352)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~---------------~~~~~~~~~~l~~-p~W----~~G~~l~~~   65 (352)
                      .+..|.++++.++++++.+.+..||..++.+....               ...+. ......+ ..|    +.|+...++
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHH
Confidence            34679999999999999999998884322110000               00000 0001011 123    234445567


Q ss_pred             HHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        66 g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      +..++..++...|.+.+..+..+..+++++++.+++||+++..+++|+++++.|+.+..
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.49  E-value=0.0024  Score=52.99  Aligned_cols=80  Identities=15%  Similarity=0.272  Sum_probs=60.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650          210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG  289 (352)
Q Consensus       210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G  289 (352)
                      +.+|.........+.+...-..++..++++-|.++.+|+.+ .-.+.+.+.|..+|+|..+  +    .-.+|..++++|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~ls--~----~~~~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEPVS--P----RHWCGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHH
Confidence            34554333333444555556688899999999999999999 6668889999999999655  4    456788899999


Q ss_pred             HhhhccC
Q 018650          290 TILLHTT  296 (352)
Q Consensus       290 v~lLs~~  296 (352)
                      +++++++
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            9998865

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.44  E-value=0.0019  Score=53.23  Aligned_cols=72  Identities=17%  Similarity=0.072  Sum_probs=61.2

Q ss_pred             cchhHHHHH-HHHHHHHHHHHHHHhhchhHHHhhhhh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650           52 LEPLWWVGM-AIMIVGEVANFVAYAFAPAVLVTPLGA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        52 ~~p~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      +++.|++.+ +++.+++.+-..|+...|.++..++-+ ++.+.+.+.+.++.||+++..+++|+.+++.|++.+
T Consensus        27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            355554444 455677778888899999999999866 999999999999999999999999999999999876

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.40  E-value=0.0013  Score=63.21  Aligned_cols=117  Identities=24%  Similarity=0.295  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc--c-----C----------Ccccc------cccchh-H----HH
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR--A-----G----------VGGFT------YLLEPL-W----WV   58 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~--~-----~----------~~~~~------~l~~p~-W----~~   58 (352)
                      ...|.++++.++++.+...+++|+-.++.+......  .     +          .+...      .-.++. |    +.
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            357999999999999999999998533211100000  0     0          00000      001122 2    23


Q ss_pred             HHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650           59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      |++..+++..+++.++...+...+.++..+..+++.+++.+++||+++..+++|.+++++|+.+.
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            44555677778888888889999999999999999999999999999999999999999998764

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.38  E-value=0.0014  Score=55.63  Aligned_cols=76  Identities=20%  Similarity=0.322  Sum_probs=53.5

Q ss_pred             chHHHHHHHH-HHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650          212 YPDTWFFMLV-VAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT  290 (352)
Q Consensus       212 ~~~~y~~l~~-~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv  290 (352)
                      .+..|.+++. ++.+.+.. .+.=+||+.++++.|+|+--. ...++++.++++++|..+.      -...|++++.+|+
T Consensus        63 ~~k~~lflilSGla~glsw-l~Yf~ALk~G~as~VvPldk~-svvl~~lls~lfL~E~ls~------~~~iG~~LI~~Ga  134 (140)
T COG2510          63 GPKSWLFLILSGLAGGLSW-LLYFRALKKGKASRVVPLDKT-SVVLAVLLSILFLGERLSL------PTWIGIVLIVIGA  134 (140)
T ss_pred             CcceehhhhHHHHHHHHHH-HHHHHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcCCCCH------HHHHHHHHHHhCe
Confidence            4444444333 33343333 233389999999999998643 4467889999999996654      3558899999999


Q ss_pred             hhhcc
Q 018650          291 ILLHT  295 (352)
Q Consensus       291 ~lLs~  295 (352)
                      +++++
T Consensus       135 ilvs~  139 (140)
T COG2510         135 ILVSL  139 (140)
T ss_pred             eeEec
Confidence            99886

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.27  E-value=0.0066  Score=50.41  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650          209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS  288 (352)
Q Consensus       209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~  288 (352)
                      .|+++.+....   +++...-++++.+++++-|.++.+|+-.-.-++.+.+.|.++|||..+.      .-..|..+++.
T Consensus        26 gf~~~~~~i~~---~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~   96 (110)
T PRK09541         26 GFTRLWPSVGT---IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICA   96 (110)
T ss_pred             CCCchhHHHHH---HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHH
Confidence            36777776643   3444555678899999999999999988777888999999999996653      56678889999


Q ss_pred             HHhhhccCC
Q 018650          289 GTILLHTTK  297 (352)
Q Consensus       289 Gv~lLs~~~  297 (352)
                      |++++...+
T Consensus        97 GVi~l~l~~  105 (110)
T PRK09541         97 GVLVINLLS  105 (110)
T ss_pred             HHHHHhcCC
Confidence            999996544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.19  E-value=0.063  Score=52.85  Aligned_cols=70  Identities=23%  Similarity=0.254  Sum_probs=63.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           55 LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        55 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      .|-+=-++|.+-.-+++++++..|.+.-|...-+-++-++++...+|++|+++++|...++..+|+.++=
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            3444456888877799999999999999999999999999999999999999999999999999998875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.12  E-value=0.0059  Score=50.26  Aligned_cols=72  Identities=15%  Similarity=0.122  Sum_probs=60.8

Q ss_pred             cchhHHHHHH-HHHHHHHHHHHHHhhchhHHHhhh-hhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650           52 LEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        52 ~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl-~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      +|+.|.+.++ .+++.+.+-..|+...|+.+.+++ .+++.+..++.+..++||+++..+++|..++++|++.+
T Consensus        28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            3555655554 445777788888999999999987 67899999999999999999999999999999998865

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.11  E-value=0.22  Score=47.96  Aligned_cols=120  Identities=24%  Similarity=0.253  Sum_probs=79.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHh----hHHHhhhhc-------------CcccCCcccccccchhHHHHHHHHHHHH
Q 018650            5 KDNLKGFVLALLSSFFIGSSFIIKKK----GLRRAAAAS-------------GVRAGVGGFTYLLEPLWWVGMAIMIVGE   67 (352)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~g~vlqk~----~~~~~~~~~-------------~~~~~~~~~~~l~~p~W~~G~~l~~~g~   67 (352)
                      .+.--|+++++.+.++-+.--...|.    +..+.-.+.             -.|.-.+.++..++|+=+....+..+=.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            44556899999998887766655554    111100000             0000012345678887777777776666


Q ss_pred             HHHHHHHhhchhH---HHhhhhh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           68 VANFVAYAFAPAV---LVTPLGA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        68 ~~~~~Al~~ap~s---lv~Pl~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      ..|..-+.++|-+   +=+.+|- +..++|.++++.++|||+++.+|+++.+..+|+....
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~  143 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT  143 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence            7888888887765   3333332 3456789999999999999999999999999988643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.10  E-value=0.00066  Score=64.65  Aligned_cols=115  Identities=17%  Similarity=0.141  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc---c-----C-C---------ccccc-ccchhH----HHHHHHHH
Q 018650            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR---A-----G-V---------GGFTY-LLEPLW----WVGMAIMI   64 (352)
Q Consensus         8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~---~-----~-~---------~~~~~-l~~p~W----~~G~~l~~   64 (352)
                      ..|..+++.++++.+.+.++.|+...+.+.....-   .     . .         +.... ...+.|    +.+.+...
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence            45778899999999999988887532211100000   0     0 0         00000 011112    23444455


Q ss_pred             HHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650           65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII  122 (352)
Q Consensus        65 ~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~  122 (352)
                      ++..+++.+++..|.+.+.++..++.+++.+++.+++||+++..+++|.+++++|+.+
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            7788899999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.06  E-value=0.0096  Score=50.80  Aligned_cols=71  Identities=15%  Similarity=0.177  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHH--HHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASV--IMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~--i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      .++++......+++.++++.|.++.+|+....+.. ..+.+.  ++|+|..+.      ...+|.+++++|++++++.++
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~-v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYAL-VYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhccCCC
Confidence            55566667778899999999999999998877633 333444  489996553      567899999999999987655

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.02  E-value=0.014  Score=48.00  Aligned_cols=79  Identities=9%  Similarity=0.184  Sum_probs=62.8

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650          209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS  288 (352)
Q Consensus       209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~  288 (352)
                      .|+++.++++.   +++...-.+++.+++|.-|..+.+++-.-.=+..+.+.|.++|+|..+  +    ...+|..+++.
T Consensus        25 gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~--~----~~~~gi~lIi~   95 (105)
T PRK11431         25 GFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS--P----ARLLSLALIVA   95 (105)
T ss_pred             CCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHH
Confidence            47788777754   334455568899999999999998888888888999999999999665  3    45678889999


Q ss_pred             HHhhhccC
Q 018650          289 GTILLHTT  296 (352)
Q Consensus       289 Gv~lLs~~  296 (352)
                      |++.+...
T Consensus        96 GVv~l~l~  103 (105)
T PRK11431         96 GIIGLKLS  103 (105)
T ss_pred             HHHhhhcc
Confidence            99988544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.96  E-value=0.018  Score=48.53  Aligned_cols=71  Identities=15%  Similarity=0.294  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          222 VAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       222 ~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      .+++...-++++.++++.-|.++.+|+..-.-++.+.+.|.++|+|..+.      .-.+|..+++.|++++....+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhhcCCC
Confidence            34445555788999999999999999987778888999999999996653      566888899999999865543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.94  E-value=0.0048  Score=57.47  Aligned_cols=117  Identities=21%  Similarity=0.222  Sum_probs=84.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc------cC--------Cccc-c-cccchhH--HHHHHHHHHHHH
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR------AG--------VGGF-T-YLLEPLW--WVGMAIMIVGEV   68 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~------~~--------~~~~-~-~l~~p~W--~~G~~l~~~g~~   68 (352)
                      ...|+.+++.++++.+...++.|+-. +........      ..        .... + ..+...+  +.|++...++..
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~  230 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYL  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            36899999999999999999998643 111000000      00        0000 0 1111111  234444446788


Q ss_pred             HHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           69 ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        69 ~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      +++.++...|...++++..+..+++.+++..+++|+++..+++|+++++.|+.+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999988764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.75  E-value=0.028  Score=46.29  Aligned_cols=78  Identities=19%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650          210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG  289 (352)
Q Consensus       210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G  289 (352)
                      |+.+.++++   .+++...-.+++.+|+|+-|..+.+++-.-.=+..+.+.|+++|+|..+.      .-..|..++++|
T Consensus        27 f~~~~~~il---~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaG   97 (106)
T COG2076          27 FTRLWPSIL---TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAG   97 (106)
T ss_pred             ccccchHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHH
Confidence            556655554   23344555678999999999999999998888999999999999996653      566788899999


Q ss_pred             HhhhccC
Q 018650          290 TILLHTT  296 (352)
Q Consensus       290 v~lLs~~  296 (352)
                      ++.|...
T Consensus        98 vi~Lk~~  104 (106)
T COG2076          98 VIGLKLG  104 (106)
T ss_pred             HHHhhhc
Confidence            9988654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.72  E-value=0.03  Score=46.44  Aligned_cols=77  Identities=16%  Similarity=0.206  Sum_probs=60.9

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650          209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS  288 (352)
Q Consensus       209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~  288 (352)
                      .|++|.+.+..   +++...-.+++.+++|+-|..+.+|+-.-.-+..+.+.|.++|+|..+  +    ...+|..+++.
T Consensus        31 gf~~~~~~~~~---~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~--~----~~~~gi~lIi~  101 (109)
T PRK10650         31 GFRRKIYGILS---LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN--R----KGWIGLVLLLA  101 (109)
T ss_pred             CCcchHHHHHH---HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC--H----HHHHHHHHHHH
Confidence            47788776553   333444567899999999999999998888889999999999999665  3    56678888999


Q ss_pred             HHhhhc
Q 018650          289 GTILLH  294 (352)
Q Consensus       289 Gv~lLs  294 (352)
                      |++++.
T Consensus       102 GVi~lk  107 (109)
T PRK10650        102 GMVMIK  107 (109)
T ss_pred             HHHHhc
Confidence            998874

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.53  E-value=0.005  Score=59.17  Aligned_cols=62  Identities=13%  Similarity=-0.039  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650           64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (352)
Q Consensus        64 ~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~  125 (352)
                      .++..+++.+++..|.+.++++.-+..+++.+++.++++|+++..++.|+++++.|+.++..
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999999999999999999999999877654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.87  E-value=0.073  Score=42.61  Aligned_cols=63  Identities=11%  Similarity=0.083  Sum_probs=32.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Q 018650          210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASII  277 (352)
Q Consensus       210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~  277 (352)
                      ++++.+...   .+.+...-.+++.+|+|+-|.++.+|+....-+....+.|..+|+|..+  +.++.
T Consensus        26 ~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s--~~~~~   88 (93)
T PF00893_consen   26 FTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS--LSKWL   88 (93)
T ss_dssp             --------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HH
T ss_pred             hcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHh
Confidence            556555543   2334555668999999999999999999988889999999999999554  44443

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.77  E-value=0.025  Score=54.41  Aligned_cols=116  Identities=19%  Similarity=0.135  Sum_probs=83.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-ccc-----CCc--cccc-----ccchhHH----HHHHHHHHHHHH
Q 018650            7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-VRA-----GVG--GFTY-----LLEPLWW----VGMAIMIVGEVA   69 (352)
Q Consensus         7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-~~~-----~~~--~~~~-----l~~p~W~----~G~~l~~~g~~~   69 (352)
                      ...|++.+++|+++++.-...-|+.. ..+.... ...     +.-  ...+     ..++.+|    .|++ ..+++.+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~  227 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF  227 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence            36799999999999998888877531 1000000 000     000  0011     1122333    4555 4677888


Q ss_pred             HHHHHh-hchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhheee
Q 018650           70 NFVAYA-FAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSIIIV  124 (352)
Q Consensus        70 ~~~Al~-~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~~v  124 (352)
                      .+.+.. ..+.+...++.....+.+.+.+.+++||+.+++++    +|+++++.|+.++.
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            888888 99999999999999999999999999999999999    99999999988764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.60  E-value=0.11  Score=49.32  Aligned_cols=124  Identities=20%  Similarity=0.200  Sum_probs=86.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCC-------------cccccccch-hHHHHHHHHH----HH
Q 018650            5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGV-------------GGFTYLLEP-LWWVGMAIMI----VG   66 (352)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~-------------~~~~~l~~p-~W~~G~~l~~----~g   66 (352)
                      +-...|+.+|+.+..|-+.=.+.-||.-+..+...+...|.             ..-+-+.+| .-..++..-+    +=
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccc
Confidence            45678999999999998877777666432111000000000             011233444 3344444333    34


Q ss_pred             HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP  128 (352)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p  128 (352)
                      ..+..+|++..|...-.-+.++...+.++.+..+|||+++..+|+|+++++.++.-.....+
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            56889999999999999999999999999999999999999999999999999876544333

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.49  E-value=0.057  Score=53.30  Aligned_cols=127  Identities=20%  Similarity=0.295  Sum_probs=80.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-----Cc--------ccC-CcccccccchhHHHHHH-HHHHHHH
Q 018650            4 SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-----GV--------RAG-VGGFTYLLEPLWWVGMA-IMIVGEV   68 (352)
Q Consensus         4 ~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-----~~--------~~~-~~~~~~l~~p~W~~G~~-l~~~g~~   68 (352)
                      .++.++|-++++.|++++|+..++|++-.++.+...     +.        -.. .+ +.-+++-.|=.... +++...+
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHHHHHHHHH
Confidence            357799999999999999999999999766543221     00        000 00 01111111211122 2223334


Q ss_pred             HHHHHHhhchhHHHh------hh-hhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCC
Q 018650           69 ANFVAYAFAPAVLVT------PL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES  131 (352)
Q Consensus        69 ~~~~Al~~ap~slv~------Pl-~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~  131 (352)
                      +.+.-|...|..+-.      -+ ...+.+++++...++.|+++++.-++|.+++++|.++.....++++
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            566666666664421      12 2345788899999999999999999999999999888765554433

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=95.45  E-value=0.028  Score=53.96  Aligned_cols=119  Identities=17%  Similarity=0.258  Sum_probs=79.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc-------CC----------cccccc----c------c--hh
Q 018650            5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA-------GV----------GGFTYL----L------E--PL   55 (352)
Q Consensus         5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~-------~~----------~~~~~l----~------~--p~   55 (352)
                      +.+..|.++++.++++.++..++.||-.++.+.++ ...       +.          +.....    .      .  ..
T Consensus       141 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (302)
T TIGR00817       141 SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKI  219 (302)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHH
Confidence            34577999999999999999999888544111110 000       00          000000    0      0  11


Q ss_pred             HHHHHHH----HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           56 WWVGMAI----MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        56 W~~G~~l----~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      |..+...    +......++.++...+.+...-.+.+..+++.+++.++++|+++..+++|.++++.|+.+.-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            2112111    11222345567888899999999999999999999999999999999999999999987653

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.40  E-value=0.28  Score=40.17  Aligned_cols=69  Identities=20%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 018650          224 ICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE  300 (352)
Q Consensus       224 ~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~  300 (352)
                      .+...+......|+++.+ ..+.|+.+ ..++++.+.|.++|+|..+  +.    ...|.+++.+|++++..++...
T Consensus        43 ~~~~~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~er~~--~~----~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   43 LGFGVAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKERLS--PR----RWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcCCCC--HH----HHHHHHHHHHHHHHHhhhhccc
Confidence            333344566678888888 46665555 5889999999999999544  43    5567788899999988766544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=95.32  E-value=0.047  Score=44.14  Aligned_cols=67  Identities=13%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 018650          221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLH  294 (352)
Q Consensus       221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs  294 (352)
                      ..+.+......+.++|+++.+++.+.++.+ ..++++.+.|.++++|..+  +    ....|.++++.|++++.
T Consensus        59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~~--~----~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   59 LGLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERPS--W----RQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCCC--H----HHHHHHHHHHHHHHHHH
Confidence            333433444577889999999999999888 6889999999999999655  3    46677778888887653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.30  E-value=0.13  Score=43.86  Aligned_cols=113  Identities=20%  Similarity=0.338  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHh----hhhcC----------------------cccC--Cccccccc-----chhH
Q 018650           10 GFVLALLSSFFIGSSFIIKKKGLRRA----AAASG----------------------VRAG--VGGFTYLL-----EPLW   56 (352)
Q Consensus        10 Gv~LAl~ss~~~a~g~vlqk~~~~~~----~~~~~----------------------~~~~--~~~~~~l~-----~p~W   56 (352)
                      |.++++.|+++.++=.+++|+..++.    +..+.                      .+..  .......+     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999877663    11100                      0000  00000111     1122


Q ss_pred             HHHHHHH-HHH---HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650           57 WVGMAIM-IVG---EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII  122 (352)
Q Consensus        57 ~~G~~l~-~~g---~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~  122 (352)
                      +.-++.. +.+   ...++..+........+=++.+--+...+++..+++|+++..++.|++++++|+..
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            2222222 223   34455556666777777788889999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.25  E-value=0.94  Score=45.21  Aligned_cols=202  Identities=20%  Similarity=0.280  Sum_probs=111.1

Q ss_pred             HHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC-----CCHHHHHHHhcC
Q 018650           71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI-----TSVQEIWSLATQ  145 (352)
Q Consensus        71 ~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~-----~t~~el~~~~~~  145 (352)
                      =+||++-..+-.+=+.+.+=+|++.+|..+.+||++..+.+++++.+.|++++.....++...     ..+.+++.+++.
T Consensus       177 naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA  256 (416)
T KOG2765|consen  177 NAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSA  256 (416)
T ss_pred             HHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHH
Confidence            357888888888899999999999999999999999999999999999999887765433222     233344444332


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcccCC-CcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccc---chHHHHHHHH
Q 018650          146 PAFLLYVASVIVLVFILIFHFAPRCG-NTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLL---YPDTWFFMLV  221 (352)
Q Consensus       146 p~fl~y~~~~~~~~~~l~~~~~~r~g-~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~---~~~~y~~l~~  221 (352)
                         +.|.+     -.+++-+..++.| +-.+-.+-+..|++-=+ .+ --.+   +.+..-+...|.   ..+.=.+++.
T Consensus       257 ---~~Yav-----Y~vllk~~~~~eg~rvdi~lffGfvGLfnll-ll-wP~l---~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  257 ---LLYAV-----YTVLLKRKIGDEGERVDIQLFFGFVGLFNLL-LL-WPPL---IILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             ---HHHHH-----HHHHHHhhcccccccccHHHHHHHHHHHHHH-HH-hHHH---HHHHHhccCcccCCCCceeEeeeHh
Confidence               22211     1122234455564 33444444434432210 00 0000   111111322222   2222222222


Q ss_pred             -HHHHHHHHHHHHHHhhcccCc-------cccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650          222 -VAICVIMQMNYLNKALDTFNT-------AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL  293 (352)
Q Consensus       222 -~v~~~l~Q~~~ln~aL~~~~a-------~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL  293 (352)
                       .+.+++.- ++.-+|.-..++       ++.+|+...        +-.+ .++. +.++    .+.+|...+++|-+..
T Consensus       324 ~ligtvvSD-ylW~~a~~lTs~Lv~TlgmSltIPLA~~--------aD~l-~k~~-~~S~----~~iiGsi~Ifv~Fv~v  388 (416)
T KOG2765|consen  324 NLIGTVVSD-YLWAKAVLLTSPLVVTLGMSLTIPLAMF--------ADVL-IKGK-HPSA----LYIIGSIPIFVGFVIV  388 (416)
T ss_pred             hHHHHHHHH-HHHHHHHHhccchhheeeeeEeeeHHHH--------HHHH-HcCC-CCCH----HHHHHHHHHHHHHhhe
Confidence             33344444 555666554444       455666433        3332 3332 2244    5677888888888777


Q ss_pred             ccCCCCC
Q 018650          294 HTTKDFE  300 (352)
Q Consensus       294 s~~~~~~  300 (352)
                      ....+..
T Consensus       389 n~~~~~~  395 (416)
T KOG2765|consen  389 NISSENS  395 (416)
T ss_pred             ecccccc
Confidence            7655543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.23  E-value=1.4  Score=42.65  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeee
Q 018650           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (352)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~  126 (352)
                      ...=.++.+.|..+..++|-+-.++--|-+=..-++|..+++.-+||++++.++|+|...+.+|.+.+...
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34456788999999999999999999999999999999999999999999999999999999999888654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.87  E-value=0.24  Score=47.45  Aligned_cols=86  Identities=20%  Similarity=0.219  Sum_probs=63.2

Q ss_pred             hHHHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHh
Q 018650          213 PDTWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTI  291 (352)
Q Consensus       213 ~~~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~  291 (352)
                      +..+..- +.++.-.+.| ..+=++.+.-..+...|+...+--+.+.+.|+++|+||...  .+...-.+++++++.|++
T Consensus        42 ~~~~~~~~lsG~~W~iGq-~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~  118 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQ-IGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVI  118 (269)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHH
Confidence            3444433 3344445666 44456778888899999999999999999999999999874  455555668899999999


Q ss_pred             hhccCCCCCC
Q 018650          292 LLHTTKDFER  301 (352)
Q Consensus       292 lLs~~~~~~~  301 (352)
                      +-+.+++.++
T Consensus       119 lts~~~~~~~  128 (269)
T PF06800_consen  119 LTSYQDKKSD  128 (269)
T ss_pred             Hhcccccccc
Confidence            8877666553

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=93.72  E-value=0.18  Score=49.33  Aligned_cols=61  Identities=16%  Similarity=0.265  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650           64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        64 ~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v  124 (352)
                      .+|-++.-.++...|.+.+|-+-++..+++++++.++.+|+.++..+.-.+.++.|+.+..
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias  154 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS  154 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence            4677788889999999999999999999999999999999999999999888888877653

>TIGR00803 nst UDP-galactose transporter

Probab=93.13  E-value=0.32  Score=44.55  Aligned_cols=116  Identities=16%  Similarity=0.204  Sum_probs=80.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhh------c-----------C--cccCC--cccccc--cchhHHHHHHH
Q 018650            6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAA------S-----------G--VRAGV--GGFTYL--LEPLWWVGMAI   62 (352)
Q Consensus         6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~------~-----------~--~~~~~--~~~~~l--~~p~W~~G~~l   62 (352)
                      +.+.|+.+.+.+.++-+..-+.|+++.++.+..      .           .  ..++.  ...+.+  ..+.+|.=.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            456777777778888888888888875542100      0           0  00000  001111  12333444455


Q ss_pred             HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhh
Q 018650           63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSI  121 (352)
Q Consensus        63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~  121 (352)
                      .++|..+-...+.+++.....=...+..+++.+++.++.+|+++...|.|+.++..|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            56676777777888888899999999999999999999999999999999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=91.94  E-value=0.87  Score=37.34  Aligned_cols=49  Identities=18%  Similarity=0.398  Sum_probs=40.0

Q ss_pred             HHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCC
Q 018650           81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE  130 (352)
Q Consensus        81 lv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~  130 (352)
                      +-+.-|.+-++.++.-..+.-|.++++.||.|.+.|.+|+.++ +++|..
T Consensus        60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR~  108 (109)
T COG1742          60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPRG  108 (109)
T ss_pred             HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCCC
Confidence            4456677888888888999999999999999999999996554 566653

>PRK02237 hypothetical protein; Provisional

Probab=90.93  E-value=1.3  Score=36.55  Aligned_cols=48  Identities=17%  Similarity=0.360  Sum_probs=39.7

Q ss_pred             HHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650           81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (352)
Q Consensus        81 lv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~  129 (352)
                      +-+.-|.+=++.+.+-.+.+-|+|+++.|++|..+|.+|+.++. ++|.
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAPR  108 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecCC
Confidence            34455677778888899999999999999999999999998764 5664

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=90.77  E-value=0.34  Score=39.94  Aligned_cols=77  Identities=19%  Similarity=0.330  Sum_probs=64.3

Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCC-ccchhhHHHHhhhhheee
Q 018650           47 GFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLP-QLGILGCVMCIAGSIIIV  124 (352)
Q Consensus        47 ~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~-~~~~~G~~li~~G~~~~v  124 (352)
                      .+.++.++.+|+=+++.--|..+.+.-++-+|.++.-|+. ++++.|+++++..+ +|+.. ++-+.|+.+++.|+.+.+
T Consensus        46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence            4567788899999999999999999999999999999985 67888899888765 56554 666799999999986643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=89.74  E-value=1.3  Score=37.08  Aligned_cols=52  Identities=17%  Similarity=0.229  Sum_probs=41.8

Q ss_pred             HhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhh
Q 018650          235 KALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL  292 (352)
Q Consensus       235 ~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~l  292 (352)
                      -.|.+.|-+..+|+.+..--+++++.|..+.+|..+  +    -..+|..++++|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~--~----~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS--R----RTWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc--h----hHHHHHHHHHcCeee
Confidence            467889999999999888889999999888777643  2    246788888888865

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.50  E-value=19  Score=34.11  Aligned_cols=210  Identities=17%  Similarity=0.181  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHH----HHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCC
Q 018650           56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALS----IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES  131 (352)
Q Consensus        56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~----lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~  131 (352)
                      +.+--+.+.++.+.+=-|+.+.|--    -..++    .+=.++++..+.+.+-++++...+.+|++|+.++..--.+..
T Consensus        88 YaAcs~sYLlAMVssN~Alq~vpYP----TqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~  163 (337)
T KOG1580|consen   88 YAACSASYLLAMVSSNQALQYVPYP----TQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG  163 (337)
T ss_pred             HHHHHHHHHHHHHhccchhcccCCc----HHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence            3444455556666666667776643    22222    334467788889999999999999999999998876533221


Q ss_pred             ----CCCCHHHHHHHhcChhHHHHHHHHH-HHHHHH--HHhhcccCCCcchHHHHHHHH-hhhhHHHHHHHHHHHHHHHh
Q 018650          132 ----PITSVQEIWSLATQPAFLLYVASVI-VLVFIL--IFHFAPRCGNTNALVFIGICS-LMGSLSVMSVKALGTSLKLT  203 (352)
Q Consensus       132 ----~~~t~~el~~~~~~p~fl~y~~~~~-~~~~~l--~~~~~~r~g~~~~~~~~~i~g-llg~~tvl~~K~v~~~l~~~  203 (352)
                          +..-..|+..         .+.+.. ..-...  -.+..-+.+..+++.|.-.-+ ++-|...+.+   ++ +.+.
T Consensus       164 g~e~~t~g~GElLL---------~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfT---GE-lweF  230 (337)
T KOG1580|consen  164 GAEDKTFGFGELLL---------ILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFT---GE-LWEF  230 (337)
T ss_pred             CCcccccchHHHHH---------HHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheeh---hh-HHHH
Confidence                2222223321         111100 000000  011122233455666654433 3223333322   11 1111


Q ss_pred             hcCCccccchHHHH-HHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 018650          204 FEGKNQLLYPDTWF-FMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG  282 (352)
Q Consensus       204 ~~g~~~~~~~~~y~-~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G  282 (352)
                      +  ...-+||..|. +....+.+++.| +|.=+-...|.+.... +....--++++++++++|+..  .++.||.    |
T Consensus       231 ~--yF~~RhP~~~~~l~l~ai~s~LGQ-~fIF~tv~~FgPLtCS-ivTTTRKfFTil~SVllf~np--ls~rQwl----g  300 (337)
T KOG1580|consen  231 F--YFVQRHPYVFWDLTLLAIASCLGQ-WFIFKTVEEFGPLTCS-IVTTTRKFFTILISVLLFNNP--LSGRQWL----G  300 (337)
T ss_pred             H--HHHHhccHHHHHHHHHHHHHHhhh-HHHHHHHHHhCCeeEE-EEeehHHHHHHHHHHHHhcCc--CcHHHHH----H
Confidence            0  01235776544 455556667777 6666667777653322 222334467899999999984  4566664    5


Q ss_pred             HHHHHHHHhh
Q 018650          283 FVVVLSGTIL  292 (352)
Q Consensus       283 ~~lii~Gv~l  292 (352)
                      .++++.|...
T Consensus       301 tvlVF~aL~~  310 (337)
T KOG1580|consen  301 TVLVFSALTA  310 (337)
T ss_pred             HHHHHHHhhh
Confidence            5556655544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=89.04  E-value=10  Score=36.65  Aligned_cols=232  Identities=16%  Similarity=0.252  Sum_probs=116.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhc-hhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC
Q 018650           55 LWWVGMAIMIVGEVANFVAYAFA-PAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI  133 (352)
Q Consensus        55 ~W~~G~~l~~~g~~~~~~Al~~a-p~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~  133 (352)
                      .|..=+.++-.-.+.|=.|+.|. |.-+=-=+=+.+++.|+++++.++|.|-+.+++..++++.+|+++.-++..++...
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            45555555555566776677663 22222224577899999999999999999999999999999998876665443321


Q ss_pred             --CCHHHHHHHhcChhHHHHHHHHHHHHHHH----HH--hhcccCCCc--chHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 018650          134 --TSVQEIWSLATQPAFLLYVASVIVLVFIL----IF--HFAPRCGNT--NALVFIGICSLMGSLSVMSVKALGTSLKLT  203 (352)
Q Consensus       134 --~t~~el~~~~~~p~fl~y~~~~~~~~~~l----~~--~~~~r~g~~--~~~~~~~i~gllg~~tvl~~K~v~~~l~~~  203 (352)
                        .+.++-...-..+.|++-.++...+.++-    ++  ..++|+|+.  ..+.|.=.-++=+ +- ...|-+.......
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~-Fl-f~~~div~~~~~~  223 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPL-FL-FMGDDIVSHWRLA  223 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccch-HH-HhcchHHHHHHHH
Confidence              11111100011133333222222111111    11  134667753  3444432222100 00 0111111111111


Q ss_pred             hcCC------ccccchHHHHHHHHHHHHHHHHHHHHHHhhc---ccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHH
Q 018650          204 FEGK------NQLLYPDTWFFMLVVAICVIMQMNYLNKALD---TFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAA  274 (352)
Q Consensus       204 ~~g~------~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~---~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~  274 (352)
                      ....      --+.-|.-|..+   +..+++|-.+.-.-..   ..++ ..+.+.-..=-+.+.+.+.++|+.  +++++
T Consensus       224 ~~se~~~~p~~g~~vP~~~~yL---l~n~L~Qy~CikgVy~L~te~~s-LTVTlvltlRKFvSLl~SiiyF~N--pft~~  297 (330)
T KOG1583|consen  224 FKSESYLIPLLGFKVPSMWVYL---LFNVLTQYFCIKGVYILTTETSS-LTVTLVLTLRKFVSLLFSIIYFEN--PFTPW  297 (330)
T ss_pred             hcCcceeccccCccccHHHHHH---HHHHHHHHHHHHhhhhhhceecc-eEEEEeeeHHHHHHHhheeeEecC--CCCHH
Confidence            1110      112234444432   2335666444322221   2222 222333333446788999999998  45676


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCC
Q 018650          275 SIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       275 ~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      ++    +|..+++.|+.+-+....
T Consensus       298 h~----lGa~lVF~Gt~~fa~~~~  317 (330)
T KOG1583|consen  298 HW----LGAALVFFGTLLFANVWN  317 (330)
T ss_pred             HH----HHHHHHHHHHHHHHHHHc
Confidence            66    566778888877664443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=88.48  E-value=0.31  Score=46.04  Aligned_cols=221  Identities=14%  Similarity=0.227  Sum_probs=128.3

Q ss_pred             ccchhHHHHHHHH---HHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhhe
Q 018650           51 LLEPLWWVGMAIM---IVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSII  122 (352)
Q Consensus        51 l~~p~W~~G~~l~---~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~  122 (352)
                      +.-..|..|++-=   .+|...||-|......|...|+. +..++-+.+++.+.+||=-+..+.    ++.++++.|..+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            3334677777544   47888999999999999999986 578899999999999998887665    677888889888


Q ss_pred             eeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHH--HHHHHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHH
Q 018650          123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVL--VFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSL  200 (352)
Q Consensus       123 ~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~--~~~l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l  200 (352)
                      -....+.+++.++++.+.+          ....+..  +....|...+|.  -+          +.+.++++-++++..+
T Consensus       134 Ts~~~~~nk~~~~~~n~kk----------gi~~L~iSt~GYv~yvvl~~~--f~----------v~g~saiLPqAiGMv~  191 (288)
T COG4975         134 TSKQDRNNKEEENPSNLKK----------GIVILLISTLGYVGYVVLFQL--FD----------VDGLSAILPQAIGMVI  191 (288)
T ss_pred             eeeeccccccccChHhhhh----------heeeeeeeccceeeeEeeecc--cc----------ccchhhhhHHHHHHHH
Confidence            7665554455545444332          1111100  000011112221  00          2445555555544332


Q ss_pred             HH---hhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Q 018650          201 KL---TFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASII  277 (352)
Q Consensus       201 ~~---~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~  277 (352)
                      -.   .....+-..+-.+|.-++.++.-...-+.++-.+=+...|+ ...+-+..- +.+.+.|..+++|..  +..++.
T Consensus       192 ~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt-~FSlSQlgV-iisTiGGIl~L~ekK--tkkEm~  267 (288)
T COG4975         192 GALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVAT-SFSLSQLGV-IISTIGGILFLGEKK--TKKEMV  267 (288)
T ss_pred             HHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceee-eeeHhhhee-eeeecceEEEEeccC--chhhhh
Confidence            21   11222233445556555444443333322221111222221 112222211 346688999999965  488999


Q ss_pred             HHHHHHHHHHHHHhhhccCC
Q 018650          278 SEICGFVVVLSGTILLHTTK  297 (352)
Q Consensus       278 ~~~~G~~lii~Gv~lLs~~~  297 (352)
                      ....|.++++.|..++.-.|
T Consensus       268 ~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         268 YVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             hhhhhHHHHHHHhhhhheec
Confidence            99999999999999887544

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=88.37  E-value=15  Score=33.96  Aligned_cols=59  Identities=19%  Similarity=0.260  Sum_probs=53.9

Q ss_pred             HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650           67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI  125 (352)
Q Consensus        67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~  125 (352)
                      .-....|+.....+.+..+.+..-.|.-+++...||+|+...+++..++.+.|++++..
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay  125 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY  125 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence            45667889999999999999999999999999999999999999999999999888754

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=86.37  E-value=32  Score=33.00  Aligned_cols=183  Identities=11%  Similarity=0.122  Sum_probs=97.1

Q ss_pred             HHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChh
Q 018650           68 VANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPA  147 (352)
Q Consensus        68 ~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~  147 (352)
                      .+-..++...|+-+.-.+-..+.+.-+.+..+      +.+|.+.+.+.+.|..++.-.++..+   +.|.+        
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~~~---~lDp~--------  148 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQSVW---SLDPV--------  148 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCCcC---cCCHH--------
Confidence            34456788999999888888887776666554      45788888899999888764443333   22222        


Q ss_pred             HHHHHHHHHHHHHHHHHh-hcccCCC-cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHH-HHHHH
Q 018650          148 FLLYVASVIVLVFILIFH-FAPRCGN-TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFM-LVVAI  224 (352)
Q Consensus       148 fl~y~~~~~~~~~~l~~~-~~~r~g~-~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l-~~~v~  224 (352)
                      =..|.....  .+...|. ..+|-|+ .+.-.=.++.-+++++-++=   ++.     .+....+.+|..-..- .+.+.
T Consensus       149 Gv~~Al~AG--~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~P---ig~-----~~ag~~l~~p~ll~laLgvavl  218 (292)
T COG5006         149 GVALALGAG--ACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLP---IGA-----AQAGPALFSPSLLPLALGVAVL  218 (292)
T ss_pred             HHHHHHHHh--HHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhh---hhh-----hhcchhhcChHHHHHHHHHHHH
Confidence            233322222  2222232 2344442 11100001111112111110   010     1223345666544332 22333


Q ss_pred             HHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650          225 CVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI  280 (352)
Q Consensus       225 ~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~  280 (352)
                      +...--..-.-||++-++. ..-+..+.++.++.+.|+++++|..  ++.|+....
T Consensus       219 SSalPYsLEmiAL~rlp~~-~F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~  271 (292)
T COG5006         219 SSALPYSLEMIALRRLPAR-TFGTLLSLEPALAALSGLIFLGETL--TLIQWLAIA  271 (292)
T ss_pred             hcccchHHHHHHHhhCChh-HHHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHH
Confidence            3333334445678877654 4556678899999999999999965  466665443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=85.46  E-value=4.4  Score=40.31  Aligned_cols=75  Identities=13%  Similarity=0.096  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          223 AICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDG-QTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       223 v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~-~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      +.-.+.|+ .+-++.|.--.+.-.|+..-.-.+.+.+.+.++|+||+. .+..+......|.++++.|+.+-++...
T Consensus        81 ~~W~iG~i-~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         81 ALWGIGGI-TYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHhhhh-hHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            33455553 334577878888889999998889999999999999971 1223344488999999999999988443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=85.37  E-value=5.3  Score=38.40  Aligned_cols=114  Identities=19%  Similarity=0.237  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc---------------------CC---cccccccchhHHHHHHHH
Q 018650            8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA---------------------GV---GGFTYLLEPLWWVGMAIM   63 (352)
Q Consensus         8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~---------------------~~---~~~~~l~~p~W~~G~~l~   63 (352)
                      ..|+++.+++-++.+.-.+.|++-.++-+.++ .+.                     +.   ...-....|..+.-+++.
T Consensus       153 ~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~-~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~  231 (303)
T PF08449_consen  153 ALGIILLLLSLLLDAFTGVYQEKLFKKYGKSP-WELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF  231 (303)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence            45999999999999999999999766543321 000                     00   000111223333333332


Q ss_pred             -HHHHHHHH---HHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650           64 -IVGEVANF---VAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII  122 (352)
Q Consensus        64 -~~g~~~~~---~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~  122 (352)
                       ..+.+++.   .....-.....+-+..+.-+++.+++..+.+++++..+|.|++++..|..+
T Consensus       232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~  294 (303)
T PF08449_consen  232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence             23333332   222333334455566667788899999999999999999999999999765

; GO: 0055085 transmembrane transport

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=84.33  E-value=2.8  Score=41.41  Aligned_cols=52  Identities=21%  Similarity=0.304  Sum_probs=44.3

Q ss_pred             HHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650           72 VAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII  123 (352)
Q Consensus        72 ~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~  123 (352)
                      .++...+.....=.+.+--++..+++..+++|+++..+++|+++++.|+.+.
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            4566666666677777888999999999999999999999999999998753

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=84.21  E-value=33  Score=35.72  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=22.1

Q ss_pred             HhhcccCCCcchHHHHHHHHhhhhHHHHHHHH
Q 018650          164 FHFAPRCGNTNALVFIGICSLMGSLSVMSVKA  195 (352)
Q Consensus       164 ~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~  195 (352)
                      ...+.|+|+|+.+.+..+-+++++......|.
T Consensus        81 ~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~  112 (485)
T KOG0569|consen   81 GLLADRFGRKNALLLSNLLAVLAALLMGLSKS  112 (485)
T ss_pred             HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678999998776666666666666655554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.88  E-value=1.5  Score=36.08  Aligned_cols=47  Identities=21%  Similarity=0.458  Sum_probs=39.3

Q ss_pred             HhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650           82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ  129 (352)
Q Consensus        82 v~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~  129 (352)
                      -+.-|.+=++.+.+-.+.+-|+++++.|++|..+|.+|+.++. ++|.
T Consensus        60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~-~~PR  106 (107)
T PF02694_consen   60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL-FAPR  106 (107)
T ss_pred             HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE-ecCC
Confidence            3455677788888999999999999999999999999988764 5554

; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=83.51  E-value=25  Score=31.93  Aligned_cols=57  Identities=16%  Similarity=0.108  Sum_probs=39.0

Q ss_pred             HHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHh
Q 018650          228 MQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTI  291 (352)
Q Consensus       228 ~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~  291 (352)
                      .|..+.+-.++++|++ ..-+....-.+.+.+.+..+|+|...  +    ....|..+++.|++
T Consensus       164 ~~~~~v~~vlk~~~~~-~~~~~~~~~~~~s~lls~~~f~~~ls--~----~~~~g~~lV~~~~~  220 (222)
T TIGR00803       164 GGGLCIGGVVRYADNT-TKSFVTALSIILSTLASVRLFDAKIS--S----TFYLGAILVFLATF  220 (222)
T ss_pred             hcCceeeehhHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCcc--H----HHHHHHHHHHeeeE
Confidence            3445677778888876 55555667778888899999998544  3    45566666666654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=83.40  E-value=50  Score=32.81  Aligned_cols=285  Identities=14%  Similarity=0.239  Sum_probs=141.5

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHH-----------------hhhhcCcccCCcccccccc----hhHHHHH-
Q 018650            3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRR-----------------AAAASGVRAGVGGFTYLLE----PLWWVGM-   60 (352)
Q Consensus         3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~-----------------~~~~~~~~~~~~~~~~l~~----p~W~~G~-   60 (352)
                      |.++.++|++...+++++.+.=.+=.||= ++                 .|-.-..-.-.+..+++++    -+|+.-+ 
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            56788899999999999987766655551 10                 0000000000001111111    1222211 


Q ss_pred             -HHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcC-------cCCccchhhHHHHhhhhheeeeecCCCC
Q 018650           61 -AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHE-------KLPQLGILGCVMCIAGSIIIVIHAPQES  131 (352)
Q Consensus        61 -~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E-------~~~~~~~~G~~li~~G~~~~v~~~p~~~  131 (352)
                       ++-.+|-+..-.+.++.-.|+-+.+. .++.++..++-..+.++       +-.+.-++|++++++|+.+....+...+
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence             11134555555666666667666643 34555666666665443       2334566999999999998876664222


Q ss_pred             CC--CCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh--c-c------cCCCcchHHHHHH----HHhhhhHHHHHHHHH
Q 018650          132 PI--TSVQEIWSLATQPAFLLYVASVIVLVFILIFHF--A-P------RCGNTNALVFIGI----CSLMGSLSVMSVKAL  196 (352)
Q Consensus       132 ~~--~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~--~-~------r~g~~~~~~~~~i----~gllg~~tvl~~K~v  196 (352)
                      +.  .+.+|. .+  .-+.++ +.+..+......+-.  . |      ..|...  .|...    --+.||+.+-..=++
T Consensus       160 ~~~~~~~~ef-n~--~kGl~i-Av~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~--l~~~l~~~vvv~~GGf~tN~~yc~  233 (344)
T PF06379_consen  160 KELGEEAKEF-NF--KKGLII-AVLSGVMSACFNFGLDAGKPIHEAAVAAGVNP--LYANLPVYVVVLWGGFITNLIYCL  233 (344)
T ss_pred             hhhccchhhh-hh--hhhHHH-HHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCc--HHHhCchhhhhhhhHHHHHHHHHH
Confidence            21  122221 11  111121 111111111111111  0 1      122211  11111    113445444333333


Q ss_pred             HHHHH-HhhcCCccc--cch---HHHHHHHHHHHHHHHHHHHHHHhhcccC---ccccchhHHHHHHHHHHHHHHHHhcc
Q 018650          197 GTSLK-LTFEGKNQL--LYP---DTWFFMLVVAICVIMQMNYLNKALDTFN---TAVVSPIYYVMFTSLTILASVIMFKD  267 (352)
Q Consensus       197 ~~~l~-~~~~g~~~~--~~~---~~y~~l~~~v~~~l~Q~~~ln~aL~~~~---a~~v~Pi~~v~~t~~~i~~G~i~f~E  267 (352)
                      -...+ .+.+..+.+  ..+   .-|++.+..-+.=-.|..+...+-..-.   ....-++......+++.+.|. .++|
T Consensus       234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~lkE  312 (344)
T PF06379_consen  234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-ILKE  312 (344)
T ss_pred             HHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-HHHH
Confidence            22222 112111112  122   2255544444455778888777643222   244566666666666666665 5799


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhhcc
Q 018650          268 WDGQTAASIISEICGFVVVLSGTILLHT  295 (352)
Q Consensus       268 ~~~~~~~~~~~~~~G~~lii~Gv~lLs~  295 (352)
                      |.+.+........+|+.+++.++.++.-
T Consensus       313 WKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  313 WKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             hccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            9999998899999999999998877653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=82.89  E-value=6  Score=38.46  Aligned_cols=80  Identities=18%  Similarity=0.303  Sum_probs=51.5

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650          210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG  289 (352)
Q Consensus       210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G  289 (352)
                      +++|..|.=++..+.+.+.+.    -|+...+++++.|+--... +++.+.+-.+++|..+.      ....|+++++.|
T Consensus        48 l~~~~W~~G~~~~~~g~~~~~----~Al~~ap~slv~Plg~~~l-v~~~~~a~~~l~e~~~~------~~~~G~~l~i~G  116 (300)
T PF05653_consen   48 LRRPLWWIGLLLMVLGEILNF----VALGFAPASLVAPLGALSL-VFNAVLARFFLGEKLTR------RDIVGCALIILG  116 (300)
T ss_pred             HhhHHHHHHHHHHhcchHHHH----HHHHhhhHHHHHHHHhhhh-hhHHHHhHHHhcccchH------hHHhhHHHHHhh
Confidence            344545543333333333332    4788889999999976544 56777788888996553      346788888889


Q ss_pred             HhhhccCCCCC
Q 018650          290 TILLHTTKDFE  300 (352)
Q Consensus       290 v~lLs~~~~~~  300 (352)
                      +.++..+.+++
T Consensus       117 ~~liv~~~~~~  127 (300)
T PF05653_consen  117 SVLIVIFAPKE  127 (300)
T ss_pred             heeeEEeCCCC
Confidence            87665554443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=81.88  E-value=1.3  Score=42.08  Aligned_cols=70  Identities=23%  Similarity=0.318  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650          226 VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD  298 (352)
Q Consensus       226 ~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~  298 (352)
                      .+.|+.-+ ||.+.-..+...|+..-+--+.+.+.|++.|+||.+  +.+.+.=..+.++++.|+++=+..++
T Consensus        70 s~GQ~~Qf-ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t--~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          70 SFGQANQF-KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTT--PTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhh-hheeeeeeeccccccchhhHhhceeeeEEEEeccCc--chhHHHHHHHHHHHHHhheEeeeecc
Confidence            45564333 578888888899999999989999999999999987  56676667777889999988776554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	352
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.95
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.83
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.66
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.6

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.95  E-value=5.5e-09  Score=85.37  Aligned_cols=99  Identities=13%  Similarity=0.071  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhHHH
Q 018650           12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSI   90 (352)
Q Consensus        12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~l   90 (352)
                      ++.+++.++.+.|+...|++.       +         ..+.+.++.+.+.+++++.+...|+...|++.+.|+ .++++
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~-------~---------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~   68 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSE-------G---------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGI   68 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc-------C---------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHH
Confidence            455677888999999999851       1         112355678888889999999999999999999999 89999


Q ss_pred             HHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeee
Q 018650           91 IVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH  126 (352)
Q Consensus        91 v~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~  126 (352)
                      +++.+++.+++||++++.+++|+.+++.|+.++...
T Consensus        69 v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           69 VLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999887543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.83  E-value=5.3e-09  Score=88.87  Aligned_cols=100  Identities=12%  Similarity=0.054  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhHHH
Q 018650           12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSI   90 (352)
Q Consensus        12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~l   90 (352)
                      ++.+++.++.+.|+.+.|++.   +             ..+.|.++.|++++++++.++..++...|++.+.|+ .++++
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~---g-------------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~p   68 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE---G-------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGI   68 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC----------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---c-------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Confidence            455667788999999999862   1             012345678999999999999999999999999999 89999


Q ss_pred             HHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeec
Q 018650           91 IVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA  127 (352)
Q Consensus        91 v~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~  127 (352)
                      +++.+++.+++||+++..+++|++++++|+.++....
T Consensus        69 v~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           69 VLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999998875433

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.66  E-value=0.00012  Score=61.80  Aligned_cols=70  Identities=19%  Similarity=0.250  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCC
Q 018650          222 VAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTK  297 (352)
Q Consensus       222 ~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~  297 (352)
                      .+++...-..++++++++.|.+.++|+....-++++++.|.++|+|..+.      ...+|.++++.|++++.+.+
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~------~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHhcCC
Confidence            33444445678899999999999999977778899999999999996553      45688899999999997654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.60  E-value=0.00076  Score=54.57  Aligned_cols=69  Identities=19%  Similarity=0.255  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCC
Q 018650          223 AICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTK  297 (352)
Q Consensus       223 v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~  297 (352)
                      +.+...-..++++++++.|.+.++|+....-++.+.+.|.++|+|..+  +    .-.+|..+++.|++++...+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s--~----~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--L----PAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHHHHHHhcCC
Confidence            334444457889999999999999998788889999999999999654  4    45788899999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00