Citrus Sinensis ID: 018663

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
Protein Sequence
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHHHHHHHHHHccccEEEcccccccHHHHHccccEEEEEEEcccccccccccccccccccccccccEEcHHHHHcccccHHHHHHHHHccHHccccHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHcEEEccccEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHEEccHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHEHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTfiyyrnrtrppltvSIICKIFGLGLISCCVQTCLYvgigyssptlssaivdlTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKgpalvsmssssnlhnelrspqknwiIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAernpnswrlkpdtelIAIGCSAFFAVALRSLAHTwachkkgpvyvsmyKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSViwgqseeekmiddkdidslkssspkapllqtksifcrn
Flexible Loop (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDslkssspkapllqtksifcrn
Low Complexity Region (SEG)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSeeekmiddkdidslkssspkapllQTKSIFCRN
Disordered region (IsUnstruct)
**SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALV****************KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISOPRED)
***VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSM****************WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Disordered Region (DISPRO)
*WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSS************KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS*********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	352	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.940	0.899	0.458	1e-75
Q94JU2	367	WAT1-related protein At3g	no	no	0.951	0.912	0.461	2e-75
F4KHA8	370	WAT1-related protein At5g	no	no	0.934	0.889	0.443	4e-70
Q945L4	339	WAT1-related protein At5g	no	no	0.906	0.941	0.442	1e-66
F4JK59	347	WAT1-related protein At4g	no	no	0.886	0.899	0.453	2e-62
Q9LRS5	353	WAT1-related protein At3g	no	no	0.928	0.926	0.394	2e-56
Q56X95	355	WAT1-related protein At3g	no	no	0.920	0.912	0.387	1e-55
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.931	0.911	0.392	4e-52
F4IYZ0	358	WAT1-related protein At3g	no	no	0.928	0.913	0.379	1e-51
F4I5D5	375	WAT1-related protein At1g	no	no	0.943	0.885	0.333	5e-49

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  283 bits (724), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 160/349 (45%), Positives = 218/349 (62%), Gaps = 18/349 (5%)

Query: 8   AVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLT 67
           A M AVEC  VGS+TL KAA  +G S +V + YS   + + +LLP + I+ R+R  P   
Sbjct: 22  AAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTL-LLLPLSVIFGRSRRLPAAK 80

Query: 68  VSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRV 127
             +  KIF LGL+    Q     GI YSSPTL+SAI +LTPAFTF LA+I RME++ LR 
Sbjct: 81  SPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRLRS 140

Query: 128 QSSLAKSIGTMVSIAGALTVTLYKGPALVSMSS------SSNLHNELRSPQKNWIIGGLV 181
            ++ AK IG ++SI+GAL V LYKGP +++ +S      +  LH +L S + +WIIGGL+
Sbjct: 141 SATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGGLL 200

Query: 182 LAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDT 241
           LA+  F +S+ YI+QT ++  YPEE+   F   +F T+ S  V L AE N  SW LKPD 
Sbjct: 201 LASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKPDI 260

Query: 242 ELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV 301
            L AI  S  F     +L HTW  H KGPVY+S+++PL I  A+ MG   LGD L+LGSV
Sbjct: 261 SLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLGSV 320

Query: 302 VGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 348
           +G+ I+  GFY+VIWG++ E         D++K+   S ++PLL T  I
Sbjct: 321 IGSMILCIGFYTVIWGKARE---------DTIKTVAGSEQSPLLLTHII 360

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  283 bits (723), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/353 (46%), Positives = 227/353 (64%), Gaps = 18/353 (5%)

Query: 6   VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPP 65
           VTA +V +EC  VG +TL KAA  KG S  V IVYS   AA+ +LLPS F  +R+RT PP
Sbjct: 13  VTA-LVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAAL-LLLPSLFCSFRSRTLPP 70

Query: 66  LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDL 125
           +  SI+ KI  LG+I CC     Y GI YSSPTL+SAI +LTPAFTF+LA++ RME +  
Sbjct: 71  MNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSF 130

Query: 126 RVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-NLHNELRSPQKNWIIGGLVLAA 184
           +  SS+AK +GT+VSI GA  VTLY GP +++ S  S +L ++  +P  NWI+G   LA 
Sbjct: 131 KRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNP--NWILGAGFLAV 188

Query: 185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDTEL 243
             F + L YIVQT I+REYP E        + V+  + +V L  E N   +W++KP+  L
Sbjct: 189 EYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIAL 248

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
           ++I CS  F   + +  HTWA   KGP++V+M+KPL I  A+ MGV  L D+LY+GS++G
Sbjct: 249 VSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIG 308

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDK-----------DIDSLKSSSPKAPLLQT 345
           AT++  GFY+V+WG+++E  +++D            D+DS  S S KAPLL++
Sbjct: 309 ATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDS-PSGSQKAPLLES 360

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/347 (44%), Positives = 217/347 (62%), Gaps = 18/347 (5%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           MVAVEC+ VGS+TL KAA  +G S +V + Y+   A + +LLP + I+ R++  P     
Sbjct: 25  MVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATL-VLLPLSLIFGRSKRLPSAKTP 83

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           +   IF L L+          GI YSSPTL+SAI +LTPAFTF LA+I RME++ LR  +
Sbjct: 84  VFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSA 143

Query: 130 SLAKSIGTMVSIAGALTVTLYKGP------ALVSMSSSSNLHNELRSPQKNWIIGGLVLA 183
           + AK IGT+VSI+GAL V LYKGP      +L   S + +L+  L S   +WIIGGL+LA
Sbjct: 144 TQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLLA 203

Query: 184 AGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTEL 243
                +S+ YI+QT ++  YPEE+   F+  +  T+ S  V L AE++ NS+ LKP   L
Sbjct: 204 TQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSL 263

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
            ++  S     +  S+ HTW  H KGPVY+S++KPL IV A+ MGV  LGD LYLGSV+G
Sbjct: 264 ASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVIG 323

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 348
           + I++ GFY+VIWG++ E         DS+K+   + ++PLL + +I
Sbjct: 324 SLILSLGFYTVIWGKARE---------DSIKTVAGTEQSPLLPSHTI 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/337 (44%), Positives = 210/337 (62%), Gaps = 18/337 (5%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           MV  E   VG +TL KAA +KG S FV++VYS  F ++ +LLP TF  +R+R+ PPLT S
Sbjct: 17  MVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSL-LLLPLTFFSFRSRSLPPLTFS 75

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+C +  LGLI+   Q   Y GI YSSPTLSSA+ ++ PAFTFILA++ RME + L  +S
Sbjct: 76  ILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKS 135

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFL 189
           S+AK +GT++SI GAL VTLY GP L  MSS S           +WIIGG +LA     +
Sbjct: 136 SVAKVLGTILSIIGALVVTLYHGPML--MSSHS-----------DWIIGGGLLALQYILV 182

Query: 190 SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGC 248
           S+ Y+V    +  YP  ++ T +  V + +    V+L+AE+ NP +W ++ D  LI +  
Sbjct: 183 SVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVA 242

Query: 249 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA 308
           +         + HTWA   KGPVY+SM+KPL I+ A +     LG++LYLGSV+G  +++
Sbjct: 243 TGILNSGYYVI-HTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILIS 301

Query: 309 FGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQT 345
            GFY V+WG+++E+K+     I+S  S S  APLL  
Sbjct: 302 IGFYMVLWGKAKEDKVDIIGAIES--SPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  239 bits (611), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 206/322 (63%), Gaps = 10/322 (3%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A+EC  VGSS L KAA  +G S +V + Y+    A  +LL  + I+ R+R+ P    S
Sbjct: 21  MIAIECTTVGSSILYKAATLRGFSFYVFVFYAYV-GATLVLLLLSLIFGRSRSLPTAKSS 79

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           +  KIF L L+    +     GI YSSPTLSSAI +LTPAFTFILA+  RME++ LR  +
Sbjct: 80  LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFL 189
           + AK IGT+VSI+GAL + LYKGP L+  +S ++        + +WIIGGL+L      L
Sbjct: 140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF-------ESSWIIGGLLLGLQFLLL 192

Query: 190 SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCS 249
           S+ +I+QT I+  YPEE+   F   +  T+ S  V L+ E++ NSW+LKP   L ++  S
Sbjct: 193 SVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIYS 252

Query: 250 AFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAF 309
             F  +L S+ HTW  H KGPVY+S++KPL I  A+ M    LGDTL+LGSV+G+ I++F
Sbjct: 253 GLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILSF 312

Query: 310 GFYSVIWGQSEEE--KMIDDKD 329
           GFY+VIWG++ E+  K + D +
Sbjct: 313 GFYTVIWGKAREDSTKTVSDSE 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  219 bits (559), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A E   VG STL K A +KG + +  + YS   A++ +L  S F   R+R+ PPL++S
Sbjct: 18  MLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLP-SLFFTDRSRSLPPLSLS 76

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+ KI  LGL+        Y+GI YSSPTL+SAI ++TPA TFILA+I RMEK+  + +S
Sbjct: 77  ILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-----LRSPQKNWIIGGLVLAA 184
           S+AK +GT++S+ GAL V LY GP +   SS   ++       L S   +W+IGG +L  
Sbjct: 137 SVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTEL 243
              F+S+ +I+Q  I+  YP     +F+  V V+I ++++ L+ E+ NP+ W ++ D  L
Sbjct: 197 RDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDITL 256

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
           I I   A    ++  + H+W    KGP+Y++++KPL I+ A++M    L D+LYLG ++G
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLGCLIG 315

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 343
             ++  GFY+V+WG++ EE     KD   L S   + PLL
Sbjct: 316 GLLITLGFYAVMWGKANEE-----KDQLLLVSGKERTPLL 350

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 205/343 (59%), Gaps = 19/343 (5%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A E   V  +TL KAA +KG + +  ++YS    +I +LLPS    YR+R+ P L++S
Sbjct: 17  MLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSI-VLLPSHIFSYRSRSLPSLSLS 75

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+CKI  LGL+        ++GI YS+PTL+SAI ++ PA TFILA+I RMEK   + +S
Sbjct: 76  ILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEKASFKEKS 135

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRS-------PQKNWIIGGLVL 182
           S+AK +GT+VS+ GAL V LY GP + + SS      +LR           +WIIGG +L
Sbjct: 136 SVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPP--FPQLRQLLLPLSSSNSDWIIGGCLL 193

Query: 183 AAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDT 241
           A     + + +I+Q  I++ YP     +F   +  +I ++++ ++AE+ NP+ W +  D 
Sbjct: 194 AIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWIIHFDI 253

Query: 242 ELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV 301
            L+ I     F     ++ H WA   KGPVY+++++PL I+ A+IMG   LGD+ YLGS+
Sbjct: 254 TLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSFYLGSL 312

Query: 302 VGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQ 344
           VG  +++ GFY+V+WG+++E K           S S + PLL 
Sbjct: 313 VGGILISLGFYTVMWGKAKEGK-------TQFLSLSEETPLLD 348

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  205 bits (522), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 203/344 (59%), Gaps = 16/344 (4%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+ VE   VG STL K A +KG + +  + YS   A++ +L  S F   R+ + PPL+VS
Sbjct: 21  MLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLP-SLFFTNRSSSLPPLSVS 79

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+ KI  LG +        Y+GI YSSPTL+SAI ++TPA TFILA+I RMEK+  + +S
Sbjct: 80  ILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKERS 139

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKNWIIGGLVLAA 184
           SLAK +GT++S+ GAL V  Y GP +   SS   ++    SP       +W+IGG +L  
Sbjct: 140 SLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLTM 199

Query: 185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTEL 243
              F+S+ +I+Q  I+  YP     +F+  V V+I ++ + L+ E+ NP+ W +  D  L
Sbjct: 200 QGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDITL 259

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
           I I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L D+LYLG ++G
Sbjct: 260 ITIVTMA-IVTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 318

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLK-SSSPKAPLLQTK 346
             ++  GFY+V+WG++ EEK       D L  S   K PLL  +
Sbjct: 319 GILITLGFYAVMWGKANEEK-------DQLSFSEKEKTPLLLNR 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  203 bits (517), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 203/340 (59%), Gaps = 13/340 (3%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A E   VG STL K A +KG + +  + YS   A++ +L  S F   R+R+ PPL+ S
Sbjct: 18  MLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLP-SLFFTNRSRSLPPLSAS 76

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+ KI  LG +         +GI YS+PTL+SAI ++ PA TFILA+I RMEK+  + +S
Sbjct: 77  ILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKERS 136

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-----LRSPQKNWIIGGLVLAA 184
           S+AK +GT++S+ GA  V  Y GP +   SS   L+       L S + +W+IGG +L  
Sbjct: 137 SVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILTI 196

Query: 185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTEL 243
              F+S+ +I+QT I+REYPE    + +  + ++I ++++ L+ E+ NP+ W +  D  L
Sbjct: 197 QGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDITL 256

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
             I  +     ++  + H+WA   K P+Y++++KPL I+ A++MG   L D+LYLG ++G
Sbjct: 257 FTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLIG 315

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 343
             ++  GFY V+WG++ EEK   +K +    S   K PLL
Sbjct: 316 GILITLGFYVVMWGKANEEK---NKLLSF--SGKEKTPLL 350

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  195 bits (495), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 198/354 (55%), Gaps = 22/354 (6%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN-RTRPPL-T 67
           M  +E   +  + + K A+  G S FV +VY+NAF +I +LLP +F+++RN RT   + +
Sbjct: 16  MAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSI-LLLPFSFLFHRNERTEQSIFS 74

Query: 68  VSIICKIFGLGLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLR 126
             ++ ++F LG     + Q   +VG+ +SSP +  A+    P+F+F+L++I    KLD R
Sbjct: 75  WPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIILGRSKLDWR 134

Query: 127 VQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQK---------NWII 177
             S+ AK +GT+VS++GA    LYKGP  +  +SS++ +  L+S  K         NW +
Sbjct: 135 NTSTRAKLMGTIVSLSGAFVEELYKGP-FIRPASSASPNRFLKSVPKLLVYYNLPDNWFL 193

Query: 178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRL 237
           G + LA   F +SL  +VQT  +++YP  +       +  TIQ  + +L  ER+ ++W++
Sbjct: 194 GCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDLSAWKI 253

Query: 238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 297
           +P+ +L  I  +  F   +R+  H      KGP YV ++KP GI +A + G +   ++L+
Sbjct: 254 QPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFFVNSLH 313

Query: 298 LGSVVGATIVAFGFYSVIWGQ--SEEEKMIDDKDIDSLKS------SSPKAPLL 343
            GSV+GA I   G+++V WGQ    EEK   +++  S+K+         K PLL
Sbjct: 314 YGSVLGAAIAGVGYFTVSWGQLKESEEKQSSNEERKSIKTIHHRDEDEYKVPLL 367

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
359473431	348	PREDICTED: auxin-induced protein 5NG4-li	0.977	0.988	0.597	1e-115
296086520	350	unnamed protein product [Vitis vinifera]	0.982	0.988	0.568	1e-115
255581154	354	Auxin-induced protein 5NG4, putative [Ri	0.980	0.974	0.597	1e-115
225424734	341	PREDICTED: auxin-induced protein 5NG4-li	0.957	0.988	0.572	1e-113
255581150	348	Auxin-induced protein 5NG4, putative [Ri	0.974	0.985	0.595	1e-111
225424732	351	PREDICTED: auxin-induced protein 5NG4 [V	0.982	0.985	0.547	1e-109
296086528	317	unnamed protein product [Vitis vinifera]	0.886	0.984	0.598	1e-103
372477640	347	auxin-induced nodulin [Copaifera officin	0.977	0.991	0.535	5e-98
356502006	349	PREDICTED: auxin-induced protein 5NG4-li	0.965	0.974	0.554	7e-97
388507862	346	unknown [Lotus japonicus]	0.951	0.968	0.521	6e-93

>gi|359473431|ref|XP_002265468.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/348 (59%), Positives = 267/348 (76%), Gaps = 4/348 (1%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MWS  + A+M+ +ECLEVG STL+KAAM +G SDFV +VYSNA + + ILL    +++R 
Sbjct: 1   MWSSDLMALMLIIECLEVGLSTLSKAAMRRGMSDFVFVVYSNALS-VPILLFCCLLFHRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRM 120
           R  PPLT+SI+C+IF LG ISC  Q  L+VGI YSSPTL+SA+ DL PAFTFILA+ISRM
Sbjct: 60  RFPPPLTLSILCRIFILGFISCSTQMFLFVGIRYSSPTLASAMTDLVPAFTFILAIISRM 119

Query: 121 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-LRSPQKNWIIGG 179
           EKLDL+  S  AK IGT+VSI GAL VT+YKGP +   SS+  + +E LRS   NW+IGG
Sbjct: 120 EKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIGG 179

Query: 180 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 239
            +LA  +  ++L Y+VQTSIIR+YP ELM TFIC +FVT+QS++V+LIAER+P++WRLKP
Sbjct: 180 FLLAISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLKP 239

Query: 240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 299
           D ELIA+G SA   +A R  AH W  HKKGPV+V+M+KP+ IV A++MGVT LGD L+LG
Sbjct: 240 DVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHLG 299

Query: 300 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 347
           SV+GA I+AFGFY+V+WG+++EE  I+D     + SSS K PLLQ KS
Sbjct: 300 SVIGAAIIAFGFYTVMWGKAKEE--IEDMTTSGIDSSSHKDPLLQNKS 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086520|emb|CBI32109.3| unnamed protein product [Vitis vinifera]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/348 (56%), Positives = 269/348 (77%), Gaps = 2/348 (0%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MWS  +  VM+ +E LE+G +T++KAAM++G S+FV +VYSN FA  F+LL S  +++R 
Sbjct: 1   MWSFKLMLVMLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLL-SCLLFHRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRM 120
           +T PPLT SI+C+IF LGLISC +Q  +YVGI YSSPTL+SA+ DL PAFTFILA+I+RM
Sbjct: 60  KTPPPLTTSILCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRM 119

Query: 121 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMS-SSSNLHNELRSPQKNWIIGG 179
           E LDLRV+SS AKSIGT++SI GALT+T+Y+GP +   S +S+ L+  +  PQ NW+IGG
Sbjct: 120 ENLDLRVRSSRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGG 179

Query: 180 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 239
           ++ A  +F L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+P
Sbjct: 180 ILSAIAAFMLAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRP 239

Query: 240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 299
           D ELIAI  SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYLG
Sbjct: 240 DIELIAIVYSAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLG 299

Query: 300 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 347
           SVVGA I+A GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 300 SVVGAAIIAIGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581154|ref|XP_002531390.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528983|gb|EEF30974.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/350 (59%), Positives = 270/350 (77%), Gaps = 5/350 (1%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MW  GVTAVM+ +E LEVG +T+ KAAM+KG S ++L+VYSN  A I +LL S+ I+YR 
Sbjct: 4   MWGSGVTAVMLTLEFLEVGMNTVTKAAMSKGMSHYILVVYSNMIA-ISLLLSSSLIFYRK 62

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRM 120
           R  P +T+SIIC+IF L L+SC  Q   Y+GIGYSSPTL+SA++DLTPAFTFIL + SRM
Sbjct: 63  RIAPAITLSIICRIFVLSLLSCAGQVFTYIGIGYSSPTLASAMIDLTPAFTFILGVFSRM 122

Query: 121 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSN-LHNELR--SPQKNWII 177
           E+LDLR++S  AKSIGTMV I G L  TLYKG  +  +SSS + LH E+   SP  NW I
Sbjct: 123 ERLDLRIKSGQAKSIGTMVLIIGGLVFTLYKGLPITGISSSGDELHKEMLFLSPS-NWAI 181

Query: 178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRL 237
           GG  LAA S  L+L++++QT IIR+YP  L+     C FVTI S  V+L+AE++PN+WR+
Sbjct: 182 GGFFLAAHSIILALIFVIQTWIIRDYPSVLITNLFTCTFVTILSASVSLVAEKDPNAWRI 241

Query: 238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 297
           KPD +LI+IG +A FAV+LRS+ HTWACHKKGPVY SM+KP+G+V A+ MGV+ LGDTLY
Sbjct: 242 KPDIQLISIGFTAVFAVSLRSVVHTWACHKKGPVYTSMFKPIGMVIAVFMGVSFLGDTLY 301

Query: 298 LGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 347
           LGSV+GA I+AFGFY+V+WG+++EE  ++DK+  S + SSPKAPLLQ KS
Sbjct: 302 LGSVIGAVIIAFGFYAVMWGKTQEENTVEDKEDCSFEPSSPKAPLLQNKS 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424734|ref|XP_002266639.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/339 (57%), Positives = 264/339 (77%), Gaps = 2/339 (0%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+ +E LE+G +T++KAAM++G S+FV +VYSN FA  F+LL S  +++R +T PPLT S
Sbjct: 1   MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLL-SCLLFHRRKTPPPLTTS 59

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+C+IF LGLISC +Q  +YVGI YSSPTL+SA+ DL PAFTFILA+I+RME LDLRV+S
Sbjct: 60  ILCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRS 119

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMS-SSSNLHNELRSPQKNWIIGGLVLAAGSFF 188
           S AKSIGT++SI GALT+T+Y+GP +   S +S+ L+  +  PQ NW+IGG++ A  +F 
Sbjct: 120 SRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFM 179

Query: 189 LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGC 248
           L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+PD ELIAI  
Sbjct: 180 LAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVY 239

Query: 249 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA 308
           SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYLGSVVGA I+A
Sbjct: 240 SAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIA 299

Query: 309 FGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 347
            GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 300 IGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581150|ref|XP_002531388.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528981|gb|EEF30972.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/346 (59%), Positives = 262/346 (75%), Gaps = 3/346 (0%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MW  GVTA MVA E  EVG +T+ KAAM++G S FV  VYSNAFA + IL+PS+FI+YR 
Sbjct: 1   MWGTGVTAAMVATEFTEVGINTMMKAAMSRGMSQFVYTVYSNAFA-LLILIPSSFIFYRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRM 120
           R RP LTVSII + F LGL+SCCVQ  +  G+ YSSPTLS+A++DLTPAFTF+LA+ISRM
Sbjct: 60  RPRPQLTVSIIFRTFLLGLLSCCVQMFMNTGVKYSSPTLSAAMIDLTPAFTFLLAIISRM 119

Query: 121 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSN-LHNELRSPQKNWIIGG 179
           EKLD + QS+ AKSIGT+VS+AGAL VTLYKG  + ++ S SN L+  L      W+ GG
Sbjct: 120 EKLDYKSQSTQAKSIGTIVSVAGALIVTLYKGQPITTLPSESNSLNQPLLLLSSTWVTGG 179

Query: 180 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 239
           +   AG+  L+LLYIVQT I+++ P EL+ T I C FVT+ S++VAL+AE++ +SW LKP
Sbjct: 180 IFCTAGALCLALLYIVQTWILKDCPAELIITCIACFFVTVLSSIVALVAEKDISSWILKP 239

Query: 240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 299
           D ELIA  CSA FAV++RS+ H WAC KKGP+Y SM+KPLGI+ A  +G   LGDTLY G
Sbjct: 240 DIELIATFCSAVFAVSIRSVVHAWACRKKGPLYASMFKPLGIIIATFLGFYFLGDTLYDG 299

Query: 300 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSS-SPKAPLLQ 344
           SV+G  I+A GFYSV+WG+++EEKM  D+   S +SS SPKAPLL+
Sbjct: 300 SVIGGIIIALGFYSVLWGKAQEEKMGKDERNSSFESSASPKAPLLR 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424732|ref|XP_002266096.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086521|emb|CBI32110.3| unnamed protein product [Vitis vinifera]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/349 (54%), Positives = 270/349 (77%), Gaps = 3/349 (0%)

Query: 1   MWSVGVTAV-MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYR 59
           MWS  +TAV ++ +ECL+VG  TL+KAAM +G SD+V +VYSNA A + +L   + +++R
Sbjct: 1   MWSSELTAVILLTIECLDVGLITLSKAAMRRGMSDYVFVVYSNALA-VPVLFLCSLLFHR 59

Query: 60  NRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR 119
            R+ PPLT SI+C+IF LGL+SC +Q   ++GIGYSSPTL+SA+ +L PAFT++LA+++R
Sbjct: 60  RRSPPPLTPSILCRIFLLGLVSCSLQMLKFIGIGYSSPTLASAMTNLIPAFTYVLAIVTR 119

Query: 120 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSS-SNLHNELRSPQKNWIIG 178
           MEKLDL+V+SS AK +GT+VS+AGAL +T+YKGP +   S++ S L++ L  P+ NWIIG
Sbjct: 120 MEKLDLKVKSSRAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIG 179

Query: 179 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 238
           G + AA +F +++L + QTSIIR+YP EL+ T I  +F T+QS++V+LIAER+P++WRL+
Sbjct: 180 GFLTAAAAFMVAVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLR 239

Query: 239 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 298
            D ELIA+G S  F VALR   + W  H+KGPV+V+M+KP GIV A+IMGVT LGD L+L
Sbjct: 240 LDMELIAVGYSGIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHL 299

Query: 299 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 347
           GSV+GA I+A GFY+V+WG+++EEKM +D     + +SS + PLLQ KS
Sbjct: 300 GSVIGAAIIALGFYTVVWGKAKEEKMAEDIAACGVNTSSHRVPLLQNKS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086528|emb|CBI32117.3| unnamed protein product [Vitis vinifera]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/316 (59%), Positives = 242/316 (76%), Gaps = 4/316 (1%)

Query: 33  SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGI 92
           SDFV +VYSNA + + ILL    +++R R  PPLT+SI+C+IF LG ISC  Q  L+VGI
Sbjct: 2   SDFVFVVYSNALS-VPILLFCCLLFHRRRFPPPLTLSILCRIFILGFISCSTQMFLFVGI 60

Query: 93  GYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKG 152
            YSSPTL+SA+ DL PAFTFILA+ISRMEKLDL+  S  AK IGT+VSI GAL VT+YKG
Sbjct: 61  RYSSPTLASAMTDLVPAFTFILAIISRMEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKG 120

Query: 153 PALVSMSSSSNLHNE-LRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATF 211
           P +   SS+  + +E LRS   NW+IGG +LA  +  ++L Y+VQTSIIR+YP ELM TF
Sbjct: 121 PQIAFASSTFKILDENLRSQISNWVIGGFLLAISAVSIALFYVVQTSIIRDYPAELMLTF 180

Query: 212 ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV 271
           IC +FVT+QS++V+LIAER+P++WRLKPD ELIA+G SA   +A R  AH W  HKKGPV
Sbjct: 181 ICHIFVTMQSSIVSLIAERDPSAWRLKPDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPV 240

Query: 272 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDID 331
           +V+M+KP+ IV A++MGVT LGD L+LGSV+GA I+AFGFY+V+WG+++EE  I+D    
Sbjct: 241 FVAMFKPVAIVIAVVMGVTFLGDVLHLGSVIGAAIIAFGFYTVMWGKAKEE--IEDMTTS 298

Query: 332 SLKSSSPKAPLLQTKS 347
            + SSS K PLLQ KS
Sbjct: 299 GIDSSSHKDPLLQNKS 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|372477640|gb|AEX97055.1| auxin-induced nodulin [Copaifera officinalis]

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 187/349 (53%), Positives = 258/349 (73%), Gaps = 5/349 (1%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           M  VGVT+VMVAV+  EVG +T+ K+A   G S+FV +VYSN F A+ IL+PS+ +Y+R 
Sbjct: 1   MQGVGVTSVMVAVQFAEVGVNTMIKSANTNGMSNFVYVVYSN-FLALCILVPSSLLYHRK 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRM 120
           +  PPLTVSI+C++F +G  +   QT +Y GIGYSSPTLS + VDL PAFTF++A++SRM
Sbjct: 60  KAAPPLTVSIVCRMFLVGFFASSAQTLMYTGIGYSSPTLSCSQVDLIPAFTFLIAVVSRM 119

Query: 121 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGL 180
           E L+ +++ S AK +GT+VSI GAL VTLYKG   + ++ +  LH  LRSP+ NW++GGL
Sbjct: 120 ENLNPKLKGSQAKMVGTVVSITGALIVTLYKG---LPLTGAYQLHETLRSPKSNWLLGGL 176

Query: 181 VLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPD 240
           +LA  S   S + ++QT II+EYP EL+ T I C F  I ST++A+IAE+NP +W L  D
Sbjct: 177 LLAVASLGNSFVLVIQTWIIKEYPTELVVTTISCGFAVIVSTIIAVIAEKNPKAWSLHLD 236

Query: 241 TELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGS 300
            EL+AI   A F V++RS+  TWAC KKGP+YV+M+ PLG+V A+ MG   LGD LYLGS
Sbjct: 237 MELLAIIFCAIFVVSIRSVVQTWACRKKGPLYVAMFNPLGMVIAVGMGFIFLGDALYLGS 296

Query: 301 VVGATIVAFGFYSVIWGQSEEEKMIDDKD-IDSLKSSSPKAPLLQTKSI 348
           ++GA ++A GFY+V+WG+++EEKM+D+K+ + SL SSS   PLLQ K+I
Sbjct: 297 IIGAGVIAVGFYAVLWGKAQEEKMLDEKNGMGSLHSSSSSTPLLQNKNI 345

Source: Copaifera officinalis

Species: Copaifera officinalis

Genus: Copaifera

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502006|ref|XP_003519813.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  360 bits (923), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 192/346 (55%), Positives = 248/346 (71%), Gaps = 6/346 (1%)

Query: 4   VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
           V V+A MVA   LEVG +TL KAA   G S+FV IVYSN F A+F L+PSTF+Y+R R  
Sbjct: 6   VSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSN-FLALFFLIPSTFLYHRKRAP 64

Query: 64  PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKL 123
           PP+  SI+ +IF L  +S  VQT  Y GI YSSPTL+SA+ DL PAFTFI A+ISRME L
Sbjct: 65  PPIPSSILWRIFLLCCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMENL 124

Query: 124 DLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL----HNELRSPQKNWIIGG 179
           +L+++SS AK IGT++SIAGAL +TLYKG  L   SS  NL         S Q +WIIGG
Sbjct: 125 NLKLRSSHAKIIGTVISIAGALIITLYKGMPLTG-SSMRNLVLGGSEAYLSVQLDWIIGG 183

Query: 180 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 239
            +LA  S  LS+L+IVQT II++YPEEL+ T ICC  V I ST+VAL AE NP +W LK 
Sbjct: 184 FLLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAWILKS 243

Query: 240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 299
           + ELIA+  SA F V++RS+ +TWA  KKGPVYV+M+ PLG+V AI MGV  LG++LYLG
Sbjct: 244 NKELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESLYLG 303

Query: 300 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQT 345
           S++GA  +  GFY+V+W Q+++EK++++K+ +    +S  APLL T
Sbjct: 304 SMIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSAPLLST 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507862|gb|AFK41997.1| unknown [Lotus japonicus]

 Score =  347 bits (889), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 240/349 (68%), Gaps = 14/349 (4%)

Query: 4   VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
           V VT  MVA + LEVG +TL K+A + G S++V IVYSN  A  F LLP+T +++R    
Sbjct: 6   VTVTTAMVATQLLEVGLNTLVKSATDSGLSNYVFIVYSNLLALCF-LLPATILHHRKSAP 64

Query: 64  PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKL 123
           PP+  SI+ +IF L  +S  VQT LY GIGYSSPTL+SA++DL PAFTF LA+ISRME L
Sbjct: 65  PPIPSSILRRIFLLSCLSTAVQTLLYNGIGYSSPTLASAMIDLVPAFTFTLAVISRMENL 124

Query: 124 DLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL----HNELRSPQKNWIIGG 179
           +L++ SS AK +GT+VSIAGAL +TLY+G  ++   S  NL         S Q NWI+GG
Sbjct: 125 NLKLHSSQAKIVGTLVSIAGALILTLYQGMPIIR-GSMQNLVLGGSGTYLSVQSNWILGG 183

Query: 180 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 239
            +LA   F +S+LYIVQT I+REYPEEL+ T +CC  V + S +V LIAE    +W L+P
Sbjct: 184 FLLATACFIVSVLYIVQTWIMREYPEELVVTTVCCSMVVVLSAIVGLIAEGTSRAWILRP 243

Query: 240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 299
           D EL+A+  SA F V +RS+ + WA  KKGP+YV+M+ PLG+V A+++GV  LGD LYLG
Sbjct: 244 DKELVAVCYSAIFVVTMRSVVYAWAFRKKGPIYVAMFSPLGMVIAVVLGVLFLGDILYLG 303

Query: 300 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSI 348
           S++GA I+A GFY VIW Q++EE        +   SSS  APL+ +K I
Sbjct: 304 SLIGAVIIAIGFYGVIWAQAQEE--------NDFASSSSSAPLIYSKGI 344

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.880	0.844	0.474	9.6e-73
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.872	0.884	0.465	1.3e-66
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.892	0.848	0.462	3.6e-66
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.849	0.882	0.441	1e-61
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.892	0.884	0.402	5e-60
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.892	0.889	0.405	2.7e-59
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.892	0.872	0.405	5.1e-58
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.892	0.877	0.386	4.2e-56
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.872	0.807	0.346	2.6e-47
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.872	0.763	0.327	4.2e-47

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 150/316 (47%), Positives = 209/316 (66%)

Query:     6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPP 65
             VTA+++ +EC  VG +TL KAA  KG S  V IVYS   AA+ +LLPS F  +R+RT PP
Sbjct:    13 VTALVI-MECANVGLNTLFKAATLKGMSFHVFIVYSYGLAAL-LLLPSLFCSFRSRTLPP 70

Query:    66 LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDL 125
             +  SI+ KI  LG+I CC     Y GI YSSPTL+SAI +LTPAFTF+LA++ RME +  
Sbjct:    71 MNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSF 130

Query:   126 RVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-NLHNELRSPQKNWIIGGLVLAA 184
             +  SS+AK +GT+VSI GA  VTLY GP +++ S  S +L ++  +P  NWI+G   LA 
Sbjct:   131 KRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNP--NWILGAGFLAV 188

Query:   185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDTEL 243
               F + L YIVQT I+REYP E        + V+  + +V L  E N   +W++KP+  L
Sbjct:   189 EYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIAL 248

Query:   244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
             ++I CS  F   + +  HTWA   KGP++V+M+KPL I  A+ MGV  L D+LY+GS++G
Sbjct:   249 VSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIG 308

Query:   304 ATIVAFGFYSVIWGQS 319
             AT++  GFY+V+WG++
Sbjct:   309 ATVITIGFYTVMWGKA 324

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 147/316 (46%), Positives = 204/316 (64%)

Query:     4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
             V  TA M+A+EC  VGSS L KAA  +G S +V + Y+   A + +LL S  I+ R+R+ 
Sbjct:    16 VPFTA-MIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLS-LIFGRSRSL 73

Query:    64 PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKL 123
             P    S+  KIF L L+    +     GI YSSPTLSSAI +LTPAFTFILA+  RME++
Sbjct:    74 PTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQV 133

Query:   124 DLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLA 183
              LR  ++ AK IGT+VSI+GAL + LYKGP L+  +S ++        + +WIIGGL+L 
Sbjct:   134 MLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF-------ESSWIIGGLLLG 186

Query:   184 AGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTEL 243
                  LS+ +I+QT I+  YPEE+   F   +  T+ S  V L+ E++ NSW+LKP   L
Sbjct:   187 LQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSL 246

Query:   244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
              ++  S  F  +L S+ HTW  H KGPVY+S++KPL I  A+ M    LGDTL+LGSV+G
Sbjct:   247 ASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIG 306

Query:   304 ATIVAFGFYSVIWGQS 319
             + I++FGFY+VIWG++
Sbjct:   307 SVILSFGFYTVIWGKA 322

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 149/322 (46%), Positives = 205/322 (63%)

Query:     4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
             V  TA MVAVEC+ VGS+TL KAA  +G S +V + Y+   A + +LLP + I+ R++  
Sbjct:    20 VPFTA-MVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATL-VLLPLSLIFGRSKRL 77

Query:    64 PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKL 123
             P     +   IF L L+          GI YSSPTL+SAI +LTPAFTF LA+I RME++
Sbjct:    78 PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQI 137

Query:   124 DLRVQSSLAKSIGTMVSIAGALTVTLYKGP------ALVSMSSSSNLHNELRSPQKNWII 177
              LR  ++ AK IGT+VSI+GAL V LYKGP      +L   S + +L+  L S   +WII
Sbjct:   138 VLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWII 197

Query:   178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRL 237
             GGL+LA     +S+ YI+QT ++  YPEE+   F+  +  T+ S  V L AE++ NS+ L
Sbjct:   198 GGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFIL 257

Query:   238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 297
             KP   L ++  S     +  S+ HTW  H KGPVY+S++KPL IV A+ MGV  LGD LY
Sbjct:   258 KPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALY 317

Query:   298 LGSVVGATIVAFGFYSVIWGQS 319
             LGSV+G+ I++ GFY+VIWG++
Sbjct:   318 LGSVIGSLILSLGFYTVIWGKA 339

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 139/315 (44%), Positives = 197/315 (62%)

Query:     6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPP 65
             +   MV  E   VG +TL KAA +KG S FV++VYS  F ++ +LLP TF  +R+R+ PP
Sbjct:    13 ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSL-LLLPLTFFSFRSRSLPP 71

Query:    66 LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDL 125
             LT SI+C +  LGLI+   Q   Y GI YSSPTLSSA+ ++ PAFTFILA++ RME + L
Sbjct:    72 LTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISL 131

Query:   126 RVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAG 185
               +SS+AK +GT++SI GAL VTLY GP L  MSS S+           WIIGG +LA  
Sbjct:   132 GKKSSVAKVLGTILSIIGALVVTLYHGPML--MSSHSD-----------WIIGGGLLALQ 178

Query:   186 SFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELI 244
                +S+ Y+V    +  YP  ++ T +  V + +    V+L+AE+ NP +W ++ D  LI
Sbjct:   179 YILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLI 238

Query:   245 AIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGA 304
              +  +         + HTWA   KGPVY+SM+KPL I+ A +     LG++LYLGSV+G 
Sbjct:   239 TVVATGILNSGYYVI-HTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGG 297

Query:   305 TIVAFGFYSVIWGQS 319
              +++ GFY V+WG++
Sbjct:   298 ILISIGFYMVLWGKA 312

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 130/323 (40%), Positives = 201/323 (62%)

Query:     3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT 62
             +V +TA M+A E   V  +TL KAA +KG + +  ++YS    +I +LLPS    YR+R+
Sbjct:    11 AVLLTA-MLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSI-VLLPSHIFSYRSRS 68

Query:    63 RPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEK 122
              P L++SI+CKI  LGL+        ++GI YS+PTL+SAI ++ PA TFILA+I RMEK
Sbjct:    69 LPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEK 128

Query:   123 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-----NLHNELRSPQKNWII 177
                + +SS+AK +GT+VS+ GAL V LY GP + + SS        L   L S   +WII
Sbjct:   129 ASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDWII 188

Query:   178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWR 236
             GG +LA     + + +I+Q  I++ YP     +F   +  +I ++++ ++AE+N P+ W 
Sbjct:   189 GGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWI 248

Query:   237 LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTL 296
             +  D  L+ I     F     ++ H WA   KGPVY+++++PL I+ A+IMG   LGD+ 
Sbjct:   249 IHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSF 307

Query:   297 YLGSVVGATIVAFGFYSVIWGQS 319
             YLGS+VG  +++ GFY+V+WG++
Sbjct:   308 YLGSLVGGILISLGFYTVMWGKA 330

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 131/323 (40%), Positives = 202/323 (62%)

Query:     3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT 62
             +V +TA M+A E   VG STL K A +KG + +  + YS   A++ +LLPS F   R+R+
Sbjct:    12 AVFLTA-MLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASL-LLLPSLFFTDRSRS 69

Query:    63 RPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEK 122
              PPL++SI+ KI  LGL+        Y+GI YSSPTL+SAI ++TPA TFILA+I RMEK
Sbjct:    70 LPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEK 129

Query:   123 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-----NLHNELRSPQKNWII 177
             +  + +SS+AK +GT++S+ GAL V LY GP +   SS        L   L S   +W+I
Sbjct:   130 VSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWLI 189

Query:   178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWR 236
             GG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++++ L+ E+N P+ W 
Sbjct:   190 GGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWI 249

Query:   237 LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTL 296
             ++ D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++M    L D+L
Sbjct:   250 IRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSL 308

Query:   297 YLGSVVGATIVAFGFYSVIWGQS 319
             YLG ++G  ++  GFY+V+WG++
Sbjct:   309 YLGCLIGGLLITLGFYAVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 131/323 (40%), Positives = 199/323 (61%)

Query:     3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT 62
             +V +TA++V VE   VG STL K A +KG + +  + YS   A++ +LLPS F   R+ +
Sbjct:    15 AVFLTAMLV-VETSVVGISTLFKFATSKGLNIYPFLGYSYLLASL-LLLPSLFFTNRSSS 72

Query:    63 RPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEK 122
              PPL+VSI+ KI  LG +        Y+GI YSSPTL+SAI ++TPA TFILA+I RMEK
Sbjct:    73 LPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEK 132

Query:   123 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS--NLHN---ELRSPQKNWII 177
             +  + +SSLAK +GT++S+ GAL V  Y GP +   SS    N       L S   +W+I
Sbjct:   133 VSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLI 192

Query:   178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWR 236
             GG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++ + L+ E+N P+ W 
Sbjct:   193 GGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWI 252

Query:   237 LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTL 296
             +  D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L D+L
Sbjct:   253 IHFDITLITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSL 311

Query:   297 YLGSVVGATIVAFGFYSVIWGQS 319
             YLG ++G  ++  GFY+V+WG++
Sbjct:   312 YLGCLIGGILITLGFYAVMWGKA 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 125/323 (38%), Positives = 199/323 (61%)

Query:     3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT 62
             +V +TA M+A E   VG STL K A +KG + +  + YS   A++ +LLPS F   R+R+
Sbjct:    12 AVFLTA-MLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASL-LLLPSLFFTNRSRS 69

Query:    63 RPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEK 122
              PPL+ SI+ KI  LG +         +GI YS+PTL+SAI ++ PA TFILA+I RMEK
Sbjct:    70 LPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEK 129

Query:   123 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKNWII 177
             +  + +SS+AK +GT++S+ GA  V  Y GP +   SS   L+    SP     + +W+I
Sbjct:   130 VSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLI 189

Query:   178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWR 236
             GG +L     F+S+ +I+QT I+REYPE    + +  + ++I ++++ L+ E+N P+ W 
Sbjct:   190 GGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWI 249

Query:   237 LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTL 296
             +  D  L  I  +     ++  + H+WA   K P+Y++++KPL I+ A++MG   L D+L
Sbjct:   250 IHFDITLFTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSL 308

Query:   297 YLGSVVGATIVAFGFYSVIWGQS 319
             YLG ++G  ++  GFY V+WG++
Sbjct:   309 YLGCLIGGILITLGFYVVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 108/312 (34%), Positives = 176/312 (56%)

Query:    10 MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
             MV ++    G   L+KA +NKG S++VL+VY +A A I ++ P  F Y+  + RP +T+ 
Sbjct:    19 MVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATI-VMAPFAF-YFDKKVRPKMTLM 76

Query:    70 IICKIFGLGLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQ 128
             I  KI  LGL+   + Q   Y+G+ Y++ T ++A+ ++ PA TF+LA I  +E++ LR  
Sbjct:    77 IFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCI 136

Query:   129 SSLAKSIGTMVSIAGALTVTLYKGPAL-VSMSSSSNLHNELRSPQKNWIIGGLVLAAGSF 187
              S  K +GT+ ++ GA+ +TL KGP L +  +   + HN   +   + I G +++  G F
Sbjct:   137 RSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAVLVTIGCF 196

Query:   188 FLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAI 246
               +   I+Q   +R YP EL  T   C+  TI+ T VAL+ E+ NP++W +  DT+L+  
Sbjct:   197 SYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTA 256

Query:   247 GCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATI 306
               S     AL           +GPV+V+ + PL ++   IM   +  + +YLG V+GA +
Sbjct:   257 TYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVV 316

Query:   307 VAFGFYSVIWGQ 318
             +  G Y VIWG+
Sbjct:   317 ICAGLYLVIWGK 328

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 105/321 (32%), Positives = 184/321 (57%)

Query:    10 MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
             M++++    G + + K ++N G S +VL+VY +A A   ++ P  F + R + +P +T S
Sbjct:    22 MISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATA-VIAPFAFFFER-KAQPKITFS 79

Query:    70 IICKIFGLGLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQ 128
             I  ++F LGL+   + Q   Y+G+ Y+SPT S A+ ++ PA TFILA++ RME LDL+  
Sbjct:    80 IFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKL 139

Query:   129 SSLAKSIGTMVSIAGALTVTLYKGPAL---------VSMSSSSNLHNELRSPQ-KNWIIG 178
                AK  GT+V++AGA+ +T+YKGP +         +  SS +N  +   S   K ++ G
Sbjct:   140 WCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKG 199

Query:   179 GLVLAAGSFFLSLLYIVQTSIIREYPE-ELMATFICCVFVTIQSTVVALIAERNPNSWRL 237
              ++L   +   + L+++Q  I++ Y + +L  T + C   T+Q+  V  + E NP++WR+
Sbjct:   200 SILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRI 259

Query:   238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 297
               D  L+A   S   A ++          K+GPV+ + + PL +V   +MG  +L + ++
Sbjct:   260 GWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIF 319

Query:   298 LGSVVGATIVAFGFYSVIWGQ 318
             LG V+GA ++  G Y+V+WG+
Sbjct:   320 LGGVIGAVLIVIGLYAVLWGK 340

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.4584	0.9403	0.8994	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028877001 SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (350 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	352
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	4e-75
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-06

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  235 bits (601), Expect = 4e-75
 Identities = 137/340 (40%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A E   VG STL K A +KG + +  + YS   A++ +LLPS F   R+R+ PPL+VS
Sbjct: 18  MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASL-LLLPSLFFTNRSRSLPPLSVS 76

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQS 129
           I+ KI  LG +        Y+GI YS+PTL+SAI ++TPA TFILA+I RMEK+  + +S
Sbjct: 77  ILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 130 SLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKNWIIGGLVLAA 184
           S+AK +GT++S+ GAL V  Y GP +   SS   L+    SP       +W+IGG +L  
Sbjct: 137 SVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 185 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTEL 243
              F+S+ +I+Q  I+ EYP     +F+  V V+I ++++ L+ E+ NP+ W +  D  L
Sbjct: 197 QGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL 256

Query: 244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 303
           I I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L D+LYLG ++G
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315

Query: 304 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 343
             ++  GFY+V+WG++ EE     KD     S   K PLL
Sbjct: 316 GILITLGFYAVMWGKANEE-----KDQLLSFSGKEKTPLL 350

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 47.2 bits (112), Expect = 6e-06
 Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 29/297 (9%)

Query: 23  LNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS- 81
           L+  A+          +++ A   +   L    +           +     +  L L+  
Sbjct: 21  LSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGL 80

Query: 82  CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSI 141
                 L++ + Y+S +++S I+ L P FT +LA++       L  + SL + +G ++++
Sbjct: 81  ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL-----LGERLSLLQILGILLAL 135

Query: 142 AGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR 201
           AG L + L  G   +                    + GL+LA  +  L  LY      + 
Sbjct: 136 AGVLLILLGGGGGGIL------------------SLLGLLLALAAALLWALYTALVKRLS 177

Query: 202 EYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH 261
                 +A  +  +   +   +  L     P   R       + +     F+  L  L  
Sbjct: 178 RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSR-----AWLLLLYLGVFSTGLAYLLW 232

Query: 262 TWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ 318
            +A    G   V++   L  VFA ++GV LLG+ L    ++GA +V  G        
Sbjct: 233 YYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRA 289

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	352
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.9
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.88
COG2962	293	RarD Predicted permeases [General function predict	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.84
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.8
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
KOG2766	336	consensus Predicted membrane protein [Function unk	99.71
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.63
KOG1580	337	consensus UDP-galactose transporter related protei	99.6
COG2510	140	Predicted membrane protein [Function unknown]	99.6
COG2510	140	Predicted membrane protein [Function unknown]	99.57
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.51
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.44
KOG1581	327	consensus UDP-galactose transporter related protei	99.3
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.22
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.21
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.18
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.18
PRK15430	296	putative chloramphenical resistance permease RarD;	99.07
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.06
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.06
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.06
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.04
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.04
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.01
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.0
PRK13499	345	rhamnose-proton symporter; Provisional	98.95
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.94
PRK11272	292	putative DMT superfamily transporter inner membran	98.91
PLN00411	358	nodulin MtN21 family protein; Provisional	98.85
PRK11689	295	aromatic amino acid exporter; Provisional	98.83
KOG1582	367	consensus UDP-galactose transporter related protei	98.82
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.73
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.72
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.68
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.65
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.64
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.58
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.55
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.38
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.37
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.35
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.31
COG2962	293	RarD Predicted permeases [General function predict	98.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.19
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.19
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.09
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.03
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.02
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.0
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.74
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.66
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.53
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.48
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.38
COG2076	106	EmrE Membrane transporters of cations and cationic	97.26
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.25
PRK13499	345	rhamnose-proton symporter; Provisional	97.2
PRK11431	105	multidrug efflux system protein; Provisional	97.15
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.05
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.02
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.98
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.93
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.9
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.9
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.78
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.76
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.75
PRK11431	105	multidrug efflux system protein; Provisional	96.61
COG2076	106	EmrE Membrane transporters of cations and cationic	96.56
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.23
KOG2765	416	consensus Predicted membrane protein [Function unk	96.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.04
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.84
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.76
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.49
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.2
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.85
KOG1581	327	consensus UDP-galactose transporter related protei	94.49
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.44
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.74
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	93.37
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.46
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.55
KOG1580	337	consensus UDP-galactose transporter related protei	90.99
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.31
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	89.95
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	86.37
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	83.95
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	83.83
KOG4831	125	consensus Unnamed protein [Function unknown]	83.57
PRK02237	109	hypothetical protein; Provisional	81.36
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	81.04

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=3.2e-40  Score=311.51  Aligned_cols=312  Identities=39%  Similarity=0.719  Sum_probs=251.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018663            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         2 ~~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (352)
                      |..++++.++..-++.+...++.|.+++.|++|..+.++|+.+++++ ++++.+.++|+++.++.+++++.++.+.|+++
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~-Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLL-LLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHH-HHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            66799999999999999999999999999999999999999999999 88887665543332445678888999999998


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHH------hhcccceeeccccceeehHHhhhhhhhhhheecCCcc
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALIS------RMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPAL  155 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~------l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~  155 (352)
                      +..+.+++.|++|+++++++++.++.|+++.++++++      +|||++++      +++|++++++|+.++...+++..
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCccc
Confidence            6677899999999999999999999999999999999      69999999      99999999999988875443211


Q ss_pred             ccCC--CCCC-CCCc--cCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcC
Q 018663          156 VSMS--SSSN-LHNE--LRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER  230 (352)
Q Consensus       156 ~~~~--~~~~-~~~~--~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  230 (352)
                      ...+  +..+ .+.+  ...+..+...|++++++|+++||+|++++|+..++++++...+++++.++++...+.....++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~  242 (358)
T PLN00411        163 FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK  242 (358)
T ss_pred             ccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence            0000  0000 0000  001123346699999999999999999999999888775677888888887777766666554


Q ss_pred             C-CCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHh
Q 018663          231 N-PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAF  309 (352)
Q Consensus       231 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~  309 (352)
                      . ...|..........++|.+++ +.++|.+|++++++.||++++++.+++|+++++++++++||++++.+++|+++|+.
T Consensus       243 ~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~  321 (358)
T PLN00411        243 NNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL  321 (358)
T ss_pred             CCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            2 233332222234567788865 67899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccchh
Q 018663          310 GFYSVIWGQSEE  321 (352)
Q Consensus       310 g~~l~~~~~~~~  321 (352)
                      |+++..+.++|+
T Consensus       322 Gv~l~~~~~~~~  333 (358)
T PLN00411        322 GFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHhhhhhh
Confidence            999998765554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=3.8e-33  Score=259.35  Aligned_cols=280  Identities=17%  Similarity=0.160  Sum_probs=220.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   83 (352)
                      +..+++++++++||.+++++|...++ ++|..+.++|++++++. ++++.   +++    +.+++   .....|++. ..
T Consensus         4 ~~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~-l~~~~---~~~----~~~~~---~~~~~g~~~~~~   71 (299)
T PRK11453          4 KDGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFP-AIFFV---ARP----KVPLN---LLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHH-HHHHh---cCC----CCchH---HHHHHHHHHHHH
Confidence            34567889999999999999999976 99999999999998776 65543   111    12222   344456655 55


Q ss_pred             HHHHHHHhhcc-cCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCC
Q 018663           84 VQTCLYVGIGY-SSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS  162 (352)
Q Consensus        84 ~~~~~~~al~~-~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~  162 (352)
                      .+.+++.+++| .++++++++.++.|+++.+++++++|||++.+      +++|++++++|+.++.. ++.         
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~~---------  135 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DSL---------  135 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-ccC---------
Confidence            66678889998 58899999999999999999999999999999      99999999999987762 111         


Q ss_pred             CCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChh--hHHHHHHHHHHHHHHHHHHHhhcCCC---Ccccc
Q 018663          163 NLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEE--LMATFICCVFVTIQSTVVALIAERNP---NSWRL  237 (352)
Q Consensus       163 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~  237 (352)
                             ++......|++++++++++|+.|.+++||..++.+++  .....+.+..+.+.........++..   .++..
T Consensus       136 -------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (299)
T PRK11453        136 -------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT  208 (299)
T ss_pred             -------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence                   1122234799999999999999999999987655432  34445556555554444444343321   11222


Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      .+...|..++|+++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|+++..+.
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            33456889999999999999999999999999999999999999999999999999999999999999999999988776


Q ss_pred             cc
Q 018663          318 QS  319 (352)
Q Consensus       318 ~~  319 (352)
                      ++
T Consensus       289 ~~  290 (299)
T PRK11453        289 LR  290 (299)
T ss_pred             hh
Confidence            54

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=4.3e-33  Score=258.13  Aligned_cols=277  Identities=14%  Similarity=0.145  Sum_probs=231.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHH
Q 018663            7 TAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQ   85 (352)
Q Consensus         7 ~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~   85 (352)
                      .+.+++..++||.+++++|.+.++ ++|..++++|+.+++++ ++++...++++    ..+++++......|.++ ..++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~-ll~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGIL-LLAFLLLRGHP----LPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHH-HHHHHHHhCCC----CCcHHHHHHHHHHHHHHHHHHH
Confidence            466788999999999999999875 99999999999999998 87765443221    22456777888889887 7788


Q ss_pred             HHHHHhh-cccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCC
Q 018663           86 TCLYVGI-GYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL  164 (352)
Q Consensus        86 ~~~~~al-~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  164 (352)
                      .+++.+. ++++++.++++.++.|+++.+++++ +|||++++      +++|++++++|+.++... +.           
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~~-----------  144 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-GN-----------  144 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-cc-----------
Confidence            8999999 9999999999999999999999986 69999999      999999999999877521 11           


Q ss_pred             CCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhh
Q 018663          165 HNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELI  244 (352)
Q Consensus       165 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  244 (352)
                             .+....|++++++|+++||.|.+..||..++. + ...+.+++.++++...+.....+....  ..++...|.
T Consensus       145 -------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  213 (292)
T PRK11272        145 -------LSGNPWGAILILIASASWAFGSVWSSRLPLPV-G-MMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFL  213 (292)
T ss_pred             -------cccchHHHHHHHHHHHHHHHHHHHHHhcCCCc-c-hHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHH
Confidence                   11234799999999999999999999976543 3 566778888888887777654432211  112335688


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          245 AIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      .++++++++++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++.+++++
T Consensus       214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999877544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.5e-32  Score=254.84  Aligned_cols=284  Identities=14%  Similarity=0.089  Sum_probs=214.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-   81 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   81 (352)
                      +.+.+++++++.++||.+++..|..+++ ++|..+.++|+.++.++ +.++.   +++++ ++.++   .. ...+.++ 
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~-l~~~~---~~~~~-~~~~~---~~-~~~~~l~~   71 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLL-LLLTV---GFPRL-RQFPK---RY-LLAGGLLF   71 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHH-HHHHc---ccccc-ccccH---HH-HHHHhHHH
Confidence            5678889999999999999999999877 99999999999999988 77652   11111 22222   22 3334444 


Q ss_pred             HHHHHHHHHhhcc----cCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCcccc
Q 018663           82 CCVQTCLYVGIGY----SSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVS  157 (352)
Q Consensus        82 ~~~~~~~~~al~~----~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~  157 (352)
                      +.++.+++.|++|    +++++++++.++.|+++.+++++++|||++++      ++.|++++++|+.++... +...+.
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~  144 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSL  144 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchh
Confidence            7777788887754    57788899999999999999999999999999      999999999999887632 110000


Q ss_pred             CCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 018663          158 MSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRL  237 (352)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  237 (352)
                      .   +.+     .+......|++++++|+++||.|+++.||..++.++ .....   ..+.+.+.+.... ++.+.  ..
T Consensus       145 ~---~~~-----~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~~~~---~~~~~~l~~~~~~-~~~~~--~~  209 (295)
T PRK11689        145 A---ELI-----NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-ITLFF---ILTALALWIKYFL-SPQPA--MV  209 (295)
T ss_pred             h---hhh-----hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hhHHH---HHHHHHHHHHHHH-hcCcc--cc
Confidence            0   000     001123469999999999999999999999877654 54322   2233333333332 22211  11


Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      .+...|..+++.+ ++++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++..+.
T Consensus       210 ~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        210 FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            2234577777877 489999999999999999999999999999999999999999999999999999999999887664


Q ss_pred             cc
Q 018663          318 QS  319 (352)
Q Consensus       318 ~~  319 (352)
                      ++
T Consensus       289 ~~  290 (295)
T PRK11689        289 TR  290 (295)
T ss_pred             Hh
Confidence            43

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.1e-31  Score=246.93  Aligned_cols=279  Identities=10%  Similarity=0.005  Sum_probs=222.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISC   82 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (352)
                      ..+++..+++++++|+.++.+.|++.++ .+|..+.++|+++++++ ++++..  +++   ++.+++++......|++..
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~-l~~~~~--~~~---~~~~~~~~~~~~~~g~~~~   82 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLI-LIAIFK--PWR---LRFAKEQRLPLLFYGVSLG   82 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHH-HHHHHh--HHh---ccCCHHHHHHHHHHHHHHH
Confidence            4578999999999999999999999987 99999999999999988 776532  111   1234567777788888777


Q ss_pred             HHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCC
Q 018663           83 CVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS  162 (352)
Q Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~  162 (352)
                      ..+.++++|++|++++.++++..+.|+++.+++.    ||+.        +..++.++++|+.++. ..+.+        
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~~~--------  141 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLGQD--------  141 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecCCC--------
Confidence            7788899999999999999999999999998873    5544        3445678899997765 22211        


Q ss_pred             CCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcch
Q 018663          163 NLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTE  242 (352)
Q Consensus       163 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  242 (352)
                              .+.....|++++++++++||.|.+..||..++.+. ... .+...++++++.+.....++. ..   .+...
T Consensus       142 --------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~-~~---~~~~~  207 (293)
T PRK10532        142 --------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHGP-ATV-AIGSLIAALIFVPIGALQAGE-AL---WHWSI  207 (293)
T ss_pred             --------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hHH-HHHHHHHHHHHHHHHHHccCc-cc---CCHHH
Confidence                    11223579999999999999999999999877664 555 456677777777665543321 11   12223


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhh
Q 018663          243 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEE  322 (352)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~  322 (352)
                      |...+++++++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+....+..+|+.
T Consensus       208 ~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        208 LPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            55667999999999999999999999999999999999999999999999999999999999999999999877655443


Q ss_pred             h
Q 018663          323 K  323 (352)
Q Consensus       323 ~  323 (352)
                      |
T Consensus       288 ~  288 (293)
T PRK10532        288 K  288 (293)
T ss_pred             C
Confidence            3

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=2.4e-31  Score=246.86  Aligned_cols=280  Identities=12%  Similarity=0.059  Sum_probs=209.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCC-CC-CCCHHHHHHHHHHHH
Q 018663            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT-RP-PLTVSIICKIFGLGL   79 (352)
Q Consensus         2 ~~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~-~~-~~~~~~~~~~~~~g~   79 (352)
                      +..|+++.+++++++||..++..|.. .+ ++|.++.++|++++.++ +.++...+++... .+ ..+++.+.. ...+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFF-MVVLMSICRQWSYLKTLIQTPQKIFM-LAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHH-HHHHHHHHccHHHHHHHHcCHHHHHH-HHHHH
Confidence            45689999999999999999999985 44 99999999999999887 7766544322110 01 113444433 33555


Q ss_pred             HH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccC
Q 018663           80 IS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSM  158 (352)
Q Consensus        80 ~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~  158 (352)
                      ++ +.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++.|++++++|+.++.. +.      
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~-~~------  147 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW-TF------  147 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH-Hc------
Confidence            55 889999999999999999999999999999999999999999999      99999999999988762 11      


Q ss_pred             CCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCC-hhhHHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Q 018663          159 SSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIAERNPNSWRL  237 (352)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  237 (352)
                                  ++ .    ..++++++++||.|.+..|+..++.. .....+.+.+.++.+...+.   .......+..
T Consensus       148 ------------~~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  207 (296)
T PRK15430        148 ------------GS-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQ  207 (296)
T ss_pred             ------------CC-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccC
Confidence                        01 1    14688899999999999998754321 11333445555554432221   1111111211


Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          238 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      .+ ..+....+.+.+.+.++|.+|++++|+.|+++++.+.+++|+++.+++++++||++++.+++|+++|++|+.+...+
T Consensus       208 ~~-~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        208 NP-MSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            11 22233444333478899999999999999999999999999999999999999999999999999999888887654


Q ss_pred             cc
Q 018663          318 QS  319 (352)
Q Consensus       318 ~~  319 (352)
                      ..
T Consensus       287 ~~  288 (296)
T PRK15430        287 AI  288 (296)
T ss_pred             HH
Confidence            43

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=4.9e-31  Score=240.21  Aligned_cols=257  Identities=14%  Similarity=0.146  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhccc
Q 018663           17 EVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQTCLYVGIGYS   95 (352)
Q Consensus        17 wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~   95 (352)
                      ||.+++..|..++++.|+....+.|++.+.++ +.+....  +  +    +++++.+....|.++ ..++.+++.|++|+
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~-l~~~~~~--~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLL-LLPLLRR--R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHh--c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            89999999999877789999999999988887 7665322  1  1    224556777888887 99999999999999


Q ss_pred             CcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcc
Q 018663           96 SPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNW  175 (352)
Q Consensus        96 ~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (352)
                      ++++++++.++.|+++.+++++++|||++++      +++|+.++++|++++.. ++                  +.+..
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~------------------~~~~~  126 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG------------------NLSIN  126 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC------------------ccccc
Confidence            9999999999999999999999999999999      99999999999988762 11                  12234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhcCCh-hhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHH
Q 018663          176 IIGGLVLAAGSFFLSLLYIVQTSIIREYPE-ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAV  254 (352)
Q Consensus       176 ~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (352)
                      ..|+.++++++++|+.+.+..|+..++.+. +.....+++..+.+++.+.....++. ..   .+...|..+.+.+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQ---ALSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CC---cchHHHHHHHHHHHHHH
Confidence            689999999999999999999999877653 24555577888888888877654322 11   13346777889999999


Q ss_pred             HHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhh
Q 018663          255 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGF  311 (352)
Q Consensus       255 ~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~  311 (352)
                      +++|.+|++++++.++.+++.+.+++|+++++++++++||++++.+++|.++++.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=7.4e-30  Score=237.68  Aligned_cols=276  Identities=12%  Similarity=0.078  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018663           16 LEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYS   95 (352)
Q Consensus        16 ~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~   95 (352)
                      +-....+.+|.++++...|....+.|+..+.+. +.+... .+.+++ ++.+++++++.+..|++++....+.+.|++|+
T Consensus        13 ~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~   89 (302)
T TIGR00817        13 LNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLY-CLLSWS-SGLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKV   89 (302)
T ss_pred             HHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH-HHHHHH-hCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            333444589999976577999999999888776 555421 111222 45678899999999999988899999999999


Q ss_pred             CcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcc
Q 018663           96 SPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNW  175 (352)
Q Consensus        96 ~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (352)
                      +++.++++.++.|+++.+++++++|||++.+      ++.|++++++|+.+..   ..                 +.+..
T Consensus        90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~-----------------~~~~~  143 (302)
T TIGR00817        90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DT-----------------ELSFN  143 (302)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CC-----------------ccccc
Confidence            9999999999999999999999999999999      9999999999997543   11                 11233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhh--cCChhhHHHHHHHHHHHHHHHHHHHhhcCCCC---ccccC----Cc-chhhH
Q 018663          176 IIGGLVLAAGSFFLSLLYIVQTSIIR--EYPEELMATFICCVFVTIQSTVVALIAERNPN---SWRLK----PD-TELIA  245 (352)
Q Consensus       176 ~~G~~~~l~aa~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~----~~-~~~~~  245 (352)
                      ..|++++++|+++|++|.+..||..+  +.++ .+.+.+++..+++.++|.....++...   ++...    .. ..+..
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            57999999999999999999999887  6665 899999999999999998876553211   11110    00 01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchh
Q 018663          246 IGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  321 (352)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~  321 (352)
                      .++.+..+....+.++++++++.+|+++++..+++|+++++++++++||++++.+++|.++++.|++++++.|+||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~  298 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK  298 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence            2222222333333466689999999999999999999999999999999999999999999999999998754433

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.3e-27  Score=221.46  Aligned_cols=297  Identities=16%  Similarity=0.187  Sum_probs=230.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~~~~-~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (352)
                      ..++-=+.+++-..+...+..+.+.|.+ |..-.++-+..-.++ ..++...++++++..+.-+++++++++.+++...+
T Consensus        14 ~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~v-y~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~a   92 (334)
T PF06027_consen   14 VLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALV-YTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEA   92 (334)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHH-HhhhhhhccccccchhhcchhHHHHHHHHHHHHHH
Confidence            3344445677777888888888776655 555555555554444 55554443332111222346678889999999999


Q ss_pred             HHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCC
Q 018663           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL  164 (352)
Q Consensus        85 ~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  164 (352)
                      +.+.+.|++|++.+.++++.+++-+++.+++++++|+|+++.      +++|+++++.|++++...+....+.       
T Consensus        93 N~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~-------  159 (334)
T PF06027_consen   93 NYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD-------  159 (334)
T ss_pred             HHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc-------
Confidence            999999999999999999999999999999999999999999      9999999999998887554322110       


Q ss_pred             CCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCC-CccccCCcchh
Q 018663          165 HNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDTEL  243 (352)
Q Consensus       165 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~  243 (352)
                          +.++++..+||+++++|+++||+++++.++..++.+. .+...+..++|.++..+...++|... ...+..  ...
T Consensus       160 ----~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~-~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~--~~~  232 (334)
T PF06027_consen  160 ----SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPR-VEFLGMLGLFGFIISGIQLAILERSGIESIHWT--SQV  232 (334)
T ss_pred             ----CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHHHHHHHHHHHHheehhhhhccCCC--hhh
Confidence                0245678899999999999999999999999999875 88889999999999988887776542 111111  122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhh
Q 018663          244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  323 (352)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~  323 (352)
                      ........++....|.+....++..+|+..++...+..+++++++++++|+++++..++|.++|++|+++++..+++..+
T Consensus       233 ~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  233 IGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            22223334466778888889999999999999999999999999999999999999999999999999999887665443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=2.4e-27  Score=218.49  Aligned_cols=274  Identities=15%  Similarity=0.138  Sum_probs=203.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhh-ccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018663            7 TAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYY-RNRTRPPLTVSIICKIFGLGLISCCVQ   85 (352)
Q Consensus         7 ~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (352)
                      .++.++++++|+...+..|...++ .++.  .+++.....+. +.|+...+. ++.+ +..+++.+...+..+..+..++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~-l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVL-LTPYGLWYLAQVGW-SRLPATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHH-HHHHHHHhcccCCC-CCcchhhHHHHHHHHHHHHHHH
Confidence            567889999999999999976655 4443  46677677666 766654432 2222 2233344444455555459999


Q ss_pred             HHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCC
Q 018663           86 TCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLH  165 (352)
Q Consensus        86 ~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~  165 (352)
                      .+++.|+++.+++.++.+.++.|+++.+++++++|||++.+      +++|+.+++.|+.++.. ++.            
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~------------  138 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF------------  138 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc------------
Confidence            99999999999999999999999999999999999999999      99999999999987762 111            


Q ss_pred             CccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChh---hHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcch
Q 018663          166 NELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEE---LMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTE  242 (352)
Q Consensus       166 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  242 (352)
                            ......|+.++++++++|+.|.++.|+..++.++.   .....+.+..+++.+.+.....++.  .+. .+...
T Consensus       139 ------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~  209 (281)
T TIGR03340       139 ------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQ  209 (281)
T ss_pred             ------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHH
Confidence                  11223578899999999999999998875544321   1122233333212222221111211  111 12234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhh
Q 018663          243 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  313 (352)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l  313 (352)
                      +....+.+.++++++|.+|++++++.|+++++.+.+++|+++.+++++++||++++.+++|.++|++|+++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            56778888899999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=7.3e-27  Score=221.25  Aligned_cols=282  Identities=14%  Similarity=0.117  Sum_probs=221.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPL--TVSIICKIFGLGLIS   81 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~-~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   81 (352)
                      +..+..+.-..+-.......|..++. ++ |+.+.++|++++.++ ..+......+ ++ ++.  .+++++..+..|+++
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~-~~~~~~~~~~-~~-~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLF-ALLYWATGFR-KI-PRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHH-HHHHHHhCCC-CC-CCCCCHHHHHHHHHHHHHHH
Confidence            44455555555556677789999987 99 999999999999776 5544322122 12 333  245788999999999


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCC
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSS  161 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~  161 (352)
                      ...+...+.|+++++++.++++.++.|+++++++++++|||++++      ++.++++++.|+.+... .+         
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~-~~---------  188 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV-KE---------  188 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec-cc---------
Confidence            555777889999999999999999999999999999999999999      99999999999988762 11         


Q ss_pred             CCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCC------hhhHHHHHHHHHHHHHHHHHHHhhcCC--CC
Q 018663          162 SNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP------EELMATFICCVFVTIQSTVVALIAERN--PN  233 (352)
Q Consensus       162 ~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~  233 (352)
                                .+....|++++++|+++||+++++.||..++.+      ++.+...++...+.++++|+....|..  ..
T Consensus       189 ----------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~  258 (350)
T PTZ00343        189 ----------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP  258 (350)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence                      122357999999999999999999999886532      235667777889999999987755532  11


Q ss_pred             ccc----cCCcchhhHHHHHHHHHHHHHHHHHHH----HhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHH
Q 018663          234 SWR----LKPDTELIAIGCSAFFAVALRSLAHTW----ACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGAT  305 (352)
Q Consensus       234 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~  305 (352)
                      .+.    ......+..+.+ .++.++++|.+|+.    ++++.+|.+.++...++|+++++++++++||++++.+++|.+
T Consensus       259 ~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~  337 (350)
T PTZ00343        259 VWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMA  337 (350)
T ss_pred             HHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHH
Confidence            111    011112233444 45678999999995    999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhcc
Q 018663          306 IVAFGFYSVIWG  317 (352)
Q Consensus       306 lii~g~~l~~~~  317 (352)
                      +++.|++++++.
T Consensus       338 lii~Gv~lYs~~  349 (350)
T PTZ00343        338 VAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHhhc
Confidence            999999998765

>TIGR00688 rarD rarD protein

Probab=99.94  E-value=9.1e-26  Score=205.25  Aligned_cols=249  Identities=10%  Similarity=0.012  Sum_probs=183.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccC----CCCCCCH-HHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNR----TRPPLTV-SIICKIFGLGL   79 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~----~~~~~~~-~~~~~~~~~g~   79 (352)
                      |+++.+++++++||.++++.|. ..+ ++|.+++++|++++.++ ++++...++++.    +.++.++ +.+......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPF-MLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHH-HHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            5889999999999999999998 445 99999999999999888 776553433210    1011112 23445677777


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCC
Q 018663           80 ISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMS  159 (352)
Q Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~  159 (352)
                      +.+.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++.|++++++|+.++.. .+       
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~-~~-------  144 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV-LK-------  144 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH-Hc-------
Confidence            77899999999999999999999999999999999999999999999      99999999999987752 11       


Q ss_pred             CCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 018663          160 SSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP  239 (352)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  239 (352)
                                 ++.     ...+++++++||.|.+..|+..++ +. ....... ....+...+... ..+........+
T Consensus       145 -----------~~~-----~~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~  204 (256)
T TIGR00688       145 -----------GSL-----PWEALVLAFSFTAYGLIRKALKNT-DL-AGFCLET-LSLMPVAIYYLL-QTDFATVQQTNP  204 (256)
T ss_pred             -----------CCc-----hHHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHHH-HHHHHHHHHHHH-HhccCcccccCc
Confidence                       011     135788999999999999997653 22 2222211 111112111111 111111111112


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHH
Q 018663          240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTL  291 (352)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~  291 (352)
                      ...|..+.+.+++ +.++|.+|++++|+.++++++.+.+++|+++++++++.
T Consensus       205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            2357778888875 88999999999999999999999999999999999763

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=5.3e-24  Score=196.09  Aligned_cols=282  Identities=20%  Similarity=0.236  Sum_probs=215.3

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018663            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         2 ~~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (352)
                      +........++..+.|+......|...++..++....+.|.+.+.+. ..+.....+.. + ++..++ +.+....+.+.
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~   79 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALL-LLPLLLLEPRG-L-RPALRP-WLLLLLLALLG   79 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHH-HHHHHHhhccc-c-cccccc-hHHHHHHHHHH
Confidence            34567788888899999999999999865356666666699888776 55443222111 1 111111 34455566666


Q ss_pred             -HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHH-HHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCC
Q 018663           82 -CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILAL-ISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMS  159 (352)
Q Consensus        82 -~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~-~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~  159 (352)
                       ...+.+++.++++++++.++++.++.|+++.++++ +++|||++++      ++.|+.+++.|++++......+     
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~-----  148 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG-----  148 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc-----
Confidence             99999999999999999999999999999999997 7779999999      9999999999998887321110     


Q ss_pred             CCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHH-HHHHHHHHHHHHHHHhhcCCCCccccC
Q 018663          160 SSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATF-ICCVFVTIQSTVVALIAERNPNSWRLK  238 (352)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~  238 (352)
                                 ... ...|+.+++.++++++++.+..|+.. +.++ ..... ++.. +... ........ ..+  ...
T Consensus       149 -----------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~-~~~~-~~~~~~~~-~~~--~~~  209 (292)
T COG0697         149 -----------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLGP-VTLALLLQLL-LALL-LLLLFFLS-GFG--API  209 (292)
T ss_pred             -----------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCh-HHHHHHHHHH-HHHH-HHHHHHhc-ccc--ccC
Confidence                       011 56899999999999999999999988 5443 45544 4443 2221 21112111 111  122


Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          239 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      ....+..+.+.+++++++++.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++++.|+.+...+
T Consensus       210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            2345788889999999999999999999999999999999999999999999999999999999999999999998776

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.90  E-value=1.8e-24  Score=187.86  Aligned_cols=290  Identities=14%  Similarity=0.128  Sum_probs=219.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (352)
                      ++..+..+. .++....++.+..+ + .+|......|.+.-.+. -.|..++++.....|+-.|   .++++.|+.|+.+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~-e-~~p~e~a~~r~l~~mli-t~pcliy~~~~v~gp~g~R---~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVL-E-NDPMELASFRLLVRMLI-TYPCLIYYMQPVIGPEGKR---KWLILRGFMGFTG  110 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhh-c-cChhHhhhhhhhhehhh-hheEEEEEeeeeecCCCcE---EEEEeehhhhhhH
Confidence            344455555 55555555555554 4 78999999997776666 6665544443322233332   4667889999889


Q ss_pred             HHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCC
Q 018663           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL  164 (352)
Q Consensus        85 ~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~  164 (352)
                      ....|+|++|.+-++|+++..++|.+|.+++|.++|||.+..      ...|..+.+.||++++   .+.+-..+..+++
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv---RPpFlFG~~t~g~  181 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV---RPPFLFGDTTEGE  181 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe---cCCcccCCCcccc
Confidence            999999999999999999999999999999999999999999      9999999999999887   2332222111122


Q ss_pred             CCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC-cchh
Q 018663          165 HNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP-DTEL  243 (352)
Q Consensus       165 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~  243 (352)
                      +-   +..+....|.+.++.|+++-|-..++.|+..|+.|. .....|....+++..++.....+    .|..+. ..+|
T Consensus       182 ~~---s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr  253 (346)
T KOG4510|consen  182 DS---SQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDR  253 (346)
T ss_pred             cc---ccccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----ceecCccccce
Confidence            10   123556678899999999999989999999898887 66667777777777666554322    233322 2456


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          244 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      ..++.+|+ ...+++.+.+.++|+..+..++++.+.+.+++.++.++++||.|++.++.|.++|+.+.+.....|.
T Consensus       254 ~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  254 WLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             EEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            66677786 5588999999999999999999999999999999999999999999999999999999888765443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.89  E-value=1.3e-21  Score=169.00  Aligned_cols=276  Identities=13%  Similarity=0.048  Sum_probs=224.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (352)
                      |++.++.+++.--....+.|.+... +++.-.+++|..+++++ ++++.    |..+ ++.+++++......|..-...|
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLI-ll~l~----RPwr-~r~~~~~~~~~~~yGvsLg~MN   85 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALI-LLALF----RPWR-RRLSKPQRLALLAYGVSLGGMN   85 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHH-HHHHh----hHHH-hccChhhhHHHHHHHHHHHHHH
Confidence            6788888888888888999999988 99999999999999998 77653    2222 4567788899999999889999


Q ss_pred             HHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCC
Q 018663           86 TCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLH  165 (352)
Q Consensus        86 ~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~  165 (352)
                      .+||.+++.+|-+.+..+.++-|+....++.--.+            ..+-+.+.+.|..++... ++            
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr~~------------d~vwvaLAvlGi~lL~p~-~~------------  140 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSRRLR------------DFVWVALAVLGIWLLLPL-GQ------------  140 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhccchh------------hHHHHHHHHHHHHhheec-cC------------
Confidence            99999999999999999999999988776542222            334456778888777632 21            


Q ss_pred             CccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhH
Q 018663          166 NELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIA  245 (352)
Q Consensus       166 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (352)
                          +....+..|..+++.++.||+.|.+..||..+..|. .......+.++.++..|+...-.+ + ...  ++.....
T Consensus       141 ----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~ag-~-~l~--~p~ll~l  211 (292)
T COG5006         141 ----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQAG-P-ALF--SPSLLPL  211 (292)
T ss_pred             ----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-chHHHHHHHHHHHHHhhhhhhhcc-h-hhc--ChHHHHH
Confidence                234566799999999999999999999999876666 777888899999999998873221 1 111  1122444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhh
Q 018663          246 IGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEE  322 (352)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~  322 (352)
                      -+..++.++.+.|.+-..++++.++.+.++++.++|.++.+.+++++||++|+.||+|.+.|+.+..-..+..||+.
T Consensus       212 aLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         212 ALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            45678899999999999999999999999999999999999999999999999999999999999887776555544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.88  E-value=2.6e-21  Score=178.83  Aligned_cols=274  Identities=14%  Similarity=0.087  Sum_probs=206.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (352)
                      ++++.++++++||...+..|...  |.++.++.  |..++.++ +..+....++. +  ...++.+..-+..|++...++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~-~~~~~~~~~~~-~--~~~~~~~~~g~l~G~~w~ig~   73 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALI-LSIAIAIFVLP-E--FWALSIFLVGLLSGAFWALGQ   73 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHH-HHHHHHHHhCC-c--ccccHHHHHHHHHHHHHHhhh
Confidence            57889999999999999999865  58888775  77777777 65544443321 1  112455566677777778999


Q ss_pred             HHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccce----eehHHhhhhhhhhhheecCCccccCCC
Q 018663           86 TCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAK----SIGTMVSIAGALTVTLYKGPALVSMSS  160 (352)
Q Consensus        86 ~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~----~ig~~l~~~Gv~ll~~~~~~~~~~~~~  160 (352)
                      .+++.+.++++++.+..+.+ +.|++..+.+.+++|||.+.+      +    ++|+++.++|++++...++++..    
T Consensus        74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----  143 (290)
T TIGR00776        74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----  143 (290)
T ss_pred             hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc----
Confidence            99999999999999999988 899999999999999999999      8    99999999998877532211100    


Q ss_pred             CCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHH---HHHHHHHHHHHHhhcCCCCcccc
Q 018663          161 SSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICC---VFVTIQSTVVALIAERNPNSWRL  237 (352)
Q Consensus       161 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~  237 (352)
                         +     .......+|.++++.|+++|+.|.+..|+.  ++++ .+..+.+.   +.++.+..+...  . . .++  
T Consensus       144 ---~-----~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~--~-~-~~~--  206 (290)
T TIGR00776       144 ---I-----KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVDG-LSVLLPQAIGMVIGGIIFNLGHI--L-A-KPL--  206 (290)
T ss_pred             ---c-----ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCc-ceehhHHHHHHHHHHHHHHHHHh--c-c-cch--
Confidence               0     000233679999999999999999999976  3444 66643333   333333322211  0 0 111  


Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhc-cCCceEEeeccchHHHHHHHHHHHHhCCccchhhh----hhHHHHHhhhh
Q 018663          238 KPDTELIAIGCSAFFAVALRSLAHTWACH-KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFY  312 (352)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~----iG~~lii~g~~  312 (352)
                      .+...+..++ .|++ .+++|.+|..+.+ +.++++++.+.+++|+.+.+++++++||+.++.++    +|.++++.|+.
T Consensus       207 ~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence            1222344444 7776 7999999999999 99999999999999999999999999999999999    99999999998


Q ss_pred             hhhc
Q 018663          313 SVIW  316 (352)
Q Consensus       313 l~~~  316 (352)
                      +...
T Consensus       285 l~~~  288 (290)
T TIGR00776       285 ILGI  288 (290)
T ss_pred             HHhc
Confidence            8654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.86  E-value=8.1e-20  Score=162.10  Aligned_cols=283  Identities=11%  Similarity=0.017  Sum_probs=220.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCC--CCCHHHHHHHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP--PLTVSIICKIFGLGLI   80 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~--~~~~~~~~~~~~~g~~   80 (352)
                      ..||.++.+.+.++||..+...|... + .++.++...|..-+..+ +..+....++.+..+  ..++|.+..+.+.+..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~-~-~~~~eIlahRviwS~~~-~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE-P-LPATEILAHRVIWSFPF-MLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc-c-CCHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            46899999999999999999999863 5 99999999999999888 766554444322111  2344667777777777


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCC
Q 018663           81 SCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSS  160 (352)
Q Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~  160 (352)
                      -..+...|.+|.++..+-++++=++..|++..+++++++|||++..      |++.+.++.+||.......+        
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g--------  147 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG--------  147 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC--------
Confidence            7999999999999999999999999999999999999999999999      99999999999987774322        


Q ss_pred             CCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCc
Q 018663          161 SSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPD  240 (352)
Q Consensus       161 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  240 (352)
                                  ...    ...+.=+++|++|-.+-|+..  .++ .+....-+..-.+..+...+..+.........+.
T Consensus       148 ------------~lp----wval~la~sf~~Ygl~RK~~~--v~a-~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~  208 (293)
T COG2962         148 ------------SLP----WVALALALSFGLYGLLRKKLK--VDA-LTGLTLETLLLLPVALIYLLFLADSGQFLQQNAN  208 (293)
T ss_pred             ------------CCc----HHHHHHHHHHHHHHHHHHhcC--Cch-HHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCc
Confidence                        122    234445889999998865543  343 5555555555555555544433332210111223


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccch
Q 018663          241 TELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  320 (352)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~  320 (352)
                      ..+..+...|+ .+++...+|..+-|+++-+..+.+.|++|..-.+++++++||+++..+++..++|-+|+.++.++.-+
T Consensus       209 ~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         209 SLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             hHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555666665 88999999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             hh
Q 018663          321 EE  322 (352)
Q Consensus       321 ~~  322 (352)
                      +.
T Consensus       288 ~~  289 (293)
T COG2962         288 TA  289 (293)
T ss_pred             HH
Confidence            43

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.84  E-value=1.5e-19  Score=164.55  Aligned_cols=232  Identities=16%  Similarity=0.182  Sum_probs=189.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           70 IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        70 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      ..+..+..+.+.+..++.+..|+.+++++..+++.+++-+||..++.++..||+++.      |++++++++.|++++..
T Consensus       158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~  231 (416)
T KOG2765|consen  158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTM  231 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEe
Confidence            445566667777999999999999999999999999999999999999999999999      99999999999999986


Q ss_pred             ecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHH---HHHHHHHHHHHHHHHHH
Q 018663          150 YKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMA---TFICCVFVTIQSTVVAL  226 (352)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~  226 (352)
                      .+..+.+.            ........|++++++||+.||.|.++.||...+.+..+.+   -.+..++..++++|..+
T Consensus       232 ~~s~~~~~------------~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~  299 (416)
T KOG2765|consen  232 GDSKQNSD------------LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI  299 (416)
T ss_pred             cccccccc------------CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence            54332211            3456678999999999999999999999987665322322   24445566666666554


Q ss_pred             hhcC-CCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHH
Q 018663          227 IAER-NPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGAT  305 (352)
Q Consensus       227 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~  305 (352)
                      +.+. ....++.|.......+++.+.++++++-++|.++.-..+|..++..+.++.+.+++.+.++-|.++|+.+++|.+
T Consensus       300 iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi  379 (416)
T KOG2765|consen  300 ILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSI  379 (416)
T ss_pred             HHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHH
Confidence            3222 123344444455666778889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhcccc
Q 018663          306 IVAFGFYSVIWGQS  319 (352)
Q Consensus       306 lii~g~~l~~~~~~  319 (352)
                      .|++|.+.+++...
T Consensus       380 ~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  380 PIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHhheecccc
Confidence            99999999987654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.80  E-value=1.6e-17  Score=154.73  Aligned_cols=266  Identities=14%  Similarity=0.145  Sum_probs=205.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHH
Q 018663           34 DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFI  113 (352)
Q Consensus        34 ~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~i  113 (352)
                      |..+++..++...+. -.+.....+++    +.++..+..++..+++..++..+.+.|++|++...-.+..++.|+++++
T Consensus        32 ~~~lt~~q~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   32 PLFLTFVQFAFNALF-SFILLSLFKFP----KSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             cHHHHHHHHHHHHHH-HHHHHHhcccc----CCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            788888888887776 55544333311    1222335677888888899999999999999999999999999999999


Q ss_pred             HHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHH
Q 018663          114 LALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLY  193 (352)
Q Consensus       114 la~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~  193 (352)
                      ++.+++|+|.+++      ++.++++..+|+.+....+..+....      +    ........|+++.+++.++.|+..
T Consensus       107 ~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~~------~----~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen  107 LGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSSS------N----SSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHHhcCccccHH------HHHHHHHHHhhHheeeeccccccccc------c----cccccchhHHHHHHHHHHHHHHHH
Confidence            9999999999999      99999999999988875543221110      0    112223449999999999999999


Q ss_pred             HHHHhhhhcCC-hhhHHHHHHHHHHHHHHHHHHHh--hcCCCCccc--cCCcchhhHHHHHHHHHHHHHHHHHHHHhccC
Q 018663          194 IVQTSIIREYP-EELMATFICCVFVTIQSTVVALI--AERNPNSWR--LKPDTELIAIGCSAFFAVALRSLAHTWACHKK  268 (352)
Q Consensus       194 vl~k~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  268 (352)
                      +.++|..++++ .+.+.+++...++.++..+....  .++..+.+.  ...+..+..++... ++..++..+.++..++.
T Consensus       171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~  249 (303)
T PF08449_consen  171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKF  249 (303)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            99999987653 24889999999999998888776  222111111  11112233333333 46677788888899999


Q ss_pred             CceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchh
Q 018663          269 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  321 (352)
Q Consensus       269 ~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~  321 (352)
                      +|...++...+.-+++++++++++|+++++.+|+|.++++.|..+....++|+
T Consensus       250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999877765

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=4.3e-17  Score=149.70  Aligned_cols=275  Identities=13%  Similarity=0.140  Sum_probs=210.4

Q ss_pred             HHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 018663           19 GSSTLNKAAMN--KGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSS   96 (352)
Q Consensus        19 ~~~~~~k~~~~--~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~   96 (352)
                      ......|+.++  +.--|..++..+...+.+. ++.......++.. +..++..+...+..|++.+.+..+.+.++.|.+
T Consensus        31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~-~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   31 GVIILNKYILSKYGFPFPITLTMLHLFCGALA-LLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVP  108 (316)
T ss_pred             eeEEeeHhhhccCCCCCccHHHHHHHHHHHHH-HHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccc
Confidence            33456788887  4456888888877777776 5554433333222 222335678889999999999999999999999


Q ss_pred             cchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcch
Q 018663           97 PTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWI  176 (352)
Q Consensus        97 ~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (352)
                      ++....+..++|+++.++++++.+|+.+..      .+..+...+.|+.+-.. .                   +.+...
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~-~-------------------e~~fn~  162 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV-T-------------------ELSFNL  162 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee-c-------------------cccccH
Confidence            999999999999999999999999999999      88888888888755442 1                   134566


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhh----cCChhhHHHHHHHHHHHHHHH-HHHHhhcCCCCc-ccc-CCcchhhHHHHH
Q 018663          177 IGGLVLAAGSFFLSLLYIVQTSIIR----EYPEELMATFICCVFVTIQST-VVALIAERNPNS-WRL-KPDTELIAIGCS  249 (352)
Q Consensus       177 ~G~~~~l~aa~~~a~~~vl~k~~~~----~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~  249 (352)
                      .|.+.++.+.+..++.++++|++.+    +.++ ++...++...+.+.++ |.....+++... +.. +.........+.
T Consensus       163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~-~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (316)
T KOG1441|consen  163 FGFISAMISNLAFALRNILSKKLLTSKGESLNS-MNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccccCc-hHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence            9999999999999999999999884    2455 9999999999999998 776655553220 011 111112222233


Q ss_pred             HHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhh
Q 018663          250 AFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  323 (352)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~  323 (352)
                      . .+...-....+..+.+.+|.+-++.+...-++.++.++++++|+.++.+.+|.++.++|++++++.|+|+++
T Consensus       242 s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  242 S-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             H-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            3 233344455568899999999999999999999999999999999999999999999999999987776554

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.71  E-value=1.8e-17  Score=143.53  Aligned_cols=270  Identities=13%  Similarity=0.109  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018663           15 CLEVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIG   93 (352)
Q Consensus        15 ~~wg~~~~~~k~~~~~~~~-~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~   93 (352)
                      ++-......+......|++ |..-.+.....-+++ -.++..++++  .   + .-.|.++++.+++..-++.+...|.|
T Consensus        28 L~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalV-Y~~~~~fR~~--~---~-~~~~~hYilla~~DVEaNy~vV~AyQ  100 (336)
T KOG2766|consen   28 LLITSTAFTSSELARKGINAPTSQTFLNYVLLALV-YGPIMLFRRK--Y---I-KAKWRHYILLAFVDVEANYFVVKAYQ  100 (336)
T ss_pred             HHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHH-HhhHHHhhhH--H---H-HHHHHHhhheeEEeecccEEEeeehh
Confidence            3333444444455445444 555556666666666 6776655432  1   1 12346688888888888889999999


Q ss_pred             ccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCC
Q 018663           94 YSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQK  173 (352)
Q Consensus        94 ~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (352)
                      |++-+...++..-....+.+++|+++|.|.++.      ++.|+.+|+.|++++.+.+-.. ..           ++++.
T Consensus       101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a-gd-----------~aggs  162 (336)
T KOG2766|consen  101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA-GD-----------RAGGS  162 (336)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc-cc-----------ccCCC
Confidence            999999999999888889999999999999999      9999999999999988543221 11           14567


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHH
Q 018663          174 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFA  253 (352)
Q Consensus       174 ~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (352)
                      +..+|+.+++++|-+||..++....+.++.|. .+.+....++|+++..+- ++++..... ....... ....+....+
T Consensus       163 np~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm~~lgLfGaIIsaIQ-~i~~~~~~~-tl~w~~~-i~~yl~f~L~  238 (336)
T KOG2766|consen  163 NPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELMGFLGLFGAIISAIQ-FIFERHHVS-TLHWDSA-IFLYLRFALT  238 (336)
T ss_pred             CCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHHHHHHHHHHHHHHHH-Hhhhcccee-eEeehHH-HHHHHHHHHH
Confidence            78899999999999999999999999999886 999999999999998887 445432111 1111011 1122224456


Q ss_pred             HHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhh
Q 018663          254 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  315 (352)
Q Consensus       254 ~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~  315 (352)
                      .++-|.+....+|.-+++..++.....-.++.+.  -.+|-+.+|..++..+.+..|.+++.
T Consensus       239 MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  239 MFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            6667777778899999999999999999999988  56788899999999999999988883

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.63  E-value=4.6e-14  Score=125.66  Aligned_cols=253  Identities=17%  Similarity=0.190  Sum_probs=184.7

Q ss_pred             hHHHHHHHHHHHHHHHHHhHhhhhhccC-C-CCCCCHHH-HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHH
Q 018663           34 DFVLIVYSNAFAAIFILLPSTFIYYRNR-T-RPPLTVSI-ICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAF  110 (352)
Q Consensus        34 ~~~~~~~R~~~a~l~~l~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~  110 (352)
                      |..++.+.++.=.++ .......+++.. + +.+.+|++ ++++...|+..+..-++.+++++|++.+..+...+++++|
T Consensus        45 PLf~ts~h~~v~flf-a~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLF-AALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHH-HHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHH
Confidence            666666666554444 333333333221 1 12456665 5677788888899999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHH
Q 018663          111 TFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLS  190 (352)
Q Consensus       111 t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a  190 (352)
                      +.+++.++.-||++|.      -..-+.+..+|+.+++ +++                   ++....|..+.+.|+++-+
T Consensus       124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft-~Ks-------------------Tqf~i~Gf~lv~~aS~~sG  177 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YKS-------------------TQFNIEGFFLVLAASLLSG  177 (349)
T ss_pred             HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-ecc-------------------cceeehhHHHHHHHHHhhh
Confidence            9999999999999997      6556666667776666 333                   3345578888888888888


Q ss_pred             HHHHHHHhhhhcCC----hhhHHHHHHHHHHHHHHHHHHHhhcCCCC-----ccccCCc-chhhHHHHHHHHHHHHHHHH
Q 018663          191 LLYIVQTSIIREYP----EELMATFICCVFVTIQSTVVALIAERNPN-----SWRLKPD-TELIAIGCSAFFAVALRSLA  260 (352)
Q Consensus       191 ~~~vl~k~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~  260 (352)
                      +...+.+++.++.|    .|....+.......+.++|..+.+|+...     .|..... ..+..+.+.++ +..+++.+
T Consensus       178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l  256 (349)
T KOG1443|consen  178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL  256 (349)
T ss_pred             hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence            87777777776654    36777777777777788888888877432     2222222 12333333333 33344333


Q ss_pred             H---HHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhh
Q 018663          261 H---TWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  314 (352)
Q Consensus       261 ~---~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~  314 (352)
                      -   +..+.+.+..+.|+.....-+-+.+++.++.+|+++...|+|.++...|+...
T Consensus       257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            3   35578899999999999999999999999999999999999999999999887

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=6.4e-14  Score=120.22  Aligned_cols=228  Identities=14%  Similarity=0.073  Sum_probs=184.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           72 CKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        72 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      +.+..+++-..+.+...+.|++|.+-.+..+=.++-|+-+.+++..+.+++.+|+      +...+.+.++||++.....
T Consensus        86 ~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValFmYK~  159 (337)
T KOG1580|consen   86 KMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALFMYKE  159 (337)
T ss_pred             hHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHhhccc
Confidence            4667777777889999999999999999999999999999999999999999999      9999999999998877332


Q ss_pred             CCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCC-hhhHHHHHHHHHHHHHHHHHHHhhcC
Q 018663          152 GPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIAER  230 (352)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~  230 (352)
                      ++..+             ........|.++.++|-..-++....+.+..+.+. ....++++..+.+++.+....+++++
T Consensus       160 ~Kv~g-------------~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE  226 (337)
T KOG1580|consen  160 NKVGG-------------AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE  226 (337)
T ss_pred             cccCC-------------CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh
Confidence            32211             23567889999999999999999999988876552 22678888999999888776665543


Q ss_pred             CCC--ccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHH
Q 018663          231 NPN--SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA  308 (352)
Q Consensus       231 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii  308 (352)
                      .+.  .+..-.+..|.-+..+++ ++.+++.+.+.-+...||.+.|+.....-.++++.++++++.+++.+||+|.++++
T Consensus       227 lweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF  305 (337)
T KOG1580|consen  227 LWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVF  305 (337)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHH
Confidence            221  111111233555666665 88999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcccc
Q 018663          309 FGFYSVIWGQS  319 (352)
Q Consensus       309 ~g~~l~~~~~~  319 (352)
                      .|...-....|
T Consensus       306 ~aL~~D~~~GK  316 (337)
T KOG1580|consen  306 SALTADVVDGK  316 (337)
T ss_pred             HHhhhHhhcCC
Confidence            99877655444

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.60  E-value=7.1e-15  Score=114.52  Aligned_cols=136  Identities=12%  Similarity=0.088  Sum_probs=120.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (352)
                      ...+..++++++||...++.|..+++ +||..-++.|.....++ +..+....++.......++|.|..+.+.|+.+..+
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~-l~~v~~~~g~~~~~~~~~~k~~lflilSGla~gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIF-LLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHH-HHHHHHhcCceecccccCcceehhhhHHHHHHHHH
Confidence            45678899999999999999999966 99999999999998888 77776666654332235778889999999888999


Q ss_pred             HHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        85 ~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..+||.|++...++....+..++|+++.+++++++|||+|..      +|+|+.+.++|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      9999999999998765

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.57  E-value=8.6e-14  Score=108.50  Aligned_cols=136  Identities=19%  Similarity=0.155  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHH
Q 018663          178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  257 (352)
Q Consensus       178 G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (352)
                      ..++++++++.+++..+..|--.++.++ ..-+..+.++..+.+..+.+..+ +.......+...|..+...| ..++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp-~~At~IRtiVi~~~l~~v~~~~g-~~~~~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDP-DFATTIRTIVILIFLLIVLLVTG-NWQAGGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCc-cHHHHHHHHHHHHHHHHHHHhcC-ceecccccCcceehhhhHHH-HHHHHH
Confidence            4688999999999999999998888776 88888888888888777766544 22222223556688888888 599999


Q ss_pred             HHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          258 SLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       258 ~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      +.+|+++++..+++++..+.-+.|++++++++++++|++|..+++|.++|.+|.+++.+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999988754

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.56  E-value=3.2e-12  Score=117.03  Aligned_cols=300  Identities=12%  Similarity=0.086  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHhHhhhhhcc---CCCCC------CCHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKG---TSDFVLIVYSNAFAAIFILLPSTFIYYRN---RTRPP------LTVSIIC   72 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~---~~~~~~~~~R~~~a~l~~l~~i~~~~~~~---~~~~~------~~~~~~~   72 (352)
                      .-++.++...+-++......|+....+   +.|-..++.--.+-.++ ...+.+...|+   +..+.      .++++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~-c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVF-CLFLLLFEERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence            346778888899999999999997665   55666666665555554 44443333211   11011      1445667


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecC
Q 018663           73 KIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKG  152 (352)
Q Consensus        73 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~  152 (352)
                      +..+-+++++..+.+.|.++.+.+++..++..++--+-|++++.+++++|.+++      ||...++.+.|+.++.....
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            778888888888889999999999999999999999999999999999999999      99999999999988873222


Q ss_pred             CccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChh-hHHHHHHHHHHHHHHHHHHHhhcCC
Q 018663          153 PALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEE-LMATFICCVFVTIQSTVVALIAERN  231 (352)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~  231 (352)
                      +..+..+         .........|....+.+++..++..++.+|..|.-..+ ..-+.-..++|.+......+..+.+
T Consensus       168 ~~~~a~~---------~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~  238 (345)
T KOG2234|consen  168 SPTGAKS---------ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGE  238 (345)
T ss_pred             CCCCccC---------CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            2111110         03355678999999999999999999999998763221 2233333344555444444433333


Q ss_pred             CCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhh
Q 018663          232 PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGF  311 (352)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~  311 (352)
                      ...| ..-..+|....+..++.++.+=.+-...+|+.+-..=+....+..+++.+.++.++|-++|....+|..+++.++
T Consensus       239 ~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si  317 (345)
T KOG2234|consen  239 AINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSI  317 (345)
T ss_pred             cccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHH
Confidence            2222 112233444444455555555555555566666555556666889999999999999999999999999999999


Q ss_pred             hhhhcccchh
Q 018663          312 YSVIWGQSEE  321 (352)
Q Consensus       312 ~l~~~~~~~~  321 (352)
                      .++...+++.
T Consensus       318 ~lY~~~P~~~  327 (345)
T KOG2234|consen  318 FLYSLYPARD  327 (345)
T ss_pred             HHhhcCCccc
Confidence            9999665554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.51  E-value=7e-13  Score=119.11  Aligned_cols=230  Identities=15%  Similarity=0.178  Sum_probs=168.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhh
Q 018663           67 TVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        67 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      ++|+..++.+-+++.+..+.+.|.++++.+++.-.++.++-.++|++++++++|+|++.+      +|.++.+.++|+++
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence            457778888999999999999999999999999999999999999999999999999999      99999999999988


Q ss_pred             hheecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChh-hHHHHHHHHHHHHHHHHHH
Q 018663          147 VTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEE-LMATFICCVFVTIQSTVVA  225 (352)
Q Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~-~~~~~~~~~~~~v~~~~~~  225 (352)
                      +........+.   ..+.+.+.+........|.+..++++++.++..+..+|..|+.+.+ ..-+....+.|.++.++..
T Consensus        87 v~~~~~~~~~~---~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~  163 (244)
T PF04142_consen   87 VQLSSSQSSDN---SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLAL  163 (244)
T ss_pred             eecCCcccccc---ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Confidence            76432221100   0000100012245568999999999999999999999999876432 3444444555666555554


Q ss_pred             HhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHH
Q 018663          226 LIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGAT  305 (352)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~  305 (352)
                      ...+..... .......+-...+..++.+.++=.+-...+|+.+...=+.......+++.++++.++|.+++....+|..
T Consensus       164 ~~~~~~~~~-~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  164 LLSDGSAIS-ESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             hcccccccc-cCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            433221100 0111122333344455566666666677788888888888899999999999999999999999999976


Q ss_pred             H
Q 018663          306 I  306 (352)
Q Consensus       306 l  306 (352)
                      +
T Consensus       243 ~  243 (244)
T PF04142_consen  243 L  243 (244)
T ss_pred             c
Confidence            5

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.48  E-value=1.4e-11  Score=111.23  Aligned_cols=275  Identities=11%  Similarity=0.084  Sum_probs=208.2

Q ss_pred             HHHHHHHHHHHhcCCChHHHHH--HHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018663           18 VGSSTLNKAAMNKGTSDFVLIV--YSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYS   95 (352)
Q Consensus        18 g~~~~~~k~~~~~~~~~~~~~~--~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~   95 (352)
                      ....+..|..+...--|..+..  .+.+...+. +...-.. + -.+.++++++..++.+...++..+....-..+++|.
T Consensus        25 ~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~-v~~lk~~-~-lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~l  101 (314)
T KOG1444|consen   25 ILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLV-VLVLKRL-G-LVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYL  101 (314)
T ss_pred             HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HHHHHHh-c-eeecCCcChHHHHHHccHHHHHHHHHHHcccccccc
Confidence            3445567888765422333333  666665554 4433211 1 112267888999999999999999999999999999


Q ss_pred             CcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcc
Q 018663           96 SPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNW  175 (352)
Q Consensus        96 ~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (352)
                      ++...+++.+.+|+++++....++|.|++.+      .+..+....+|...-...                    +....
T Consensus       102 nVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~--------------------d~sf~  155 (314)
T KOG1444|consen  102 NVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT--------------------DLSFN  155 (314)
T ss_pred             CchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc--------------------cceec
Confidence            9999999999999999999999999999998      888888887877554421                    12233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhcC-ChhhHHHHHHHHHHHHHHHHHHHhhcCCC------CccccCCcchhhHHHH
Q 018663          176 IIGGLVLAAGSFFLSLLYIVQTSIIREY-PEELMATFICCVFVTIQSTVVALIAERNP------NSWRLKPDTELIAIGC  248 (352)
Q Consensus       176 ~~G~~~~l~aa~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  248 (352)
                      ..|+.+++...+.-+.+.+..||..+.. -....+.+|..+.+.+.+.+..+++++..      ++|..  ...+..+..
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~--~~~~~~~~l  233 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD--SSVLVVMLL  233 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc--hhHHHHHHH
Confidence            3589999999999999999999876532 11367889999999999888887776411      11221  234667778


Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhhc
Q 018663          249 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKM  324 (352)
Q Consensus       249 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~~  324 (352)
                      .++.+.++.|..+ ++.+..++++-++.+...-..+.+-..+++|++.++...+|..+-++|-++++..+.|+++.
T Consensus       234 Scv~gf~isy~s~-~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  234 SCVMGFGISYTSF-LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHHHHHHHH-HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            8887777776655 78889999999999988888888888889999999999999999999999998876555433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=2.2e-13  Score=109.34  Aligned_cols=125  Identities=20%  Similarity=0.308  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhc
Q 018663          187 FFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  266 (352)
Q Consensus       187 ~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  266 (352)
                      ++||.+.+..|+..++.|+ ....++++..+++ ..+.....+...  ....+...+....+.+++++++++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISP-LSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCCH-HHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4689999999999999886 9999999999998 666665544332  23344456777888898889999999999999


Q ss_pred             cCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhh
Q 018663          267 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  315 (352)
Q Consensus       267 ~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~  315 (352)
                      +.+++.++.+.+++|+++.++++++++|++++.+++|.++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.44  E-value=2.5e-13  Score=108.95  Aligned_cols=124  Identities=22%  Similarity=0.262  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhc
Q 018663           15 CLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQTCLYVGIG   93 (352)
Q Consensus        15 ~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~   93 (352)
                      ++||...++.|...++ .||....++|+..+.+. +.... ..+++.. ++.+.+++......|.++ ..++.+++.|++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGIL-LILLL-ILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHHH-HHHHH-hhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4799999999999988 99999999999999853 33322 2333222 445667778888889887 999999999999


Q ss_pred             ccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           94 YSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        94 ~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      +++++.++.+.++.|+++.+++++++|||++++      +++|+++.+.|++++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999      9999999999997764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.30  E-value=1.4e-10  Score=103.75  Aligned_cols=265  Identities=14%  Similarity=0.122  Sum_probs=197.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHH
Q 018663           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTF  112 (352)
Q Consensus        33 ~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~  112 (352)
                      ++..+++...+.+.++ -.......+++    ...+..+.++...++.+..+..+-|.|++|++--.-.+-.++--+-++
T Consensus        50 ~~~fL~~~q~l~~~~~-s~~~l~~~k~~----~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLV-SYAMLKWWKKE----LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             ccHHHHHHHHHHHHHH-HHHHHhccccc----CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            3455555555555554 43222222222    112234567777788888899999999999999999999998888889


Q ss_pred             HHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHH
Q 018663          113 ILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLL  192 (352)
Q Consensus       113 ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~  192 (352)
                      +.+.++.|.|.++.      +-....+.-.|+.+..+.+..+...  +         ++.+....|..++...-+.-++.
T Consensus       125 lmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~~--~---------~g~~ns~~G~~Ll~~~L~fDgfT  187 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSSS--K---------SGRENSPIGILLLFGYLLFDGFT  187 (327)
T ss_pred             HHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCcc--c---------cCCCCchHhHHHHHHHHHHHhhH
Confidence            99999999999999      9999999999998888764433111  1         34567789999999999999999


Q ss_pred             HHHHHhhhhcC-ChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccc--cCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018663          193 YIVQTSIIREY-PEELMATFICCVFVTIQSTVVALIAERNPNSWR--LKPDTELIAIGCSAFFAVALRSLAHTWACHKKG  269 (352)
Q Consensus       193 ~vl~k~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  269 (352)
                      +..+.++.++. -++..++++..+++++........-+...+...  ...+.-+.-++.... +..+++.+-++-+++.|
T Consensus       188 n~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  188 NATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence            99999988764 223889999999998887766332222122111  111122333444443 77899999999999999


Q ss_pred             ceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccch
Q 018663          270 PVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  320 (352)
Q Consensus       270 ~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~  320 (352)
                      +.+.++++.+.-++++.++.++++.++++.|++|..+++.|+.+=...++|
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999886665555

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.22  E-value=1.9e-10  Score=104.49  Aligned_cols=130  Identities=20%  Similarity=0.196  Sum_probs=110.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTS--DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~--~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (352)
                      .++....++++++|+...+..|...++ .+  +.....+++..+.++ +.+.....++.   +..+.+++...+..|+++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALL-LLPFAWFLGPN---PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHH-HHHHHHhcCCC---CCcchHHHHHHHHHHHHH
Confidence            478899999999999999999998865 66  445555788888888 87776554432   223556777788888888


Q ss_pred             -HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhh
Q 018663           82 -CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGA  144 (352)
Q Consensus        82 -~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv  144 (352)
                       ..++.+++.++++.+++.++.+.++.|+++.+++++++|||++..      ++.|..+.+.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence             899999999999999999999999999999999999999999999      999999999886

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.21  E-value=1.6e-09  Score=97.45  Aligned_cols=222  Identities=13%  Similarity=0.091  Sum_probs=154.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhh
Q 018663           68 VSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        68 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      .+.+...++.|++...+|...+.++++.+++.+..+.. .+-+.+.+.+.++++|.-+..++  .....++++.++|+.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~l  119 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVIL  119 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHH
Confidence            37788889999999999999999999999999999986 67788999999999998886610  0123366778888877


Q ss_pred             hheecCCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHH
Q 018663          147 VTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVAL  226 (352)
Q Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  226 (352)
                      ....++++...            ++......|....+++.++|..|.+..|-..  .++ ....+-+.+-..+-..+...
T Consensus       120 ts~~~~~~~~~------------~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~--~~~-~~~~lPqaiGm~i~a~i~~~  184 (269)
T PF06800_consen  120 TSYQDKKSDKS------------SSKSNMKKGILALLISTIGYWIYSVIPKAFH--VSG-WSAFLPQAIGMLIGAFIFNL  184 (269)
T ss_pred             hcccccccccc------------ccccchhhHHHHHHHHHHHHHHHHHHHHhcC--CCh-hHhHHHHHHHHHHHHHHHhh
Confidence            66433221110            1234567899999999999999999977633  333 44443332222222222222


Q ss_pred             hhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchh----hhh
Q 018663          227 IAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG----SVV  302 (352)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~----~~i  302 (352)
                      +.+..   ...  ...|..+  ++-+.-.++..++..+.++.|.+..=.+..+.++++.+.+.+++||+=+..    .++
T Consensus       185 ~~~~~---~~~--k~~~~ni--l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~  257 (269)
T PF06800_consen  185 FSKKP---FFE--KKSWKNI--LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLI  257 (269)
T ss_pred             ccccc---ccc--cchHHhh--HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHH
Confidence            22111   111  1112222  222355678888999999999999999999999999999999999987755    457


Q ss_pred             hHHHHHhhhhh
Q 018663          303 GATIVAFGFYS  313 (352)
Q Consensus       303 G~~lii~g~~l  313 (352)
                      |.+++++|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            88888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.18  E-value=4e-10  Score=99.48  Aligned_cols=278  Identities=12%  Similarity=0.112  Sum_probs=188.9

Q ss_pred             HHHHHHHHHHHh---cCC----ChHHHHHHHHHHHHHHHHHhHhhhhhccCCC--------------CCCCHHHHHHHHH
Q 018663           18 VGSSTLNKAAMN---KGT----SDFVLIVYSNAFAAIFILLPSTFIYYRNRTR--------------PPLTVSIICKIFG   76 (352)
Q Consensus        18 g~~~~~~k~~~~---~~~----~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~--------------~~~~~~~~~~~~~   76 (352)
                      +.+-++.|++-+   +|.    .|+......++.-+++ +..+..++.|....              ++++.   ..++.
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflC-l~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl~   91 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLC-LAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP---VLFLP   91 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCcccccccccccccCCCCc---ceecC
Confidence            345566777632   233    3666666677777777 77766665543220              12222   23444


Q ss_pred             HHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccc
Q 018663           77 LGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALV  156 (352)
Q Consensus        77 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~  156 (352)
                      -+++...+..++|.|+++++++.-..+-...-+|+.+++--++|.+++.+      +|.|+....+|++.+...+ .+.+
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d-~~~~  164 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD-VHLV  164 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee-cccc
Confidence            66777888899999999999999999999999999999999999999999      9999999999998876432 1111


Q ss_pred             cCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcC-ChhhHHHHHHHHHHHHHHHHHHHhhcCC--CC
Q 018663          157 SMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREY-PEELMATFICCVFVTIQSTVVALIAERN--PN  233 (352)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~  233 (352)
                      +.+.         .+......|+++.+.+-+..|+-.+..+|..++. .+|.....|..++|.+++..++..+..-  .+
T Consensus       165 ~~p~---------~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~  235 (372)
T KOG3912|consen  165 TDPY---------TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD  235 (372)
T ss_pred             cCCc---------cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence            1000         1235667899999999999999999988876653 3359999999999977766665433221  11


Q ss_pred             ccccCCcc---hhh---------HHHHHHHHHHHHHHHHHH----HHhccCCceEEeeccchHHHHHHHHHHHHhCCccc
Q 018663          234 SWRLKPDT---ELI---------AIGCSAFFAVALRSLAHT----WACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY  297 (352)
Q Consensus       234 ~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s  297 (352)
                      .++..+..   +|.         ..++..+.+..++--+|+    .-.|..++++=.+.-.+...+-=+++.....|.+.
T Consensus       236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence            22221111   111         112223333333333333    22455666666666667777666777777889999


Q ss_pred             hhhhhhHHHHHhhhhhhh
Q 018663          298 LGSVVGATIVAFGFYSVI  315 (352)
Q Consensus       298 ~~~~iG~~lii~g~~l~~  315 (352)
                      ..|+.|.++.+.|+.+++
T Consensus       316 llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999986

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.18  E-value=1.4e-10  Score=101.99  Aligned_cols=281  Identities=13%  Similarity=0.069  Sum_probs=191.6

Q ss_pred             HHHHHHHhcC---C-ChHHHHHHHHHHHHHHHHHhHhhhhhcc-CC--CC--CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018663           22 TLNKAAMNKG---T-SDFVLIVYSNAFAAIFILLPSTFIYYRN-RT--RP--PLTVSIICKIFGLGLISCCVQTCLYVGI   92 (352)
Q Consensus        22 ~~~k~~~~~~---~-~~~~~~~~R~~~a~l~~l~~i~~~~~~~-~~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al   92 (352)
                      ...|++++..   . .|..+.++.-+....+ .+.......+- .+  .+  +++.+..+......+...+.-.+-++.+
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~-c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSI-CLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHH-HHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceeh
Confidence            3567666431   2 3555666665555443 33332222211 01  02  2344444555555555555555667778


Q ss_pred             cccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccccCCCCCCCCCccCCCC
Q 018663           93 GYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQ  172 (352)
Q Consensus        93 ~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~  172 (352)
                      +|++++..-+=-++..+|+.+++++++|||-+..      ...+..+.+.|.     +-|.+.+.            ..+
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF-----~lGvdqE~------------~~~  180 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGF-----GLGVDQEG------------STG  180 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehh-----eecccccc------------ccC
Confidence            9999999988889999999999999999999987      555444444443     32322111            224


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhhhhcCC-hhhHHHHHHHHHHHHHHHHHHHhhcCCC--CccccC-CcchhhHHHH
Q 018663          173 KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIAERNP--NSWRLK-PDTELIAIGC  248 (352)
Q Consensus       173 ~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~  248 (352)
                      .....|.++++.|.++-|+..+..||...... .-...++|..+.+.++++|...+-++-.  .+++.. ...-|..+..
T Consensus       181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTL  260 (347)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHH
Confidence            55678999999999999999999997765443 3477899999999999999887543311  122222 2334666666


Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhhcccc
Q 018663          249 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDD  327 (352)
Q Consensus       249 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~~~~~  327 (352)
                      .|+++-.++|.-. +=+|..+|.+-.+.....-..-.++++.+++|.-+...|-|-++++.|...+.+.|+++.+++.+
T Consensus       261 sglfgF~mgyvTg-~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~  338 (347)
T KOG1442|consen  261 SGLFGFAMGYVTG-WQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA  338 (347)
T ss_pred             HHHHHHHhhheee-EEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence            6765555544322 44788999999999999999999999999999999999999999999999999887766655433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.07  E-value=1.2e-09  Score=101.52  Aligned_cols=139  Identities=13%  Similarity=0.138  Sum_probs=110.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccc--cCCcchhhHHHHHHH
Q 018663          174 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR--LKPDTELIAIGCSAF  251 (352)
Q Consensus       174 ~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  251 (352)
                      +..+|.++++.++++|+...+..|.. .+.++ .+..++++.++.+++.+......+ .....  ..+...+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~-~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPA-DEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCH-HHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence            44589999999999999999999765 56664 999999999998877766543321 11100  0011222 2333566


Q ss_pred             HHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          252 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       252 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      +..+..+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|.++.++|+.+..+
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            67888999999999999999999999999999999999999999999999999999999988753

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.06  E-value=1.7e-10  Score=91.49  Aligned_cols=103  Identities=22%  Similarity=0.350  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHhHhhhhhccCC-CCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHH
Q 018663           39 VYSNAFAAIFILLPSTFIYYRNRT-RPPLTVSIICKIFGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILAL  116 (352)
Q Consensus        39 ~~R~~~a~l~~l~~i~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~  116 (352)
                      .+|+..+.++ +..+....++... .+..+++.+.+....|+++ ..++.++++|+++.+ +.++++.++.|+++.++++
T Consensus         2 a~r~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLF-LLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHH-HHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            4788898888 7776655433211 0122224455667778888 699999999999999 5888999999999999999


Q ss_pred             HHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663          117 ISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus       117 ~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      +++|||++.+      ++.++.++++|++++..
T Consensus        80 ~~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   80 LFFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HHhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            9999999999      99999999999998874

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.06  E-value=1.5e-09  Score=90.51  Aligned_cols=138  Identities=14%  Similarity=0.187  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhc------CChhhHHHHHHHHHHHHHHHHHHHhhcCCCC--ccc-cC------Ccch
Q 018663          178 GGLVLAAGSFFLSLLYIVQTSIIRE------YPEELMATFICCVFVTIQSTVVALIAERNPN--SWR-LK------PDTE  242 (352)
Q Consensus       178 G~~~~l~aa~~~a~~~vl~k~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~-~~------~~~~  242 (352)
                      |.++++.|.++.|+++++.|+..++      ..++.++..+....+.+++.+..++.|+...  ... ..      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999988665      3335999999999999999999887765421  111 00      1122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          243 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      +..++..++ .........+..+++.+|.+.++...+..+...+.+++++||++++.+++|.++.++|.+++++
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            333444443 4456666777899999999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.06  E-value=2.8e-09  Score=98.24  Aligned_cols=134  Identities=15%  Similarity=0.098  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHH
Q 018663          179 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  258 (352)
Q Consensus       179 ~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (352)
                      .++.+.++++||..++.+|+..++.+.   ..++......+++.|...... ....|+..+.. +......+.......+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPD---FLWWALLAHSVLLTPYGLWYL-AQVGWSRLPAT-FWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhH---HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcchh-hHHHHHHHHHHHHHHH
Confidence            467899999999999999988776332   346666666777766655321 11334433322 3344445556788889


Q ss_pred             HHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          259 LAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       259 ~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      .++++++++.+++.++.+.++.|+++.+++++++||+++..+++|.++++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.04  E-value=9.4e-10  Score=92.43  Aligned_cols=218  Identities=15%  Similarity=0.145  Sum_probs=157.4

Q ss_pred             HHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCcc
Q 018663           76 GLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPAL  155 (352)
Q Consensus        76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~  155 (352)
                      ...++....+..|..|++..++++++.+..+...|+.+++++.+|||+...      ++...++++.|++++...++.  
T Consensus        58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN~--  129 (290)
T KOG4314|consen   58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADNE--  129 (290)
T ss_pred             ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccch--
Confidence            344555778999999999999999999999999999999999999999999      999999999999888743322  


Q ss_pred             ccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHH---HHHHHHH--HHHHHhhcC
Q 018663          156 VSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICC---VFVTIQS--TVVALIAER  230 (352)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~---~~~~v~~--~~~~~~~~~  230 (352)
                                      ......|...++.|+...|+|.++-|+...+-+- -.....+.   ++...+.  .++.+.+. 
T Consensus       130 ----------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~~~~lIL~~T-  191 (290)
T KOG4314|consen  130 ----------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFISFPALILAFT-  191 (290)
T ss_pred             ----------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHhhhHHHHHHh-
Confidence                            3455689999999999999999999998765422 22222222   2222221  11111121 


Q ss_pred             CCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhh
Q 018663          231 NPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFG  310 (352)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g  310 (352)
                      ...+|+......|..+...+....++ ..+-..++....|...|+-+.....-....+.++-+-..+.....|..+|..|
T Consensus       192 ~VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~  270 (290)
T KOG4314|consen  192 GVEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG  270 (290)
T ss_pred             chHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            11233321222366665544433222 23334677788899999999999999999999988888899999999999999


Q ss_pred             hhhhhcccch
Q 018663          311 FYSVIWGQSE  320 (352)
Q Consensus       311 ~~l~~~~~~~  320 (352)
                      ..+......|
T Consensus       271 FiLiiiP~d~  280 (290)
T KOG4314|consen  271 FILIIIPEDK  280 (290)
T ss_pred             HHheecccch
Confidence            9888765433

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.04  E-value=1.9e-09  Score=92.31  Aligned_cols=231  Identities=10%  Similarity=0.084  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecC
Q 018663           73 KIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKG  152 (352)
Q Consensus        73 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~  152 (352)
                      ..+...++-...-.....+++|.++...++..+++.+..+..-..++|.|.+-.      .....++.+...+.-. +.+
T Consensus        70 ~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~-w~D  142 (309)
T COG5070          70 KWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVAT-WGD  142 (309)
T ss_pred             hhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhc-cch
Confidence            334455555556667788999999999999999999999999999999999988      7777777766654333 211


Q ss_pred             CccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhh--cCChhhHHHHHHHHHHHHHHHHHHHhhcC
Q 018663          153 PALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR--EYPEELMATFICCVFVTIQSTVVALIAER  230 (352)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  230 (352)
                      .+...            ........|++++..-++.-+.+....||..+  +..+ ...++|..+.+.++++...+++|+
T Consensus       143 ~q~~~------------~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~ed  209 (309)
T COG5070         143 QQASA------------FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFED  209 (309)
T ss_pred             hhHHH------------HHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhcc
Confidence            11000            11235667999999999999999888887654  3344 788999999999999999998875


Q ss_pred             C-CCcccc-CCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHH
Q 018663          231 N-PNSWRL-KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA  308 (352)
Q Consensus       231 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii  308 (352)
                      . +.+... .+.....++...|+ +++.-..+-.|+++..+.++-|+.+.+.-.-..+-|.+++||+.+...+....+-.
T Consensus       210 ws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf  288 (309)
T COG5070         210 WSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF  288 (309)
T ss_pred             CCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence            3 222221 22223446666676 44444556679999999999999999999999999999999999999999988888


Q ss_pred             hhhhhhhcccchhhhc
Q 018663          309 FGFYSVIWGQSEEEKM  324 (352)
Q Consensus       309 ~g~~l~~~~~~~~~~~  324 (352)
                      .+..++...+.+|++.
T Consensus       289 lsg~iYavaks~k~q~  304 (309)
T COG5070         289 LSGAIYAVAKSKKQQN  304 (309)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            8878887766555443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.04  E-value=7.7e-09  Score=91.37  Aligned_cols=237  Identities=14%  Similarity=0.092  Sum_probs=161.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhh
Q 018663           64 PPLTVSIICKIFGLGLISCCVQTCLYVGIGYS-SPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIA  142 (352)
Q Consensus        64 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~-~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~  142 (352)
                      ++.+.|++..   .....+..+.+-++++++- +...=.++-+-.++-+++++|+++|.|.+.+      |...+.+..+
T Consensus        60 ~kiplk~Y~i---~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTi  130 (330)
T KOG1583|consen   60 PKIPLKDYAI---TVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITI  130 (330)
T ss_pred             CCCchhhhhe---ehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhh
Confidence            4445544332   2333355666777788876 4445555666799999999999999999999      9999999999


Q ss_pred             hhhhhheecCCcccc-CCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcC--ChhhHHHHHHHHHHHH
Q 018663          143 GALTVTLYKGPALVS-MSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREY--PEELMATFICCVFVTI  219 (352)
Q Consensus       143 Gv~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~--~~~~~~~~~~~~~~~v  219 (352)
                      |+++..+.+.++... .++.++.+  ..++...+..|..+...+-+..|.-.+.++...+++  + +-+..+|.-+...+
T Consensus       131 GiiIcTl~s~~d~~~~~~~l~~~~--~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP  207 (330)
T KOG1583|consen  131 GIIICTLFSSKDGRSKLSGLDSGS--AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLP  207 (330)
T ss_pred             hheeEEeecCcchhhhhcccccCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccc
Confidence            999988876655443 11111111  114456688999999889888888888887777665  3 36888898888877


Q ss_pred             HHHHHHH--------hhcCCCCcccc---CCcchhhHHHHHHHHHHHHHHHHHHH----HhccCCceEEeeccchHHHHH
Q 018663          220 QSTVVAL--------IAERNPNSWRL---KPDTELIAIGCSAFFAVALRSLAHTW----ACHKKGPVYVSMYKPLGIVFA  284 (352)
Q Consensus       220 ~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~s~~~~l~pv~~  284 (352)
                      .++...-        ....+....+.   .-+..|..++     .+.+.+..=.+    .-.+..+.++++...+.-.++
T Consensus       208 ~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl-----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvS  282 (330)
T KOG1583|consen  208 LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL-----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVS  282 (330)
T ss_pred             hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH-----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHH
Confidence            6665431        01101000000   1122333333     23333333333    345677888999999999999


Q ss_pred             HHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          285 IIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       285 ~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      .+++.+.++.++++..|+|.++++.|..++.-.
T Consensus       283 Ll~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  283 LLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.01  E-value=6e-09  Score=96.68  Aligned_cols=135  Identities=14%  Similarity=0.071  Sum_probs=109.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   83 (352)
                      .+.++.++++++|+...+..|...++ .++....... +.+++. +.+.......  . ...+...+...+..|++. ..
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~~-~~~~~~-l~~~~~~~~~--~-~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAE-HGPATVAIGS-LIAALI-FVPIGALQAG--E-ALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHH-HHHHHH-HHHHHHHccC--c-ccCCHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999998755 7777765444 455555 6665544322  1 234445555567788888 89


Q ss_pred             HHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      .+.+++.++++.+++.++.+.++.|+++.++++++++|+++..      +++|..+.+.|++......
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999      9999999999998886543

>TIGR00688 rarD rarD protein

Probab=99.00  E-value=2.9e-09  Score=96.80  Aligned_cols=137  Identities=12%  Similarity=0.155  Sum_probs=107.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCC---CccccCCcch-hhHHHHHHHH
Q 018663          177 IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP---NSWRLKPDTE-LIAIGCSAFF  252 (352)
Q Consensus       177 ~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~  252 (352)
                      +|..++++++++|+...+..|.. .+.++ .+..+++++++++++.+......+..   ..++...... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~-~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPLPA-TDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccCCH-HHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            58899999999999999999984 45665 99999999999888776654332110   1111111122 333444554 


Q ss_pred             HHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          253 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       253 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      ..+..+.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            3678899999999999999999999999999999999999999999999999999999987643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.95  E-value=2.1e-07  Score=87.09  Aligned_cols=300  Identities=11%  Similarity=0.029  Sum_probs=179.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH-HHHHHHHHHHh--HhhhhhccC--CCCCCCHHHHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYS-NAFAAIFILLP--STFIYYRNR--TRPPLTVSIICKIFGL   77 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R-~~~a~l~~l~~--i~~~~~~~~--~~~~~~~~~~~~~~~~   77 (352)
                      -+-+++..++++++||..++-.|. .+. .+ ++.-+.- ..++.+  +.|  ...+.-+..  ...+.+.+.+...++.
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~wl--~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSWL--ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHHH--HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            456899999999999999999998 333 33 2221110 001111  111  011111110  0123456778888999


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccc---ceeeccccceeehHHhhhhhhhhhheecCC
Q 018663           78 GLISCCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKL---DLRVQSSLAKSIGTMVSIAGALTVTLYKGP  153 (352)
Q Consensus        78 g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~---~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~  153 (352)
                      |++...++..++.++++.+++.+..+.. ++-+...++..++++|-.   +..  ......+|+++.++|+++.... +.
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~A-g~  156 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRA-GQ  156 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHh-hh
Confidence            9999999999999999999999998866 888999999999988754   211  1111667889999999887741 11


Q ss_pred             ccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHH-------HHHHhhhh-cCChhh--HHHHHHHHHHHHHHHH
Q 018663          154 ALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLY-------IVQTSIIR-EYPEEL--MATFICCVFVTIQSTV  223 (352)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~-------vl~k~~~~-~~~~~~--~~~~~~~~~~~v~~~~  223 (352)
                      ..+.. + ++++    ..+....+|.++++.|.+.++.|+       ...+...+ ..+++.  ...+..++.|..+.-.
T Consensus       157 ~k~~~-~-~~~~----~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~  230 (345)
T PRK13499        157 LKERK-M-GIKK----AEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNL  230 (345)
T ss_pred             hcccc-c-cccc----ccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            11000 0 0000    123567899999999999999999       44433211 122211  1112222244433322


Q ss_pred             -HHHh---hcCCCCccccCCc-----chhhHHHHHHHHHHHHHHHHHHHHhccCCceEEee----ccchHHHHHHHHHHH
Q 018663          224 -VALI---AERNPNSWRLKPD-----TELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSM----YKPLGIVFAIIMGVT  290 (352)
Q Consensus       224 -~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~----~~~l~pv~~~~~~~l  290 (352)
                       ....   ..+..+.......     .....+..++-+.=.++..+|..+-++.|....-+    .+.+..+++.+++. 
T Consensus       231 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-  309 (345)
T PRK13499        231 GFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-  309 (345)
T ss_pred             HHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-
Confidence             1111   1111111111110     11222333444455677778888888887665444    44888899999999 


Q ss_pred             HhCCccc------hhhhhhHHHHHhhhhhhhcc
Q 018663          291 LLGDTLY------LGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       291 ~l~E~~s------~~~~iG~~lii~g~~l~~~~  317 (352)
                      ++||.=+      ...++|.+++++|..+....
T Consensus       310 ~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        310 VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            5999755      56689999999999887654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.94  E-value=7.8e-09  Score=83.45  Aligned_cols=122  Identities=12%  Similarity=0.091  Sum_probs=94.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHH
Q 018663          177 IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVAL  256 (352)
Q Consensus       177 ~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (352)
                      .|.++.+.+.++-+..+++-|+-.++.++ .+.... ..    . ... ....             ....+++|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~~----~-~~~-~~~~-------------p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-FI----A-ALL-AFGL-------------ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-HH----H-HHH-HHhc-------------cHHHHHHHHHHHHH
Confidence            47889999999999999999998887654 332221 10    0 000 0000             12356788999999


Q ss_pred             HHHHHHHHhccCCceEEeeccchHHHHHHHHHHH--HhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          257 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVT--LLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       257 ~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l--~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      ++.+|.+++++.+++.+..+..+.++...+.++.  ++||++++.+++|.++|++|+++..+.++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999998888888888888875  89999999999999999999999876444

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.91  E-value=1.5e-08  Score=93.85  Aligned_cols=135  Identities=13%  Similarity=0.005  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-C   82 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   82 (352)
                      .++.+..++++++|+......|....  .++.....+++..+.+. +.+.......... ...+.+.+......|+++ .
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~  224 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVV-LLIASLLSGERLT-ALPTLSGFLALGYLAVFGSI  224 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHH-HHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHH
Confidence            35889999999999999999998643  33455667888888777 7766544322211 113456777888888888 8


Q ss_pred             HHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           83 CVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      .++.+++.++++.++++++++..+.|+++.++++++++|+++..      +++|..+.+.|++++.
T Consensus       225 ~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        225 IAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999      9999999999998775

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.85  E-value=4.3e-08  Score=93.11  Aligned_cols=138  Identities=14%  Similarity=0.111  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHHhHhhhhhccC---CCCCCCHHHHHHHHHHHHHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSD-FVLIVYSNAFAAIFILLPSTFIYYRNR---TRPPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~~~~~-~~~~~~R~~~a~l~~l~~i~~~~~~~~---~~~~~~~~~~~~~~~~g~~~   81 (352)
                      +.++++.++++|+...++.|....+ .++ ....++...++.+. +.+......+..   +....+...+ ..+..|++.
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~t  266 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIV-TSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHH-HHHHHHHHccCCcccceeccchHHH-HHHHHHHHH
Confidence            6688999999999999999988766 544 45555666666555 444333322211   1012232222 233344444


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecC
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKG  152 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~  152 (352)
                      .+.+.++++++++.+++.+++..++.|+++.++++++++|++++.      +++|.++.+.|+.+....+.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhhh
Confidence            678889999999999999999999999999999999999999999      99999999999988875443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.83  E-value=3.2e-08  Score=91.88  Aligned_cols=132  Identities=16%  Similarity=0.097  Sum_probs=102.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (352)
                      .+.+++++++++|+...+..|...++ .++.....   ..+.+. +.+...... ... ...+.+.+...+..|+....+
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~-l~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~t~~~  228 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALA-LWIKYFLSP-QPA-MVFSLPAIIKLLLAAAAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHH-HHHHHHHhc-Ccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            37789999999999999999997644 77765432   233333 333222222 211 234556666666666544889


Q ss_pred             HHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        85 ~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      +.+++.++++.+++.++.+.++.|+++.++++++++|+++..      +++|.++.+.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999      99999999999877753

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.82  E-value=5.9e-08  Score=85.59  Aligned_cols=226  Identities=12%  Similarity=0.100  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           72 CKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        72 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      +.+...+.+-...+.+..-++.|.+--.-.+...+--+-+.+.+.++-+.|..+.      ..++..+...|.++..+.+
T Consensus       107 rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLAD  180 (367)
T KOG1582|consen  107 RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLAD  180 (367)
T ss_pred             hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcc
Confidence            3445555555677888888999998888778888877778889999999999999      9999999999999988765


Q ss_pred             CCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCCh-hhHHHHHHHHHHHHHHHHHHHhhcC
Q 018663          152 GPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPE-ELMATFICCVFVTIQSTVVALIAER  230 (352)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~  230 (352)
                      ...                .......|....-.|-++-|.---+++|..+.+++ ..++.++...+|.+.+...+..+++
T Consensus       181 s~~----------------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge  244 (367)
T KOG1582|consen  181 SQT----------------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE  244 (367)
T ss_pred             ccc----------------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc
Confidence            432                12334578777777777778777777877776644 2667788889999988888777766


Q ss_pred             CCCccccCCcchhhHHHHHH--HHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHH
Q 018663          231 NPNSWRLKPDTELIAIGCSA--FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA  308 (352)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii  308 (352)
                      -.+.|..-..+.+-...|.-  -..+.++...-...++..|+..+..+....-.++++++++++..+++....-|+.+++
T Consensus       245 ~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~  324 (367)
T KOG1582|consen  245 LFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVV  324 (367)
T ss_pred             chhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHH
Confidence            56666542222232222111  1234455555566788899999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcccc
Q 018663          309 FGFYSVIWGQS  319 (352)
Q Consensus       309 ~g~~l~~~~~~  319 (352)
                      .|+++-...++
T Consensus       325 lgI~Ln~ysk~  335 (367)
T KOG1582|consen  325 LGIYLNMYSKR  335 (367)
T ss_pred             HHHHhhcccCC
Confidence            99999877663

>TIGR00803 nst UDP-galactose transporter

Probab=98.73  E-value=3.4e-08  Score=87.85  Aligned_cols=209  Identities=10%  Similarity=0.041  Sum_probs=128.8

Q ss_pred             cchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCCccc--------cCCCCCCCCCcc
Q 018663           97 PTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALV--------SMSSSSNLHNEL  168 (352)
Q Consensus        97 ~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~--------~~~~~~~~~~~~  168 (352)
                      ........+..|+++++..+...++|.+..      ++.+.++...|++.-.+.+.+...        ...+.++ ..+.
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~-~~~~   76 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQ-SSAK   76 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCC-CCcc
Confidence            344556677888899999998889998877      888888888887643322110000        0000000 0000


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHH-HHHHHHHHHHHHHHHHHhhcCCC-CccccCCcchhhHH
Q 018663          169 RSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMA-TFICCVFVTIQSTVVALIAERNP-NSWRLKPDTELIAI  246 (352)
Q Consensus       169 ~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~  246 (352)
                      .........|....+.+.++-++..+.+++..++.+..... .....+++.+.........+.+. .++..  ..++...
T Consensus        77 ~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  154 (222)
T TIGR00803        77 TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF--FIGYPTA  154 (222)
T ss_pred             ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCc--ccCCchH
Confidence            01112455677777788888888888888876654321111 11112222222121111111111 11110  1112223


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhh
Q 018663          247 GCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  314 (352)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~  314 (352)
                      .+..++.++++..+..+.+|+.++...++...++++++.+++++++||+++..+++|..+++.|+.++
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33334567788888999999999999999999999999999999999999999999999999997653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.72  E-value=2.7e-08  Score=78.75  Aligned_cols=107  Identities=12%  Similarity=0.197  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHH
Q 018663          212 ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTL  291 (352)
Q Consensus       212 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~  291 (352)
                      ++..++.++...+.....+..+.++....+.+...+..|+.+...++.+|.++++..++ .++.+..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            45556666666555543321122222222345556666776777999999999999995 88899999999999999999


Q ss_pred             hCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          292 LGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       292 l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      ++|+++..+++|.+++++|+.+..+.+-
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999988654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.68  E-value=3.2e-07  Score=85.36  Aligned_cols=137  Identities=15%  Similarity=0.123  Sum_probs=103.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHhHhhhhhccC----CCCCCCHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTS--DFVLIVYSNAFAAIFILLPSTFIYYRNR----TRPPLTVSIICKIFGLG   78 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~--~~~~~~~R~~~a~l~~l~~i~~~~~~~~----~~~~~~~~~~~~~~~~g   78 (352)
                      .+.++.++++++|+...+..|...++.-+  ......+-.+.+.+. +...........    .....+.+.+...+..|
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIP-FFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHH-HHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            57889999999999999999987644222  223333333333333 322222222111    00234567788888899


Q ss_pred             HHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           79 LIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        79 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ++. ...+.+++.++++.++++++.+..+.|+++.++++++++|+++..      +++|.++.++|+.+..
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence            998 899999999999999999999999999999999999999999999      9999999999997665

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.65  E-value=9.2e-07  Score=81.95  Aligned_cols=229  Identities=15%  Similarity=0.200  Sum_probs=127.0

Q ss_pred             HHHHHHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           73 KIFGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        73 ~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      .....|+.. ..+..+.+.|+.+.|.+..+.+..+.-++..+++..++|||++++      .+.|..+++.|..++....
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC
Confidence            334456665 778889999999999999999999999999999999999999999      9999999999998877543


Q ss_pred             CCccccCCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHH-------HHH
Q 018663          152 GPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQS-------TVV  224 (352)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~-------~~~  224 (352)
                      .++.+.. + ..+-.+  .-.+............ +...+.....+|..++. . .........+|+...       ..+
T Consensus       125 ~~~~~~~-t-~~~l~~--~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~~-i-~vyi~i~sl~Gs~tvl~~K~i~~~i  197 (300)
T PF05653_consen  125 PKEEPIH-T-LDELIA--LLSQPGFLVYFILVLV-LILILIFFIKPRYGRRN-I-LVYISICSLIGSFTVLSAKAISILI  197 (300)
T ss_pred             CCCCCcC-C-HHHHHH--HhcCcceehhHHHHHH-HHHHHHHhhcchhcccc-e-EEEEEEeccccchhhhHHHHHHHHH
Confidence            2211100 0 000000  0000111112222222 22222222222222211 0 100111111111111       011


Q ss_pred             HHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccch-HHHHHHHHHHHHhCCc--cch---
Q 018663          225 ALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL-GIVFAIIMGVTLLGDT--LYL---  298 (352)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l-~pv~~~~~~~l~l~E~--~s~---  298 (352)
                      .....++ +.+..  +..|..++ ..+.+......+.++++++.+++.+....+. ....+++-+.++++|.  .++   
T Consensus       198 ~~~~~g~-~~f~~--~~~y~l~~-~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~  273 (300)
T PF05653_consen  198 KLTFSGD-NQFTY--PLTYLLLL-VLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQI  273 (300)
T ss_pred             HHHhcCc-hhhhh--hHHHHHHH-HHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHH
Confidence            1111111 22221  11232222 2233445555556689999999987766554 4556677788888874  333   


Q ss_pred             -hhhhhHHHHHhhhhhhhccc
Q 018663          299 -GSVVGATIVAFGFYSVIWGQ  318 (352)
Q Consensus       299 -~~~iG~~lii~g~~l~~~~~  318 (352)
                       ....|..+++.|+.+....|
T Consensus       274 ~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  274 IGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHHhhheeeccC
Confidence             44578888999998876543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.64  E-value=4.3e-07  Score=75.59  Aligned_cols=134  Identities=19%  Similarity=0.246  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCC--------C--CCHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNK------GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP--------P--LTVS   69 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~------~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~--------~--~~~~   69 (352)
                      |.++.+.+.++-+...+..|..+++      ..+++.+..+-...+.++ +++.....++....+        +  .+.+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~-l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFII-LLPLAFLLEGPQLSSFFSEIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhHHHHhhhhhhcchHH
Confidence            4678899999999999999998866      589999999999999998 888877665433101        0  0235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhh
Q 018663           70 IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        70 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      .+...+..|+++...+...+..++++++-..+++...-.+.+.++++++++|+++..      ++.|+.++++|+++
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            567777788888999999999999999999999999999999999999999999999      99999999999854

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.58  E-value=1.8e-07  Score=87.05  Aligned_cols=139  Identities=17%  Similarity=0.143  Sum_probs=105.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCC--------CCCHHH-HHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP--------PLTVSI-ICK   73 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~-~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~--------~~~~~~-~~~   73 (352)
                      ..|.++.++++++|+...+..|...++ +.+|..+..+.+..+.+. +.|...........+        ...... +..
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFL-LSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHH-HHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            358889999999999999999998761 389999999999998888 888765433111000        001011 111


Q ss_pred             HHHHHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           74 IFGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        74 ~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      .+..+... ...+.+++.+++++++..+++.....|+++.++++++++|+++..      +++|..+.+.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            22333322 344467778999999999999999999999999999999999999      99999999999977763

specificities overlap.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.55  E-value=2e-08  Score=87.46  Aligned_cols=275  Identities=13%  Similarity=0.088  Sum_probs=184.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (352)
                      ..++.+++.++.||....++...   |-+|.+-..-- .++++. +..+.++.. .   |..+.+.+.--++.|.+..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGt-T~GALi-faiiv~~~~-~---p~~T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGT-TLGALI-FAIIVFLFV-S---PELTLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhc-cHHHHH-HHHHHheee-c---CccchhhHHHHHHhhhHhhhh
Confidence            45678899999999998876543   34454444333 333443 444333332 2   456667777888889888999


Q ss_pred             HHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceee----hHHhhhhhhhhhheecCCccccCC
Q 018663           85 QTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSI----GTMVSIAGALTVTLYKGPALVSMS  159 (352)
Q Consensus        85 ~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~i----g~~l~~~Gv~ll~~~~~~~~~~~~  159 (352)
                      |...+.|.++.+++.+..+.+ .+-+-+.+++.+.++|-.+..      +.+    ++++.++|+.+-...++ +..   
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~------~~IlG~iAliliviG~~lTs~~~~-~nk---  142 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT------QIILGFIALILIVIGIYLTSKQDR-NNK---  142 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch------hHHHHHHHHHHHHHhheEeeeecc-ccc---
Confidence            999999999999999999977 788889999999999988766      433    44556666655442221 110   


Q ss_pred             CCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 018663          160 SSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP  239 (352)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  239 (352)
                          ++    ++.+..-+|....+.|.++|-.|.++.+...-+--+..--.+.-+..+++.+.   . ...+.. .   .
T Consensus       143 ----~~----~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~---~-~~~~~~-~---~  206 (288)
T COG4975         143 ----EE----ENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILG---F-FKMEKR-F---N  206 (288)
T ss_pred             ----cc----cChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHh---h-cccccc-h---H
Confidence                00    23455778999999999999999999887764322224444555555544322   2 221111 0   0


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhh----hhHHHHHhhhhhhh
Q 018663          240 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFYSVI  315 (352)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~----iG~~lii~g~~l~~  315 (352)
                      +..|..+. -| +.=+++..++..+-++.|.++.=.+..+..+++.+-+.++++|+=+..++    +|.++++.|..+..
T Consensus       207 K~t~~nii-~G-~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         207 KYTWLNII-PG-LIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHHHHHh-hH-HHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            11122221 12 23356778888888999999988899999999999999999998886654    67788887776654


Q ss_pred             c
Q 018663          316 W  316 (352)
Q Consensus       316 ~  316 (352)
                      .
T Consensus       285 ~  285 (288)
T COG4975         285 I  285 (288)
T ss_pred             e
Confidence            3

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.42  E-value=8.2e-07  Score=69.89  Aligned_cols=68  Identities=12%  Similarity=0.044  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          249 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       249 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      .++.+.++++.++.+++++.+.+++-....+.++.+.+++++++||++++.+++|.+++++|+++...
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34467788999999999999999999999999999999999999999999999999999999987643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.38  E-value=5.4e-06  Score=76.74  Aligned_cols=129  Identities=12%  Similarity=-0.003  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHH---HHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVL---IVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLI   80 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~---~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~   80 (352)
                      .|+.+..+++++.++......|..  + .+|...   ..+-++++..+ +.+..   ++. + +. +.+.....+..|++
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~-~~~~~---~~~-~-~~-~~~~~~~~~~~Gi~  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGII-FNLGH---ILA-K-PL-KKYAILLNILPGLM  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHH-HHHHH---hcc-c-ch-HHHHHHHHHHHHHH
Confidence            689999999999999999999975  3 788877   44444444444 33322   111 1 22 23444456668888


Q ss_pred             HHHHHHHHHHhhc-ccCcchhhhhcchhHHHHHHHHHHHhhcccceeecccccee----ehHHhhhhhhhhhh
Q 018663           81 SCCVQTCLYVGIG-YSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKS----IGTMVSIAGALTVT  148 (352)
Q Consensus        81 ~~~~~~~~~~al~-~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~----ig~~l~~~Gv~ll~  148 (352)
                      ...++.+++.+.+ +.+++.++.+.+..|+...+++.+++||+.+.+      ++    +|.++.+.|+.++.
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            8888999999999 999999999999999999999999999999999      99    99999999987765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.37  E-value=6.8e-06  Score=75.32  Aligned_cols=132  Identities=17%  Similarity=0.172  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIV-YSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-   81 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~-~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   81 (352)
                      ..+..+.+.+.++|+...+..|... + .++..... +.+...... ..+.  ..... . .+.+.+.+......|+++ 
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~--~~~~~-~-~~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLL-LLLF--FLSGF-G-APILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHH-HHHH--Hhccc-c-ccCCHHHHHHHHHHHHHHH
Confidence            4688899999999999999999876 4 66766666 444422222 2222  11111 1 234557788888899998 


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..++.+++.+++..+++..+.+..+.|++..++++++++|+++.+      +++|.++.+.|+.+..
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~  286 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999999999999999999      9999999999987765

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.35  E-value=7.5e-06  Score=77.88  Aligned_cols=138  Identities=17%  Similarity=0.142  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHhHhhhhhccCC----------CCCCC
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNK------GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT----------RPPLT   67 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~------~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~----------~~~~~   67 (352)
                      ..|.++.++++++|+...+..|..+++      ..++.....+-...++++ ++|+.........          .....
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLI-SLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            458899999999999999999998854      145666666667788887 8877653321100          00111


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhh
Q 018663           68 V-SIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        68 ~-~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      . ..+...+..++.+...+.+.|.+++++++.+.++..++.|+++.++++++++|+++..      +++|.++.+.|+.+
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l  345 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL  345 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence            1 1122223333333555555667999999999999999999999999999999999999      99999999999976


Q ss_pred             hh
Q 018663          147 VT  148 (352)
Q Consensus       147 l~  148 (352)
                      ..
T Consensus       346 Ys  347 (350)
T PTZ00343        346 YS  347 (350)
T ss_pred             Hh
Confidence            54

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.31  E-value=3.4e-06  Score=66.42  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=61.5

Q ss_pred             HHHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           76 GLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        76 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..++++ ..+..++..++++.|.+.+..+.++.|+++.+++++++|||++++      +++|+.+.++|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            344455 889999999999999999999999999999999999999999999      9999999999998775

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.25  E-value=7.6e-06  Score=73.57  Aligned_cols=141  Identities=13%  Similarity=0.130  Sum_probs=112.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccc-cCCcchhhHHHHHHHHH
Q 018663          175 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR-LKPDTELIAIGCSAFFA  253 (352)
Q Consensus       175 ~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  253 (352)
                      ...|.++++.|-+.|++.....|-+ +..++ .++..++.+.+.+....+...+.+...-+. ...+..+......++ -
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~-~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~-l   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPA-TEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL-L   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-ccCCH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH-H
Confidence            3479999999999999998887765 45565 899999999999988777665543222122 122334555544443 5


Q ss_pred             HHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhccc
Q 018663          254 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  318 (352)
Q Consensus       254 ~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~  318 (352)
                      ....+..|.|+...-....+|.--++.|.+.+++|.++++|+++..|++...+-.+|+..-.+..
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            56889999999999999999999999999999999999999999999999999999998876544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.19  E-value=2e-05  Score=63.60  Aligned_cols=117  Identities=16%  Similarity=0.140  Sum_probs=90.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   83 (352)
                      ++++.+++..++-+...++.|..+++ .++...... . ...+.   ..        . .+      ...+..|++. ..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~~---~~--------~-~p------~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAALL---AF--------G-LA------LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHHH---HH--------h-cc------HHHHHHHHHHHHH
Confidence            47888888889999999999999866 544332221 1 11111   00        0 11      1245667777 89


Q ss_pred             HHHHHHHhhcccCcchhhhhcchhHHHHHHHHHH--HhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALI--SRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~--~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      +..++..+++..+.+.+..+.+..+.++.+.++.  ++||++++.      +++|+++.++|++++.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999899888885  899999999      9999999999998876

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.19  E-value=2.7e-05  Score=72.96  Aligned_cols=142  Identities=14%  Similarity=0.067  Sum_probs=111.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCC-CCCCHHHHHHHHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR-PPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~-~~~~~~~~~~~~~~g~~~   81 (352)
                      ..+|.++++.+++++|.+.++-+..+++ .+...+..+--+.+.++ ..+...+.+++... -+.+.+....++..++..
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii-~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFII-SGIQLAILERSGIESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHH-HHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence            4688999999999999999999999977 88888887777777777 77766666554331 223445544444444444


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecC
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKG  152 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~  152 (352)
                      +..+.+.-..+++++++...+=..++.+++.+...+++++++++.      .++|.++.++|.++....+.
T Consensus       244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEccCC
Confidence            666667778899999987777777899999999999999999999      99999999999988765443

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.09  E-value=3.7e-06  Score=74.31  Aligned_cols=137  Identities=14%  Similarity=0.172  Sum_probs=97.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHH-HHHHHH
Q 018663          174 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAI-GCSAFF  252 (352)
Q Consensus       174 ~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  252 (352)
                      ...+|..+...| ..+....++.++..++.|  .+.....+++--++..|....... + .|-....+.|..+ .++|. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p--~e~a~~r~l~~mlit~pcliy~~~-~-v~gp~g~R~~LiLRg~mG~-  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLENDP--MELASFRLLVRMLITYPCLIYYMQ-P-VIGPEGKRKWLILRGFMGF-  108 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccCh--hHhhhhhhhhehhhhheEEEEEee-e-eecCCCcEEEEEeehhhhh-
Confidence            567888888888 788888888888887755  444444444333333333222111 1 1222223334322 34443 


Q ss_pred             HHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          253 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       253 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                         .+.++.+|++++.+-+-++.+.+..|+++.+++|.+++|+.+....+|..+.+.|+++..+..-
T Consensus       109 ---tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  109 ---TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             ---hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence               5566777889999999999999999999999999999999999999999999999999876543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.03  E-value=2.3e-05  Score=71.29  Aligned_cols=227  Identities=13%  Similarity=0.118  Sum_probs=128.6

Q ss_pred             HHHHHHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           73 KIFGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        73 ~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      +....|++- ..+...-|.|+.+.|++..+.+..+.-+..++++..++|||+++.      ..+|..++++|..+++...
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEec
Confidence            344567777 888999999999999999999999999999999999999999999      9999999999999888543


Q ss_pred             CCccccCCCCCCC-CCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHH-------HH
Q 018663          152 GPALVSMSSSSNL-HNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQS-------TV  223 (352)
Q Consensus       152 ~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~-------~~  223 (352)
                      .++.+..  +..| ...  -.+..+ +.....+...++.=  ....|+...+.+ ++.........|..-.       ..
T Consensus       139 P~e~~i~--t~~el~~~--~~~~~F-liy~~~iil~~~il--~~~~~p~~g~tn-ilvyi~i~s~iGS~tV~svKalg~a  210 (335)
T KOG2922|consen  139 PKEQEIE--SVEEVWEL--ATEPGF-LVYVIIIILIVLIL--IFFYAPRYGQTN-ILVYIGICSLIGSLTVMSVKALGIA  210 (335)
T ss_pred             Ccccccc--cHHHHHHH--hcCccH-HHHHHHHHHHHHHH--heeecccccccc-eeehhhHhhhhcceeeeeHHHHHHH
Confidence            2221110  0000 000  001111 11111111111111  111221111111 1222222222221110       00


Q ss_pred             HHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEeeccch-HHHHHHHHHHHHhCCccc-----
Q 018663          224 VALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL-GIVFAIIMGVTLLGDTLY-----  297 (352)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l-~pv~~~~~~~l~l~E~~s-----  297 (352)
                      +-..+.+ .++...+  ..|..+.... .+........++|++..+++.++.+.+. -..++++-+.++++|.-.     
T Consensus       211 iklt~~g-~~ql~~~--~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~  286 (335)
T KOG2922|consen  211 IKLTFSG-NNQLFYP--LTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALD  286 (335)
T ss_pred             HHHHhcC-CcccccH--HHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence            1111221 1222221  2233333332 3445555556699999998887766554 455666778888887332     


Q ss_pred             -hhhhhhHHHHHhhhhhhhcc
Q 018663          298 -LGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       298 -~~~~iG~~lii~g~~l~~~~  317 (352)
                       .....|+..++.|+.+....
T Consensus       287 i~~~~~Gf~ti~~G~flL~~~  307 (335)
T KOG2922|consen  287 IAGELCGFVTIFLGIFLLHRT  307 (335)
T ss_pred             HHHHHHhHHHhhheeeEeeee
Confidence             24568899999998887543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.02  E-value=4.5e-05  Score=67.12  Aligned_cols=134  Identities=16%  Similarity=0.108  Sum_probs=112.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   83 (352)
                      -+..+.+.+..+|+..-+..|..-.. .+...-+..-+..++++ .+|+-.-....   .-++++.+...+..|+++ +.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAavi-v~Pig~~~ag~---~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALI-VLPIGAAQAGP---ALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHH-Hhhhhhhhcch---hhcChHHHHHHHHHHHHhccc
Confidence            35678899999999999999987644 55556667788899998 89886543322   235667778888899999 99


Q ss_pred             HHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      .+.+-..++...+...-+++.++.|.+..+.++++++|+++..      ||.++...+.++.-..+
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999999999999999999999      99999988887764443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.00  E-value=1.4e-05  Score=63.41  Aligned_cols=71  Identities=20%  Similarity=0.296  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          249 SAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       249 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      ..+...++++.++.+++|+++.+.+=.. .-+..+.+.+.+++++||++++.+++|..+|++|++..+...+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3455778999999999999998876444 4578888899999999999999999999999999988865443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.74  E-value=0.00017  Score=56.51  Aligned_cols=69  Identities=12%  Similarity=0.130  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHhccCCceEEeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhccc
Q 018663          250 AFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  318 (352)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~  318 (352)
                      .+.+.++++.++..++|+++.+.+=.. .-+..+.+.+.+++++||++++.+++|..+|++|+++.+...
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            355678899999999999998775443 556778889999999999999999999999999999986543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.66  E-value=0.00049  Score=64.10  Aligned_cols=126  Identities=17%  Similarity=0.141  Sum_probs=93.5

Q ss_pred             HHHHHHhhhhcCC---hhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhccC
Q 018663          192 LYIVQTSIIREYP---EELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  268 (352)
Q Consensus       192 ~~vl~k~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  268 (352)
                      +.+++++..++..   .+..+++.++.+..+...+.......+     ..+...+......+ +...++..+.+.+++++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-----KSRKIPLKKYAILS-FLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-----CCCcChHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            4456666655431   257888998888888777665543311     11111233334444 36677788899999999


Q ss_pred             CceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhh
Q 018663          269 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  323 (352)
Q Consensus       269 ~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~  323 (352)
                      +...-.+.....|+.++++++++++++.+..++++.+++.+|+.+....+.++.+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            9999999999999999999999999999999999999999999999876554443

; GO: 0055085 transmembrane transport

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.53  E-value=0.0005  Score=62.19  Aligned_cols=115  Identities=10%  Similarity=-0.045  Sum_probs=85.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISC   82 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (352)
                      ..|+...+++.++.+.....+.|..  + .+++....-. .++.++--.++....+++    ..+ |...+-...|++..
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~~--~-~~~~~~~lPq-aiGm~i~a~i~~~~~~~~----~~~-k~~~~nil~G~~w~  206 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKAF--H-VSGWSAFLPQ-AIGMLIGAFIFNLFSKKP----FFE-KKSWKNILTGLIWG  206 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhc--C-CChhHhHHHH-HHHHHHHHHHHhhccccc----ccc-cchHHhhHHHHHHH
Confidence            3578999999999999999998874  3 6666655433 233222022222222221    122 23356688899999


Q ss_pred             HHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccee
Q 018663           83 CVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLR  126 (352)
Q Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~  126 (352)
                      .++.+++.+.+..+.+.+-.+.++..+...+.+.+++|||-+.|
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            99999999999999999999999999999999999999999988

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.48  E-value=0.0014  Score=53.56  Aligned_cols=132  Identities=12%  Similarity=0.092  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHH
Q 018663          178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  257 (352)
Q Consensus       178 G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (352)
                      ..++++.++++-++-..+..++.++..+|...++..+..|++....+..+.++.  ++...+...|+  .|+|-+...+.
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHH
Confidence            356788888888998888888888877569999999999999988887766543  33322222233  33344455666


Q ss_pred             HHHHHHHhccCCceEEeecc-chHHHHHHHHHHH----HhCCccchhhhhhHHHHHhhhhh
Q 018663          258 SLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVT----LLGDTLYLGSVVGATIVAFGFYS  313 (352)
Q Consensus       258 ~~~~~~~l~~~~~~~~s~~~-~l~pv~~~~~~~l----~l~E~~s~~~~iG~~lii~g~~l  313 (352)
                      -.+..+..++.|++...... .-+-+.+.+++.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77778889999988765554 4456667777775    23578999999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.38  E-value=0.0003  Score=65.29  Aligned_cols=121  Identities=16%  Similarity=0.194  Sum_probs=88.3

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHH
Q 018663          173 KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFF  252 (352)
Q Consensus       173 ~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (352)
                      .++.+|..+++.|+++.+....++|+...+.+. ...-.-.                   ...+......|    +.|..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~-------------------~~~~~l~~~~W----~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS-------------------GGRSYLRRPLW----WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc-------------------hhhHHHhhHHH----HHHHH
Confidence            356789999999999999999999987655332 0000000                   00000000112    22333


Q ss_pred             HHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          253 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       253 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      ..+++..+.+.++...|++.++.+..+..++..+++..+++|+++...+.|+++++.|..+....
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            44566677888889999999999999999999999999999999999999999999999877654

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.26  E-value=0.00061  Score=52.40  Aligned_cols=67  Identities=21%  Similarity=0.321  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          251 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       251 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      +++..++|.+...++|+++...+ ++-.-+..+.+.+.++++++|++++.+++|..++++|++..+..
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34667889999999999887664 45566777888999999999999999999999999999988764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.25  E-value=0.0023  Score=49.90  Aligned_cols=65  Identities=18%  Similarity=0.208  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhh
Q 018663          251 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  315 (352)
Q Consensus       251 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~  315 (352)
                      +.+.++++.+...++|++|...+ ++-.-+..+.+.+.+++++||++++.+++|.++|+.|++..+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            44667899999999999997764 444556777889999999999999999999999999998864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.20  E-value=0.0021  Score=60.45  Aligned_cols=143  Identities=9%  Similarity=0.020  Sum_probs=91.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHH--HHHHHHHHH-HHHHhhcCC-CCccccCCcchhhHHHHH
Q 018663          174 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFIC--CVFVTIQST-VVALIAERN-PNSWRLKPDTELIAIGCS  249 (352)
Q Consensus       174 ~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (352)
                      ....|.++.+++++||+-..+-+|| .++.+  .+.. |-  .++.-++.. ..+.+..+. .......+...+ ...++
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~-~~~~l   78 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTL-LPVFL   78 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHH-HHHHH
Confidence            4568999999999999999999988 66655  3433 32  111111111 011112222 112222222223 33334


Q ss_pred             HHHHHHHHHHHHHHHhccCCceEE-eeccchHHHHHHHHHHHHhCCcc---c----hhhhhhHHHHHhhhhhhhcccchh
Q 018663          250 AFFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTL---Y----LGSVVGATIVAFGFYSVIWGQSEE  321 (352)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~~~~~~~l~l~E~~---s----~~~~iG~~lii~g~~l~~~~~~~~  321 (352)
                      +-..=.++...+..++|+.|.+.. .+..-++-+.+.+++.+++||-.   +    ....+|.+++++|+.+..+.-.++
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k  158 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLK  158 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            444667899999999999997774 55567888899999999999865   2    346689999999999998844333

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.15  E-value=0.0025  Score=49.46  Aligned_cols=66  Identities=18%  Similarity=0.291  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhc
Q 018663          251 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       251 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~  316 (352)
                      +.+.++++.+...++|++|...+ ++-.-+..+.+.+.+++++||++++.+++|..++++|++..+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            45678999999999999987764 4555577788899999999999999999999999999988754

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.05  E-value=0.0014  Score=51.24  Aligned_cols=110  Identities=17%  Similarity=0.154  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018663           11 VAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYV   90 (352)
Q Consensus        11 i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   90 (352)
                      ++..++||.+.++.|.+... .++..-.. |..-. .. .+    +         .++++...    =.++-.+...|++
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~-~~-~L----l---------~n~~y~ip----f~lNq~GSv~f~~   60 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQE-IK-FL----L---------LNPKYIIP----FLLNQSGSVLFFL   60 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHH-HH-HH----H---------HhHHHHHH----HHHHHHHHHHHHH
Confidence            45688999999999999755 44333322 32221 11 10    0         11122222    1223667788999


Q ss_pred             hhcccCcchhhhhc-chhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhh
Q 018663           91 GIGYSSPTLSSAIV-DLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTV  147 (352)
Q Consensus        91 al~~~~~~~a~~l~-~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll  147 (352)
                      .+...+.+.+..+. +++=++|++.++++.+|..+++      .++|+.+.++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            99999999999996 5788899999988888888888      999999999998654

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.02  E-value=0.0079  Score=49.43  Aligned_cols=138  Identities=13%  Similarity=0.081  Sum_probs=94.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHH
Q 018663          177 IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVAL  256 (352)
Q Consensus       177 ~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (352)
                      +..+.++.++++..+-.-...++.+...+|...++..+..|++.+..+..+.++ ...+.......|+..  .|-...++
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~--~GG~lGa~   81 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAW--IGGLLGAI   81 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHH--Hccchhhh
Confidence            567788889999999888888888888878999999999999999988887443 333332222223332  22223334


Q ss_pred             HHHHHHHHhccCCceE-EeeccchHHHHHHHHHHHHhC----CccchhhhhhHHHHHhhhhhhhcc
Q 018663          257 RSLAHTWACHKKGPVY-VSMYKPLGIVFAIIMGVTLLG----DTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       257 ~~~~~~~~l~~~~~~~-~s~~~~l~pv~~~~~~~l~l~----E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      --........+.|++. ......-+-+.+.+.+-+=+.    .+++...++|.+++++|+++..++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3445556778888665 444455566666777665333    588999999999999996555443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.98  E-value=0.0027  Score=48.22  Aligned_cols=57  Identities=23%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-eeccchHHHHHHHHHHHHhCCccchhhhhhHHHH
Q 018663          251 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIV  307 (352)
Q Consensus       251 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~li  307 (352)
                      +.+.++++.++.+++|+.+.+.+ .+...+..+.+.+.+++++||++|+.+++|..+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            44678999999999999998887 4556688899999999999999999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.93  E-value=0.0019  Score=60.04  Aligned_cols=138  Identities=14%  Similarity=0.185  Sum_probs=110.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHHH-hHhhhhhccCC---C-CCCCHHHHHHH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMN---KGTSDFVLIVYSNAFAAIFILL-PSTFIYYRNRT---R-PPLTVSIICKI   74 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~---~~~~~~~~~~~R~~~a~l~~l~-~i~~~~~~~~~---~-~~~~~~~~~~~   74 (352)
                      +..|.+..+.+.+..+.-.++.|..+.   +..+++....+-.-++.+. ++ |..........   . ...+.+.+...
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~-Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIF-LLIPFLDYVEGNKFVGFLTAPWFVTFLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHH-HhcchHhhhcccceeeeeccccchhhHHHH
Confidence            567899999999999999999999994   3489999998888888887 77 76555433222   1 13344444444


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           75 FGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      +.. ++..+.|...|+.++++++-+-++....--..+...++++++|+.++.      +..|..++++|+.+-.
T Consensus       240 ~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS  306 (316)
T ss_pred             HHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence            444 667888999999999999999999998888888889999999999999      9999999999997654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.90  E-value=0.0011  Score=59.77  Aligned_cols=68  Identities=18%  Similarity=0.155  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchh
Q 018663          254 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  321 (352)
Q Consensus       254 ~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~  321 (352)
                      ..+...+.+.++++.+|++..+......++++++++++++.+++..||++..+..+|+.+........
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            45667788899999999999999999999999999999999999999999999999999987765544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.90  E-value=0.0084  Score=46.79  Aligned_cols=63  Identities=16%  Similarity=0.133  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhh
Q 018663           79 LISCCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTV  147 (352)
Q Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll  147 (352)
                      +....++.+...++++.|.+.+=.+-. .--+.+.+.+.+++||++++.      ++.|+.+.+.|++.+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            333778889999999999998877755 777889999999999999999      999999999999775

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.78  E-value=0.0035  Score=49.11  Aligned_cols=62  Identities=26%  Similarity=0.298  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIV-DLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      ..++.++..++++.|.+.+-.+- ..--+.+.+.+++++||++++.      +++|+.+.++|++.+-+
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            77888889999999999888774 4777888999999999999999      99999999999988864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.76  E-value=0.0026  Score=50.50  Aligned_cols=63  Identities=16%  Similarity=0.127  Sum_probs=57.1

Q ss_pred             HHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhee
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIV-DLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLY  150 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~  150 (352)
                      ..+..++..++++.|.+.+-.+- ..--+.+.+.+.+++||++++.      +++|+.+.++|++.+-..
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhcC
Confidence            88899999999999999988885 5888899999999999999999      999999999999888643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.75  E-value=0.016  Score=47.43  Aligned_cols=130  Identities=15%  Similarity=0.144  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018663            7 TAVMVAVECLEVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (352)
Q Consensus         7 ~~~~i~~~~~wg~~~~~~k~~~~~~~~-~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (352)
                      .+..+++..+-+....++-.+.+. .+ |+.-.++-+..+.+. +..+....+++.. +..+ +.-++....|++++...
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~-~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFIL-LLIILLITGRPSL-ASLS-SVPWWAYLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHH-HHHHHHHhccccc-chhc-cCChHHhccHHHHHHHH
Confidence            456666777777777777666655 55 999999999999998 7776666555322 2221 22245566899999999


Q ss_pred             HHHHHhhcccCcchhhhhcch-hHHHHHHHHHH----HhhcccceeeccccceeehHHhhhhhhhh
Q 018663           86 TCLYVGIGYSSPTLSSAIVDL-TPAFTFILALI----SRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        86 ~~~~~al~~~~~~~a~~l~~~-~Pi~t~ila~~----~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      .+..+.....+++.+..+.-+ +-+...++-++    .-|+|++++      +..|+++.++|+.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            999999999999988888664 55566666664    466888888      99999999999853

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.61  E-value=0.0049  Score=47.80  Aligned_cols=61  Identities=10%  Similarity=0.028  Sum_probs=55.1

Q ss_pred             HHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..++.+...+++..|.+.+-.+-. .--+.+.+.+.+++||++++.      ++.|+.+.++|++.+-
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            788899999999999998877755 778889999999999999999      9999999999998774

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.56  E-value=0.0037  Score=48.13  Aligned_cols=61  Identities=18%  Similarity=0.126  Sum_probs=54.5

Q ss_pred             HHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..++.+.-.++++.|.+.+=.+-. .-.+.+.+.+++++||+.+..      +++|+.+.++|++.+-
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            778889999999999998876644 778889999999999999999      9999999999998775

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.23  E-value=0.31  Score=45.52  Aligned_cols=300  Identities=12%  Similarity=0.053  Sum_probs=164.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHh--hhhhccC--CCCCCCHHHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPST--FIYYRNR--TRPPLTVSIICKIFGLGL   79 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~--~~~~~~~--~~~~~~~~~~~~~~~~g~   79 (352)
                      +.+.+...++.++=|..++-.|..-+-....++++  ...++.+  ..|..  ++.-+..  .....+...+...+..|+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv--~gi~swl--i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV--QGIFSWL--IVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH--HHHHHHH--HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            35677888888888888888887643323333333  2233333  33322  1111110  012334467788888999


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhh-cchhHHHHHHHHHHHhhcccc-eeeccccceeehHHhhhhhhhhhheecCCcccc
Q 018663           80 ISCCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRMEKLD-LRVQSSLAKSIGTMVSIAGALTVTLYKGPALVS  157 (352)
Q Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~t~ila~~~l~ek~~-~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~  157 (352)
                      +...+...|=.+++|++.+...-+ ..+...+-.++-.++.++--. ..+......++|++++++|+.+.... +...+.
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~~Ke~  160 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-GSMKEK  160 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-HHhhhh
Confidence            999999999999999988866554 335555555554554332100 00112223788999999999888632 221111


Q ss_pred             CCCCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhh------c--CCh---hhHHHHHHHHHHHHHHHHHHH
Q 018663          158 MSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR------E--YPE---ELMATFICCVFVTIQSTVVAL  226 (352)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~------~--~~~---~~~~~~~~~~~~~v~~~~~~~  226 (352)
                       .  ..++    ..+....+|.++++.|.+..|..++-...-..      +  .++   ........+.-|.+.-++..+
T Consensus       161 -~--~~~~----~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~  233 (344)
T PF06379_consen  161 -E--LGEE----AKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCL  233 (344)
T ss_pred             -h--hccc----hhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHH
Confidence             0  0011    23456779999999999998888776532110      0  011   011223333344444444443


Q ss_pred             hh---cCCC---CccccCCcc--hhhHHHHHHHHHHHHHHHHHHHHhccCCce----EEeeccchHHHHHHHHHHHHhCC
Q 018663          227 IA---ERNP---NSWRLKPDT--ELIAIGCSAFFAVALRSLAHTWACHKKGPV----YVSMYKPLGIVFAIIMGVTLLGD  294 (352)
Q Consensus       227 ~~---~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~s~~~~l~pv~~~~~~~l~l~E  294 (352)
                      .-   .++.   .+.+...+.  ....+..++-.-=..++.+|-.+=.+.|+.    --.+.+.+..+++-+++.+ ++|
T Consensus       234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkE  312 (344)
T PF06379_consen  234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKE  312 (344)
T ss_pred             HHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHH
Confidence            31   1111   111111111  122222223223345555566666666643    3446677888888888885 777


Q ss_pred             ------ccchhhhhhHHHHHhhhhhhhc
Q 018663          295 ------TLYLGSVVGATIVAFGFYSVIW  316 (352)
Q Consensus       295 ------~~s~~~~iG~~lii~g~~l~~~  316 (352)
                            +.-...++|.++++.++.++-.
T Consensus       313 WKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  313 WKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             hccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence                  2334557888888888776643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.04  E-value=0.026  Score=52.86  Aligned_cols=143  Identities=12%  Similarity=0.068  Sum_probs=108.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHhHhhhhhccCC--CCCCCHHHHHHHHH
Q 018663            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKG---TSDFVLIVYSNAFAAIFILLPSTFIYYRNRT--RPPLTVSIICKIFG   76 (352)
Q Consensus         2 ~~~~~~~~~i~~~~~wg~~~~~~k~~~~~~---~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~--~~~~~~~~~~~~~~   76 (352)
                      |...|-++.+++++++|...++.|.-..+.   ++--.+-.+--++..++ ++|..++...-.+  .+-.+..+....+.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnlll-lwP~l~iL~~~~~e~F~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLL-LWPPLIILDFFGEERFELPSSTQFSLVVF  322 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH-HhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence            346788999999999999999999876442   56666666666777777 8866555433222  01112233445677


Q ss_pred             HHHHH-HHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheec
Q 018663           77 LGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYK  151 (352)
Q Consensus        77 ~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~  151 (352)
                      .++++ +.+..+|.+|.-.+++-.+++=.+++-...++.-.++.+.++++.      .++|.+..++|.+.+...+
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheeccc
Confidence            78888 999999999999999999999888766667777777878999999      9999999999988776443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.04  E-value=0.0044  Score=54.65  Aligned_cols=132  Identities=10%  Similarity=0.043  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHH
Q 018663          178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  257 (352)
Q Consensus       178 G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (352)
                      +.+.+++=++.|+.......|.-.+   |.+=+.. +.+|++++.+..+++......+     ..+. ..+.+-..=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lG-tT~GALifaiiv~~~~~p~~T~-----~~~i-v~~isG~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLG-TTLGALIFAIIVFLFVSPELTL-----TIFI-VGFISGAFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCCC---hhHhhhh-ccHHHHHHHHHHheeecCccch-----hhHH-HHHHhhhHhhhh
Confidence            4677888899999877776655433   2333233 3344444444444332111111     1122 223333345678


Q ss_pred             HHHHHHHhccCCceEEeeccc-hHHHHHHHHHHHHhCCccchhhh-h---hHHHHHhhhhhhhcccc
Q 018663          258 SLAHTWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGSV-V---GATIVAFGFYSVIWGQS  319 (352)
Q Consensus       258 ~~~~~~~l~~~~~~~~s~~~~-l~pv~~~~~~~l~l~E~~s~~~~-i---G~~lii~g~~l~~~~~~  319 (352)
                      +..++++++.+|.+++.-+.. .+-+-+.+++++.+||..++.++ +   ..++++.|+++..++++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            999999999999999876654 56677789999999999987765 3   46778889888776544

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.84  E-value=0.13  Score=46.36  Aligned_cols=178  Identities=11%  Similarity=-0.026  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018663            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (352)
Q Consensus         6 ~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (352)
                      ++++.+++.+++|..++-.|.-- . -|++.+.++....-.+. -+.+..+...    +++    ..+..+.|.+.+.++
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~-g~~v~~~~~~----p~f----~p~amlgG~lW~~gN   69 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLV-GLVVNLILGF----PPF----YPWAMLGGALWATGN   69 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHH-HHHHHHhcCC----Ccc----eeHHHhhhhhhhcCc
Confidence            46788999999999999999653 3 68888877766554444 4444333221    333    246677888889999


Q ss_pred             HHHHHhhcccCcchhhhhcchhHHHHH-HHHHH-HhhcccceeeccccceeehHHhhhhhhhhhheecCCccccC-----
Q 018663           86 TCLYVGIGYSSPTLSSAIVDLTPAFTF-ILALI-SRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSM-----  158 (352)
Q Consensus        86 ~~~~~al~~~~~~~a~~l~~~~Pi~t~-ila~~-~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~~~~~~-----  158 (352)
                      .+..-.++..+.+....+-++.-..+. ..+++ +++++.... .......+|++++++|..+..+.+.+.....     
T Consensus        70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~  148 (254)
T PF07857_consen   70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEE  148 (254)
T ss_pred             eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCccccccc
Confidence            999999999999999999886444433 33333 444333321 1223388899999999988876654331110     


Q ss_pred             ----CCCCCCCCc------cCC------CCCcchhHHHHHHHHHHHHHHHHHH
Q 018663          159 ----SSSSNLHNE------LRS------PQKNWIIGGLVLAAGSFFLSLLYIV  195 (352)
Q Consensus       159 ----~~~~~~~~~------~~~------~~~~~~~G~~~~l~aa~~~a~~~vl  195 (352)
                          .+++++..+      .++      ...+...|.++++.+++.|+...+=
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvP  201 (254)
T PF07857_consen  149 TPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVP  201 (254)
T ss_pred             cccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccch
Confidence                011111000      001      1113567888888888888874433

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.76  E-value=0.019  Score=43.58  Aligned_cols=53  Identities=15%  Similarity=0.029  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhcccceeeccccceeehHHh
Q 018663           81 SCCVQTCLYVGIGYSSPTLSSAIV-DLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMV  139 (352)
Q Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l  139 (352)
                      ...+..++..++++.|.+.+-.+. .+..+.+.+.+.+++||++|+.      ++.|+.+
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            378889999999999999996664 5899999999999999999999      9998865

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.49  E-value=0.049  Score=42.66  Aligned_cols=109  Identities=10%  Similarity=-0.007  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 018663          184 AGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTW  263 (352)
Q Consensus       184 ~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (352)
                      +-+++|+..+.+.||-.+..+++-.. . +..-....     .+     .+|..        .  .....+..+..+|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll-----~n~~y--------~--ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LL-----LNPKY--------I--IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HH-----HhHHH--------H--HHHHHHHHHHHHHHH
Confidence            34788999999999988776542222 1 21111111     11     11211        1  133456678889999


Q ss_pred             HhccCCceEEeecc-chHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhh
Q 018663          264 ACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  314 (352)
Q Consensus       264 ~l~~~~~~~~s~~~-~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~  314 (352)
                      .+++.+-+.+..+. .+.=+++++.+++..+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999998884 8999999999998888888899999999999998753

Many members are annotated as potential transmembrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.20  E-value=0.49  Score=44.23  Aligned_cols=140  Identities=16%  Similarity=0.058  Sum_probs=90.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhcCC---hhhHHHHHHHHHHHHHHHHHHHhhcCC-CCccccC-------CcchhhH
Q 018663          177 IGGLVLAAGSFFLSLLYIVQTSIIREYP---EELMATFICCVFVTIQSTVVALIAERN-PNSWRLK-------PDTELIA  245 (352)
Q Consensus       177 ~G~~~~l~aa~~~a~~~vl~k~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-------~~~~~~~  245 (352)
                      .=.+..+...+.++......|...+..+   .|.+..+..-++-.++.....+.-++. ...+...       ...+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3445555566666666666665544321   136666777777666665555533211 0111110       1101111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          246 IGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      ...=+ +...+-.-+++.++++.+|++..+...+....++++.+++++++++..||....+...|+.+++..
T Consensus        95 ~~vPa-~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   95 VSVPA-LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHH-HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            11111 123344457789999999999999999999999999999999999999999999999999999843

>TIGR00803 nst UDP-galactose transporter

Probab=94.85  E-value=0.075  Score=46.98  Aligned_cols=64  Identities=14%  Similarity=0.183  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhh
Q 018663           76 GLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGAL  145 (352)
Q Consensus        76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~  145 (352)
                      ...+..+..+.+..+-++|.++..-+....+.++++.+++.++++|+++..      ++.|+.+.+.|+.
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~  220 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF  220 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence            334445778888999999999999999999999999999999999999999      9999999988764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.49  E-value=0.46  Score=43.48  Aligned_cols=136  Identities=12%  Similarity=0.081  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCC-----CCCHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP-----PLTVSIICKIFGL   77 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~-~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~-----~~~~~~~~~~~~~   77 (352)
                      ..|+.++..-.++=|+....-...... .++++++++.-++..++. -.......+ ..+ +     +..++.++-++..
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~-~~~~li~qg-~~~-~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAIL-NGTYLILQG-HLL-PAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHH-HHHhhhcCC-CCc-hHHHHHHcChhHHHHHHHH
Confidence            355666666666666666666655543 489999999999998887 665533322 222 1     1234556777888


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           78 GLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        78 g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ..+++.+|.+.|.-++.-++-.-+.+..+==++..+++.+.++.++++.      +|.|+.+.+.|..+=.
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI  312 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999      9999998888775433

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.44  E-value=0.26  Score=44.42  Aligned_cols=126  Identities=13%  Similarity=0.141  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCC-CCccccCCcchh-----hHHHHHHH
Q 018663          178 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDTEL-----IAIGCSAF  251 (352)
Q Consensus       178 G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~  251 (352)
                      |.+.++.|+++++-..+=.||.... |. +....+++....+...++....+.. ...|-......|     ...-..=.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g-Dg-~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~   78 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG-DG-FFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT   78 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC-Cc-HHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence            5567788899999888887876644 33 6666666655555555444433211 111110000000     00111111


Q ss_pred             HHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHH-HhCC---cc--chhhhhhHHHHHhhhhhhhcccch
Q 018663          252 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVT-LLGD---TL--YLGSVVGATIVAFGFYSVIWGQSE  320 (352)
Q Consensus       252 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l-~l~E---~~--s~~~~iG~~lii~g~~l~~~~~~~  320 (352)
                      ++-++++..|.               ..+-+.+-..+-+ ++|+   .+  .+..++|.+++++|..++..-|.+
T Consensus        79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            23344444442               2233333333322 3333   33  367889999999999888765443

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.74  E-value=0.014  Score=53.57  Aligned_cols=128  Identities=15%  Similarity=0.233  Sum_probs=94.8

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCcchhhHHHHHHH
Q 018663          172 QKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAF  251 (352)
Q Consensus       172 ~~~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (352)
                      +.++.+|.++++.|.+..+...++.||..++...    ..              .-...+.......      .+-+.|.
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~--------------~ra~~gg~~yl~~------~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG--------------LRAGEGGYGYLKE------PLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc--------------ccccCCCcchhhh------HHHHHHH
Confidence            4567789999999999999999998887665221    00              0011111122111      1224556


Q ss_pred             HHHHHHHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccchhhh
Q 018663          252 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  323 (352)
Q Consensus       252 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~~~~~  323 (352)
                      +..+++-.+.+.+....+++.++.+..+..+...+++..+++|.+++.-.+|+++.++|..+...+-.++++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~  143 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE  143 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence            667777888888888899999999999999999999999999999999999999999998887765544443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.37  E-value=0.79  Score=37.77  Aligned_cols=136  Identities=14%  Similarity=0.047  Sum_probs=85.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCC   83 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   83 (352)
                      ....+..+.+..+-..-..++--+.+..-+|..-.+..+..+.++ +..+.+...+... .....+..++.+.-|++++.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~-L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lGa~   81 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVL-LLILLLIKQGHPG-LAAVASAPWWAWIGGLLGAI   81 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHH-HHHHHHHhcCCCc-hhhccCCchHHHHccchhhh
Confidence            344555556666555555555555444235889999999998888 7776666332211 22223334577778888877


Q ss_pred             HHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHH-Hh---hcccceeeccccceeehHHhhhhhhhhh
Q 018663           84 VQTCLYVGIGYSSPTLSSAIV-DLTPAFTFILALI-SR---MEKLDLRVQSSLAKSIGTMVSIAGALTV  147 (352)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~l~-~~~Pi~t~ila~~-~l---~ek~~~~~~~~~~~~ig~~l~~~Gv~ll  147 (352)
                      .-..........+++....+. .-+-+...++-.+ ++   +.+++..      ++.|+++.++|+.++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence            777777777777776665554 3455555555554 22   3566666      999999999995443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.46  E-value=0.8  Score=42.26  Aligned_cols=137  Identities=14%  Similarity=0.112  Sum_probs=102.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhHhhhhhccC----CCC-CCCHHHHHHHHHHH
Q 018663            5 GVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRNR----TRP-PLTVSIICKIFGLG   78 (352)
Q Consensus         5 ~~~~~~i~~~~~wg~~~~~~k~~~~~-~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~----~~~-~~~~~~~~~~~~~g   78 (352)
                      .+|..+....+.-+......|.-.+. +.+.+.++++..+.+... +....+......    ..+ ..+...+....+.|
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~-l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPP-LLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHH-HHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            46777777777777777888877644 377888888998888776 655544433210    001 11234567778888


Q ss_pred             HHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           79 LISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      +++.+-+++.++-.++.++...++.....-..+.+...++.+++.++.      ..+|+.+++.|.+.-.
T Consensus       236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence            888888999999999999999999986666777777778888999999      9999999999987654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.55  E-value=0.1  Score=44.68  Aligned_cols=63  Identities=16%  Similarity=0.190  Sum_probs=57.7

Q ss_pred             HHHHHHHHhccCCceEEeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          257 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       257 ~~~~~~~~l~~~~~~~~s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      +.+.|..++++++|+.++.+..-.-.+..+++|+.++|++....++..++-+.|+++..+.++
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            466788999999999999999999999999999999999999999999999999988876544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.99  E-value=0.38  Score=42.44  Aligned_cols=72  Identities=17%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhh
Q 018663           69 SIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALT  146 (352)
Q Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~l  146 (352)
                      ..+..+...++.+++++.+.|.-..+-++-.-+++..+--+||.+.+.++++.+++.+      +|.|..+.+.|...
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhh
Confidence            3456777888888999999999999999999999999999999999999999999999      99999999888644

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.31  E-value=4.1  Score=37.57  Aligned_cols=138  Identities=17%  Similarity=0.146  Sum_probs=89.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcC----CChHHHHHHHHHHHHHHHHHhHhhhhhccCCC------CCC----CH
Q 018663            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKG----TSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR------PPL----TV   68 (352)
Q Consensus         3 ~~~~~~~~i~~~~~wg~~~~~~k~~~~~~----~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~------~~~----~~   68 (352)
                      +..|..+...+.++-|.-|.+.++.+...    -+|+....--.-...+. ++|..+...+..+.      +.+    -.
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~-Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~  240 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIG-LLPLSLLFEGLHLITSSSIFRFQDTGLIL  240 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHH-HHHHHHHHcccccchhhhHHHhcCccHHH
Confidence            34678889999999999999999998652    24555554443344444 44444443322110      011    12


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhh
Q 018663           69 SIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTV  147 (352)
Q Consensus        69 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll  147 (352)
                      +....+...|...+..-.+-|.=+..+++-..++..---=+.+.+++....+|+++..      .|.|..++..|+..=
T Consensus       241 rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  241 RVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence            3333444444444444445555566666666666666677889999999999999988      999999999998654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=89.95  E-value=1.4  Score=41.16  Aligned_cols=145  Identities=14%  Similarity=0.111  Sum_probs=86.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHH--hhcCCC-CccccCCcchhhHHHHHH
Q 018663          174 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVAL--IAERNP-NSWRLKPDTELIAIGCSA  250 (352)
Q Consensus       174 ~~~~G~~~~l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~  250 (352)
                      ....|.++..+++++.+.+.+=.||. |+++  .+.......+-+-+..|...  +.-++. .-....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            45689999999999999988888875 4444  44443333333333344432  222221 111222222333333333


Q ss_pred             HHHHHHHHHHHHHHhccCCceE-EeeccchHHHHHHHHHHHHhCC-------ccchhhhhhHHHHHhhhhhhhcccchhh
Q 018663          251 FFAVALRSLAHTWACHKKGPVY-VSMYKPLGIVFAIIMGVTLLGD-------TLYLGSVVGATIVAFGFYSVIWGQSEEE  322 (352)
Q Consensus       251 ~~~~~~~~~~~~~~l~~~~~~~-~s~~~~l~pv~~~~~~~l~l~E-------~~s~~~~iG~~lii~g~~l~~~~~~~~~  322 (352)
                      + -=+++-+.|-.++|++|.+- .++..-+.-+++.++--++.|+       +-....++|.++.++|+.+.-+.-.+|+
T Consensus        81 ~-lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 V-LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             H-HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            3 44567778888999999654 4555556666666665555432       2235678999999999999877544443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=86.37  E-value=0.7  Score=42.36  Aligned_cols=131  Identities=8%  Similarity=-0.051  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhcCChhhHHHHHHHHHHHHHHHHHHHhhcCC--------CCccccCCcchhhH--HHHHHHH
Q 018663          183 AAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN--------PNSWRLKPDTELIA--IGCSAFF  252 (352)
Q Consensus       183 l~aa~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~  252 (352)
                      +++.+||+-....+|...++... .+...|=..++.++...+..++-+.        ++-+.......|..  .++.|.+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence            45778888888887776654432 2223333334444333333222111        11111111122332  3444555


Q ss_pred             HHHHHHHHHHHHhccCCceEEeecc-chHHHHHHHHHHHHhCCccc--hhhhhhHHHHHhhhhhhh
Q 018663          253 AVALRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTLY--LGSVVGATIVAFGFYSVI  315 (352)
Q Consensus       253 ~~~~~~~~~~~~l~~~~~~~~s~~~-~l~pv~~~~~~~l~l~E~~s--~~~~iG~~lii~g~~l~~  315 (352)
                      .--++.++-.+++...|-+.+-.+. .+..++++.+.++ ++.+.+  ...+.|.+++++++.+-.
T Consensus        81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga  145 (336)
T PF07168_consen   81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA  145 (336)
T ss_pred             hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence            5567777888888777766544333 3344456666664 455554  245678888888877643

Transport is dependent on glucose and a proton gradient [].

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=83.95  E-value=2.8  Score=38.06  Aligned_cols=143  Identities=18%  Similarity=0.098  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhHhhhhhccC--C-CCCC-CHHHHHHHHHHH
Q 018663            4 VGVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRNR--T-RPPL-TVSIICKIFGLG   78 (352)
Q Consensus         4 ~~~~~~~i~~~~~wg~~~~~~k~~~~~-~~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~--~-~~~~-~~~~~~~~~~~g   78 (352)
                      ..|.++-+.+.+.-+...+-.|..+.. +-..+.+.++....+.++ ++|...+.+.-.  + .+++ ..+.|..+.+.|
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lL-flpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLL-FLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHH-HHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            467888899999999999999976644 223677888889998888 998876655311  1 1233 567788888888


Q ss_pred             HHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhheecCC
Q 018663           79 LISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGP  153 (352)
Q Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~~~~  153 (352)
                      ++|+.-+..-.+=++.++|-+--+=...-...=.+++..+.+|..+..      .|.+-++.++|...-...++.
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHHH
Confidence            888555555555566665544333333444556678889999999998      999999999988777655543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=83.83  E-value=3.3  Score=36.38  Aligned_cols=110  Identities=17%  Similarity=0.200  Sum_probs=87.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHhHhhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhH
Q 018663           32 TSDFVLIVYSNAFAAIFILLPSTFIYYRNRT---RPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTP  108 (352)
Q Consensus        32 ~~~~~~~~~R~~~a~l~~l~~i~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P  108 (352)
                      ...+..+++..+++..+ +.........+..   ...++...+...++.|++.++-..+.-|-++.++++..+.+..+.-
T Consensus       183 f~d~dtmfYnNllslPi-L~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK  261 (309)
T COG5070         183 FKDFDTMFYNNLLSLPI-LLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK  261 (309)
T ss_pred             cchhhHHHHhhhHHHHH-HHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence            66788889999999888 7776655543321   1234445577888999988888888889999999999999999988


Q ss_pred             HHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663          109 AFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus       109 i~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      ....+.+.++++|+.++.      .+..+.+++...++-.
T Consensus       262 lp~alaGlvffdap~nf~------si~sillGflsg~iYa  295 (309)
T COG5070         262 LPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA  295 (309)
T ss_pred             ChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence            888999999999999999      9999988877665544

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=83.57  E-value=18  Score=27.82  Aligned_cols=112  Identities=18%  Similarity=0.159  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHhHhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018663            8 AVMVAVECLEVGSSTLNKAAMNKGTS------DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (352)
Q Consensus         8 ~~~i~~~~~wg~~~~~~k~~~~~~~~------~~~~~~~R~~~a~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (352)
                      ..++...++||.+.++.|-.... .+      .....+.|-.....                  .+++++..+ .   ++
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~g-~~~v~~~~~k~~~~lqe~~tl~------------------l~w~Y~iPF-l---lN   62 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSLG-WDKVKSSSRKIMIALQEMKTLF------------------LNWEYLIPF-L---LN   62 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHhh-HhhccCchHHHHHHHHHHHHHH------------------HhHHHHHHH-H---HH
Confidence            45778899999999999987532 22      22233333322211                  122333322 1   23


Q ss_pred             HHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhh
Q 018663           82 CCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVT  148 (352)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~  148 (352)
                      -.+..+||+-+++++-+.+..+.+ ++-.|+.+.+..+..|....+      .+.|..+.++|..+.+
T Consensus        63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhee
Confidence            445667999999999999998877 577778888877655555555      7889999888876543

>PRK02237 hypothetical protein; Provisional

Probab=81.36  E-value=4.3  Score=31.33  Aligned_cols=46  Identities=13%  Similarity=0.135  Sum_probs=40.0

Q ss_pred             eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcccc
Q 018663          274 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  319 (352)
Q Consensus       274 s~~~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~~  319 (352)
                      +.+.-...+.+.++++..-+++|+...++|.+++++|+.+..+.+|
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4566778888999999999999999999999999999988866554

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=81.04  E-value=1.7  Score=33.34  Aligned_cols=30  Identities=17%  Similarity=0.150  Sum_probs=26.3

Q ss_pred             HHHHHHHhCCccchhhhhhHHHHHhhhhhh
Q 018663          285 IIMGVTLLGDTLYLGSVVGATIVAFGFYSV  314 (352)
Q Consensus       285 ~~~~~l~l~E~~s~~~~iG~~lii~g~~l~  314 (352)
                      +.+++++++|++.+.+..|.++++.+++..
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            566788999999999999999999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	352
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 55/377 (14%), Positives = 97/377 (25%), Gaps = 147/377 (38%)

Query: 52  PS----TFIYYRNRTR------PPLTVSIICKIFGLGLISCCVQTCL-------YV---- 90
           PS     +I  R+R            VS +     L       +  L        V    
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL-------RQALLELRPAKNVLIDG 157

Query: 91  --GIGYSSPTLSSAIV---DLTPAFTF-IL-----------ALISRMEKLDLRVQSSLAK 133
             G G +   ++  +     +     F I             ++  ++KL  ++  +   
Sbjct: 158 VLGSGKT--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 134 SIGTMVSI-------AGALTVTL----YKGPALVSMSSSSNLHNELRSPQKNWIIGG--- 179
                 +I          L   L    Y+   LV           L + Q          
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-----------LLNVQNAKAWNAFNL 264

Query: 180 ----LVL---AAGSFFLSLLYIVQTSIIRE----YPEELMATFICCVFVTIQS------- 221
               L+       + FLS       S+        P+E+ +  +  +    Q        
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 222 ---TVVALIAER---NPNSW----RLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV 271
                +++IAE       +W     +  D     I  S      L  L        +   
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS------LNVL--------EPAE 370

Query: 272 YVSMYKPLGIVF---AIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDK 328
           Y  M+  L + F   A I  + L                     S+IW    +    D  
Sbjct: 371 YRKMFDRLSV-FPPSAHIPTILL---------------------SLIWFDVIKS---DVM 405

Query: 329 DI-DSLKSSSPKAPLLQ 344
            + + L   S    L++
Sbjct: 406 VVVNKLHKYS----LVE 418

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	352
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.04
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.63
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.23
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.19

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.04  E-value=1.4e-10  Score=93.45  Aligned_cols=71  Identities=11%  Similarity=0.125  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhccc
Q 018663          248 CSAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  318 (352)
Q Consensus       248 ~~~~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~~  318 (352)
                      .+++++++++|.+|.+++|+.+++++..+ ..+.|+++++++++++||++++.+++|.++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            36677899999999999999999999998 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.63  E-value=4e-08  Score=76.19  Aligned_cols=70  Identities=11%  Similarity=0.125  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHhhhhhhhcc
Q 018663          248 CSAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  317 (352)
Q Consensus       248 ~~~~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~~~~~~~l~l~E~~s~~~~iG~~lii~g~~l~~~~  317 (352)
                      ..++++.+++|.++.+++|+.+.+++..+ ..+.|+.+.+++++++||++++.+++|.++|++|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35667889999999999999999999888 89999999999999999999999999999999999998764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.23  E-value=5.5e-06  Score=64.03  Aligned_cols=68  Identities=25%  Similarity=0.267  Sum_probs=62.0

Q ss_pred             HHHHHH-HHHHHHHHHhhcccCcchhhhh-cchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhe
Q 018663           76 GLGLIS-CCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTL  149 (352)
Q Consensus        76 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~  149 (352)
                      +.+++. ..++.++..++++.|.+.+..+ ..+.|+++.+++++++||++++.      +++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            455555 8889999999999999999998 78999999999999999999999      99999999999988864

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.19  E-value=1.4e-06  Score=69.94  Aligned_cols=69  Identities=25%  Similarity=0.263  Sum_probs=52.3

Q ss_pred             HHHHHH-HHHHHHHHHhhcccCcchhhhh-cchhHHHHHHHHHHHhhcccceeeccccceeehHHhhhhhhhhhhee
Q 018663           76 GLGLIS-CCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRMEKLDLRVQSSLAKSIGTMVSIAGALTVTLY  150 (352)
Q Consensus        76 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~t~ila~~~l~ek~~~~~~~~~~~~ig~~l~~~Gv~ll~~~  150 (352)
                      +.+++. .+++.+++.++++.+++.+..+ .++.|+++.++++++++|++++.      +++|+++.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcC
Confidence            455665 8899999999999999999999 89999999999999999999999      999999999999988743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00