Citrus Sinensis ID: 018696
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | 2.2.26 [Sep-21-2011] | |||||||
| O82616 | 324 | Putative fructokinase-5 O | no | no | 0.900 | 0.975 | 0.679 | 1e-125 | |
| Q42896 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.894 | 0.957 | 0.655 | 1e-121 | |
| Q0JGZ6 | 323 | Fructokinase-1 OS=Oryza s | no | no | 0.900 | 0.978 | 0.647 | 1e-121 | |
| Q7XJ81 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.894 | 0.957 | 0.655 | 1e-120 | |
| A2WXV8 | 323 | Fructokinase-1 OS=Oryza s | N/A | no | 0.900 | 0.978 | 0.644 | 1e-120 | |
| Q6XZ79 | 323 | Fructokinase-1 OS=Zea may | N/A | no | 0.897 | 0.975 | 0.649 | 1e-120 | |
| Q9SID0 | 325 | Probable fructokinase-1 O | no | no | 0.871 | 0.941 | 0.668 | 1e-120 | |
| Q9M1B9 | 326 | Probable fructokinase-4 O | no | no | 0.894 | 0.963 | 0.648 | 1e-119 | |
| Q9LNE3 | 329 | Probable fructokinase-2 O | no | no | 0.923 | 0.984 | 0.638 | 1e-119 | |
| Q9LNE4 | 345 | Probable fructokinase-3 O | no | no | 0.894 | 0.910 | 0.645 | 1e-117 |
| >sp|O82616|SCRK5_ARATH Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 257/318 (80%), Gaps = 2/318 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVP GVSLAE+ F KAPGGAPANVA I++LGG SAF+GK GDDEF
Sbjct: 6 LIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGDDEF 65
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+ML NILK+N V++ GV +D+ ARTALAFVTL+ DGEREF+F+R+PSADMLL ESEL+K
Sbjct: 66 GHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESELNK 125
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LIK+ IFHYGSISLI+EPCR+ +AAM AK++G +LSYDPN+RLPLWPS EAA EGI
Sbjct: 126 DLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGI 185
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
SIW++ADIIKVSDDE+TFLT GD DD V+ L H LKLLIVT+G KGCRYYTK+F
Sbjct: 186 KSIWNEADIIKVSDDEVTFLTRGDAEKDDVVL--SLMHDKLKLLIVTDGEKGCRYYTKKF 243
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KGRVPG KAVDTTGAGDSFV L L D +++ DE +L+EAL FANACGA+ T++
Sbjct: 244 KGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQK 303
Query: 330 GAIPALPTKEAALKLLHT 347
GAIPALPT A KL+ +
Sbjct: 304 GAIPALPTPADAQKLMKS 321
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4 |
| >sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/316 (65%), Positives = 250/316 (79%), Gaps = 2/316 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPTV GVSLAEAP F KAPGGAPANVA+ ++RLGG SAFVGKLGDDEF
Sbjct: 11 LIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEF 70
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA ILK N V G+ +D ARTALAFVTLRADGEREF+F+R+PSADMLL +EL+
Sbjct: 71 GHMLAGILKTNGVQAEGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNL 130
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LI+ +FHYGSISLI EPCR+ + AM +AKE+G++LSYDPNLRLPLWPS E A++ I
Sbjct: 131 DLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQI 190
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
SIWD AD+IKVSD E+ FLTG + +D++ + L+HPNLKLL+VT G KGC YYTK+F
Sbjct: 191 KSIWDSADVIKVSDVELEFLTGSNKIDDESAM--SLWHPNLKLLLVTLGEKGCNYYTKKF 248
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
G V G K VDTTGAGDSFV +L + DQ +++DE RL+E L F+ ACGA+T T++
Sbjct: 249 HGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKK 308
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT AL LL
Sbjct: 309 GAIPALPTASEALTLL 324
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q0JGZ6|SCRK1_ORYSJ Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/318 (64%), Positives = 256/318 (80%), Gaps = 2/318 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
LVV FGEMLIDFVPTV GVSLAEAPAF KAPGGAPANVA+ ++RLGG +AFVGKLGDDEF
Sbjct: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 66
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G MLA IL++N VD GV +D+ ARTALAFVTLRADGEREF+F+R+PSADMLL +EL+
Sbjct: 67 GRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNV 126
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
LIK+ ++FHYGSISLIAEPCRS L AM +AKE+G++LSYDPNLR LWPS E AR I
Sbjct: 127 ELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKI 186
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+SIWDQADI+KVS+ E+ FLTG D DD V+ KL+ P +KLL+VT G +GC+YY ++F
Sbjct: 187 LSIWDQADIVKVSEVELEFLTGIDSVEDD--VVMKLWRPTMKLLLVTLGDQGCKYYARDF 244
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+G VP K + VDTTGAGD+FV +L + D + ++D+ +L EA+ FANACGA+T T++
Sbjct: 245 RGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKK 304
Query: 330 GAIPALPTKEAALKLLHT 347
GAIP+LPT+ LKL+ +
Sbjct: 305 GAIPSLPTEVEVLKLMES 322
|
May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/316 (65%), Positives = 249/316 (78%), Gaps = 2/316 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPTV GVSLAEAP F KAPGGAPANVA+ ++RLGG SAFVGKLGDDEF
Sbjct: 11 LIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGRSAFVGKLGDDEF 70
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA ILK N V G+ +D ARTALAFVTLRADGEREF+F+R+PSADMLL +EL+
Sbjct: 71 GHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNL 130
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LI+ +FHYGSISLI EPCR+ + AM +AKE+G++LSYDPNLRLPLWPS E A++ I
Sbjct: 131 DLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQI 190
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
SIWD AD+IKVSD E+ FLTG + +D++ + L+HPNLKLL+VT G KGC YYTK+F
Sbjct: 191 KSIWDSADVIKVSDVELEFLTGSNKIDDESAM--SLWHPNLKLLLVTLGEKGCNYYTKKF 248
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
G V G K VDTTGAGDSFV +L + DQ ++ DE RL+E L F+ ACGA+T T++
Sbjct: 249 HGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKK 308
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT AL LL
Sbjct: 309 GAIPALPTASEALTLL 324
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum habrochaites (taxid: 62890) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|A2WXV8|SCRK1_ORYSI Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/318 (64%), Positives = 255/318 (80%), Gaps = 2/318 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
LVV FGEMLIDFVPTV GVSLAEAPAF KAPGGAPANVA+ ++RLGG +AFVGKLGDDEF
Sbjct: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 66
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G MLA IL++N VD GV +D+ ARTALAFVTLRADGEREF+F+R+PSADMLL +EL+
Sbjct: 67 GRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNV 126
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
LIK+ ++FHYGSISLIAEPCRS L AM +AKE+G++LSYDPNLR LWPS E AR I
Sbjct: 127 ELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKI 186
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+SIWD ADI+KVS+ E+ FLTG D DD V+ KL+ P +KLL+VT G +GC+YY ++F
Sbjct: 187 LSIWDHADIVKVSEVELEFLTGIDSVEDD--VVMKLWRPTMKLLLVTLGDQGCKYYARDF 244
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+G VP K + VDTTGAGD+FV +L + D + ++D+ +L EA+ FANACGA+T T++
Sbjct: 245 RGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKK 304
Query: 330 GAIPALPTKEAALKLLHT 347
GAIP+LPT+ LKL+ +
Sbjct: 305 GAIPSLPTEVEVLKLMES 322
|
May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q6XZ79|SCRK1_MAIZE Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/317 (64%), Positives = 253/317 (79%), Gaps = 2/317 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
LVV FGEMLIDFVPTV GVSLAEAPAF KAPGGAPANVA+ +SRLGG +AFVGKLGDDEF
Sbjct: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFLKAPGGAPANVAIAVSRLGGGAAFVGKLGDDEF 66
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G MLA IL++N VD GV +DS ARTALAFVTLRADGEREF+F+R+PSADMLL EL+
Sbjct: 67 GRMLAAILRDNGVDDGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNV 126
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
LIK+ ++FHYGSISLIAEPCR+ L AM +AKE+G++LSYDPNLR LWPS E AR I
Sbjct: 127 ELIKRAAVFHYGSISLIAEPCRTAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTQI 186
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+SIWDQADI+KVS+ E+ FLTG D DD V+ KL+ P +KLL+VT G +GC+YY ++F
Sbjct: 187 LSIWDQADIVKVSEVELEFLTGIDSVEDD--VVMKLWRPTMKLLLVTLGDQGCKYYARDF 244
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
G VP K + VDTTGAGD+FV +L + D + ++DE +L E++ FANACGA+T T++
Sbjct: 245 HGAVPSFKVQQVDTTGAGDAFVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKK 304
Query: 330 GAIPALPTKEAALKLLH 346
GAIP+LPT+ L+L+
Sbjct: 305 GAIPSLPTEAEVLQLIE 321
|
May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway. Zea mays (taxid: 4577) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/308 (66%), Positives = 250/308 (81%), Gaps = 2/308 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPT GVSLAEAP F KAPGGAPANVA+ +SRLGG SAFVGKLGDDEF
Sbjct: 9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEF 68
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA IL++N VD G+ +D+ ARTALAFVTLRADG+REF+F+R+PSADMLL EL+
Sbjct: 69 GHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPDELNL 128
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LI+ +FHYGSISLI EPCRS L AM +AKE+G++LSYDPNLR PLWPS+E A+ I
Sbjct: 129 DLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQI 188
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
MSIWD+A+IIKVSD E+ FLTG + +D+ + L+HPNLKLL+VT G KGCRYYTK F
Sbjct: 189 MSIWDKAEIIKVSDVELEFLTGSNKIDDETAL--TLWHPNLKLLLVTLGEKGCRYYTKTF 246
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KG V AVDTTGAGDSFV +LN + D+++++DE RLR+ L FANACGA+T T++
Sbjct: 247 KGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKK 306
Query: 330 GAIPALPT 337
GAIPALP+
Sbjct: 307 GAIPALPS 314
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/316 (64%), Positives = 252/316 (79%), Gaps = 2/316 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPTV GVSLA+AP F KAPGGAPANVA+ ISRLGG +AFVGKLGDDEF
Sbjct: 10 LIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGDDEF 69
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA ILK+N V G+ +D+ ARTALAFVTLR+DGEREF+F+R+PSADMLL EL+
Sbjct: 70 GHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 129
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
++I+ +FHYGSISLI EPCRS L AM +AKE+G++LSYDPNLRLPLWPS+E A++ I
Sbjct: 130 DVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQI 189
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+SIWD+A++IKVSD+E+ FLTG D +D+ + L+H NLKLL+VT G KGCRYYTK F
Sbjct: 190 LSIWDKAEVIKVSDEELMFLTGSDKVDDETAL--SLWHSNLKLLLVTLGEKGCRYYTKSF 247
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+G V AVDTTGAGDSFV +L + D+ +++DE RLRE L ANACGA+T T++
Sbjct: 248 RGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKK 307
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT+ LL
Sbjct: 308 GAIPALPTESEVQSLL 323
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/326 (63%), Positives = 252/326 (77%), Gaps = 2/326 (0%)
Query: 20 MDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSA 79
M +G LVV FGEMLIDFVPT GVSL+E+ F KAPGGAPANVA+ +SRLGG +A
Sbjct: 1 MTSSNGDNKGLVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAA 60
Query: 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSAD 139
FVGKLGDDEFG+MLA IL++N+VD G+ +D ARTALAFVTLR+DGEREF+F+R+PSAD
Sbjct: 61 FVGKLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSAD 120
Query: 140 MLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLW 199
MLL EL+ LI+ +FHYGSISLI EPCRS + AM +AKE+G++LSYDPNLR PLW
Sbjct: 121 MLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLW 180
Query: 200 PSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259
PS E AR+ IMSIWD+ADIIKVSD E+ FLTG +D+ + L+HPNLKLL+VT G
Sbjct: 181 PSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDDETAM--SLWHPNLKLLLVTLGE 238
Query: 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFAN 319
GCRYYTK+F G V AVDTTGAGDSFV +LN + DQ+++++E RLR+ L FAN
Sbjct: 239 NGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFAN 298
Query: 320 ACGALTVTERGAIPALPTKEAALKLL 345
ACGA+T T++GAIPALPT AL L
Sbjct: 299 ACGAITTTKKGAIPALPTDCEALSFL 324
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9LNE4|SCRK3_ARATH Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/316 (64%), Positives = 246/316 (77%), Gaps = 2/316 (0%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPTV GVSL+E+P F KAPGGAPANVA+ +SRLGG +AFVGKLGDD+F
Sbjct: 10 LIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDF 69
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA IL++N VD G+ +D ARTALAFVTLR+DGEREF+F+R+PSADMLL EL+
Sbjct: 70 GHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 129
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
LI+ +FHYGSISLI EPCRS + AM +AKE+G++LSYDPNLR PLWPS E AR I
Sbjct: 130 ELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQI 189
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
MSIWD+ADIIKVSD E+ FLT +D + L+HPNLKLL+VT G KGC Y+TK+F
Sbjct: 190 MSIWDKADIIKVSDVELEFLTENKTMDDKTAM--SLWHPNLKLLLVTLGEKGCTYFTKKF 247
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
G V AVDTTGAGDSFV +L + DQ++++DE RLR+ L FANACGA+T T++
Sbjct: 248 HGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKK 307
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT AL L
Sbjct: 308 GAIPALPTDIEALSFL 323
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| 45550051 | 350 | fructokinase [Citrus unshiu] | 0.997 | 1.0 | 0.985 | 0.0 | |
| 339896185 | 336 | fructokinase [Dimocarpus longan] | 0.948 | 0.991 | 0.838 | 1e-168 | |
| 224122496 | 351 | predicted protein [Populus trichocarpa] | 0.943 | 0.943 | 0.818 | 1e-157 | |
| 224134627 | 349 | predicted protein [Populus trichocarpa] | 0.985 | 0.991 | 0.787 | 1e-157 | |
| 356559893 | 345 | PREDICTED: putative fructokinase-5-like | 0.977 | 0.994 | 0.771 | 1e-153 | |
| 359489519 | 371 | PREDICTED: putative fructokinase-5-like | 0.900 | 0.851 | 0.822 | 1e-153 | |
| 147840622 | 371 | hypothetical protein VITISV_012349 [Viti | 0.900 | 0.851 | 0.819 | 1e-152 | |
| 356530913 | 346 | PREDICTED: putative fructokinase-5-like | 0.977 | 0.991 | 0.763 | 1e-152 | |
| 225455661 | 346 | PREDICTED: fructokinase-2 [Vitis vinifer | 0.971 | 0.985 | 0.772 | 1e-152 | |
| 356574458 | 341 | PREDICTED: putative fructokinase-5-like | 0.960 | 0.988 | 0.788 | 1e-151 |
| >gi|45550051|gb|AAS67872.1| fructokinase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/351 (98%), Positives = 347/351 (98%), Gaps = 1/351 (0%)
Query: 1 MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAP 60
MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKK
Sbjct: 1 MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKLL 60
Query: 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFV 120
APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFV
Sbjct: 61 C-APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFV 119
Query: 121 TLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180
TLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL
Sbjct: 120 TLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 179
Query: 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNV 240
AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD+V
Sbjct: 180 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDHV 239
Query: 241 VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300
VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA
Sbjct: 240 VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 299
Query: 301 DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL 351
DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
Sbjct: 300 DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL 350
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|339896185|gb|AEK21796.1| fructokinase [Dimocarpus longan] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/346 (83%), Positives = 314/346 (90%), Gaps = 13/346 (3%)
Query: 5 HNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAP 64
HNPTSG GS D + LVVCFGEMLIDFVPT+G VSLAEAPAFKKAPGGAP
Sbjct: 3 HNPTSG-GSND------------NSLVVCFGEMLIDFVPTIGEVSLAEAPAFKKAPGGAP 49
Query: 65 ANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRA 124
ANVAVGIS+LGG+SAF+GK+GDDEFGYML +ILK+NNV+TSGVRYDS ARTALAFVTLRA
Sbjct: 50 ANVAVGISKLGGTSAFIGKVGDDEFGYMLVDILKQNNVNTSGVRYDSNARTALAFVTLRA 109
Query: 125 DGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184
DGEREFLFFRHPSADMLL ESELD N+IKQ IFHYGSISLIAEPC+ST LAAM++AK S
Sbjct: 110 DGEREFLFFRHPSADMLLRESELDINIIKQARIFHYGSISLIAEPCKSTHLAAMSMAKRS 169
Query: 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEK 244
G ILSYDPNLRLPLWPSE+AAR+GIMSIWDQADIIK+S+DEITFLTGGDDHNDDNVVL K
Sbjct: 170 GGILSYDPNLRLPLWPSEQAARDGIMSIWDQADIIKISEDEITFLTGGDDHNDDNVVLNK 229
Query: 245 LFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304
L+HPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK+K+VDTTGAGD+FVSGILNCLA+D NL
Sbjct: 230 LYHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKSKSVDTTGAGDAFVSGILNCLASDLNL 289
Query: 305 IKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAA 350
KDE RLREALLFANACGA+TVTERGAIPALPTKEA LKL+ VAA
Sbjct: 290 FKDEERLREALLFANACGAITVTERGAIPALPTKEAVLKLVKLVAA 335
|
Source: Dimocarpus longan Species: Dimocarpus longan Genus: Dimocarpus Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122496|ref|XP_002318851.1| predicted protein [Populus trichocarpa] gi|222859524|gb|EEE97071.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/331 (81%), Positives = 301/331 (90%)
Query: 19 SMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 78
+++ GA D LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS
Sbjct: 14 ALNTKEGANDSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 73
Query: 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA 138
AF+GKLGDD+FGYML++ILK NNVD SGVR+DSTARTALAF+TLRADGEREFLFFRHPSA
Sbjct: 74 AFIGKLGDDDFGYMLSDILKRNNVDNSGVRFDSTARTALAFITLRADGEREFLFFRHPSA 133
Query: 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPL 198
DMLL ESELD NL++Q IFHYGSISLI+EPCRS+ +AAM +AK+SGSILSYDPNLRL L
Sbjct: 134 DMLLQESELDTNLLEQARIFHYGSISLISEPCRSSHIAAMRIAKKSGSILSYDPNLRLAL 193
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEG 258
WPS EAAREGIMSIW+QAD+IK+S++EITFLTG DDH DD VVL+KLFHPNLKLLIVTEG
Sbjct: 194 WPSAEAAREGIMSIWEQADVIKISEEEITFLTGCDDHTDDKVVLDKLFHPNLKLLIVTEG 253
Query: 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 318
S+GCRYYTKEFKGRVPGVK K VDTTGAGD+FV G+L+ LA + NL +DE LREALLFA
Sbjct: 254 SEGCRYYTKEFKGRVPGVKVKPVDTTGAGDAFVGGMLSNLAFNLNLFEDEKLLREALLFA 313
Query: 319 NACGALTVTERGAIPALPTKEAALKLLHTVA 349
NACGA+TVTERGAIPALPTKEA LKLL V+
Sbjct: 314 NACGAVTVTERGAIPALPTKEAVLKLLEKVS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134627|ref|XP_002321869.1| predicted protein [Populus trichocarpa] gi|222868865|gb|EEF05996.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/349 (78%), Positives = 308/349 (88%), Gaps = 3/349 (0%)
Query: 1 MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAP 60
MA++H P S D +++M GA D LVVCFGEMLIDFV TV GVSLAEAPAFKKAP
Sbjct: 1 MAEDHVPCKSRDSNDHASNM---KGANDSLVVCFGEMLIDFVSTVAGVSLAEAPAFKKAP 57
Query: 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFV 120
GGAPANVAVGISRL GSSAF+GKLGDDEFGYML++ILK+NNVD SGVR+DSTARTALAFV
Sbjct: 58 GGAPANVAVGISRLDGSSAFMGKLGDDEFGYMLSDILKQNNVDNSGVRFDSTARTALAFV 117
Query: 121 TLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180
TL+ DGEREFLFFRHPSADMLL ESELD NL++Q IFHYGSISLI+EPCRS+Q AAM +
Sbjct: 118 TLKDDGEREFLFFRHPSADMLLRESELDINLLEQARIFHYGSISLISEPCRSSQFAAMRI 177
Query: 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNV 240
AK+SGSILSYDPNLRL LWPS EAAREGIMSIWDQAD+IK+S++EITFLTG DD NDD V
Sbjct: 178 AKKSGSILSYDPNLRLALWPSAEAAREGIMSIWDQADVIKISEEEITFLTGCDDPNDDKV 237
Query: 241 VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300
V++KLFHPNLKLLIVTEGSKGCRYYTKEFKG VPGVK K VDTTGAGD+FV G+L+ LA+
Sbjct: 238 VMDKLFHPNLKLLIVTEGSKGCRYYTKEFKGWVPGVKVKPVDTTGAGDAFVGGMLSNLAS 297
Query: 301 DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 349
+ NL +DE LREALLFANACGA+TVTERGAIPALPTK+A LKLL T++
Sbjct: 298 NLNLFEDEKLLREALLFANACGAVTVTERGAIPALPTKDAVLKLLGTLS 346
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559893|ref|XP_003548230.1| PREDICTED: putative fructokinase-5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/346 (77%), Positives = 297/346 (85%), Gaps = 3/346 (0%)
Query: 6 NPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPA 65
+PTS S DL LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPA
Sbjct: 3 HPTSSGQSHDLKKE---DCKETRSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPA 59
Query: 66 NVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRAD 125
NVAVGISRLGGSSAF+GK+G DEFGYML NILK+NNV+TSG+R+DS ARTALAFVTLRAD
Sbjct: 60 NVAVGISRLGGSSAFIGKVGADEFGYMLGNILKQNNVETSGMRFDSNARTALAFVTLRAD 119
Query: 126 GEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185
GEREFLFFR+PSADMLL ESELDK+++KQ IFHYGSISLI EPC+S LAAM++AK SG
Sbjct: 120 GEREFLFFRNPSADMLLQESELDKDILKQARIFHYGSISLIDEPCKSAHLAAMSIAKNSG 179
Query: 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKL 245
ILSYDPNLRL LWPS ++AR+GIM IWDQAD+IK+S+DEITFLTGGDD DDNVVL+KL
Sbjct: 180 CILSYDPNLRLALWPSADSARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKL 239
Query: 246 FHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLI 305
FHPNLKLLIVTEGS+GCRYYTK FKGRV GVK K VDTTGAGD+FVSGIL C+A+DQ +
Sbjct: 240 FHPNLKLLIVTEGSQGCRYYTKAFKGRVAGVKVKPVDTTGAGDAFVSGILYCIASDQTIF 299
Query: 306 KDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL 351
+DE RLR+AL FAN CGALTVTERGAIPALPTKEA L+ L A +
Sbjct: 300 QDEKRLRKALYFANVCGALTVTERGAIPALPTKEAILQFLLEAAVI 345
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489519|ref|XP_002272526.2| PREDICTED: putative fructokinase-5-like [Vitis vinifera] gi|296089121|emb|CBI38824.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/316 (82%), Positives = 293/316 (92%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
LVVCFGEMLIDFVPTVGGVSL+E+PAFKKAPGGAPANVAVGISRLGGSSAF+GK+G+DEF
Sbjct: 51 LVVCFGEMLIDFVPTVGGVSLSESPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGEDEF 110
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA+ILK+NNVD+SG+R+D ARTALAFVTLR DGEREF+FFR+PSADMLL ESELD
Sbjct: 111 GFMLADILKQNNVDSSGMRFDRNARTALAFVTLRDDGEREFMFFRNPSADMLLRESELDA 170
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
NLIK+ SIFHYGSISLI EPC+S LAAMN+A++SGSILSYDPNLRLPLWPS E AR+ I
Sbjct: 171 NLIKKASIFHYGSISLIEEPCKSAHLAAMNIARKSGSILSYDPNLRLPLWPSPETARKTI 230
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
MSIW+QAD+IK+S++EITFLTGGDD NDDNVVL+KL+H NLKLL+VTEGS GCRYYTKEF
Sbjct: 231 MSIWNQADLIKISEEEITFLTGGDDPNDDNVVLKKLYHSNLKLLVVTEGSNGCRYYTKEF 290
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KGRV GVK KAVDTTGAGD+FV GILN LAAD NL K+E +LREALLFANACGA+TVTER
Sbjct: 291 KGRVTGVKVKAVDTTGAGDAFVGGILNSLAADLNLYKNEEKLREALLFANACGAITVTER 350
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPTKEA L++L
Sbjct: 351 GAIPALPTKEAVLQIL 366
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147840622|emb|CAN61782.1| hypothetical protein VITISV_012349 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/316 (81%), Positives = 292/316 (92%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
LVVCFGEMLIDFVPTVGGVSL+E+PAFKKAPGGAPANVAVGISRLGGSSAF+GK+G+DEF
Sbjct: 51 LVVCFGEMLIDFVPTVGGVSLSESPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGEDEF 110
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA+ILK+NNVD+SG+R+D ARTALAFVTLR DGEREF+FFR+PSADMLL ESELD
Sbjct: 111 GFMLADILKQNNVDSSGMRFDRNARTALAFVTLRDDGEREFMFFRNPSADMLLRESELDA 170
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
NLIK+ SIFHYGSISLI EPC+S LAAMN+A++SGSILSYDPNLRLPLWPS E AR+ I
Sbjct: 171 NLIKKASIFHYGSISLIEEPCKSAHLAAMNIARKSGSILSYDPNLRLPLWPSPETARKTI 230
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
MSIW+QAD+IK+S++EITFLTGGDD NDD VVL+KL+H NLKLL+VTEGS GCRYYTKEF
Sbjct: 231 MSIWNQADLIKISEEEITFLTGGDDPNDDYVVLKKLYHSNLKLLVVTEGSNGCRYYTKEF 290
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KGRV GVK KAVDTTGAGD+FV GILN LAAD NL K+E +LREALLFANACGA+TVTER
Sbjct: 291 KGRVTGVKVKAVDTTGAGDAFVGGILNSLAADLNLYKNEEKLREALLFANACGAITVTER 350
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPTKEA L++L
Sbjct: 351 GAIPALPTKEAVLQIL 366
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530913|ref|XP_003534023.1| PREDICTED: putative fructokinase-5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/347 (76%), Positives = 300/347 (86%), Gaps = 4/347 (1%)
Query: 6 NPTSGAG-SKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAP 64
+PTS +G S DL+ +VVCFGEMLIDFVP VGGVSLAEAPAFKKAPGGAP
Sbjct: 3 HPTSSSGQSNDLTKE---DCKETSSVVVCFGEMLIDFVPMVGGVSLAEAPAFKKAPGGAP 59
Query: 65 ANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRA 124
ANVAVGISRLG SSAF+GK+G DEFGYMLA+ILK+NNV+TSG+R+DS ARTALAFVTLRA
Sbjct: 60 ANVAVGISRLGSSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRA 119
Query: 125 DGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184
DGEREFLFFR+PSADMLL ESELDK+L+K+ IFHYGSISLI EPC+S LAAM++AK S
Sbjct: 120 DGEREFLFFRNPSADMLLQESELDKDLLKKARIFHYGSISLIDEPCKSAHLAAMSIAKNS 179
Query: 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEK 244
G ILSYDPNLRL LWPS +AAR+GIM IWDQAD+IK+S+DEITFLTGGDD DDNVVL+K
Sbjct: 180 GCILSYDPNLRLALWPSADAARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKK 239
Query: 245 LFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304
LFHPNLKLLIVTEGS+GCRYYTK FKGRV GVK K VDTTGAGD+FVSGIL+C+A+DQ +
Sbjct: 240 LFHPNLKLLIVTEGSQGCRYYTKAFKGRVSGVKVKPVDTTGAGDAFVSGILHCIASDQTI 299
Query: 305 IKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL 351
+DE RLR+AL FAN CGALTVT+RGAIPALPTKEA L+ L A +
Sbjct: 300 FQDEKRLRKALYFANVCGALTVTQRGAIPALPTKEAILQFLLEAAVI 346
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455661|ref|XP_002263176.1| PREDICTED: fructokinase-2 [Vitis vinifera] gi|296084079|emb|CBI24467.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/343 (77%), Positives = 303/343 (88%), Gaps = 2/343 (0%)
Query: 6 NPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPA 65
NPTSG +DL + GG+ LVVCFGEMLIDFVPTVGGVSLAEAPAFKKA GGAPA
Sbjct: 4 NPTSG-NYEDLPLNT-GGADNKSSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAAGGAPA 61
Query: 66 NVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRAD 125
NVAVGIS+LGGSSAF+GK+GDDEFG+MLA+ILK+NNV+ SG+R+D +ARTALAFV+LRAD
Sbjct: 62 NVAVGISKLGGSSAFIGKVGDDEFGHMLADILKKNNVNNSGMRFDHSARTALAFVSLRAD 121
Query: 126 GEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185
GEREFLFFR+PSADML ESELD L++Q IFHYGSISLI EPCRST LAAM +AK++G
Sbjct: 122 GEREFLFFRNPSADMLFHESELDLKLLEQAKIFHYGSISLIEEPCRSTHLAAMTIAKKAG 181
Query: 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKL 245
SILSYDPNLRL LWPS EAAR+GIMS+WD+ADIIKVS+DEITFLTGGDD DDNVVL+KL
Sbjct: 182 SILSYDPNLRLKLWPSAEAARKGIMSVWDKADIIKVSEDEITFLTGGDDPCDDNVVLKKL 241
Query: 246 FHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLI 305
FHPNLKLL+VTEGS+GCRYYTK+F+GRV G+K KAVDTTGAGD+FVSGIL+ +A+D NL
Sbjct: 242 FHPNLKLLVVTEGSEGCRYYTKKFRGRVAGIKVKAVDTTGAGDAFVSGILSNIASDINLY 301
Query: 306 KDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTV 348
+DE RLREAL+FAN CGALTV ERGAIPALP KEA LK+L +
Sbjct: 302 QDEKRLREALVFANVCGALTVRERGAIPALPNKEAVLKMLQNI 344
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574458|ref|XP_003555364.1| PREDICTED: putative fructokinase-5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/340 (78%), Positives = 296/340 (87%), Gaps = 3/340 (0%)
Query: 8 TSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANV 67
TS S DL+ G A LVVCFGE+LIDFVPTVGGVSLAEAPAFKKAPGGAPANV
Sbjct: 5 TSSGKSDDLTKEDCKGQSA---LVVCFGEILIDFVPTVGGVSLAEAPAFKKAPGGAPANV 61
Query: 68 AVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGE 127
AVGISRLGGSSAFVGK+G DEFGYMLA+ILK+N+V+TSG+++D ARTALAFVTLRADGE
Sbjct: 62 AVGISRLGGSSAFVGKVGADEFGYMLADILKQNDVETSGMKFDPNARTALAFVTLRADGE 121
Query: 128 REFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI 187
REFLFFR+PSADMLL ESELDKNLIK+ IFHYGSISLI EPC+S LAAM AKESG I
Sbjct: 122 REFLFFRNPSADMLLQESELDKNLIKKAKIFHYGSISLIDEPCKSAHLAAMRFAKESGCI 181
Query: 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFH 247
LSYDPNLRL LWPS EAAR+GIMSIWDQAD+IK+S+DEITFLTGGDD DDNVVL+KLFH
Sbjct: 182 LSYDPNLRLALWPSAEAARDGIMSIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFH 241
Query: 248 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKD 307
PNLKLLIVTEGS+GCRYYTKEFKGRV GVK K VDTTGAGD+FVSGI+ LA+DQ+L ++
Sbjct: 242 PNLKLLIVTEGSEGCRYYTKEFKGRVAGVKVKPVDTTGAGDAFVSGIIYSLASDQSLFQN 301
Query: 308 ENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 347
E LR+AL FAN CGA+TVTERGAIPALPTKEA L+ T
Sbjct: 302 EEHLRKALHFANVCGAITVTERGAIPALPTKEAVLQFAAT 341
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| TAIR|locus:2165361 | 343 | AT5G51830 [Arabidopsis thalian | 0.905 | 0.927 | 0.738 | 8e-124 | |
| TAIR|locus:2028987 | 384 | AT1G66430 [Arabidopsis thalian | 0.954 | 0.872 | 0.646 | 1e-109 | |
| TAIR|locus:2122789 | 324 | AT4G10260 [Arabidopsis thalian | 0.894 | 0.969 | 0.645 | 1.2e-104 | |
| TAIR|locus:2198831 | 329 | AT1G06030 [Arabidopsis thalian | 0.923 | 0.984 | 0.598 | 3.9e-99 | |
| TAIR|locus:2061320 | 325 | AT2G31390 [Arabidopsis thalian | 0.871 | 0.941 | 0.616 | 2.8e-98 | |
| TAIR|locus:2097553 | 326 | AT3G59480 [Arabidopsis thalian | 0.894 | 0.963 | 0.601 | 4.5e-98 | |
| TAIR|locus:2198821 | 345 | AT1G06020 [Arabidopsis thalian | 0.917 | 0.933 | 0.591 | 1.8e-96 | |
| UNIPROTKB|Q481A7 | 336 | CPS_2648 "Carbohydrate kinase, | 0.877 | 0.916 | 0.360 | 6.4e-44 | |
| TIGR_CMR|CPS_2648 | 336 | CPS_2648 "carbohydrate kinase, | 0.877 | 0.916 | 0.360 | 6.4e-44 | |
| TAIR|locus:2011897 | 146 | AT1G50390 [Arabidopsis thalian | 0.273 | 0.657 | 0.593 | 1.2e-41 |
| TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
Identities = 235/318 (73%), Positives = 267/318 (83%)
Query: 28 DRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDD 87
+ LVVCFGEMLIDFVPTVGGVSL +SRLGGSSAF+GK+GDD
Sbjct: 21 ETLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGVSRLGGSSAFIGKVGDD 80
Query: 88 EFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESEL 147
EFG MLA+IL+ NNVD SG+R+D ARTALAFVTLR DGEREFLFFRHPSADMLL ESEL
Sbjct: 81 EFGRMLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFLFFRHPSADMLLLESEL 140
Query: 148 DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
DKNLI++ IFHYGSISLI EPCRSTQL AM +AK +GS+LSYDPNLRLPLWPSEEAAR+
Sbjct: 141 DKNLIQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYDPNLRLPLWPSEEAARK 200
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267
IMSIW+ AD+IK+S+DEITFLTGGDD DD+VVL+KLFHPNLKLL+V+EG GCRYYT+
Sbjct: 201 EIMSIWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLKLLVVSEGPNGCRYYTQ 260
Query: 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327
EFKGRV GVK K VDTTGAGD+FVSG+LN LA+D L+KDE +LREALLFANACGA+TVT
Sbjct: 261 EFKGRVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACGAITVT 320
Query: 328 ERGAIPALPTKEAALKLL 345
ERGAIPA+P+ +A LL
Sbjct: 321 ERGAIPAMPSMDAVQDLL 338
|
|
| TAIR|locus:2028987 AT1G66430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 218/337 (64%), Positives = 258/337 (76%)
Query: 9 SGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXX 68
S + K + S DG S VVCFGEMLIDFVPT G+SL
Sbjct: 45 SRSNLKGRALSSDG-STQESPYVVCFGEMLIDFVPTTSGLSLADAPAFKKAPGGAPANVA 103
Query: 69 XXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGER 128
I+RLGGSSAF+GK+G+DEFGYMLANILK+NNV+ G+R+D ARTALAFVTL +GER
Sbjct: 104 VGIARLGGSSAFIGKVGEDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGER 163
Query: 129 EFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188
EF+F+R+PSADMLL ESELD +LIK+ IFHYGSISLI EPC+S ++A AKE+G IL
Sbjct: 164 EFMFYRNPSADMLLEESELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVIL 223
Query: 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHP 248
SYDPNLRLPLWPS + ARE I+SIW+ ADIIK+S++EI FLT G+D DDNVV KLFHP
Sbjct: 224 SYDPNLRLPLWPSADNAREEILSIWETADIIKISEEEIVFLTKGEDPYDDNVV-RKLFHP 282
Query: 249 NLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308
LKLL+VTEG +GCRYYTK+F GRV G+K VDTTGAGD+FV+GIL+ LA D +L++DE
Sbjct: 283 KLKLLLVTEGPEGCRYYTKDFSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDE 342
Query: 309 NRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
RLREAL+FANACGALTV RGAIPALPTKEA + L
Sbjct: 343 ERLREALMFANACGALTVKVRGAIPALPTKEAVHEAL 379
|
|
| TAIR|locus:2122789 AT4G10260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 204/316 (64%), Positives = 242/316 (76%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVP GVSL I++LGG SAF+GK GDDEF
Sbjct: 6 LIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGDDEF 65
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+ML NILK+N V++ GV +D+ ARTALAFVTL+ DGEREF+F+R+PSADMLL ESEL+K
Sbjct: 66 GHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESELNK 125
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LIK+ IFHYGSISLI+EPCR+ +AAM AK++G +LSYDPN+RLPLWPS EAA EGI
Sbjct: 126 DLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGI 185
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
SIW++ADIIKVSDDE+TFLT GD DD VVL L H LKLLIVT+G KGCRYYTK+F
Sbjct: 186 KSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLS-LMHDKLKLLIVTDGEKGCRYYTKKF 243
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KGRVPG KAVDTTGAGDSFV L L D +++ DE +L+EAL FANACGA+ T++
Sbjct: 244 KGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQK 303
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT A KL+
Sbjct: 304 GAIPALPTPADAQKLM 319
|
|
| TAIR|locus:2198831 AT1G06030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 195/326 (59%), Positives = 236/326 (72%)
Query: 20 MDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSA 79
M +G LVV FGEMLIDFVPT GVSL +SRLGG +A
Sbjct: 1 MTSSNGDNKGLVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAA 60
Query: 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSAD 139
FVGKLGDDEFG+MLA IL++N+VD G+ +D ARTALAFVTLR+DGEREF+F+R+PSAD
Sbjct: 61 FVGKLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSAD 120
Query: 140 MLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLW 199
MLL EL+ LI+ +FHYGSISLI EPCRS + AM +AKE+G++LSYDPNLR PLW
Sbjct: 121 MLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLW 180
Query: 200 PSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259
PS E AR+ IMSIWD+ADIIKVSD E+ FLTG +D+ + L+HPNLKLL+VT G
Sbjct: 181 PSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDDETAM--SLWHPNLKLLLVTLGE 238
Query: 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFAN 319
GCRYYTK+F G V AVDTTGAGDSFV +LN + DQ+++++E RLR+ L FAN
Sbjct: 239 NGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFAN 298
Query: 320 ACGALTVTERGAIPALPTKEAALKLL 345
ACGA+T T++GAIPALPT AL L
Sbjct: 299 ACGAITTTKKGAIPALPTDCEALSFL 324
|
|
| TAIR|locus:2061320 AT2G31390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 190/308 (61%), Positives = 233/308 (75%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPT GVSL +SRLGG SAFVGKLGDDEF
Sbjct: 9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEF 68
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA IL++N VD G+ +D+ ARTALAFVTLRADG+REF+F+R+PSADMLL EL+
Sbjct: 69 GHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPDELNL 128
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+LI+ +FHYGSISLI EPCRS L AM +AKE+G++LSYDPNLR PLWPS+E A+ I
Sbjct: 129 DLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQI 188
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
MSIWD+A+IIKVSD E+ FLTG + +D+ + L+HPNLKLL+VT G KGCRYYTK F
Sbjct: 189 MSIWDKAEIIKVSDVELEFLTGSNKIDDETALT--LWHPNLKLLLVTLGEKGCRYYTKTF 246
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
KG V AVDTTGAGDSFV +LN + D+++++DE RLR+ L FANACGA+T T++
Sbjct: 247 KGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKK 306
Query: 330 GAIPALPT 337
GAIPALP+
Sbjct: 307 GAIPALPS 314
|
|
| TAIR|locus:2097553 AT3G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 190/316 (60%), Positives = 235/316 (74%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEF 89
L+V FGEMLIDFVPTV GVSL ISRLGG +AFVGKLGDDEF
Sbjct: 10 LIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGDDEF 69
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G+MLA ILK+N V G+ +D+ ARTALAFVTLR+DGEREF+F+R+PSADMLL EL+
Sbjct: 70 GHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 129
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
++I+ +FHYGSISLI EPCRS L AM +AKE+G++LSYDPNLRLPLWPS+E A++ I
Sbjct: 130 DVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQI 189
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+SIWD+A++IKVSD+E+ FLTG D +D+ + L+H NLKLL+VT G KGCRYYTK F
Sbjct: 190 LSIWDKAEVIKVSDEELMFLTGSDKVDDETAL--SLWHSNLKLLLVTLGEKGCRYYTKSF 247
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+G V AVDTTGAGDSFV +L + D+ +++DE RLRE L ANACGA+T T++
Sbjct: 248 RGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKK 307
Query: 330 GAIPALPTKEAALKLL 345
GAIPALPT+ LL
Sbjct: 308 GAIPALPTESEVQSLL 323
|
|
| TAIR|locus:2198821 AT1G06020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 194/328 (59%), Positives = 233/328 (71%)
Query: 18 ASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGS 77
AS G G L+V FGEMLIDFVPTV GVSL +SRLGG
Sbjct: 2 ASSTGEKG----LIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGR 57
Query: 78 SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPS 137
+AFVGKLGDD+FG+MLA IL++N VD G+ +D ARTALAFVTLR+DGEREF+F+R+PS
Sbjct: 58 AAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPS 117
Query: 138 ADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP 197
ADMLL EL+ LI+ +FHYGSISLI EPCRS + AM +AKE+G++LSYDPNLR P
Sbjct: 118 ADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREP 177
Query: 198 LWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTE 257
LWPS E AR IMSIWD+ADIIKVSD E+ FLT +D + L+HPNLKLL+VT
Sbjct: 178 LWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAM--SLWHPNLKLLLVTL 235
Query: 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317
G KGC Y+TK+F G V AVDTTGAGDSFV +L + DQ++++DE RLR+ L F
Sbjct: 236 GEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRF 295
Query: 318 ANACGALTVTERGAIPALPTKEAALKLL 345
ANACGA+T T++GAIPALPT AL L
Sbjct: 296 ANACGAITTTKKGAIPALPTDIEALSFL 323
|
|
| UNIPROTKB|Q481A7 CPS_2648 "Carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 114/316 (36%), Positives = 167/316 (52%)
Query: 31 VVCFGEMLIDFVPTVGGVS-LXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEF 89
V+CFGE LIDF+ T +SRLGG + F G++GDD F
Sbjct: 4 VICFGEALIDFLNTGSQEDGCLTLNNYRQYPGGAPANAAVAVSRLGGKAFFAGQVGDDAF 63
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G L N L VDT V A+TALAFV L GER F F RH +AD+L +S++D+
Sbjct: 64 GDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLFEKSQVDE 123
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+ IFH+ S +L + A+ A G+I+S+D NLR LW + + + +
Sbjct: 124 IWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATGKVSISVV 183
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ QA ++K S +E+T+L G N ++ + + F N +LLI+T+G YYT
Sbjct: 184 NKLVKQAHVLKFSSEELTYLAQG---NIESYI-QSCFDANCQLLIITDGENVLTYYTAAI 239
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK--DENRLREALL-FANACGALTV 326
+ K VDTT GD+F+ +L L+ + L + D+N L + ++ F+ +CGALTV
Sbjct: 240 LDAISPPKVITVDTTAGGDAFIGALLFALSHFEQLTELLDDNELLKQIINFSASCGALTV 299
Query: 327 TERGAIPALPTKEAAL 342
T+ GA PALP E A+
Sbjct: 300 TKAGAFPALPNFEQAV 315
|
|
| TIGR_CMR|CPS_2648 CPS_2648 "carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 114/316 (36%), Positives = 167/316 (52%)
Query: 31 VVCFGEMLIDFVPTVGGVS-LXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEF 89
V+CFGE LIDF+ T +SRLGG + F G++GDD F
Sbjct: 4 VICFGEALIDFLNTGSQEDGCLTLNNYRQYPGGAPANAAVAVSRLGGKAFFAGQVGDDAF 63
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G L N L VDT V A+TALAFV L GER F F RH +AD+L +S++D+
Sbjct: 64 GDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLFEKSQVDE 123
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+ IFH+ S +L + A+ A G+I+S+D NLR LW + + + +
Sbjct: 124 IWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATGKVSISVV 183
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ QA ++K S +E+T+L G N ++ + + F N +LLI+T+G YYT
Sbjct: 184 NKLVKQAHVLKFSSEELTYLAQG---NIESYI-QSCFDANCQLLIITDGENVLTYYTAAI 239
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK--DENRLREALL-FANACGALTV 326
+ K VDTT GD+F+ +L L+ + L + D+N L + ++ F+ +CGALTV
Sbjct: 240 LDAISPPKVITVDTTAGGDAFIGALLFALSHFEQLTELLDDNELLKQIINFSASCGALTV 299
Query: 327 TERGAIPALPTKEAAL 342
T+ GA PALP E A+
Sbjct: 300 TKAGAFPALPNFEQAV 315
|
|
| TAIR|locus:2011897 AT1G50390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 57/96 (59%), Positives = 71/96 (73%)
Query: 250 LKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDEN 309
+KLL+VT G KGCRYYTK+F G V AVDTTGAGDSFV +LN + DQ+++++E
Sbjct: 45 IKLLLVTLGEKGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEE 104
Query: 310 RLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
RLR+ L ANACGA+T T++GAIPALPT AL L
Sbjct: 105 RLRKVLRIANACGAITTTKKGAIPALPTDCEALSFL 140
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6XZ78 | SCRK2_MAIZE | 2, ., 7, ., 1, ., 4 | 0.6415 | 0.9002 | 0.9432 | N/A | no |
| Q6XZ79 | SCRK1_MAIZE | 2, ., 7, ., 1, ., 4 | 0.6498 | 0.8974 | 0.9752 | N/A | no |
| P40713 | SCRK_ECOLX | 2, ., 7, ., 1, ., 4 | 0.3656 | 0.8461 | 0.9674 | yes | no |
| P37829 | SCRK_SOLTU | 2, ., 7, ., 1, ., 4 | 0.6346 | 0.8860 | 0.9749 | N/A | no |
| A2WXV8 | SCRK1_ORYSI | 2, ., 7, ., 1, ., 4 | 0.6446 | 0.9002 | 0.9783 | N/A | no |
| O59128 | Y1459_PYRHO | 2, ., 7, ., 1, ., - | 0.3238 | 0.8262 | 0.9354 | yes | no |
| A2YQL4 | SCRK2_ORYSI | 2, ., 7, ., 1, ., 4 | 0.6406 | 0.9059 | 0.9464 | N/A | no |
| Q42896 | SCRK2_SOLLC | 2, ., 7, ., 1, ., 4 | 0.6550 | 0.8945 | 0.9573 | N/A | no |
| P26420 | SCRK_KLEPN | 2, ., 7, ., 1, ., 4 | 0.3915 | 0.8461 | 0.9674 | yes | no |
| Q7XJ81 | SCRK2_SOLHA | 2, ., 7, ., 1, ., 4 | 0.6550 | 0.8945 | 0.9573 | N/A | no |
| O34768 | YDJE_BACSU | 2, ., 7, ., 1, ., - | 0.3936 | 0.8518 | 0.9343 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 0.0 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 1e-127 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 7e-89 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 6e-85 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 1e-76 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 2e-76 | |
| PLN02543 | 496 | PLN02543, PLN02543, pfkB-type carbohydrate kinase | 8e-61 | |
| PLN02967 | 581 | PLN02967, PLN02967, kinase | 1e-53 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 1e-49 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 2e-45 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 1e-38 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 5e-30 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 1e-28 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 6e-25 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 4e-23 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 5e-23 | |
| cd01172 | 304 | cd01172, RfaE_like, RfaE encodes a bifunctional AD | 5e-22 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 2e-21 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 6e-19 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 2e-16 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 7e-16 | |
| PLN02341 | 470 | PLN02341, PLN02341, pfkB-type carbohydrate kinase | 9e-16 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 6e-15 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 6e-15 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 1e-13 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 1e-12 | |
| TIGR02198 | 315 | TIGR02198, rfaE_dom_I, rfaE bifunctional protein, | 4e-12 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 7e-11 | |
| COG2870 | 467 | COG2870, RfaE, ADP-heptose synthase, bifunctional | 1e-10 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 1e-10 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 2e-08 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 2e-08 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 1e-06 | |
| PRK11316 | 473 | PRK11316, PRK11316, bifunctional heptose 7-phospha | 3e-06 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 3e-05 | |
| cd01946 | 277 | cd01946, ribokinase_group_C, Ribokinase-like subgr | 3e-05 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 654 bits (1689), Expect = 0.0
Identities = 256/332 (77%), Positives = 289/332 (87%), Gaps = 2/332 (0%)
Query: 19 SMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 78
SM S A LVVCFGEMLIDFVPTV GVSLAEAPAFKKAPGGAPANVAVGISRLGGSS
Sbjct: 1 SMTAPSTAESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 60
Query: 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA 138
AF+GK+GDDEFG+MLA+ILK+N V+ GVR+D ARTALAFVTLR+DGEREF+F+R+PSA
Sbjct: 61 AFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSA 120
Query: 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPL 198
DMLL ESELD +LI++ IFHYGSISLI EPCRS LAAM +AKE+G++LSYDPNLRLPL
Sbjct: 121 DMLLRESELDLDLIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPL 180
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEG 258
WPS EAAREGIMSIWD+ADIIKVSD+E+ FLTGGDD +DD VV KL+HPNLKLL+VTEG
Sbjct: 181 WPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV--KLWHPNLKLLLVTEG 238
Query: 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 318
+GCRYYTK+FKGRV G K KAVDTTGAGD+FV G+L+ LA D +L++DE RLREAL FA
Sbjct: 239 EEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFA 298
Query: 319 NACGALTVTERGAIPALPTKEAALKLLHTVAA 350
NACGA+T TERGAIPALPTKEA LKLL A
Sbjct: 299 NACGAITTTERGAIPALPTKEAVLKLLKKAVA 330
|
Length = 330 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-127
Identities = 158/303 (52%), Positives = 204/303 (67%), Gaps = 8/303 (2%)
Query: 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
VVCFGE LIDF+P G F KAPGGAPANVAV ++RLGG +AF+GK+GDDEF
Sbjct: 1 KVVCFGEALIDFIPEGSGAP----ETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEF 56
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G L LKE VDT G+++D A T LAFVTL ADGER F F+R P+AD+LL ++EL+
Sbjct: 57 GDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLL-DTELNP 115
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+L+ + I H+GSI+L +EP RS L + AK++G ++S+DPNLR PLW EE ARE I
Sbjct: 116 DLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERI 175
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ + ADI+K+SD+E+ L G +D + L LKL++VT G+ G YTK
Sbjct: 176 AELLELADIVKLSDEELELLFGEEDP---EEIAALLLLFGLKLVLVTRGADGALLYTKGG 232
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
G VPG+ + VDTTGAGD+FV+G+L L + L DE+ L EAL FANA GALT T+
Sbjct: 233 VGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKA 292
Query: 330 GAI 332
GAI
Sbjct: 293 GAI 295
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 268 bits (688), Expect = 7e-89
Identities = 121/281 (43%), Positives = 161/281 (57%), Gaps = 5/281 (1%)
Query: 58 KAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTAL 117
K PGGAPANVAVGI+RLGG S F+G++GDD FG + L++ VDT+ +R D RT+
Sbjct: 25 KCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTST 84
Query: 118 AFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAA 177
V L GER F F PSAD+ L +L +QG H SI+L AEP RST A
Sbjct: 85 VVVDLDDQGERSFTFMVRPSADLFLQPQDLPP--FRQGEWLHLCSIALSAEPSRSTTFEA 142
Query: 178 MNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHND 237
M K +G +S+DPNLR LW E RE + AD++K+S++E+ FL+G D
Sbjct: 143 MRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQLED 202
Query: 238 DNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 297
L + + LL+VT G++G +T+ P VDTTGAGD+FV+G+L
Sbjct: 203 AIYALADRY--PIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAG 260
Query: 298 LAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338
L+ L DE L E + A ACGAL T +GA+ ALP +
Sbjct: 261 LSQ-AGLWTDEAELAEIIAQAQACGALATTAKGAMTALPNR 300
|
Length = 304 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 6e-85
Identities = 116/303 (38%), Positives = 156/303 (51%), Gaps = 11/303 (3%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
VV GE+++D P GG L +A +F+K GGA ANVAVG++RLG A V +GDD FG
Sbjct: 2 VVTIGEVMVDLSPPGGGR-LEQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFG 60
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
+ L+ VDTS VR D T L F+ + A GER L++R SA L +LD+
Sbjct: 61 RFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEA 120
Query: 151 LIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+ H I+L ++E R L A+ AK G +S+D N R LW S E ARE +
Sbjct: 121 ALAGADHLHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLW-SAEEAREAL 179
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ DI+ S++E L G +D D +K ++V G++G YT
Sbjct: 180 EELLPYVDIVLPSEEEAEALLGDEDPTDAAERA-LALALGVKAVVVKLGAEGALVYTGGG 238
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+ VP + VDTTGAGD+F +G L L + L EAL FANA AL VT
Sbjct: 239 RVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRP 291
Query: 330 GAI 332
G I
Sbjct: 292 GDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 1e-76
Identities = 118/314 (37%), Positives = 164/314 (52%), Gaps = 23/314 (7%)
Query: 30 LVVCFGEMLIDFVPTVGG--VSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDD 87
+V GE ID + V G L +K GGA ANVAV ++RLGG F+GK+GDD
Sbjct: 3 KIVVIGEANIDLIGRVEGLEGELNRVKTVEKGAGGAGANVAVALARLGGEVTFIGKVGDD 62
Query: 88 EFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESEL 147
FG L +LK+ VDT V D RT LA + + DGER F+R +AD+ EL
Sbjct: 63 NFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGERTINFYRGAAADLTPE--EL 120
Query: 148 DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
++L++ I + + P L + A ++G +DPNLR PLW E E
Sbjct: 121 PEDLLENADILYLSGS--LPLPLPEATLEELIEAAKNGGT--FDPNLRDPLWADLEVLLE 176
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYY 265
+ ADI+K +++E+ LTG ++ + + L K +K ++VT G+ G
Sbjct: 177 ----LLPLADILKPNEEELEALTGEKINDIEEALAALHKHAK-GVKTVVVTLGADGALLV 231
Query: 266 TKEFKGRVPGV-KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGAL 324
+ + VP V K K VDTTGAGD+FV+G L L A ++ L EAL FANA AL
Sbjct: 232 DGDGEVHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKS-------LEEALRFANAVAAL 284
Query: 325 TVTERGAIPALPTK 338
V + GAI +LPT
Sbjct: 285 VVQKTGAISSLPTL 298
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 2e-76
Identities = 118/323 (36%), Positives = 163/323 (50%), Gaps = 25/323 (7%)
Query: 31 VVCFGEMLIDFVPTV-----GGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLG 85
VV GE +D + V FK A GG ANVAV ++RLG A +G +G
Sbjct: 2 VVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGAVG 61
Query: 86 DDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES 145
DD+FG L L++ VDTS V D A T LA + + DGER F+F+R A +LL
Sbjct: 62 DDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPE 120
Query: 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAA 205
+LD++ + + H I L P LAA+ LAK +G +S+D N R LW E
Sbjct: 121 DLDEDELAGADVLHISGIQLEIPP--EALLAALELAKAAGVTVSFDLNPRPALWDREL-- 176
Query: 206 REGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265
+ + ADI+ +++E LTG ++ + L +K ++VT G++G +
Sbjct: 177 ---LEELLALADILFPNEEEAELLTGLEEDAEAA--AALLLAKGVKTVVVTLGAEGAVVF 231
Query: 266 TKEFKGRVP---GVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 322
T + VP K K VDTTGAGD+F +G L L ++ L EAL FANA
Sbjct: 232 TGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAA 284
Query: 323 ALTVTERGAIPALPTKEAALKLL 345
AL VT GA P+LPT+E L
Sbjct: 285 ALAVTRPGARPSLPTREEVEAFL 307
|
Length = 311 |
| >gnl|CDD|215299 PLN02543, PLN02543, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 8e-61
Identities = 126/377 (33%), Positives = 188/377 (49%), Gaps = 51/377 (13%)
Query: 21 DGGSGAYDR--LVVCFGEMLIDFVPTVGGVS---------------LAEAPAFKKAPGGA 63
DG YD LV CFG + +FVPTV V + P F +APGG
Sbjct: 116 DGIDFPYDDPPLVCCFGAVQKEFVPTVR-VHDNQMHPDMYSQWKMLQWDPPEFARAPGGP 174
Query: 64 PANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAF--VT 121
P+NVA+ RLGG +AF+GK+GDD+FG L ++ + V T V++D A+TA + +
Sbjct: 175 PSNVAISHVRLGGRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIK 234
Query: 122 LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181
R G+ + + D LL SEL+ ++K+ +FH+ S L + +ST A+ L+
Sbjct: 235 FRDGGKMVAETVKEAAEDSLL-ASELNLAVLKEARMFHFNSEVLTSPSMQSTLFRAIELS 293
Query: 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD-------- 233
K+ G ++ +D NL LPLW S + RE I W++ADII+VS E+ FL D
Sbjct: 294 KKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYYERKRNY 353
Query: 234 --DHNDDNVVLEK---------------LFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV 276
+ ++ K L+H LKLL+VT+G+ YYT +F G V G
Sbjct: 354 PPQYYAESFEQTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGT 413
Query: 277 KTKAV-----DTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331
+ + D TG+GD+ V+ I+ L + +D++ L L FA A G ++ GA
Sbjct: 414 EDVLITPFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGA 473
Query: 332 IPALPTKEAALKLLHTV 348
+ PT+ A L V
Sbjct: 474 VRGFPTESATQNLKEQV 490
|
Length = 496 |
| >gnl|CDD|215521 PLN02967, PLN02967, kinase | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 1e-53
Identities = 109/343 (31%), Positives = 170/343 (49%), Gaps = 34/343 (9%)
Query: 30 LVVCFGEMLIDFVPT--------------VGGVSLAEAPAFKKAPGGAPANVAVGISRLG 75
LV CFG FVP+ + F +APGG+ VA+ ++ LG
Sbjct: 198 LVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASLG 257
Query: 76 GSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRH 135
G AF+GKLGDD++G + L N V T V D TA++ + + G + +
Sbjct: 258 GKVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVK- 316
Query: 136 PSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLR 195
P A+ L +SE++ +++K+ +F++ + SL+ RST L A+ ++K+ G ++ YD NL
Sbjct: 317 PCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLP 376
Query: 196 LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG------GDDHNDDN--------VV 241
LPLW S E + I W+ ADII+V+ E+ FL G D ++D V
Sbjct: 377 LPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYSPEV 436
Query: 242 LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAV-----DTTGAGDSFVSGILN 296
+ L+H NLK+L VT G+ YYTKE G V G++ + D + +GD V+G++
Sbjct: 437 VAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLMR 496
Query: 297 CLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339
L +LI D+ L + + +A CG + P KE
Sbjct: 497 MLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKE 539
|
Length = 581 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 1e-49
Identities = 96/290 (33%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 52 EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDS 111
+F+ PGG AN AV +RLG A +G +GDD FG L L+E +D S V
Sbjct: 27 LGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVSYVEVVV 86
Query: 112 TARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEP 169
A T A +T+ GE + P A+ L +++D LI + + L E
Sbjct: 87 GAPTGTAVITVDESGENRIVV--VPGANGELTPADVDAALELIAAADV-----LLLQLEI 139
Query: 170 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229
T LAA+ A+ +G + +P P AR + DI+ ++ E L
Sbjct: 140 PLETVLAALRAARRAGVTVILNP---AP-------ARPLPAELLALVDILVPNETEAALL 189
Query: 230 TG--GDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAG 287
TG D D L +K +IVT G+KG + VP K KAVDTTGAG
Sbjct: 190 TGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAG 249
Query: 288 DSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337
D+F+ + LA + L EA+ FANA AL+VT GA P++PT
Sbjct: 250 DTFIGALAAALARGLS-------LEEAIRFANAAAALSVTRPGAQPSIPT 292
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 156 bits (398), Expect = 2e-45
Identities = 92/292 (31%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 52 EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDS 111
+F+ PGG AN AV +RLG + +GK+GDD FG L LK N +DT V
Sbjct: 22 HGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTVK 81
Query: 112 TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEP 169
T AF+T+ GE + A+ L ++D LI + I + L E
Sbjct: 82 DTPTGTAFITVDDTGENRIVVV--AGANAELTPEDIDAAEALIAESDI-----VLLQLEI 134
Query: 170 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229
T L A +AK+ G + +P + E + DII ++ E L
Sbjct: 135 PLETVLEAAKIAKKHGVKVILNPAPAIKDLDDE---------LLSLVDIITPNETEAEIL 185
Query: 230 TGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAG 287
TG + ++++ EKL +K +I+T GSKG +K+ +P K KAVDTT AG
Sbjct: 186 TGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAG 245
Query: 288 DSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339
D+F LA ++L +A+ FANA A++VT +GA ++P E
Sbjct: 246 DTFNGAFAVALAEGKSLE-------DAIRFANAAAAISVTRKGAQSSIPYLE 290
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 1e-38
Identities = 89/310 (28%), Positives = 131/310 (42%), Gaps = 40/310 (12%)
Query: 31 VVCFGEMLIDFVPTV----GGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD 86
V G + D + V G ++ GG+ N AV +++LG S V +G+
Sbjct: 2 VAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGE 61
Query: 87 DEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESE 146
D G + L+E VDTS VR T +AF+ DG+ + + +P A L ++
Sbjct: 62 DFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFIL--TDGDDNQIAYFYPGAMDELEPND 119
Query: 147 LDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAR 206
+ + I H S + E A LA G +S+DP LP EE
Sbjct: 120 -EADPDGLADIVHLSSGPGLIE-------LARELAAG-GITVSFDPGQELPRLSGEELEE 170
Query: 207 EGIMSIWDQADIIKVSDDEITFL---TGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263
I ++ADI+ V+D E L TG + + V ++++VT G KG
Sbjct: 171 -----ILERADILFVNDYEAELLKERTGLSEAELASGV---------RVVVVTLGPKGAI 216
Query: 264 YYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 322
+ + VP V K VDTTGAGD+F +G L L + L E+L N
Sbjct: 217 VFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAA 269
Query: 323 ALTVTERGAI 332
+L V RGA
Sbjct: 270 SLKVERRGAQ 279
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-30
Identities = 94/331 (28%), Positives = 137/331 (41%), Gaps = 34/331 (10%)
Query: 21 DGGSGAYDRLVV--CFGEMLI--DFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGG 76
GG D +VV +++ D +P VG + F K GG AN AV S+LG
Sbjct: 10 HGGEAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTS--FHKGFGGKGANQAVMASKLGA 67
Query: 77 SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTL-RADGEREFLFFRH 135
A VG +G D FG K N V+TS V + T LA + + G E +
Sbjct: 68 KVAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII-- 125
Query: 136 PSADMLLCESELDKNLIKQGSIFHYGSISLIA-EPCRSTQLAAMNLAKESGSILSYDPNL 194
P A+ L +D +I + + E T L A+ AKE G ++P
Sbjct: 126 PGANNALTPQMVDAQ---TDNIQNICKYLICQNEIPLETTLDALKEAKERGCYTVFNPA- 181
Query: 195 RLPLWPSEEAAR-EGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKL- 252
P+ + A E I + V++ E +TG + D K +L
Sbjct: 182 -----PAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGME--VTDTESAFKASKELQQLG 234
Query: 253 ---LIVTEGSKGCRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308
+I+T G+ GC KE VPG + KAVDTTGAGD FV + ++ ++
Sbjct: 235 VENVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD----- 289
Query: 309 NRLREALLFANACGALTVTERGAIPALPTKE 339
L+E+ AN A++VT G + P
Sbjct: 290 --LKESCKRANRIAAISVTRHGTQSSYPHPS 318
|
Length = 326 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-28
Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 59/335 (17%)
Query: 31 VVCFGEMLIDFVPTV------------GGVSLAEAPAF---------KKAPGGAPANVAV 69
V+ G L+D + V G + LA+ K GG+ AN
Sbjct: 4 VLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIR 63
Query: 70 GISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGERE 129
G + LGGS+AF+G++GDD+ G L L+ VDT + T V + D ER
Sbjct: 64 GAAALGGSAAFIGRVGDDKLGDFLLKDLRAAGVDTR-YQVQPDGPTGTCAVLVTPDAERT 122
Query: 130 FLFF----RHPSADMLLCESELDKNLIKQGSIF---HYGSISLIAEPCRSTQLAAMNLAK 182
+ S D +LD +L+ + Y L+ P + LAA AK
Sbjct: 123 MCTYLGAANELSPD------DLDWSLLAKAKYLYLEGY----LLTVPPEAILLAA-EHAK 171
Query: 183 ESGSILS---YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDN 239
E+G ++ P + + +E ++ + DI+ +++E L + +D
Sbjct: 172 ENGVKIALNLSAPFI-------VQRFKEALLELLPYVDILFGNEEEAEALAEAETTDDLE 224
Query: 240 VVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCL 298
L+ L +++++T+G+KG VP + K VDT GAGD+F G L L
Sbjct: 225 AALKLLALRC-RIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGL 283
Query: 299 AADQNLIKDENRLREALLFANACGALTVTERGAIP 333
+ L E + + A + + G
Sbjct: 284 VQGEP-------LEECIRLGSYAAAEVIQQLGPRL 311
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-25
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 34/288 (11%)
Query: 59 APGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALA 118
A GG AN AV +RLG AF+ +GDD G + L ++ +DT+ V T +A
Sbjct: 37 AFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVA 96
Query: 119 FVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIA-EPCRSTQL 175
+ + +GE H A+ L + ++ LI L+ E T L
Sbjct: 97 LIFVNDEGENSIGI--HAGANAALTPALVEAHRELIANADAL------LMQLETPLETVL 148
Query: 176 AAMNLAKESGS--ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233
AA +AK+ G+ IL+ P LP + DII ++ E LTG
Sbjct: 149 AAAKIAKQHGTKVILNPAPARELPD------------ELLALVDIITPNETEAEKLTGIR 196
Query: 234 DHNDDNVVL--EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFV 291
+DD+ + L ++ +++T GS+G RVPG + +AVDT AGD+F
Sbjct: 197 VEDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFN 256
Query: 292 SGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339
++ L + L EA+ FA+A A+ VT +GA P++P +E
Sbjct: 257 GALVTALLEGKP-------LPEAIRFAHAAAAIAVTRKGAQPSIPWRE 297
|
Length = 306 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 4e-23
Identities = 69/277 (24%), Positives = 103/277 (37%), Gaps = 42/277 (15%)
Query: 56 FKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART 115
+++PGG ANVAV +++LG F LG DE G L+ + D R
Sbjct: 31 SRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGGDKHTVAWRDKPTRK 90
Query: 116 ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQL 175
L+F+ +GER D L K + + + A +
Sbjct: 91 TLSFID--PNGERTITVPGERLEDDL-----------KWPILDEGDGVFITAAAVDKEAI 137
Query: 176 AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH 235
+E+ ++ R+ + + + DI+ S + L
Sbjct: 138 R---KCRETKLVI-LQVTPRVRV--------DELNQALIPLDILIGSRLDPGEL------ 179
Query: 236 NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGIL 295
VV EK+ P + LIVTEG G Y VP K K D+TGAGDSF +G +
Sbjct: 180 ----VVAEKIAGPFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFI 235
Query: 296 NCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332
L + + EAL CGA+ V+ G
Sbjct: 236 YGLLKGWS-------IEEALELGAQCGAICVSHFGPY 265
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 5e-23
Identities = 80/317 (25%), Positives = 111/317 (35%), Gaps = 44/317 (13%)
Query: 31 VVCFGEMLIDFVPTV----GGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD 86
V+ G ++D + V GG A + GG AN AV ++RLGG + +G +GD
Sbjct: 2 VLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGD 61
Query: 87 DEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESE 146
D G ++ L VDTS + AR+ ++ +T + +
Sbjct: 62 DAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPD 121
Query: 147 LDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRLPLWPSEE- 203
L+ L A+ G L D L EE
Sbjct: 122 AILGGA---------DAVLVDGRQPEAALHLAQEARARGIPIPLDLD---GGGLRVLEEL 169
Query: 204 --AAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261
A I S +DDE LE L + + VT G G
Sbjct: 170 LPLADHAICSENFLRPNTGSADDE---------------ALELLASLGIPFVAVTLGEAG 214
Query: 262 CRYYTKEFK-GRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANA 320
C + ++ + VP + VDTTGAGD F + LA LREAL FA+A
Sbjct: 215 CLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASA 267
Query: 321 CGALTVTERGAIPALPT 337
AL G LPT
Sbjct: 268 AAALKCRGLGGRAGLPT 284
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 5e-22
Identities = 76/300 (25%), Positives = 123/300 (41%), Gaps = 60/300 (20%)
Query: 57 KKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART- 115
+ GGA ANVA ++ LG +G +GDDE G +L +L++ +DT G+ D T
Sbjct: 36 EIRLGGA-ANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEGIDTDGIV-DEGRPTT 93
Query: 116 ------ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQ--------GSIFHYG 161
A LR D E + SA+ E L + + ++ S + G
Sbjct: 94 TKTRVIARNQQLLRVDREDD----SPLSAE---EEQRLIERIAERLPEADVVILSDYGKG 146
Query: 162 SIS--LIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 219
++ +I A+E G + DP R S + A ++
Sbjct: 147 VLTPRVIEALI--------AAARELGIPVLVDPKGR-------------DYSKYRGATLL 185
Query: 220 KVSDDEITFLTGGDDHNDDNV--VLEKLFHP-NLKLLIVTEGSKGCRYY--TKEFKGRVP 274
++ E G + ++DD + EKL NL+ L+VT G +G + E + +P
Sbjct: 186 TPNEKEAREALGDEINDDDELEAAGEKLLELLNLEALLVTLGEEGMTLFERDGEVQ-HIP 244
Query: 275 GVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334
+ + D TGAGD+ ++ + LAA + L EA ANA + V + G P
Sbjct: 245 ALAKEVYDVTGAGDTVIATLALALAAGAD-------LEEAAFLANAAAGVVVGKVGTAPV 297
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. Length = 304 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-21
Identities = 78/284 (27%), Positives = 109/284 (38%), Gaps = 47/284 (16%)
Query: 57 KKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTA 116
K PGG NVAV RLG SA++G +G+D+ G + + LK VD S R A
Sbjct: 18 KMYPGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRV-KEGENA 76
Query: 117 LAFVTLRADGEREFLF-------FRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEP 169
+A V L DG+R F HP D + Q + H G S
Sbjct: 77 VADVELV-DGDRIFGLSNKGGVAREHPFEA--------DLEYLSQFDLVHTGIYSHEGH- 126
Query: 170 CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDD-EITF 228
A+ +G+++S+D + R WD + V + F
Sbjct: 127 ----LEKALQALVGAGALISFDFSDR-----------------WDDDYLQLVCPYVDFAF 165
Query: 229 LTGGDDHNDD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAG 287
+ D +++ L++ KL+IVT G G Y V + VDT GAG
Sbjct: 166 FSASDLSDEEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAG 225
Query: 288 DSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331
DSF++G L L A I EA+ A T GA
Sbjct: 226 DSFIAGFLLSLLAGGTAIA------EAMRQGAQFAAKTCGHEGA 263
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 6e-19
Identities = 70/296 (23%), Positives = 115/296 (38%), Gaps = 22/296 (7%)
Query: 37 MLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANI 96
+ +D +P GG A++ ++ GG NV V SRLG + G LG+ + +
Sbjct: 14 LDVDKLPASGGDIEAKSKSYVI--GGG-FNVMVAASRLGIPTVNAGPLGNGNWADQIRQA 70
Query: 97 LKENNVDTSG-VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQG 155
+++ ++ R +A V DGER F+ A+ +
Sbjct: 71 MRDEGIEILLPPRGGDDGGCLVALVE--PDGERSFISI--SGAEQDWSTEWFATLTVAPY 126
Query: 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ 215
+ +L +E L A +G+ L +DP R+ P + +
Sbjct: 127 DYVYLSGYTLASENASKVILLEWLEALPAGTTLVFDPGPRISDIPDTILQA-----LMAK 181
Query: 216 ADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGR-VP 274
I + +E D + L +++ ++V GS G + +P
Sbjct: 182 RPIWSCNREEAAIFAERGDPAAEASAL-RIYAKTAAPVVVRLGSNGAWIRLPDGNTHIIP 240
Query: 275 GVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 330
G K KAVDT GAGD+ G+L LA + L +A+L ANA A+ VT G
Sbjct: 241 GFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 2e-16
Identities = 76/313 (24%), Positives = 123/313 (39%), Gaps = 40/313 (12%)
Query: 45 VGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104
+G V+ A GG NVA + LG +G LG G +LK+ +
Sbjct: 22 LGEVNRVRAVTK--TAGGKGINVARVLKDLGIPVTALGFLGGFT-GEFFVALLKDEGIPD 78
Query: 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIF 158
+ V R + + E E F + E+EL+ K L++ I
Sbjct: 79 AFVEVKGDTRINVKILDEEDGEETEINF-----PGPEISEAELEQFLEQLKALLESDDIV 133
Query: 159 HY-GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI-MSIWDQA 216
GS+ P +L + + ++ G+ + D S EA + W
Sbjct: 134 VLSGSLPPGVPPDAYAEL--IRILRQQGAKVILDT--------SGEALLAALEAKPW--- 180
Query: 217 DIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVP 274
+IK + +E+ L G + ++V+ +L ++ +IV+ G+ G T E
Sbjct: 181 -LIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIVSLGADGALLVTAEGVYFAS 239
Query: 275 GVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG-AIP 333
K + V T GAGDS V+G L L ++L EAL FA ACGA +++G IP
Sbjct: 240 PPKVQVVSTVGAGDSMVAGFLAGLLKGKSLE-------EALRFAVACGAAAASQKGTGIP 292
Query: 334 ALPTKEAALKLLH 346
L + +
Sbjct: 293 DLDQLKKIYAQVT 305
|
Length = 310 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 7e-16
Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 41/311 (13%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEA--PA-FKKAPGGAPANVAVGISRLGGSSAFVGKLGDD 87
+V G ID V G + P K++PGG N+A ++RLG S A + +GDD
Sbjct: 2 IVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDD 61
Query: 88 EFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE--S 145
G + ++ ++ G+ + TA L DG+ ADM + E +
Sbjct: 62 SEGESILEESEKAGLNVRGIVF-EGRSTASYTAILDKDGDLVVAL-----ADMDIYELLT 115
Query: 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES-GSILSY--DPNLRLPLWPSE 202
I++ +L + NL +E+ +L+ + + P+
Sbjct: 116 PDFLRKIRE---------ALKEAKP---IVVDANLPEEALEYLLALAAKHGVPVAFEPTS 163
Query: 203 EAAREGIMSIWDQADIIKVSDDE-ITFLTGGDDHNDDNVVLEKLFH-PNLKLLIVTEGSK 260
+ + + D++ + E ++N+D K+ P +K +IVT G+K
Sbjct: 164 APKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAK 223
Query: 261 GCRYYTK-----EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREAL 315
G + E K V+ TGAGD+FV+G++ L L ++L
Sbjct: 224 G-VLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGM-------SLDDSL 275
Query: 316 LFANACGALTV 326
FA A ALT+
Sbjct: 276 RFAQAAAALTL 286
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 9e-16
Identities = 88/327 (26%), Positives = 135/327 (41%), Gaps = 60/327 (18%)
Query: 51 AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT------ 104
A P K G N A+ +RLG + +G +GD+ +G L ++L E +
Sbjct: 109 ASPPDKKSWEAGGNCNFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEG 168
Query: 105 --SGVRYDSTARTALAFVTL----------RADGEREFLF--FRHPSAD--MLLCESELD 148
+G ++ T L +V + RAD E F SA+ M + +S
Sbjct: 169 TDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISKLSAEAKMAIRQS--- 225
Query: 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLR----LPLWPSEEA 204
K L G +F S S IA +A++ A + G+ + +DP R L P E
Sbjct: 226 KALFCNGYVFDELSPSAIA--------SAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERR 277
Query: 205 AREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL--KLLIVTEGSKGC 262
A E ++ + +D++ ++ +E LTG + ++L P + K ++V GSKG
Sbjct: 278 ALEHLLRM---SDVLLLTSEEAEALTGIRNPIL---AGQELLRPGIRTKWVVVKMGSKGS 331
Query: 263 RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGI----LNCLAADQNLIKDENRLREALLFA 318
T+ P K VDT G GDSF + I ++ L L A
Sbjct: 332 ILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALGYIHNLPLV-----------NTLTLA 380
Query: 319 NACGALTVTERGAIPALPTKEAALKLL 345
NA GA T GA + T E L+LL
Sbjct: 381 NAVGAATAMGCGAGRNVATLEKVLELL 407
|
Length = 470 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 6e-15
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 169 PCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 228
P L A+ A+ G + DP + E + + DI+ +++E
Sbjct: 68 PAPEAVLDALEEARRRGVPVVLDPG-----PRAVRLDGEELEKLLPGVDILTPNEEEAEA 122
Query: 229 LTG--GDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF-KGRVPGVKTKAVDTTG 285
LTG + + L K++IVT G KG T+ + VP K VDTTG
Sbjct: 123 LTGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTG 182
Query: 286 AGDSFVSGILNCLA 299
AGD+F++ + LA
Sbjct: 183 AGDAFLAALAAGLA 196
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 6e-15
Identities = 74/304 (24%), Positives = 109/304 (35%), Gaps = 50/304 (16%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+ G+ +D P +G K GG NVAV +R G + +GDD++G
Sbjct: 3 LATIGDNCVDIYPQLG----------KAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYG 52
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREF-LFFRHPSADMLLCESELDK 149
L L VD S V TA V L D +R F + AD L SE D
Sbjct: 53 TKLKQDLARMGVDISHVHTKH-GVTAQTQVELH-DNDRVFGDYTEGVMADFAL--SEEDY 108
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWPSEEAARE 207
+ Q I H + A +G + ++D + + PLW +
Sbjct: 109 AWLAQYDIVHAAIWGHAED--------AFPQLHAAGKLTAFDFSDKWDSPLW---QTLVP 157
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267
+ D A F + + + ++ + ++IVT G G +
Sbjct: 158 HL----DYA-----------FASAPQEDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDG 202
Query: 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327
R VDT GAGDSF++G L A L +A+ AC A T+
Sbjct: 203 AQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMTLP-------QAMAQGTACAAKTIQ 255
Query: 328 ERGA 331
GA
Sbjct: 256 YHGA 259
|
Length = 260 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 1e-13
Identities = 79/306 (25%), Positives = 116/306 (37%), Gaps = 43/306 (14%)
Query: 39 IDFV-----PTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYML 93
ID G V+ + K GG NVA + LG +G LG G
Sbjct: 11 IDLTIELDQLQPGEVNRVSSTR--KDAGGKGINVARVLKDLGVEVTALGFLGGF-TGDFF 67
Query: 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD----- 148
+LKE + V R + E E + E EL+
Sbjct: 68 EALLKEEGIPDDFVEVAGETRINVKIKEEDGT-ETEINE-----PGPEISEEELEALLEK 121
Query: 149 -KNLIKQGSIFHY-GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAR 206
K L+K+G I GS+ +L LA+E G R+ L S EA
Sbjct: 122 LKALLKKGDIVVLSGSLPPGVPADFYAELVR--LAREKG--------ARVILDTSGEALL 171
Query: 207 EGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRY 264
+ + + +IK + +E+ L G ++++V+ KL + ++V+ G+ G
Sbjct: 172 AALAA---KPFLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLVSLGADGALL 228
Query: 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGAL 324
TK+ R K K V T GAGDS V+G + LA +L EAL A A G+
Sbjct: 229 VTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLSLE-------EALRLAVAAGSA 281
Query: 325 TVTERG 330
T G
Sbjct: 282 TAFSPG 287
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 1e-12
Identities = 80/330 (24%), Positives = 128/330 (38%), Gaps = 57/330 (17%)
Query: 39 IDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLAN 95
ID V G++ E A +K GG NVA ++RLG G LG + +
Sbjct: 10 IDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGFLGGFTGEF-IEA 68
Query: 96 ILKENNVDTSGVRYDSTARTALAFVTLRADGEREF-LFFRHPSADMLLCESELDKNLIKQ 154
+L E + V R + E L P E EL++ L+++
Sbjct: 69 LLAEEGIKNDFVEVKGETRINVKIKE---SSGEETELNEPGPEIS----EEELEQ-LLEK 120
Query: 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI--------------LSYDPNLRLPLWP 200
+ E S + + SGS+ ++ ++ L
Sbjct: 121 -----------LRELLASGDIVVI-----SGSLPPGVPPDFYAQLIAIARKRGAKVILDT 164
Query: 201 SEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEG 258
S EA RE + + + +IK + +E+ L G + ++ ++ +L + ++V+ G
Sbjct: 165 SGEALREALAA---KPFLIKPNHEELEELFGRELKTEEEIIEAARELLDRGAENVLVSLG 221
Query: 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 318
+ G TKE + K + V+T GAGDS V+G L LA +L EAL FA
Sbjct: 222 ADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLSLE-------EALRFA 274
Query: 319 NACGALTVTERGAIPALPTKEAALKLLHTV 348
A G+ G LP E +LL V
Sbjct: 275 VAAGSAAAFSPGT--GLPDPEDVEELLDQV 302
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 4e-12
Identities = 79/302 (26%), Positives = 116/302 (38%), Gaps = 70/302 (23%)
Query: 57 KKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTA 116
+ GGA ANVA I+ LG VG +GDDE G L +L E +DTSG+ D T
Sbjct: 44 EDRLGGA-ANVARNIASLGARVFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTT 102
Query: 117 --LAFVT-----LRADGEREFLF-----------FRH--PSADMLLCESELDKNLIKQGS 156
+ LR D E R SAD ++ S+ K G
Sbjct: 103 TKTRVLARNQQLLRVDFEERDPINAELEARLLAAIREQLASADAVVL-SDYAK-----GV 156
Query: 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQA 216
+ +IA A++ G + DP + S + A
Sbjct: 157 LTPRVVQEVIA------------AARKHGKPVLVDPKGK-------------DFSRYRGA 191
Query: 217 DIIKVSDDEITFLTGGDDHNDDNVV------LEKLFHPNLKLLIVTEGSKGCRYYTKEFK 270
+I + E G D + +V LE+L +L+ L+VT KG +T+E +
Sbjct: 192 TLITPNRKEAEAAVGACD-TEAELVQAAEKLLEEL---DLEALLVTRSEKGMTLFTREGE 247
Query: 271 GR-VPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+P + D TGAGD+ ++ + LAA +L EA ANA + V +
Sbjct: 248 PIHIPAQAREVYDVTGAGDTVIATLALALAAGASLE-------EACRLANAAAGVVVGKL 300
Query: 330 GA 331
G
Sbjct: 301 GT 302
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 315 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-11
Identities = 81/260 (31%), Positives = 111/260 (42%), Gaps = 40/260 (15%)
Query: 52 EAPAFKKAPGGAPANVAVGISR-LGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD 110
+ K GG+ AN G+S G S+ +G GDDE G + + + + VD S +R
Sbjct: 77 DLSPIKTMAGGSVANTIRGLSAGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAK 136
Query: 111 STARTALAFVTLRADGEREFLFFRHP--SADMLLCESELDKNLIKQGS---IFHYG--SI 163
TA + A G R P S+ + L EL K K GS + YG ++
Sbjct: 137 K-GPTAQCVCLVDALGNRTM----RPCLSSAVKLQADELTKEDFK-GSKWLVLRYGFYNL 190
Query: 164 SLIAEPCRSTQLAAMNLAKESGSILSYD-------PNLRLPLWPSEEAAREGIMSIWDQA 216
+I AA+ LAK+ G +S D N R PL E+ +
Sbjct: 191 EVI--------EAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGK---------I 233
Query: 217 DIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV 276
D+ ++DE L G+ +D LE L +VT GSKGC + RVP +
Sbjct: 234 DLCFANEDEARELLRGEQESDPEAALEFL-AKYCNWAVVTLGSKGCIARHGKEVVRVPAI 292
Query: 277 K-TKAVDTTGAGDSFVSGIL 295
T AVD TGAGD F SG L
Sbjct: 293 GETNAVDATGAGDLFASGFL 312
|
Length = 367 |
| >gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 72/289 (24%), Positives = 110/289 (38%), Gaps = 52/289 (17%)
Query: 57 KKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTA 116
++ GGA ANVA I+ LG ++ VG +G DE G L +LK N +D S + D T
Sbjct: 47 EERLGGA-ANVAKNIASLGANAYLVGVVGKDEAGKALIELLKANGID-SDLLRDKNRPTI 104
Query: 117 --LAFVT-----LRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIF---HYGSIS 164
L ++ LR D E +F + L+ KN +K Y
Sbjct: 105 VKLRVLSRNQQLLRLDFEEKF--------PIEDENKLLEKIKNALKSFDALVLSDYAKGV 156
Query: 165 LIAEPCRSTQLAAM-NLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSD 223
L T + M +LA+E+G + DP + + A +I +
Sbjct: 157 L-------TNVQKMIDLAREAGIPVLVDPK------GKD-------FEKYRGATLITPNL 196
Query: 224 DEITFLTG--GDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAV 281
E G + + + +L L+VT KG + + P +
Sbjct: 197 KEFEEAVGKCKSEEELEERGQKLKEELDLSALLVTRSEKGMTLFQEGKPLHFPARAKEVY 256
Query: 282 DTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 330
D TGAGD+ ++ + LAA L EA ANA + V + G
Sbjct: 257 DVTGAGDTVIAVLAAALAA-------GASLEEACELANAAAGIVVGKLG 298
|
Length = 467 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 1e-10
Identities = 72/306 (23%), Positives = 117/306 (38%), Gaps = 54/306 (17%)
Query: 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAF 119
GG NV+ + LG +G LG ++ A L+E + T VR R
Sbjct: 34 AGGKGINVSRVLKNLGVDVVALGFLGGFTGDFIEAL-LREEGIKTDFVRVPGETRIN--- 89
Query: 120 VTLRADGEREF-LFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAM 178
V ++ E L P E EL+ L+++ + +
Sbjct: 90 VKIKEPSGTETKLNGPGPEIS----EEELE-ALLEK-----------LRAQLAEGDWLVL 133
Query: 179 NLAKESGSI--------------LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDD 224
SGS+ L+ + ++ L S EA R+G+ + + +IK +D+
Sbjct: 134 -----SGSLPPGVPPDFYAELIALAREKGAKVILDTSGEALRDGLKA---KPFLIKPNDE 185
Query: 225 EITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVD 282
E+ L G + + ++ +L + ++++ G+ G TKE K + V
Sbjct: 186 ELEELFGRELKTLEEIIEAARELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVS 245
Query: 283 TTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342
T GAGDS V+G L L + +L EAL A A G+ G LP E
Sbjct: 246 TVGAGDSMVAGFLAGLESGLSLE-------EALRLAVAAGSAAAFSEGT--GLPDPEDIE 296
Query: 343 KLLHTV 348
+LL V
Sbjct: 297 ELLPQV 302
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 2e-08
Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 253 LIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF----VSGILNCLAADQNLIKDE 308
+IVT G KGCR Y K+ + RVP VD TGAGDSF V+G++ LA
Sbjct: 206 VIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLAVPD------ 259
Query: 309 NRLREALLFANACGALTVTERGAIP 333
A L N G+L V + G IP
Sbjct: 260 -----AALLGNYFGSLAVEQVG-IP 278
|
Length = 335 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 2e-08
Identities = 66/296 (22%), Positives = 102/296 (34%), Gaps = 56/296 (18%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+V G + ID + T G PGG ++ +SRLG + V K+G D
Sbjct: 2 IVIIGHVTIDEIVTNGSG--------VVKPGGPATYASLTLSRLGLTVKLVTKVGRD--- 50
Query: 91 YMLANILKENNVDTSGVRY--DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD 148
K +++ +G+ + T + +G L + C + D
Sbjct: 51 ----YPDKWSDLFDNGIEVISLLSTETTTFELNYTNEGRTRTL--------LAKCAAIPD 98
Query: 149 KNLIKQ---GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAA 205
I G + P +L ++ I S D L E+
Sbjct: 99 TESPLSTITAEIVILGPVPEEISP---------SLFRKFAFI-SLDAQGFLRRANQEKLI 148
Query: 206 REGIMSIWDQADIIKVSDDEI-TFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264
+ I+ D++K+S E T + L K K +IVT+G +G
Sbjct: 149 KCVIL---KLHDVLKLSRVEAEVISTPTE-----LARLIKETGV--KEIIVTDGEEGGYI 198
Query: 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANA 320
+ K +P K VD TGAGD F LAA ++EA FA A
Sbjct: 199 FDGNGKYTIPASKKDVVDPTGAGDVF-------LAAFLYSRLSGKDIKEAAEFAAA 247
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 77/332 (23%), Positives = 123/332 (37%), Gaps = 79/332 (23%)
Query: 31 VVCFGEMLIDFVPTV------------GGVSLAE------------APAFKKAPGGAPAN 66
++ FG L+D V G LAE P PGG+ N
Sbjct: 8 LLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALN 67
Query: 67 VAVGISRLG--------GSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALA 118
A R+ G +VG +GDD F +L +++ V+ Y + A T
Sbjct: 68 TA----RVAQWMLQAPKGFVCYVGCVGDDRFAEILKEAAEKDGVEML-FEYTTKAPTGTC 122
Query: 119 FV-------TLRAD-GEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPC 170
V +L A+ G L H +S + IK +++ L P
Sbjct: 123 AVLVCGKERSLVANLGAANHLSAEH-------MQSHAVQEAIKTAQLYYLEGFFLTVSPN 175
Query: 171 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230
Q+A A+ESG + NL P + E ++ + DI+ +++E T
Sbjct: 176 NVLQVA--KHARESGKLFCL--NLSAPF--ISQFFFERLLQVLPYVDILFGNEEE--AKT 227
Query: 231 GGD----DHNDDNVVLEKLF--------HPNLKLLIVTEGSKGCRYYTKEFKGRVPGV-- 276
D D + ++ P +L++ T+G + TK+ VP V
Sbjct: 228 FAKAMKWDTEDLKEIAARIAMLPKYSGTRP--RLVVFTQGPEPTLIATKDGVTSVP-VPP 284
Query: 277 --KTKAVDTTGAGDSFVSGILNCLAADQNLIK 306
+ K VDT GAGD+FV G L A +++ +
Sbjct: 285 LDQEKIVDTNGAGDAFVGGFLAQYANGKDIDR 316
|
Length = 345 |
| >gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDS 111
PGGA ANVA+ I+ LG + VG G DE L+ +L V V +
Sbjct: 50 PGGA-ANVAMNIASLGAQARLVGLTGIDEAARALSKLLAAVGVKCDFVSVPT 100
|
Length = 473 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 56 FKKAPGGAPANVAVGISRLGGSS--------AFVGKLGDDEFGYMLANILKENNVD-TSG 106
+K + GG+ +N V ++RLG S A G +G D G L+ NV S
Sbjct: 121 YKASAGGSLSNTLVALARLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQ 180
Query: 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE---SELDKN--LIKQGSIFHY- 160
D T T + T D +R L ++ S+ + S + K+ L+ +G ++
Sbjct: 181 PVKDGTTGTVIVLTT--PDAQRTMLSYQGTSSTVNYDSCLASAISKSRVLVVEGYLWELP 238
Query: 161 GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ-ADII 219
+I IA+ C A +A + D + E R+ + ADI+
Sbjct: 239 QTIEAIAQACEEAHRAGALVAVTAS-----DVSCI-------ERHRDDFWDVMGNYADIL 286
Query: 220 KVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTK 279
+ DE L G L H L+ VT+G++G K +P
Sbjct: 287 FANSDEARALCGLGSEESPESATRYLSH-FCPLVSVTDGARGSYIGVKGEAVYIPPSPCV 345
Query: 280 AVDTTGAGDSFVSGIL 295
VDT GAGD++ +GIL
Sbjct: 346 PVDTCGAGDAYAAGIL 361
|
Length = 426 |
| >gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 203 EAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSK 260
E + + + D++ ++D E LTG N+V + K LI+ G
Sbjct: 151 SIKPEKLKKVLAKVDVVIINDGEARQLTG-----AANLVKAARLILAMGPKALIIKRGEY 205
Query: 261 GCRYYTKEFKGRVPGVKTKAV-DTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFAN 319
G +T + P ++V D TGAGD+F G + LA+ ++ E +R A+++ +
Sbjct: 206 GALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKDT--SEANMRRAIIYGS 263
Query: 320 ACGALTVTERG 330
A + V + G
Sbjct: 264 AMASFCVEDFG 274
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 277 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 100.0 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 100.0 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 99.96 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.96 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.82 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.82 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.81 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.8 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.8 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.79 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.78 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.78 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.77 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.76 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.75 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.74 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.67 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.64 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.61 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.6 | |
| PLN02978 | 308 | pyridoxal kinase | 99.6 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.54 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.53 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.51 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.49 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.46 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.44 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.39 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.31 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.28 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.11 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 99.02 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.64 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.56 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 98.19 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 98.19 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 98.15 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.85 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 97.76 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.74 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 97.64 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.55 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.47 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 97.23 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 96.93 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 96.62 | |
| KOG4184 | 478 | consensus Predicted sugar kinase [Carbohydrate tra | 93.24 | |
| COG4809 | 466 | Archaeal ADP-dependent phosphofructokinase/glucoki | 90.29 |
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=372.06 Aligned_cols=322 Identities=78% Similarity=1.238 Sum_probs=278.4
Q ss_pred CCCCCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 24 SGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 24 ~~~~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+..++++|+++|++++|+++..++.+......+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+
T Consensus 6 ~~~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~GI~ 85 (330)
T PLN02323 6 STAESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGDDEFGHMLADILKKNGVN 85 (330)
T ss_pred ccCCCCcEEEechhhhhhccCCCCCCcccccceeecCCChHHHHHHHHHhcCCceeEEEEecCChhHHHHHHHHHHcCCC
Confidence 44577889999999999999887777655667789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++++.+.++.+|+.+++.++++|+|++.+++.++++..+++++++.+.++.++++|++++....+........+++.+++
T Consensus 86 ~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 165 (330)
T PLN02323 86 NEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLITEPCRSAHLAAMKIAKE 165 (330)
T ss_pred CcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHccCCEEEEechhccCchHHHHHHHHHHHHHH
Confidence 99999999889999999888889999888765666667888888777789999999988765555455667788999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
.|.++++||+.+...|.+.+..++.+.++++++|++++|++|+..+++....+... +. +++..|++.||||+|++|++
T Consensus 166 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~-~~-~~~~~g~~~vvvt~G~~G~~ 243 (330)
T PLN02323 166 AGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDT-VV-KLWHPNLKLLLVTEGEEGCR 243 (330)
T ss_pred cCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHH-HH-HHHhcCCCEEEEecCCCceE
Confidence 99999999998888887777778888999999999999999999999875443222 33 45567999999999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
++.+++.+++|+++++++|||||||+|.|||++++++|++...+..++++|+++|+++|++++++.|+.+++|+.+++++
T Consensus 244 ~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~~~g~~~~~~~~~~v~~ 323 (330)
T PLN02323 244 YYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTTERGAIPALPTKEAVLK 323 (330)
T ss_pred EEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHhccCCccCCCCHHHHHH
Confidence 99888778899999999999999999999999999999752112234899999999999999999999888899999999
Q ss_pred HHhh
Q 018696 344 LLHT 347 (351)
Q Consensus 344 ~l~~ 347 (351)
++++
T Consensus 324 ~l~~ 327 (330)
T PLN02323 324 LLKK 327 (330)
T ss_pred HHHH
Confidence 8865
|
|
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=366.07 Aligned_cols=321 Identities=37% Similarity=0.622 Sum_probs=262.3
Q ss_pred CCceEEEEccceeecccCCCCCCCC--------------CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHH
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA--------------EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYM 92 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~--------------~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~ 92 (351)
-++.|+++|++.||++......... ....+...+||++.|+|.+|++||.++.++|.||+|.+|++
T Consensus 124 ~~~~v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~GGa~aNVAvaLARLG~~vafIG~VGdD~fG~~ 203 (496)
T PLN02543 124 DPPLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRLGGRAAFMGKVGDDDFGEE 203 (496)
T ss_pred CCCeEEEeChhhhhhcCCCcccccccccccccccccccccCCeeEeccCcHHHHHHHHHHHCCCCEEEEEEeCCCHHHHH
Confidence 4567999999999999864321110 34567899999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhH
Q 018696 93 LANILKENNVDTSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 171 (351)
Q Consensus 93 i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~ 171 (351)
+++.|++.|||++++.+.++.+|+.+++.++ .++.+.+.+++..+++..+.+++++...+++++++|++++.+..+...
T Consensus 204 l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~~~l~~a~ilh~~~~~l~~~~~~ 283 (496)
T PLN02543 204 LVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNLAVLKEARMFHFNSEVLTSPSMQ 283 (496)
T ss_pred HHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCHhHhCCCceEEECChhhcCchHH
Confidence 9999999999999999999999999988874 233366654455677777888888878899999999999876666667
Q ss_pred HHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC--------CC-------
Q 018696 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--------HN------- 236 (351)
Q Consensus 172 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--------~~------- 236 (351)
+....+++.+++.|+.|+|||+.+..+|.+.+...+.+.++++++|++++|++|++.+++... .+
T Consensus 284 ~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~~~~~~~~~~~~~~~~~ 363 (496)
T PLN02543 284 STLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYYERKRNYPPQYYAESFE 363 (496)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcccccccccchhhhhhhh
Confidence 888999999999999999999999999988888888899999999999999999999998541 11
Q ss_pred -----------hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCc-----ccccccCCCCchHHHHHHHHHHHh
Q 018696 237 -----------DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV-----KTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 237 -----------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~-----~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
... .+..+...|++.||||+|++|++++.++....++.. +..+||||||||+|.|||+++|++
T Consensus 364 ~~~~~~~~~~~~~~-~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~~~VDTTGAGDAF~AGfL~~Ll~ 442 (496)
T PLN02543 364 QTKNWRDYYHYTPE-EIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITPFTCDRTGSGDAVVAAIMRKLTT 442 (496)
T ss_pred hhhcccccccCCHH-HHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCCCCCcCCCchHHHHHHHHHHHHHh
Confidence 112 245677789999999999999999876422222111 112489999999999999999996
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHhhh
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTV 348 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~~~ 348 (351)
+.....++.++++|+++|+++||+++++.|+.+++|+.+++++|++++
T Consensus 443 ~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~ 490 (496)
T PLN02543 443 CPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQV 490 (496)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhh
Confidence 221000112299999999999999999999999999999999999875
|
|
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-48 Score=366.29 Aligned_cols=317 Identities=33% Similarity=0.572 Sum_probs=264.2
Q ss_pred CCceEEEEccceeecccCCCCCC--------------CCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHH
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVS--------------LAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYM 92 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~--------------~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~ 92 (351)
.++.|++||.+.+|++....... ..+...+...+||++.|+|.+|++||.++.++|.||+|.+|++
T Consensus 195 ~~~~V~~iGe~l~D~~p~g~~~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLARLG~~v~fIg~VGdD~~G~~ 274 (581)
T PLN02967 195 WPPLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASLGGKVAFMGKLGDDDYGQA 274 (581)
T ss_pred CCCeEEEECchhheecccCccchhhhhccccccccccccCccceeeecCcHHHHHHHHHHHCCCCEEEEEEeCCCHHHHH
Confidence 45679999999999976421110 0134567888999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHH
Q 018696 93 LANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRS 172 (351)
Q Consensus 93 i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (351)
+++.|++.||+++++...++.+|+.+++.++.+|++++. ++.++++..+..+++....+.+++++|++++.+..+...+
T Consensus 275 ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~-~~~~gAd~~L~~~di~~~~l~~A~i~hfgg~~ll~e~~~~ 353 (581)
T PLN02967 275 MLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTT-CVKPCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRS 353 (581)
T ss_pred HHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEE-EecCChhhhCChhhcCHhHhcCCCEEEEeCchhcccchHH
Confidence 999999999999999998889999999999999987775 4457788888888887778899999999998766666778
Q ss_pred HHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCCh--------------h
Q 018696 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHND--------------D 238 (351)
Q Consensus 173 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~--------------~ 238 (351)
.+..+++.+++.|++++|||+++.++|.+.+.+.+.+.++++++|||++|++|+..+++..+.++ .
T Consensus 354 all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e~~~~~~~~~~~~~~~ 433 (581)
T PLN02967 354 TTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYS 433 (581)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCccccccccccchhccccch
Confidence 89999999999999999999999999987777788889999999999999999999998543110 1
Q ss_pred HHHHHHHhcCCCeEEEEeeCCcceEEEecCc---eeeecCcccc--cccCCCCchHHHHHHHHHHHhcCCcccchHHHHH
Q 018696 239 NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF---KGRVPGVKTK--AVDTTGAGDSFVSGILNCLAADQNLIKDENRLRE 313 (351)
Q Consensus 239 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~---~~~v~~~~~~--~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~ 313 (351)
...++.+...|++.||||+|++|++++.+++ ...+++++++ +||||||||+|.|||+++|++|.....+..++++
T Consensus 434 ~e~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL~~Ll~g~~~~~g~~~Lee 513 (581)
T PLN02967 434 PEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLMRMLTVQPHLITDKGYLEK 513 (581)
T ss_pred HHHHHHHHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHHHHHHhccCcccccccHHH
Confidence 1245567777999999999999999988754 3345556666 5999999999999999999985110000123999
Q ss_pred HHHHHHHHHhHHhcccCCCCCCCCHHHHHHH
Q 018696 314 ALLFANACGALTVTERGAIPALPTKEAALKL 344 (351)
Q Consensus 314 a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~ 344 (351)
|+++|+++||++++..|+.+++|+.++|++-
T Consensus 514 aLrfAnAaAAL~vt~~GA~~glPt~~eV~~~ 544 (581)
T PLN02967 514 TIKYAIDCGVIDQWLLARTRGFPPKEDMEDE 544 (581)
T ss_pred HHHHHHHHHHHHhccCCCccCCCCHHHHhhh
Confidence 9999999999999999999999999999753
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=344.80 Aligned_cols=306 Identities=29% Similarity=0.369 Sum_probs=257.3
Q ss_pred CCCCCCCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHH
Q 018696 22 GGSGAYDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANIL 97 (351)
Q Consensus 22 ~~~~~~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l 97 (351)
++.+..+++|+|+|.+++|+++.++..+.. ....+...+||.+.|+|.+|++||.++.++|.+|+|.+|+.+++.|
T Consensus 9 ~~~~~~~~~vlviG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~vG~D~~g~~i~~~l 88 (326)
T PTZ00292 9 SHGGEAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNF 88 (326)
T ss_pred cccCCCCCCEEEEccceeeEEEecCCCCCCCCceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEEECCChhHHHHHHHH
Confidence 345566778999999999999988876554 2445678899999999999999999999999999999999999999
Q ss_pred HHCCCCCCCeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccch--hhhcC-ccEEEEccccccCchhHHH
Q 018696 98 KENNVDTSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDK--NLIKQ-GSIFHYGSISLIAEPCRST 173 (351)
Q Consensus 98 ~~~gid~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~-~~~~~~~~~~~~~~~~~~~ 173 (351)
++.||+++++...++.+|++++++++ .+|++.+.++ ++++..++++.++. ..+.. ++++++++ ..+.+.
T Consensus 89 ~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~ 161 (326)
T PTZ00292 89 KRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGANNALTPQMVDAQTDNIQNICKYLICQN-----EIPLET 161 (326)
T ss_pred HHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEe--CCccccCCHHHHHHHHHHhhhhCCEEEECC-----CCCHHH
Confidence 99999999998888889999999988 7888888776 45555677766542 34566 78887654 224467
Q ss_pred HHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCCCe
Q 018696 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPNLK 251 (351)
Q Consensus 174 ~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g~~ 251 (351)
..++++.+++.+.++++|++.+...|. .+.+.++++++|++++|++|++.+++... .++...+++.+.+.|++
T Consensus 162 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~ 236 (326)
T PTZ00292 162 TLDALKEAKERGCYTVFNPAPAPKLAE-----VEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVE 236 (326)
T ss_pred HHHHHHHHHHcCCEEEEECCCCccccc-----cccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCC
Confidence 778899999999999999986543321 25677888999999999999999988653 23334456778888999
Q ss_pred EEEEeeCCcceEEEecCc-eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccC
Q 018696 252 LLIVTEGSKGCRYYTKEF-KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 330 (351)
Q Consensus 252 ~vvvt~G~~G~~~~~~~~-~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g 330 (351)
.||||+|++|++++.+++ .+++|+++++++|+|||||+|+|||++++++|++ +++|+++|+++|++++++.|
T Consensus 237 ~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~Aa~~v~~~G 309 (326)
T PTZ00292 237 NVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-------LKESCKRANRIAAISVTRHG 309 (326)
T ss_pred eEEEEeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCC
Confidence 999999999999988764 5889999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHh
Q 018696 331 AIPALPTKEAALKLLH 346 (351)
Q Consensus 331 ~~~~~~~~~~v~~~l~ 346 (351)
+..++|+.+++++.++
T Consensus 310 ~~~~~~~~~~~~~~~~ 325 (326)
T PTZ00292 310 TQSSYPHPSELPADVK 325 (326)
T ss_pred ccccCCCHHHHHHHhc
Confidence 9888899999988765
|
|
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=342.08 Aligned_cols=293 Identities=28% Similarity=0.391 Sum_probs=252.6
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|++++|+++.++..|.. ....++..+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|+++||+++
T Consensus 4 ~i~~iG~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~ 83 (306)
T PRK11142 4 KLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTA 83 (306)
T ss_pred cEEEECCceeeEEEEeCCCCCCCCeeEeccceecCCCcHHHHHHHHHhcCCcEEEEEEECCChhHHHHHHHHHHcCCChh
Confidence 6999999999999988877553 244678889999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++...++.+|+.++++++.+|++.+.++ ++....+++++++ .+.+.+++++|++.. .+.+.+.++++.+++
T Consensus 84 ~i~~~~~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~~ 156 (306)
T PRK11142 84 PVSVIKGESTGVALIFVNDEGENSIGIH--AGANAALTPALVEAHRELIANADALLMQLE-----TPLETVLAAAKIAKQ 156 (306)
T ss_pred hEEEcCCCCCCEEEEEECCCCCEEEEEe--CCccccCCHHHHHHHHhhhccCCEEEEeCC-----CCHHHHHHHHHHHHH
Confidence 9988889999999999888899888776 4455557776664 255889999988642 245677788999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.++++|++.... ....+++++|++++|++|++.+++.... ++..+.++.+.+.|++.+|||+|++|
T Consensus 157 ~g~~v~~d~~~~~~----------~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 226 (306)
T PRK11142 157 HGTKVILNPAPARE----------LPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSRG 226 (306)
T ss_pred cCCEEEEECCCCcc----------cCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHHhCCCeEEEEECCCc
Confidence 99999999974322 1245778999999999999999986432 23344667788889999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++.+++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++|+.++++.|+.+++|+.+++
T Consensus 227 ~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~~~~~ 299 (306)
T PRK11142 227 VWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-------LPEAIRFAHAAAAIAVTRKGAQPSIPWREEI 299 (306)
T ss_pred EEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCcccccCCCHHHH
Confidence 999888888899999999999999999999999999999999 9999999999999999999998888999999
Q ss_pred HHHHh
Q 018696 342 LKLLH 346 (351)
Q Consensus 342 ~~~l~ 346 (351)
+++++
T Consensus 300 ~~~~~ 304 (306)
T PRK11142 300 DAFLQ 304 (306)
T ss_pred HHHHh
Confidence 98876
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=348.92 Aligned_cols=318 Identities=20% Similarity=0.217 Sum_probs=262.9
Q ss_pred ccccCCCCCCCCceEEEEccceeecccCCCC-------CCCCC-----------------CCCccccCCChHHHHHHHHH
Q 018696 17 SASMDGGSGAYDRLVVCFGEMLIDFVPTVGG-------VSLAE-----------------APAFKKAPGGAPANVAVGIS 72 (351)
Q Consensus 17 ~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~-------~~~~~-----------------~~~~~~~~GG~~~n~a~~l~ 72 (351)
..+++....+++++|+++|++++|++..++. .|+.. ...+...+||++.|+|++|+
T Consensus 58 ~~~~~~~~~~~~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~Avala 137 (426)
T PLN02813 58 FGPIPEKAVPERWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALA 137 (426)
T ss_pred cCCCCcccCCCcceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHH
Confidence 3455555667889999999999999998887 56432 23467889999999999999
Q ss_pred HcC--------CCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCc
Q 018696 73 RLG--------GSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE 144 (351)
Q Consensus 73 ~lG--------~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 144 (351)
+|| .+|.++|.+|+|.+|+++++.|++.||++.++.+ .+.+|++++++++++|+|++..+. +++..++.
T Consensus 138 rLG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~-~~~~Tg~~~ilv~~~gertii~~~--Ga~~~l~~ 214 (426)
T PLN02813 138 RLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPV-KDGTTGTVIVLTTPDAQRTMLSYQ--GTSSTVNY 214 (426)
T ss_pred HhccccccCCCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceec-CCCCceEEEEEEcCCCCceeeecc--CchhhCCc
Confidence 999 7999999999999999999999999999998764 456899999999999999988874 45555666
Q ss_pred cccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHH-HHHHhhhcCcEEEeCH
Q 018696 145 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE-GIMSIWDQADIIKVSD 223 (351)
Q Consensus 145 ~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~~~~~l~~~dvl~~N~ 223 (351)
+++....+++++++|+.++.+..+...+.+.++++.+++.|+++++|+..... ...+++ .+..+++++|++++|+
T Consensus 215 ~~~~~~~i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~----~~~~~~~l~~~ll~~vDil~~Ne 290 (426)
T PLN02813 215 DSCLASAISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSC----IERHRDDFWDVMGNYADILFANS 290 (426)
T ss_pred cccCHHHHhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcch----hhhhHHHHHHHHHhcCCEEEeCH
Confidence 66666778999999998865433333467888999999999999999863210 111222 3344568999999999
Q ss_pred HHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcC-
Q 018696 224 DEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQ- 302 (351)
Q Consensus 224 ~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~- 302 (351)
+|+..+++....+....+++.| ..+++.||||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|+
T Consensus 291 ~Ea~~l~g~~~~~~~~~a~~~L-~~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Agfl~~l~~G~~ 369 (426)
T PLN02813 291 DEARALCGLGSEESPESATRYL-SHFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRGVS 369 (426)
T ss_pred HHHHHHhCCCCCCCHHHHHHHH-HcCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHHHHHHHHcCCC
Confidence 9999999865444444455555 46889999999999999998888999999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHhhhc
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~~~~ 349 (351)
+ +++|+++|+++|+.++++.|+...+|+.+++.+.++++.
T Consensus 370 ~-------l~~al~~A~a~Aa~~v~~~Ga~~~~~~~~e~~~~~~~~~ 409 (426)
T PLN02813 370 D-------LRGMGELAARVAATVVGQQGTRLRVEDAVELAESFALHL 409 (426)
T ss_pred C-------HHHHHHHHHHHHHHHHcccCCCcCHHHHHHHHHHHHHHh
Confidence 8 999999999999999999999988899999999888764
|
|
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-46 Score=337.06 Aligned_cols=299 Identities=41% Similarity=0.672 Sum_probs=254.7
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+++|++++|++.... ......+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|+++||+++++..
T Consensus 4 ~il~iG~~~iD~~~~~~-------~~~~~~~GG~~~N~a~~l~~LG~~~~~v~~vG~D~~g~~i~~~l~~~gI~~~~~~~ 76 (304)
T PRK09434 4 KVWVLGDAVVDLIPEGE-------NRYLKCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRL 76 (304)
T ss_pred cEEEecchheeeecCCC-------CceeeCCCChHHHHHHHHHHcCCCceEEEEecCchHHHHHHHHHHHcCCCCcceEE
Confidence 79999999999985321 23567899999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
.++.+|+.+++.++++|+|++.++..++++..++.++++ .+++++++|++++....+...+...++++.+++.+.+++
T Consensus 77 ~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (304)
T PRK09434 77 DPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP--PFRQGEWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVS 154 (304)
T ss_pred cCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh--hhcCCCEEEEccccccCchHHHHHHHHHHHHHHcCCEEE
Confidence 888999999999888888887666555555455555543 367899999988765555555677789999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhc-CCCeEEEEeeCCcceEEEecC
Q 018696 190 YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFH-PNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~ 268 (351)
+|++.+...|...+.+++.+.++++++|++++|++|+..+++..+ ..++++++.+ .|++.+|||+|++|++++.++
T Consensus 155 ~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~~---~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~ 231 (304)
T PRK09434 155 FDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQ---LEDAIYALADRYPIALLLVTLGAEGVLVHTRG 231 (304)
T ss_pred ECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCCC---HHHHHHHHHhhcCCcEEEEEecCCceEEEeCC
Confidence 999987777877777788888999999999999999999988643 3346677766 789999999999999999888
Q ss_pred ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 269 ~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
+.+++|+++++++|||||||+|+|||++++++|++. .+..++++|+++|+++|++++++.|+..++|+.+++
T Consensus 232 ~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~-~~~~~~~~a~~~a~~~Aa~~v~~~g~~~~~~~~~~~ 303 (304)
T PRK09434 232 QVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLW-TDEAELAEIIAQAQACGALATTAKGAMTALPNRQEL 303 (304)
T ss_pred ceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCc-cchHHHHHHHHHHHHHHHHHHcccCCcCCCCChHHc
Confidence 889999999999999999999999999999999731 122349999999999999999999998888888765
|
|
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=349.14 Aligned_cols=313 Identities=25% Similarity=0.333 Sum_probs=255.9
Q ss_pred CCCCceEEEEccceeecccCCCCCCCCCC---------------CCccccCCChHHHHHHHHHHcCCCeEEEeecCCChH
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGGVSLAEA---------------PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~~~~~~~---------------~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~ 89 (351)
..++++|+++|++++|+++.++..|.... .......|| +.|+|.+|++||.+|.++|.+|+|.+
T Consensus 69 ~~~~~~vl~lG~~~vD~i~~V~~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLarLG~~v~lig~VG~D~~ 147 (470)
T PLN02341 69 AGKEIDVATLGNLCVDIVLPVPELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAAARLGLRCSTIGHVGDEIY 147 (470)
T ss_pred ccccccEEEECCcceeEEEecCCCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHHHHcCCCeEEEEEecCcHH
Confidence 35678999999999999999988876431 234456788 58999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCeeecC--------CCCCeEEEEEEecCCCceEEEecCCccccc---CC-ccccchhhhcCccE
Q 018696 90 GYMLANILKENNVDTSGVRYDS--------TARTALAFVTLRADGEREFLFFRHPSADML---LC-ESELDKNLIKQGSI 157 (351)
Q Consensus 90 g~~i~~~l~~~gid~~~v~~~~--------~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~---~~-~~~i~~~~i~~~~~ 157 (351)
|+++++.|++.||+++++...+ ..+|+.++++++++|++.+....+...... +. ........++++++
T Consensus 148 G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~adi 227 (470)
T PLN02341 148 GKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISKLSAEAKMAIRQSKA 227 (470)
T ss_pred HHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchhhhhcccHHHHhhhhcCCE
Confidence 9999999999999999887665 357999999999888876543211111100 00 00111346889999
Q ss_pred EEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC-CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC
Q 018696 158 FHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL-PLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN 236 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~-~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~ 236 (351)
+|++++.. .+.+.+.+..+++.+++.|.++++||+.+. .+|...+...+.+.++++++|++++|++|++.+++..+.
T Consensus 228 v~lsg~~~-~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~~l~g~~~~- 305 (470)
T PLN02341 228 LFCNGYVF-DELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAEALTGIRNP- 305 (470)
T ss_pred EEEeceeC-CcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCCH-
Confidence 99998753 234567888999999999999999998764 344444455667888999999999999999999986432
Q ss_pred hhHHHHHHHhcCC--CeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHH
Q 018696 237 DDNVVLEKLFHPN--LKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREA 314 (351)
Q Consensus 237 ~~~~~~~~l~~~g--~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a 314 (351)
.+.++.+.+.| .+.||||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|++ +++|
T Consensus 306 --~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl~gll~G~~-------l~ea 376 (470)
T PLN02341 306 --ILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALGYIHNLP-------LVNT 376 (470)
T ss_pred --HHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHHHHHHcCCC-------HHHH
Confidence 33567777766 579999999999999999888999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhHHhcccCCCCCCCCHHHHHHHHhhhc
Q 018696 315 LLFANACGALTVTERGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 315 ~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~~~~ 349 (351)
+++|+++|+++++..|+...+|+.++++++|++..
T Consensus 377 l~~A~a~aA~~v~~~Ga~~~~p~~~ev~~~l~~~~ 411 (470)
T PLN02341 377 LTLANAVGAATAMGCGAGRNVATLEKVLELLRASN 411 (470)
T ss_pred HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHHhcC
Confidence 99999999999999999989999999999997543
|
|
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-45 Score=329.49 Aligned_cols=292 Identities=39% Similarity=0.569 Sum_probs=249.5
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+|+|++++|++...++.. .........+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+
T Consensus 1 ~i~~iG~~~iD~~~~~~~~~-~~~~~~~~~~GG~~~N~a~~la~lg~~~~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~ 79 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGGRL-EQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRV 79 (294)
T ss_pred CeEEechhheeeecCCCCcc-chhhccccccCChHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence 48999999999998766433 34556788999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEcccccc-CchhHHHHHHHHHHHHHcCCeE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~v 188 (351)
.++.+|+.+++.++.+|+|++.+++...+...++.++++...+++++++|+++.... .+...+.+.++++.+++.+.++
T Consensus 80 ~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T cd01166 80 DPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADHLHLSGITLALSESAREALLEALEAAKARGVTV 159 (294)
T ss_pred eCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCEEEEcCcchhhCHHHHHHHHHHHHHHHHcCCEE
Confidence 889999999999888888888877655555567777776667899999999886432 2222477888999999999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecC
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 268 (351)
++||+....+| +.+...+.+..+++++|++++|+.|++.+++....++..+.++++ +.|++.|+||.|++|++++.++
T Consensus 160 ~~D~~~~~~~~-~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~l-~~g~~~viit~G~~G~~~~~~~ 237 (294)
T cd01166 160 SFDLNYRPKLW-SAEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALAL-ALGVKAVVVKLGAEGALVYTGG 237 (294)
T ss_pred EECCCCcchhc-ChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchhHHHHHHhh-cCCccEEEEEEcCCceEEEECC
Confidence 99998655443 334455667788999999999999999999876544444455566 7899999999999999999888
Q ss_pred ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 269 ~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
+.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 238 ~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 238 GRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRPGD 293 (294)
T ss_pred ceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999999999999999999 999999999999999999985
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=331.06 Aligned_cols=287 Identities=53% Similarity=0.878 Sum_probs=246.2
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+|+|++++|++...+.. +......+||++.|+|.++++||.+|.++|.+|+|.+|+.+++.|++.||++.++.+
T Consensus 1 ~ilviG~~~~D~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~ 76 (295)
T cd01167 1 KVVCFGEALIDFIPEGSGA----PETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQF 76 (295)
T ss_pred CEEEEcceeEEEecCCCCC----CccccccCCCcHHHHHHHHHhcCCCeEEEEeecCcHHHHHHHHHHHHcCCCchheee
Confidence 5899999999999876543 445678999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
.++.+|++++++++.+|+|++.+++..........+ +..+.+++++++|++++.+.++...+...++++.+++.+.+++
T Consensus 77 ~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 155 (295)
T cd01167 77 DPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTE-LNPDLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLIS 155 (295)
T ss_pred cCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCcc-CChhHhccCCEEEEechhhccchHHHHHHHHHHHHHHcCCEEE
Confidence 888899999999988898888876433322112221 3456788999999988655555556778889999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCc
Q 018696 190 YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269 (351)
Q Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 269 (351)
+||+.+..+|.......+.+.++++++|++++|++|+..+++....+ ..++.+.+.|++.+|||+|++|++++.+++
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~~---~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 232 (295)
T cd01167 156 FDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDPE---EIAALLLLFGLKLVLVTRGADGALLYTKGG 232 (295)
T ss_pred EcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCCHH---HHHHHHhhcCCCEEEEecCCcceEEEECCc
Confidence 99987766666555567778889999999999999999998865433 245678889999999999999999999888
Q ss_pred eeeecCcccccccCCCCchHHHHHHHHHHHhcC-------CcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQ-------NLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 270 ~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~-------~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
.+++|+++++++|||||||+|+|||+++|++|+ + +++|+++|+++|+.++++.|+
T Consensus 233 ~~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~-------~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 233 VGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDE-------LAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred ceeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHH-------HHHHHHHHHHhhHHHhcccCC
Confidence 899999999999999999999999999999999 8 999999999999999999885
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=320.47 Aligned_cols=314 Identities=56% Similarity=0.881 Sum_probs=280.0
Q ss_pred CCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
.++.|+++|++.+|++...++.|.. .+..+...+||++.|+|.+++|||.++.++|.||+|.+|+.+.+.|++.||
T Consensus 8 ~~~~vv~fGs~~~D~V~~~~~~p~~ge~~~~~~f~~~~GG~~aN~AvaaarLG~~~afiGkvGdD~fG~~l~~~L~~~~V 87 (330)
T KOG2855|consen 8 EPPLVVVFGSMLIDFVPSTRRLPNAGETWEPPGFKTAPGGKGANQAVAAARLGGRVAFIGKVGDDEFGDDLLDILKQNGV 87 (330)
T ss_pred CCceEEEeccceeeeeeccccCCCccccccCCcceecCCCcchhhhhHHHhcCcceeeeecccchhhHHHHHHHHhhCCc
Confidence 5667999999999999999999887 788999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 182 (351)
+++++....+.+|+..++.+..+|++.+.+++++..+......++..+.++.+.++|+..-..............++.++
T Consensus 88 ~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~ak~~~~q~ei~~~~~~~s~~~~~~~~~~ 167 (330)
T KOG2855|consen 88 DTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKEAKVFHCQSEILIEEPMRSLHIAAVKVAK 167 (330)
T ss_pred ccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhhccEEEEeeecCCcchhHHHHHhhhhhhh
Confidence 99999999999999999999999999999997777776666667778899999999998877776666666666677888
Q ss_pred HcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcce
Q 018696 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGC 262 (351)
Q Consensus 183 ~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 262 (351)
+.+..+.+||+.+.++|...+..+..+..++..+|++..+.+|+..++|..+. + .. +|+..+.+.||||+|++|+
T Consensus 168 ~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~~-~---~~-~L~~~~~k~viVTlG~kG~ 242 (330)
T KOG2855|consen 168 NAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIEDD-K---IL-KLWHMKLKLVIVTLGEKGC 242 (330)
T ss_pred cccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCccc-h---HH-HHhccCCCEEEEEeCCCce
Confidence 88888999999999999988777777888999999999999999999988322 2 23 7888888999999999999
Q ss_pred EEEecCcee-eecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 263 RYYTKEFKG-RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 263 ~~~~~~~~~-~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
.+++++..- ++|++.+++||||||||+|.|||+..|.+| ++.- ...+++++++|++|+++++++.|+.+.+|..+++
T Consensus 243 ~y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~-~~~~-~~~L~~~l~~A~a~~ai~v~~~Ga~~s~p~~~~~ 320 (330)
T KOG2855|consen 243 RYYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRG-SLLP-ELSLEEALRFANACGAITVQRKGAIPSMPTEKEV 320 (330)
T ss_pred EEEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhc-cccc-hHHHHHHHHHHHHhhhHHhhccCCCccCccHHHH
Confidence 999988544 999999999999999999999999999999 3221 4558999999999999999999999999999999
Q ss_pred HHHHhh
Q 018696 342 LKLLHT 347 (351)
Q Consensus 342 ~~~l~~ 347 (351)
++.+..
T Consensus 321 ~~~~~~ 326 (330)
T KOG2855|consen 321 QSLLKS 326 (330)
T ss_pred HHHhhh
Confidence 998764
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=330.11 Aligned_cols=288 Identities=27% Similarity=0.369 Sum_probs=245.0
Q ss_pred ceEEEEccceeecccCCCCCCCC------C----C-----------CCccccCCChHHHHHHHHHHcCCCeEEEeecCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA------E----A-----------PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDD 87 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~------~----~-----------~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D 87 (351)
.+|+++|++++|++..++..|.. . + ......+||++.|+|.+|++||.++.++|.+|+|
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D 81 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIRGAAALGGSAAFIGRVGDD 81 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHHhcCccccCCCHHHHHHHHHHHhcCCeEEEEEeccC
Confidence 36999999999999998877622 0 1 1357899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccC
Q 018696 88 EFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIA 167 (351)
Q Consensus 88 ~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 167 (351)
.+|+.+++.|+++||+++++... +.+|+.++++++++|+|.+..+ ++++..++.+++....+++++++|++++....
T Consensus 82 ~~g~~i~~~l~~~GV~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~ 158 (312)
T cd01168 82 KLGDFLLKDLRAAGVDTRYQVQP-DGPTGTCAVLVTPDAERTMCTY--LGAANELSPDDLDWSLLAKAKYLYLEGYLLTV 158 (312)
T ss_pred hhHHHHHHHHHHCCCccccccCC-CCCceEEEEEEcCCCceeeecc--cchhhcCChhHCCHHHHccCCEEEEEEEecCC
Confidence 99999999999999999988754 5799999999988899987665 56666688888877789999999998864322
Q ss_pred chhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhc
Q 018696 168 EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~ 247 (351)
+ .+....+++.+++.|.++++||+... .....++.+.++++++|++++|++|++.+++.. .+...+.++++.+
T Consensus 159 ~--~~~~~~~~~~a~~~g~~v~~d~~~~~----~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~-~~~~~~~a~~l~~ 231 (312)
T cd01168 159 P--PEAILLAAEHAKENGVKIALNLSAPF----IVQRFKEALLELLPYVDILFGNEEEAEALAEAE-TTDDLEAALKLLA 231 (312)
T ss_pred C--HHHHHHHHHHHHHcCCEEEEeCCcHH----HHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCCC-CCChHHHHHHHHh
Confidence 2 27888899999999999999996311 112345567888999999999999999999852 1233446788889
Q ss_pred CCCeEEEEeeCCcceEEEecCceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHh
Q 018696 248 PNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTV 326 (351)
Q Consensus 248 ~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i 326 (351)
.|++.||||+|++|++++.+++.+++|+++ ++++|||||||+|+|||++++++|++ +++|+++|+++|++++
T Consensus 232 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~-------~~~a~~~a~~~Aa~~v 304 (312)
T cd01168 232 LRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP-------LEECIRLGSYAAAEVI 304 (312)
T ss_pred cCCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999998 89999999999999999999999999 9999999999999999
Q ss_pred cccCCCC
Q 018696 327 TERGAIP 333 (351)
Q Consensus 327 ~~~g~~~ 333 (351)
++.|+.+
T Consensus 305 ~~~G~~~ 311 (312)
T cd01168 305 QQLGPRL 311 (312)
T ss_pred hccCCCC
Confidence 9999753
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=325.89 Aligned_cols=302 Identities=39% Similarity=0.582 Sum_probs=260.7
Q ss_pred eEEEEccceeecccC-CCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 30 LVVCFGEMLIDFVPT-VGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~-~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|+++|++++|++.. .+..|.. .....+..+||++.|+|+++++||.++.++|.+|+|.+|+.+++.|++.|||+
T Consensus 1 ~v~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~lG~~~~~~~~vG~D~~g~~~~~~l~~~GVd~ 80 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGAVGDDDFGEFLLEELRKEGVDT 80 (311)
T ss_pred CEEEECchhhheehhhccCCCCCcccccccceeecCCchHHHHHHHHHHcCCceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence 389999999999996 4434332 12246789999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHc
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 184 (351)
+++......+|+.+.+.++.+|+|.+.+++.. +...++++.+++..+..++++|++++.+.... +....+++.+++.
T Consensus 81 ~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~a~~~ 157 (311)
T COG0524 81 SHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPEDLDEDELAGADVLHISGIQLEIPP--EALLAALELAKAA 157 (311)
T ss_pred ceEEEcCCCcceEEEEEEcCCCceeEEEECCc-ccccCChHHcChHHHhhcCeeeEEEeecCCCh--HHHHHHHHHHHHc
Confidence 99999888899999999998999999998554 56667888776677889999999987654332 7889999999999
Q ss_pred CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
+.++++|++++...|. .+.+.++++++|++++|++|++.+++. . ++.....+.+...|++.+|+|+|++|+++
T Consensus 158 g~~v~~d~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~-~-~~~~~~~~~~~~~~~~~vvvt~G~~Ga~~ 230 (311)
T COG0524 158 GVTVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLTGL-E-EDAEAAAALLLAKGVKTVVVTLGAEGAVV 230 (311)
T ss_pred CCeEEEecCCCccccc-----hhhHHHHHhhCCEEeCCHHHHHHHhCC-C-ccHHHHHHHHhhcCCCEEEEEeCCCcEEE
Confidence 9999999999887764 567788899999999999999999987 2 22222336778899999999999999999
Q ss_pred EecCc---eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 265 YTKEF---KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 265 ~~~~~---~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++. ....++++++++|||||||+|.|||++++++|++ +++|+++|+++|++++++.|+...+|+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-------~~~a~~~a~a~aa~~~~~~g~~~~~p~~~~~ 303 (311)
T COG0524 231 FTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAALAVTRPGARPSLPTREEV 303 (311)
T ss_pred EeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccCCCCCCCCCHHHH
Confidence 98854 3334467789999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhhh
Q 018696 342 LKLLHTV 348 (351)
Q Consensus 342 ~~~l~~~ 348 (351)
+.++++.
T Consensus 304 ~~~~~~~ 310 (311)
T COG0524 304 EAFLEEL 310 (311)
T ss_pred HHHHhcc
Confidence 9998764
|
|
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=324.10 Aligned_cols=284 Identities=34% Similarity=0.475 Sum_probs=243.5
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|.+++|++...+..|.. .......++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++
T Consensus 1 ~il~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 80 (292)
T cd01174 1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80 (292)
T ss_pred CEEEEeeceeEEEEEecCCCCCCCcEEeccceecCCCcHHHHHHHHHHcCCceEEEEEEcCCccHHHHHHHHHHcCCCce
Confidence 4899999999999987765543 344668899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++...++.+|++++++++.+|++++..+ .++...++++.+.. ..++.++++++++. .+.+.+..+++.+++
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a~~ 153 (292)
T cd01174 81 YVEVVVGAPTGTAVITVDESGENRIVVV--PGANGELTPADVDAALELIAAADVLLLQLE-----IPLETVLAALRAARR 153 (292)
T ss_pred EEEEcCCCCceeEEEEEcCCCceEEEEe--CCCCCCCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHHHHHh
Confidence 9988888899999999988899988876 34444555555543 45789999988652 245677889999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.++++||..... ...++++++|++++|++|++.+++....+ +..++++.+.+.|++.|++|.|++|
T Consensus 154 ~g~~v~~D~~~~~~----------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 223 (292)
T cd01174 154 AGVTVILNPAPARP----------LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKG 223 (292)
T ss_pred cCCEEEEeCCCcCc----------CcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 99999999974322 12567889999999999999999876543 3345678888899999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
++++++++.+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+.+++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~ 292 (292)
T cd01174 224 ALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAAALSVTRPGAQPSIPT 292 (292)
T ss_pred eEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCCCCCCC
Confidence 999988888899999999999999999999999999999999 999999999999999999999888764
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=321.13 Aligned_cols=298 Identities=18% Similarity=0.232 Sum_probs=242.7
Q ss_pred CCceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++++|+++|++++|++...+..+.. .....+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 3 ~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~ig~vG~D~~g~~i~~~l~~~gVd 82 (313)
T PRK09850 3 EKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVY 82 (313)
T ss_pred CCCcEEEECcEEEeeeccCCCcCcCCCCCceEEEEeCCcHHHHHHHHHHHcCCCeEEEEEecCchhHHHHHHHHHHcCCC
Confidence 4568999999999999875443221 2345778899999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++...++.+|++++++++++|++.+.++ .++....++.+.+. .+.+++++++++++. .+.+.+..+++.+
T Consensus 83 ~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~~ 156 (313)
T PRK09850 83 VDKCLIVPGENTSSYLSLLDNTGEMLVAIN-DMNISNAITAEYLAQHREFIQRAKVIVADCN-----ISEEALAWILDNA 156 (313)
T ss_pred chheeecCCCCceEEEEEecCCCCEEEEec-CchHhhhCCHHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHHHHhc
Confidence 999888888899999999998898887654 23444445554443 245788999887652 1334555555533
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
.+.++++||+.. |. ...+.++++++|++++|++|+..+++.... ++...+++.+.+.|++.+|||+|+
T Consensus 157 --~g~~v~~D~~~~---~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~ 226 (313)
T PRK09850 157 --ANVPVFVDPVSA---WK-----CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGG 226 (313)
T ss_pred --cCCCEEEEcCCH---HH-----HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 578999998731 11 134567788999999999999999885432 234456777888999999999999
Q ss_pred cceEEEecC-ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~-~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++.++ +..++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.++++.+.....|+.
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-------~~eal~~a~a~aa~~~~~~~~~~~~~~~ 299 (313)
T PRK09850 227 DGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-------FAESVRFAQGCSSMALSCEYTNNPDLSI 299 (313)
T ss_pred ceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCcccCH
Confidence 999998753 56678888899999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 018696 339 EAALKLLHT 347 (351)
Q Consensus 339 ~~v~~~l~~ 347 (351)
++|++++++
T Consensus 300 ~~~~~~~~~ 308 (313)
T PRK09850 300 ANVISLVEN 308 (313)
T ss_pred HHHHHHHHH
Confidence 999998874
|
|
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=317.82 Aligned_cols=283 Identities=24% Similarity=0.337 Sum_probs=233.7
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|++++|++..++..|.. ....+...+|| +.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 1 ~i~~iG~~~~D~i~~~~~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 79 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGG-GFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGIEIL 79 (289)
T ss_pred CeEEEcceeEEEEeecccCCCCCCccccceeeeccCc-HHHHHHHHHHcCCCeEEEEEecCChHHHHHHHHHHHcCCccc
Confidence 4899999999999988876543 34567899999 999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCch-hHHHHHHHHHHHHHc
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEP-CRSTQLAAMNLAKES 184 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~ 184 (351)
++... +.+|+.++++++.+|+|++..+. +.+..++++.++...+.+++++|++++.+.... ..+.+.++++..+ .
T Consensus 80 ~~~~~-~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 155 (289)
T cd01944 80 LPPRG-GDDGGCLVALVEPDGERSFISIS--GAEQDWSTEWFATLTVAPYDYVYLSGYTLASENASKVILLEWLEALP-A 155 (289)
T ss_pred ccccc-CCCCeEEEEEEcCCCceEEEEeC--CccCCCCHHHhccccCCCCCEEEEeCccccCcchhHHHHHHHHHhcc-C
Confidence 88765 56788887888888999887763 344456655554445788999999987553322 4556666666643 5
Q ss_pred CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
+.++++|++.+...|. .+.+.++++++|++++|++|++.+++....+. ...++++.+.+++.|+||+|++|+++
T Consensus 156 ~~~v~~D~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~-~~~~~~~~~~~~~~vvvt~G~~Ga~~ 229 (289)
T cd01944 156 GTTLVFDPGPRISDIP-----DTILQALMAKRPIWSCNREEAAIFAERGDPAA-EASALRIYAKTAAPVVVRLGSNGAWI 229 (289)
T ss_pred CCEEEEcCcccccccC-----HHHHHHHHhcCCEEccCHHHHHHHhCCCCcch-HHHHHHHHhccCCeEEEEECCCcEEE
Confidence 7899999987655442 34677888999999999999999999654432 23467788889999999999999999
Q ss_pred Ee-cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccC
Q 018696 265 YT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 330 (351)
Q Consensus 265 ~~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g 330 (351)
+. +++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|
T Consensus 230 ~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-------~~~a~~~a~a~aa~~~~~~G 289 (289)
T cd01944 230 RLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289 (289)
T ss_pred EecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCC
Confidence 88 4566788989999999999999999999999999999 99999999999999999875
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=313.02 Aligned_cols=279 Identities=28% Similarity=0.361 Sum_probs=234.7
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|.+++|++...+..|.. +...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++
T Consensus 1 ~i~~iG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gI~~~ 80 (284)
T cd01945 1 RVLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTS 80 (284)
T ss_pred CEEEECcceeEEEEEeccCCCCCCeEEEeEEEEecCCHHHHHHHHHHHcCCCeEEEEEecCchHHHHHHHHHHHcCCCcc
Confidence 5899999999999988776543 345678999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
++...++.+|+.+++ ...++++....+. .....+..++++...+++++++|+++.. .+...++++.+++.|
T Consensus 81 ~~~~~~~~~t~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~i~~~~------~~~~~~~~~~~~~~g 151 (284)
T cd01945 81 FIVVAPGARSPISSI-TDITGDRATISIT--AIDTQAAPDSLPDAILGGADAVLVDGRQ------PEAALHLAQEARARG 151 (284)
T ss_pred ceeecCCCCCccEEE-EccCCCceEEEec--CCCCCCCcccCCHHHhCcCCEEEEcCCC------HHHHHHHHHHHHHcC
Confidence 999888878888876 4456766666553 3333455666666668999999998752 356778899999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++|+..... .. +.++++++|++++|++|++.+++.... ++++.+.+.|++.||||+|++|++++
T Consensus 152 ~~v~~~~~~~~~--------~~-~~~~~~~~dil~~n~~e~~~l~~~~~~----~~~~~l~~~~~~~vivt~G~~G~~~~ 218 (284)
T cd01945 152 IPIPLDLDGGGL--------RV-LEELLPLADHAICSENFLRPNTGSADD----EALELLASLGIPFVAVTLGEAGCLWL 218 (284)
T ss_pred CCeeEeccCCcc--------cc-hHHHhccCCEEEeChhHHhhhcCCCHH----HHHHHHHhcCCcEEEEEECCCCeEEE
Confidence 877776643211 12 567888999999999999999876432 46677888999999999999999999
Q ss_pred e-cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 266 T-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 266 ~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
. +++.+++|+++++++||+||||+|.|||++++++|++ +++|+++|+++|++++++.|+..++|+
T Consensus 219 ~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~ 284 (284)
T cd01945 219 ERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASAAAALKCRGLGGRAGLPT 284 (284)
T ss_pred cCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcccCCC
Confidence 8 6678899999999999999999999999999999999 999999999999999999999877764
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-43 Score=322.03 Aligned_cols=290 Identities=21% Similarity=0.279 Sum_probs=236.0
Q ss_pred CCCceEEEEccceeecccCCCC------CCCC------------------CCCCccccCCChHHHHHHHHHHcC---C-C
Q 018696 26 AYDRLVVCFGEMLIDFVPTVGG------VSLA------------------EAPAFKKAPGGAPANVAVGISRLG---G-S 77 (351)
Q Consensus 26 ~~~~~i~v~G~~~iD~~~~~~~------~~~~------------------~~~~~~~~~GG~~~n~a~~l~~lG---~-~ 77 (351)
+++++|+++|++++|++..++. .|.. ........+||++.|+|+++++|| . +
T Consensus 3 ~~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~ 82 (345)
T PTZ00247 3 SAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGF 82 (345)
T ss_pred CCCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCc
Confidence 3567899999999999998874 1221 012347889999999999999875 5 9
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhc
Q 018696 78 SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIK 153 (351)
Q Consensus 78 v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~ 153 (351)
|.++|.+|+|.+|+.+++.|++.||+++++. .++.+|++++++++. ++|++..+ ++++..+++++++. +.++
T Consensus 83 v~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~-~~~~~Tg~~~i~v~~-~~r~~~~~--~ga~~~l~~~~i~~~~~~~~l~ 158 (345)
T PTZ00247 83 VCYVGCVGDDRFAEILKEAAEKDGVEMLFEY-TTKAPTGTCAVLVCG-KERSLVAN--LGAANHLSAEHMQSHAVQEAIK 158 (345)
T ss_pred EEEEEEeccchhHHHHHHHHHHcCCeeeccc-cCCCCcEEEEEEEcC-CCcccccC--cchhhcCChHHcCcHHHHHHHh
Confidence 9999999999999999999999999998875 667799999998864 78877654 56667788877764 2688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 233 (351)
+++++|+++..+. .+.+.+..+++.++++++++++|++... + .+...+.+.++++++|++++|++|++.+++..
T Consensus 159 ~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~~--~--~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~ 232 (345)
T PTZ00247 159 TAQLYYLEGFFLT--VSPNNVLQVAKHARESGKLFCLNLSAPF--I--SQFFFERLLQVLPYVDILFGNEEEAKTFAKAM 232 (345)
T ss_pred hCCEEEEEEEEec--ccHHHHHHHHHHHHHcCCEEEEECCcHH--H--HHHHHHHHHHHHhhCCEEEeCHHHHHHHhhcc
Confidence 9999999986432 2457888999999999999999975311 1 12334557888999999999999999999832
Q ss_pred --CCChhHHHHHHHhc------CCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 --DHNDDNVVLEKLFH------PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 --~~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..++++.+.+ .+++.||||+|++|++++.+++.+++|++++ +++|||||||+|.|||+++|++|+
T Consensus 233 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~ 312 (345)
T PTZ00247 233 KWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGK 312 (345)
T ss_pred CCCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCC
Confidence 11233445555543 3578999999999999999888888998887 599999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|++++++.|+.
T Consensus 313 ~-------~~~al~~a~~aAa~~v~~~Ga~ 335 (345)
T PTZ00247 313 D-------IDRCVEAGHYSAQVIIQHNGCT 335 (345)
T ss_pred C-------HHHHHHHHHHHHHHHHhccCCC
Confidence 9 9999999999999999999986
|
|
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=324.04 Aligned_cols=306 Identities=19% Similarity=0.236 Sum_probs=242.3
Q ss_pred CCCCceEEEEccceeecccCCCCCC-------CCC----------------C-CC--ccccCCChHHHHHHHHHHcC-CC
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGGVS-------LAE----------------A-PA--FKKAPGGAPANVAVGISRLG-GS 77 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~~~-------~~~----------------~-~~--~~~~~GG~~~n~a~~l~~lG-~~ 77 (351)
.+++.+|+.+|++.+|+...++... +.. . .. ....+||++.|+|++|++|| .+
T Consensus 30 ~~~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~~~~~~~~GGsaaNtA~~lArLGG~~ 109 (434)
T PRK15074 30 ETSRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHEFAGGTIGNTLHNYSVLADDR 109 (434)
T ss_pred CCCCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHHcCCCC
Confidence 4678899999999999998765321 110 0 01 35679999999999999996 99
Q ss_pred eEEEeecCCC-hHHHHHHHHHH--HCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcC
Q 018696 78 SAFVGKLGDD-EFGYMLANILK--ENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQ 154 (351)
Q Consensus 78 v~~v~~vG~D-~~g~~i~~~l~--~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 154 (351)
+.++|.||+| .+|+++++.|+ +.||+++++...+ .+|+.++++++++|+|++..+ ++++..+++++++...+++
T Consensus 110 ~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~-~~TG~~~VlV~~dGeRt~~t~--~GA~~~Lt~edld~~~i~~ 186 (434)
T PRK15074 110 SVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVD-GPIGRCFTLISEDGERTFAIS--PGHMNQLRPESIPEDVIAG 186 (434)
T ss_pred eEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcC-CCCEEEEEEECCCCCEEEEEe--cChhhcCChhHCCHhHhcc
Confidence 9999999999 79999999997 6899999887554 589999999999999999887 5677788998888888999
Q ss_pred ccEEEEcccccc---CchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 155 GSIFHYGSISLI---AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 155 ~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
++++|++++.+. .+...+....+++.+++.|+++++|++.+...+...+.+ ...+++++|++++|++|+..+++
T Consensus 187 a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~---~e~l~~~vDILf~NeeEa~~LtG 263 (434)
T PRK15074 187 ASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWW---QEFLKEHVSILAMNEDEAEALTG 263 (434)
T ss_pred CCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHH---HHHHHhcCCEEEcCHHHHHHHhC
Confidence 999999997654 224467888999999999999999998654333222222 23455799999999999999998
Q ss_pred CCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCc-------e--------------------------------ee
Q 018696 232 GDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF-------K--------------------------------GR 272 (351)
Q Consensus 232 ~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------~--------------------------------~~ 272 (351)
..+.+ ++++.+.+ +++.||||+|++|++++..++ . .+
T Consensus 264 ~~d~e---ea~~~L~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
T PRK15074 264 ESDPL---LASDKALD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSH 339 (434)
T ss_pred CCCHH---HHHHHHHc-CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccccccc
Confidence 65333 35556654 478999999999999965221 1 27
Q ss_pred ecCc---ccccccCCCCchHHHHHHHHHHHhcC-Ccc------------cchHHHHHHHHHHHHHHhHHhcccCC--CCC
Q 018696 273 VPGV---KTKAVDTTGAGDSFVSGILNCLAADQ-NLI------------KDENRLREALLFANACGALTVTERGA--IPA 334 (351)
Q Consensus 273 v~~~---~~~~vd~tGaGD~f~ag~~~~l~~g~-~~~------------~~~~~~~~a~~~a~~~Aa~~i~~~g~--~~~ 334 (351)
+|++ ++++||||||||+|.|||+++|.+|+ +.. ....++.+|+++|+++|+..+++.|+ ...
T Consensus 340 ~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~~~~~ 419 (434)
T PRK15074 340 IAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPRLSRG 419 (434)
T ss_pred cCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCC
Confidence 8888 78999999999999999999999997 000 00012999999999999999999998 456
Q ss_pred CCCHHH
Q 018696 335 LPTKEA 340 (351)
Q Consensus 335 ~~~~~~ 340 (351)
+|+.++
T Consensus 420 ~p~~~~ 425 (434)
T PRK15074 420 LPERED 425 (434)
T ss_pred CCCccc
Confidence 776554
|
|
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=321.31 Aligned_cols=292 Identities=38% Similarity=0.578 Sum_probs=246.2
Q ss_pred ceEEEEccceeecccCCCCC--CCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGV--SLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~--~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
.+|+++|++++|++...+.. ...+......++||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||++++
T Consensus 2 ~~v~~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~LG~~v~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 81 (301)
T PF00294_consen 2 KKVLVIGEVNIDIIGYVDRFKGDLVRVSSVKRSPGGAGANVAIALARLGADVALIGKVGDDFFGEIILEELKERGVDTSY 81 (301)
T ss_dssp EEEEEESEEEEEEEEESSSHTTSEEEESEEEEEEESHHHHHHHHHHHTTSEEEEEEEEESSHHHHHHHHHHHHTTEEETT
T ss_pred CcEEEECccceEEEeecCCcCCcceecceEEEecCcHHHHHHHHHHhccCcceEEeeccCcchhhhhhhccccccccccc
Confidence 37999999999999988762 1115667889999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC-
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG- 185 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~- 185 (351)
+.+.++.+|+.++++++++|++++..+ +......+.+.+....+..++++|+++..+....+.+.+..+.+.+++.+
T Consensus 82 i~~~~~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (301)
T PF00294_consen 82 IPRDGDEPTGRCLIIVDPDGERTFVFS--PGANSDLTPDELDEEAIDEADILHLSGVSLPEGIPEDLLEALAKAAKKNGP 159 (301)
T ss_dssp EEEESSSEEEEEEEEEETTSEEEEEEE--EGGGGGGGHHHHHHHHHHTESEEEEESGHCSTTSHHHHHHHHHHHHHHTTE
T ss_pred cccccccccceeEeeecccccceeeec--cccccccccccccccccccccceeecccccccccccceeeecccccccccc
Confidence 998888999999999998899988876 44444465555556788999999999933344445566777777777776
Q ss_pred -CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhcCCCeEEEEeeCCcce
Q 018696 186 -SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFHPNLKLLIVTEGSKGC 262 (351)
Q Consensus 186 -~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 262 (351)
.+++.++. | ...++.+.++++++|++++|++|+..+++.. +.++....+++++..|++.+++|+|++|+
T Consensus 160 ~~~~~~~~~-----~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vivt~G~~G~ 231 (301)
T PF00294_consen 160 FDPVFRDPS-----W---DDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAALRELQARGVKIVIVTLGEDGA 231 (301)
T ss_dssp EEEEEEGGG-----S---HHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHHHHHHHHTTSSEEEEEEGGGEE
T ss_pred ccccccccc-----c---cccchhhhhhccccchhccccccccccccccccchhhhhccccccchhhhhhhhccccccCc
Confidence 35555543 1 1256788888899999999999999999988 44444555677777999999999999999
Q ss_pred EEEecCceeeecC-cccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 263 RYYTKEFKGRVPG-VKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 263 ~~~~~~~~~~v~~-~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
+++++++.+++++ ++++++|+|||||+|+|||++++++|++ +++|+++|+++|+.++++.|+...+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~l~~~~~-------~~~a~~~a~~~aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 232 LYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYGLLSGMS-------LEEALKFANAAAALKVQQPGPRSPLPT 300 (301)
T ss_dssp EEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHHHHTTHH-------HHHHHHHHHHHHHHHHTSSSSSGGTT-
T ss_pred ccccccccccccccccccccceeccchhhhHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCcCCCCC
Confidence 9999988999999 4689999999999999999999999998 999999999999999999999887776
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=316.23 Aligned_cols=302 Identities=28% Similarity=0.320 Sum_probs=242.6
Q ss_pred CCCCCCceEEEEc-cceeecccCCCCCC-------CC---------------C-----------CCCccccCCChHHHHH
Q 018696 23 GSGAYDRLVVCFG-EMLIDFVPTVGGVS-------LA---------------E-----------APAFKKAPGGAPANVA 68 (351)
Q Consensus 23 ~~~~~~~~i~v~G-~~~iD~~~~~~~~~-------~~---------------~-----------~~~~~~~~GG~~~n~a 68 (351)
+.+++|++|+.+| ++.+|+...++... +. . ....+.++||++.|++
T Consensus 14 ~~~~~~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a 93 (367)
T PLN02379 14 GDGPRPPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTI 93 (367)
T ss_pred CCCCCCCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHH
Confidence 4567789999999 99999998764221 10 0 1126678999999999
Q ss_pred HHHHH-cCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCcccc
Q 018696 69 VGISR-LGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESEL 147 (351)
Q Consensus 69 ~~l~~-lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i 147 (351)
++|++ ||.++.++|.+|+|.+|+++++.|++.||+++++... +.+|+.++++++++|+|++..+ .+....++.+++
T Consensus 94 ~~la~~LG~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~-~~~Tg~~~v~v~~dgert~~~~--lg~~~~l~~~~~ 170 (367)
T PLN02379 94 RGLSAGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAK-KGPTAQCVCLVDALGNRTMRPC--LSSAVKLQADEL 170 (367)
T ss_pred HHHHHhcCCCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccC-CCCCceEEEEECCCCCccccCC--ccccccCChhHC
Confidence 99986 9999999999999999999999999999999887554 4589999999998999887544 345556777777
Q ss_pred chhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHH
Q 018696 148 DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDE 225 (351)
Q Consensus 148 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E 225 (351)
..+.+++++++|++ +... ..+.+.++++.++++|+++++|++.... ...+++.+.++++ ++|++++|++|
T Consensus 171 ~~~~~~~~~~v~v~-~~~~---~~~~~~~~~~~A~~~g~~v~lD~s~~~~----v~~~r~~l~~ll~~~~vDilf~Ne~E 242 (367)
T PLN02379 171 TKEDFKGSKWLVLR-YGFY---NLEVIEAAIRLAKQEGLSVSLDLASFEM----VRNFRSPLLQLLESGKIDLCFANEDE 242 (367)
T ss_pred CHHHHhcCCEEEEE-cccC---CHHHHHHHHHHHHHcCCEEEEeccchhh----hhhhhHHHHHHhhcCCccEEEcCHHH
Confidence 77789999999998 3322 3578889999999999999999964211 1133455666664 89999999999
Q ss_pred HhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCc
Q 018696 226 ITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNL 304 (351)
Q Consensus 226 ~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~ 304 (351)
+..+++....+....+ .++++.+++.++||+|++|++++.+++.+++|+++ .+++|||||||+|.|||++++++|++
T Consensus 243 a~~l~~~~~~~~~~~~-~~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFaagfl~gl~~G~~- 320 (367)
T PLN02379 243 ARELLRGEQESDPEAA-LEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFASGFLYGLIKGLS- 320 (367)
T ss_pred HHHHhcCCCCCCHHHH-HHHHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHHHHHHHHHHCCCC-
Confidence 9999875432233323 34556688999999999999999988889999987 57999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 305 IKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 305 ~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+++|+++|+++|+.+|++.|++. +.++.+++++
T Consensus 321 ------l~~a~~~g~~aAa~vi~~~G~~~---~~~~~~~~~~ 353 (367)
T PLN02379 321 ------LEECCKVGACSGGSVVRALGGEV---TPENWQWMYK 353 (367)
T ss_pred ------HHHHHHHHHHHHHHHHhccCCCC---ChHHHHHHHH
Confidence 99999999999999999999764 5555555444
|
|
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=307.74 Aligned_cols=270 Identities=30% Similarity=0.421 Sum_probs=227.5
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|++++|+++.++..|.. ........+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++
T Consensus 1 ~v~~iG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 80 (279)
T cd01942 1 DVAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTS 80 (279)
T ss_pred CEEEEecceeeeEeecccCCCCCceEecceeeecCCcHHHHHHHHHHHcCCCceEEEEecCCcchHHHHHHHHHcCCCcc
Confidence 4899999999999988877653 355788999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
++...++.+|++++++++.++++.+..+ ++....+++++ ....+++++++|+++.. ...++++.+++.|
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g 149 (279)
T cd01942 81 HVRVVDEDSTGVAFILTDGDDNQIAYFY--PGAMDELEPND-EADPDGLADIVHLSSGP--------GLIELARELAAGG 149 (279)
T ss_pred ceEEcCCCCcceEEEEEcCCCCEEEEec--CCcccccccCC-chhhhcccCEEEeCCch--------HHHHHHHHHHHcC
Confidence 9987777889999998888887777654 44444455554 45568899999998752 3556777888889
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHH---hhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcce
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEI---TFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGC 262 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~---~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 262 (351)
.++++|++.....|. .+.+.++++++|++++|++|+ ..+++..... ...+++.||+|+|++|+
T Consensus 150 ~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~---------~~~~~~~vvvt~G~~G~ 215 (279)
T cd01942 150 ITVSFDPGQELPRLS-----GEELEEILERADILFVNDYEAELLKERTGLSEAE---------LASGVRVVVVTLGPKGA 215 (279)
T ss_pred CeEEEcchhhhhhcc-----HHHHHHHHhhCCEEecCHHHHHHHHhhcCCChHH---------HhcCCCEEEEEECCCce
Confidence 999999986544332 245677889999999999999 4555543211 12788999999999999
Q ss_pred EEEecCceeeecCc-ccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 263 RYYTKEFKGRVPGV-KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 263 ~~~~~~~~~~v~~~-~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
+++.+++.+++|++ +++++|||||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------l~~al~~a~~~Aa~~~~~~G~ 278 (279)
T cd01942 216 IVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAASLKVERRGA 278 (279)
T ss_pred EEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCC
Confidence 99998888999997 889999999999999999999999999 999999999999999999885
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=306.57 Aligned_cols=285 Identities=33% Similarity=0.460 Sum_probs=241.6
Q ss_pred ccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeec
Q 018696 35 GEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD 110 (351)
Q Consensus 35 G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~ 110 (351)
|.+++|++..+++.|.. ....+..++||++.|+|++|++||.++.+++.+|+|.+|+.+++.|++.||+++++...
T Consensus 1 G~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~ 80 (293)
T TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80 (293)
T ss_pred CCceEeEEEEeCCCCCCCCcEecCCceecCCCcHHHHHHHHHHCCCCEEEEEEecCCccHHHHHHHHHHcCCCeeEEEEc
Confidence 78899999988876644 35567899999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 111 STARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 111 ~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
++.+|++++++.+.+|++++..+ ++.+..+++++++ .+.+..+++++++. +.+.+.+..+++.+++++.++
T Consensus 81 ~~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v 153 (293)
T TIGR02152 81 KDTPTGTAFITVDDTGENRIVVV--AGANAELTPEDIDAAEALIAESDIVLLQL-----EIPLETVLEAAKIAKKHGVKV 153 (293)
T ss_pred CCCCCceEEEEEcCCCCEEEEEE--CCcCCcCCHHHHHHHHhhhccCCEEEEec-----CCCHHHHHHHHHHHHHcCCEE
Confidence 88899999999988888887765 3444556666655 24578899987653 234567788999999999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++|++.... ....++++++|++++|++|++.+++... .+.....++.+.+.|++.++||.|++|++++.
T Consensus 154 ~~D~~~~~~---------~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~~~~ 224 (293)
T TIGR02152 154 ILNPAPAIK---------DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVS 224 (293)
T ss_pred EEECCcCcc---------cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHHHcCCCeEEEEeCCCceEEEe
Confidence 999964321 1124678899999999999999988652 23444567888889999999999999999998
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHH
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~ 342 (351)
+++.+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+...+|+.++++
T Consensus 225 ~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~~~~~~ 293 (293)
T TIGR02152 225 KDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293 (293)
T ss_pred CCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCcccCCCChHHcC
Confidence 8888889998999999999999999999999999999 99999999999999999999987788887763
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=312.93 Aligned_cols=297 Identities=18% Similarity=0.214 Sum_probs=232.9
Q ss_pred CCceEEEEccceeecccCCC-CCCCC--CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVG-GVSLA--EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~-~~~~~--~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++..|+|+|++++|+++.++ ..|.. ........+||++.|+|.+|++||.+|.++|.+|+|.+|+++++.|++.||+
T Consensus 56 ~~~~v~viG~~~vD~~~~~~~~~p~~~~~~~~~~~~~GG~~~NvA~~larLG~~v~~ig~VG~D~~G~~i~~~l~~~GVd 135 (362)
T PRK09954 56 EQEYCVVVGAINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSAIGDDFYGETLLEETRRAGVN 135 (362)
T ss_pred CCccEEEEEEEEEEEEEeeCCcCcCCCCCCceEEEecCcHHHHHHHHHHHcCCCeEEEEEECCCHHHHHHHHHHHHcCCC
Confidence 34479999999999998765 33432 3456788899999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++...++.+|+.++++.+.++++. ..+.++.....++++.+.. ..+..+++++++.- .+.+.+..+++.+
T Consensus 136 ~~~~~~~~~~~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 209 (362)
T PRK09954 136 VSGCIRLHGQSTSTYLAIANRQDETV-LAINDTHILQQLTPQLLNGSRDLIRHAGVVLADCN-----LTAEALEWVFTLA 209 (362)
T ss_pred ccceEEcCCCCCeEEEEEEcCCCCEE-EEEcCchhhhcCCHHHHHHHHHHHhcCCEEEEECC-----CCHHHHHHHHHhC
Confidence 99998888888998888776655544 4443333444555554432 34677888877542 2234455555544
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
+++++++|+.... ....+.++++++|++++|++|++.+++.... ++..++++.+.+.|++.||||+|+
T Consensus 210 --~~~~v~~D~~~~~--------~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~G~ 279 (362)
T PRK09954 210 --DEIPVFVDTVSEF--------KAGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFVYLPD 279 (362)
T ss_pred --CCCcEEEECCCHH--------HhhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999986311 1133567889999999999999999986433 233456778888999999999999
Q ss_pred cceEEEecC-ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~-~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++..+ +.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++.+........+.
T Consensus 280 ~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Ag~l~~l~~g~~-------~~eal~~a~a~Aal~~~s~~~~~~~~~~ 352 (362)
T PRK09954 280 ESVFCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYS-------FRDSARFAMACAAISRASGSLNNPTLSA 352 (362)
T ss_pred ccEEEEeCCCceEeccCCCcccccccchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcCCCcCCH
Confidence 999888754 46778888999999999999999999999999999 9999999999999997765544344688
Q ss_pred HHHHHHHh
Q 018696 339 EAALKLLH 346 (351)
Q Consensus 339 ~~v~~~l~ 346 (351)
+.++++++
T Consensus 353 ~~~~~~~~ 360 (362)
T PRK09954 353 DNALSLVP 360 (362)
T ss_pred HHHHHHhc
Confidence 98888774
|
|
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=296.62 Aligned_cols=260 Identities=26% Similarity=0.369 Sum_probs=218.1
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|..|+.+++.|++ ++++.
T Consensus 1 ~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~vG~D~~g~~i~~~l~~-~~~~~ 79 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELES-GGDKH 79 (265)
T ss_pred CEEEEeeeeEEEEEEecCCCCCCceeecccceeecCchHHHHHHHHHHcCCceEEEEEecCChHHHHHHHHHHh-cCCcc
Confidence 5899999999999988776554 355788999999999999999999999999999999999999999999 99988
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
.+... +..|+.++++++.+|+|++..+..+ . .++++...+++++++|+++.. ...++++.+++.+
T Consensus 80 ~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~a~~~~ 144 (265)
T cd01947 80 TVAWR-DKPTRKTLSFIDPNGERTITVPGER--L----EDDLKWPILDEGDGVFITAAA--------VDKEAIRKCRETK 144 (265)
T ss_pred eEEec-CCCCceEEEEECCCCcceEEecCCC--C----cccCCHhHhccCCEEEEeccc--------ccHHHHHHHHHhC
Confidence 77654 5589999998888898887654221 1 233445567899999998753 1235566677664
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.+++|+..+... ..+.++++++|++++|++|+..+++ ++.+.+.+++.++||+|++|++++
T Consensus 145 -~~~~d~~~~~~~--------~~~~~~~~~~d~~~~n~~e~~~l~~----------~~~~~~~~~~~viit~G~~Ga~~~ 205 (265)
T cd01947 145 -LVILQVTPRVRV--------DELNQALIPLDILIGSRLDPGELVV----------AEKIAGPFPRYLIVTEGELGAILY 205 (265)
T ss_pred -CeEeccCccccc--------hhHHHHhhhCCEEEeCHHHHHHhhh----------HHHHHhccCCEEEEEeCCCCeEEE
Confidence 577888654321 2457788999999999999998764 346777899999999999999999
Q ss_pred ecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 266 TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 266 ~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
.+++.+++|+++++++|+|||||+|.|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 206 ~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~v~~~G~ 264 (265)
T cd01947 206 PGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVSHFGP 264 (265)
T ss_pred ECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCC
Confidence 98888899999999999999999999999999999999 999999999999999999985
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=300.51 Aligned_cols=289 Identities=25% Similarity=0.289 Sum_probs=234.7
Q ss_pred EEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 33 CFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 33 v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+.-++.+|+++.+++.|.. .......++||++.|+|.+|++||.+|.++|.+|+| .|+.+++.|++.||+++++..
T Consensus 4 ~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~v~~is~vG~D-~g~~~~~~L~~~gId~~~~~~ 82 (304)
T TIGR03828 4 VTLNPAIDLTIELDGLTLGEVNRVESTRIDAGGKGINVSRVLKNLGVDVVALGFLGGF-TGDFIEALLREEGIKTDFVRV 82 (304)
T ss_pred EEcchHHeEEEEccccccCceeecccccccCCccHHHHHHHHHHcCCCeEEEEEecCc-hhHHHHHHHHHCCCcceEEEC
Confidence 4457889999998887732 355788999999999999999999999999999999 699999999999999998876
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
.+ .|++++++++.+|++....+ .+. .++.++++. +.+++++++|+++... ...+.+.+..+++.+++
T Consensus 83 ~~--~t~~~~~~~~~~g~~~~~~~--~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~-~~~~~~~~~~~~~~~~~ 155 (304)
T TIGR03828 83 PG--ETRINVKIKEPSGTETKLNG--PGP--EISEEELEALLEKLRAQLAEGDWLVLSGSLP-PGVPPDFYAELIALARE 155 (304)
T ss_pred CC--CCeeeEEEEeCCCCEEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCC-CCCCHHHHHHHHHHHHH
Confidence 53 46777777777787665543 222 244443321 2578999999987532 22345678889999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
.+.++++|++.. ... ..+...+|++++|+.|++.+++.... ++..+.++.+.+.|++.||||+|++|
T Consensus 156 ~~~~v~~D~~~~--------~~~---~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 224 (304)
T TIGR03828 156 KGAKVILDTSGE--------ALR---DGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARELLDLGAENVLISLGADG 224 (304)
T ss_pred cCCEEEEECChH--------HHH---HHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCC
Confidence 999999998631 111 22234689999999999999986532 33445677888899999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++.+++.+++|+++++++|+|||||+|.|||+++|++|++ +++|+++|+++|++++++.|+ .+|+.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-------~~~a~~~a~~~Aa~~~~~~G~--~~p~~~~~ 295 (304)
T TIGR03828 225 ALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-------LEEALRLAVAAGSAAAFSEGT--GLPDPEDI 295 (304)
T ss_pred cEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCC--CCCCHHHH
Confidence 999988878889998899999999999999999999999999 999999999999999999997 47899999
Q ss_pred HHHHhhhc
Q 018696 342 LKLLHTVA 349 (351)
Q Consensus 342 ~~~l~~~~ 349 (351)
++++.++.
T Consensus 296 ~~~~~~~~ 303 (304)
T TIGR03828 296 EELLPQVT 303 (304)
T ss_pred HHHHhccc
Confidence 99998774
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=293.05 Aligned_cols=263 Identities=28% Similarity=0.335 Sum_probs=215.8
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+|+|++++|++... ...++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++..
T Consensus 1 ~v~~iG~~~~D~~~~~----------~~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gI~~~~v~~ 70 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------GKMYPGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRV 70 (264)
T ss_pred CeEEEcceEEEEeccC----------ceecCCCcHHHHHHHHHHcCCCeeEEecccCchhHHHHHHHHHHcCCChhheEE
Confidence 5899999999999752 357899999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
.++ +|+.+++. ..+|+|.+..++. +......+.......+++++++|++++.. .+.+.++++.+++.+++++
T Consensus 71 ~~~-~t~~~~~~-~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~a~~~g~~v~ 142 (264)
T cd01940 71 KEG-ENAVADVE-LVDGDRIFGLSNK-GGVAREHPFEADLEYLSQFDLVHTGIYSH-----EGHLEKALQALVGAGALIS 142 (264)
T ss_pred cCC-CCceEEEE-ecCCceEEEeecC-CcHHhcccCcccHhHHhcCCEEEEccccc-----HHHHHHHHHHHHHcCCEEE
Confidence 654 78877744 5678888766532 22222222223345678999999987531 4577889999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCc
Q 018696 190 YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269 (351)
Q Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 269 (351)
+|++.+. . .+.+.++++++|++++|++|... ++..+.++.+.+.+++.+|||+|++|++++.+++
T Consensus 143 ~D~~~~~---~-----~~~~~~~~~~~d~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~vvvT~G~~G~~~~~~~~ 207 (264)
T cd01940 143 FDFSDRW---D-----DDYLQLVCPYVDFAFFSASDLSD-------EEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAV 207 (264)
T ss_pred EcCcccC---C-----HHHHHhhcccCCEEEechhhcCc-------chHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCe
Confidence 9998642 1 12356778999999999877531 2333456778889999999999999999999888
Q ss_pred eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 270 ~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
.+++|+++++++|||||||+|.|||++++++|++ ++++|+++|+++|++++++.|+
T Consensus 208 ~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~------~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 208 FYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGT------AIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred EEecCCcCCCCCCCCCchHHHHHHHHHHHHhCCc------hHHHHHHHHHHHHHHHhcccCC
Confidence 8899999999999999999999999999999974 2899999999999999999986
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=303.05 Aligned_cols=292 Identities=24% Similarity=0.285 Sum_probs=229.5
Q ss_pred CCceEEEEccceeecccC--CCCCCC------CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHH
Q 018696 27 YDRLVVCFGEMLIDFVPT--VGGVSL------AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILK 98 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~--~~~~~~------~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~ 98 (351)
+.++|+++|++++|++.. +++.+. .........+|| +.|+|.+|++||.+|.++|.+|+|.+|+++++.|+
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~ 84 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEREEDRLGG-AANVARNIASLGARVFLVGVVGDDEAGKRLEALLA 84 (315)
T ss_pred CCCcEEEECceeEeeeeeecccccCCCCCCceEEEEEEEecCcH-HHHHHHHHHhcCCceEEEEEEecchhHHHHHHHHH
Confidence 467899999999999876 333211 122345678999 69999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCcc----ccc--hhhhcCccEEEEccccccCchhHH
Q 018696 99 ENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES----ELD--KNLIKQGSIFHYGSISLIAEPCRS 172 (351)
Q Consensus 99 ~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~i~--~~~i~~~~~~~~~~~~~~~~~~~~ 172 (351)
+.||+++++...++.+|+.++++++.++ ..+... ......++.. .+. ...+++++++++++.. ....+.+
T Consensus 85 ~~gI~~~~~~~~~~~~t~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~~~~ 160 (315)
T TIGR02198 85 EEGIDTSGLIRDKDRPTTTKTRVLARNQ-QLLRVD--FEERDPINAELEARLLAAIREQLASADAVVLSDYA-KGVLTPR 160 (315)
T ss_pred HCCCCcceEEECCCCCcceEEEEEcCCe-EEEEec--CCCCCCCCHHHHHHHHHHHHhhhhhCCEEEEecCC-CCccCHH
Confidence 9999999998888889999988877532 222211 2111112211 111 2457899999998753 2233457
Q ss_pred HHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC-CChhHHHHHHHh-cCCC
Q 018696 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD-HNDDNVVLEKLF-HPNL 250 (351)
Q Consensus 173 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~~l~-~~g~ 250 (351)
.+..+++.+++.++++++||+... ...++++|++++|++|++.+++... .++..+.++.+. +.|+
T Consensus 161 ~~~~~~~~a~~~g~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~l~~~~g~ 227 (315)
T TIGR02198 161 VVQEVIAAARKHGKPVLVDPKGKD-------------FSRYRGATLITPNRKEAEAAVGACDTEAELVQAAEKLLEELDL 227 (315)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcc-------------hhhcCCCcEECCCHHHHHHHhCCCCCHHHHHHHHHHHHHHcCC
Confidence 788899999999999999997431 1246789999999999999998422 223334455555 4789
Q ss_pred eEEEEeeCCcceEEEec-CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 251 KLLIVTEGSKGCRYYTK-EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 251 ~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+.||||.|++|++++.+ ++.+++|+++++++||+||||+|.|||++++++|++ +++|+++|+++|++++++.
T Consensus 228 ~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~-------~~~al~~A~~~aa~~~~~~ 300 (315)
T TIGR02198 228 EALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS-------LEEACRLANAAAGVVVGKL 300 (315)
T ss_pred CEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccC
Confidence 99999999999999884 567889999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHH
Q 018696 330 GAIPALPTKEAALKLL 345 (351)
Q Consensus 330 g~~~~~~~~~~v~~~l 345 (351)
|+.+ ++++++++.|
T Consensus 301 G~~~--~~~~~~~~~~ 314 (315)
T TIGR02198 301 GTAT--VSPAELANAL 314 (315)
T ss_pred CCCC--CCHHHHHHHh
Confidence 9864 6899998765
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=297.98 Aligned_cols=292 Identities=20% Similarity=0.243 Sum_probs=233.3
Q ss_pred eEEEEccceeecccCCCCCCCCC---CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
-+.+..++.+|+++..+..+... .......+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++ ||++++
T Consensus 2 ~~~~t~np~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vGd-~~G~~i~~~l~~-gI~~~~ 79 (309)
T PRK13508 2 ILTVTLNPSIDISYPLDELKLDTVNRVVDVSKTAGGKGLNVTRVLSEFGENVLATGLIGG-ELGQFIAEHLDD-QIKHAF 79 (309)
T ss_pred EEEEecChHHeEEEEeCCeeeCCeEEecceeecCCchHHHHHHHHHHcCCCeEEEEEecC-hhHHHHHHHHHc-CCCceE
Confidence 47788999999999988876542 4467899999999999999999999999999996 589999999999 999987
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+.. ++ .|++++++++ +|++++... +++. ++.+... ...+.+++++|+++... .....+....+++.
T Consensus 80 ~~~-~~-~t~~~~~~~~-~g~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~ 151 (309)
T PRK13508 80 YKI-KG-ETRNCIAILH-EGQQTEILE--KGPE--ISVQEADGFLHHFKQLLESVEVVAISGSLP-AGLPVDYYAQLIEL 151 (309)
T ss_pred EEC-CC-CCeeeEEEEe-CCCEEEEEC--CCCC--CCHHHHHHHHHHHHHhccCCCEEEEeCCCC-CCcCHHHHHHHHHH
Confidence 654 33 5677766665 677777654 2322 3332211 23578999999988542 22234667888899
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC---ChhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH---NDDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++.|+++++|++.. . ...+...+.++|++++|++|++.+++.... ++..+.++++...|++.|+||+
T Consensus 152 a~~~g~~v~~D~~~~--------~-~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~vvvT~ 222 (309)
T PRK13508 152 ANQAGKPVVLDCSGA--------A-LQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQQPLFEGIEWIIVSL 222 (309)
T ss_pred HHHCCCEEEEECCcH--------H-HHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 999999999998621 1 122333356899999999999999986432 2233445566678999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.+. +..+
T Consensus 223 G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-------~~~al~~a~a~aa~~~~~~~~--~~~~ 293 (309)
T PRK13508 223 GADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-------DADLLKKANVLGMLNAQEKQT--GHVN 293 (309)
T ss_pred CCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCc--CCCC
Confidence 9999999888888889999999999999999999999999999999 999999999999999999987 4578
Q ss_pred HHHHHHHHhhhc
Q 018696 338 KEAALKLLHTVA 349 (351)
Q Consensus 338 ~~~v~~~l~~~~ 349 (351)
++++++++++++
T Consensus 294 ~~~~~~~~~~i~ 305 (309)
T PRK13508 294 MANYDELYNQIE 305 (309)
T ss_pred HHHHHHHHhceE
Confidence 999999998875
|
|
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=295.51 Aligned_cols=274 Identities=22% Similarity=0.249 Sum_probs=218.0
Q ss_pred EEEEccceeecccCCCCCCCCC----CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 31 VVCFGEMLIDFVPTVGGVSLAE----APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
|+++|++++|+++.++..|... .......+||++.|+|.+|++||.++.++|.+|+|++|+.+++.|++.||++++
T Consensus 2 v~~iG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~lG~~~~~~~~vG~D~~g~~~~~~l~~~gId~~~ 81 (290)
T cd01939 2 VLCVGLTVLDFITTVDKYPFEDSDQRTTNGRWQRGGNASNSCTVLRLLGLSCEFLGVLSRGPVFESLLDDFQSRGIDISH 81 (290)
T ss_pred EEEEeeeeeEEEeeecCCCCCCcceEeeeeeEecCCCHHHHHHHHHHcCCceEEEEeecCCHHHHHHHHHHHHcCCceee
Confidence 8999999999999988876542 334578899999999999999999999999999999999999999999999998
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC-
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG- 185 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~- 185 (351)
+...++..++.++++++++|+|.+..+. .....++.++++...+++++++|+++... +...++++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~ 153 (290)
T cd01939 82 CYRKDIDEPASSYIIRSRAGGRTTIVND--NNLPEVTYDDFSKIDLTQYGWIHFEGRNP------DETLRMMQHIEEHNN 153 (290)
T ss_pred eeEcCCCCCeeEEEEEcCCCCeEEEEeC--CCCCCCCHHHHhhhhhccCCEEEEeccCH------HHHHHHHHHHHHhcC
Confidence 8666665666677777778888777763 33445676666655568999999987531 23456666677665
Q ss_pred ------CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 186 ------SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 186 ------~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
+++++|+.... +.+.++++++|++++|++|++.+ +..+.++.. ....+...+++.||||+|+
T Consensus 154 ~~~~~~~~v~~d~~~~~----------~~~~~~l~~~di~~~n~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~vvvt~G~ 221 (290)
T cd01939 154 RRPEIRITISVEVEKPR----------EELLELAAYCDVVFVSKDWAQSR-GYKSPEECL-RGEGPRAKKAALLVCTWGD 221 (290)
T ss_pred cCCCcceEEEEEeccCc----------hhhhhHHhhCCEEEEEhHHHHhc-CcCCHHHHH-HhhhhhccCCcEEEEEccc
Confidence 67888886421 23457888999999999988764 543322211 1122334688999999999
Q ss_pred cceEEEec-CceeeecCccc-ccccCCCCchHHHHHHHHHHHhcC-CcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 260 KGCRYYTK-EFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQ-NLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 260 ~G~~~~~~-~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~-~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
+|++++.+ ++.+++|+++. +++|||||||+|.|||++++++|+ + +++|+++|+++|++++++.|.
T Consensus 222 ~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-------~~~a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 222 QGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-------LSEALDFGNRVASQKCTGVGF 289 (290)
T ss_pred CCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-------HHHHHHHHHHHHHHHHhhhcC
Confidence 99988875 46778998874 699999999999999999999999 7 999999999999999999874
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=298.85 Aligned_cols=280 Identities=25% Similarity=0.330 Sum_probs=220.8
Q ss_pred eEEEEccceeecccCC--CCCCCC------CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCC
Q 018696 30 LVVCFGEMLIDFVPTV--GGVSLA------EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN 101 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~--~~~~~~------~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~g 101 (351)
+|+++|++++|+++.. ++.+.. ........+|| +.|+|.+|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~g 79 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGG-AANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEG 79 (304)
T ss_pred CEEEEcceeEEeeEeeccccccCCCCcceEEeeeEEecCcH-HHHHHHHHHHhCCCeEEEEEEcCCccHHHHHHHHHhCC
Confidence 5899999999999864 333221 12345678999 58999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccc------cchhhhcCccEEEEccccccCchhHHHHH
Q 018696 102 VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESE------LDKNLIKQGSIFHYGSISLIAEPCRSTQL 175 (351)
Q Consensus 102 id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------i~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
|+++++ ..++.+|+.++++.+. +++.+..+.. ....++.+. .....+++++++|++++. ......+.+.
T Consensus 80 I~~~~~-~~~~~~t~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~v~~s~~~-~~~~~~~~~~ 154 (304)
T cd01172 80 IDTDGI-VDEGRPTTTKTRVIAR-NQQLLRVDRE--DDSPLSAEEEQRLIERIAERLPEADVVILSDYG-KGVLTPRVIE 154 (304)
T ss_pred CCcceE-ecCCCCceEEEEEecC-CcEEEEEecC--CCCCCCHHHHHHHHHHHHHhhccCCEEEEEcCC-CCccCHHHHH
Confidence 999984 5567788888877764 4455544321 222232221 113457899999997642 2223446778
Q ss_pred HHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHh-cCCCeE
Q 018696 176 AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLF-HPNLKL 252 (351)
Q Consensus 176 ~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~-~~g~~~ 252 (351)
.+++.+++.+.++++|++... ...++++|++++|++|++.+++.... ++..+.++.+. +.|++.
T Consensus 155 ~~~~~a~~~~~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~ 221 (304)
T cd01172 155 ALIAAARELGIPVLVDPKGRD-------------YSKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLELLNLEA 221 (304)
T ss_pred HHHHHHHhcCCCEEEeCCCcc-------------hhhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCCe
Confidence 888999999999999997531 03567999999999999999986422 23334556665 478999
Q ss_pred EEEeeCCcceEEEe-cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 253 LIVTEGSKGCRYYT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 253 vvvt~G~~G~~~~~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
||||+|++|+++++ +++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-------~~~al~~a~a~Aa~~~~~~g~ 294 (304)
T cd01172 222 LLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-------LEEAAFLANAAAGVVVGKVGT 294 (304)
T ss_pred EEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhheeeecCCC
Confidence 99999999999998 6788999999999999999999999999999999999 999999999999999999998
Q ss_pred CCCC
Q 018696 332 IPAL 335 (351)
Q Consensus 332 ~~~~ 335 (351)
.+.+
T Consensus 295 ~~~~ 298 (304)
T cd01172 295 APVT 298 (304)
T ss_pred CCcC
Confidence 7643
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=293.65 Aligned_cols=294 Identities=16% Similarity=0.150 Sum_probs=237.0
Q ss_pred CceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|-.+|.=++++|+++.++.++.. +......++||++.|+|.+|++||.++.++|++|+|.+++. .+.|++.||++
T Consensus 3 ~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~i~~vG~D~~~~~-~~~l~~~gv~~ 81 (312)
T PRK09513 3 RRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGF-QQLFSELGIAN 81 (312)
T ss_pred ceEEEEecChHHeEEEEcCceecCCeeeecceeecCCchHHHHHHHHHHcCCCeEEEEEecCccHHHH-HHHHHHcCCCc
Confidence 344568889999999998887643 35578899999999999999999999999999999999986 68899999998
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAAM 178 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (351)
.++ ..++ +|+.++.+++.+|+++...+ +.. .++..+++ ...+++++++|+++... .....+.+.+++
T Consensus 82 ~~~-~~~~-~t~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~l~~~d~v~~~g~~~-~~~~~~~~~~~~ 154 (312)
T PRK09513 82 RFQ-VVQG-RTRINVKLTEKDGEVTDFNF--SGF--EVTPADWERFVTDSLSWLGQFDMVAVSGSLP-RGVSPEAFTDWM 154 (312)
T ss_pred cEE-ECCC-CCEEEEEEEeCCCcEEEEeC--CCC--CCCHHHHHHHHHHHHhhcCCCCEEEEECCCC-CCCCHHHHHHHH
Confidence 765 4444 68888888877787765543 222 23333221 23578999999988643 233457778889
Q ss_pred HHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEe
Q 018696 179 NLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVT 256 (351)
Q Consensus 179 ~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt 256 (351)
+.+++.|.++++|++.. ..+ ..+..+.|++++|++|+..+++....+ +..++++.+.+.|++.||||
T Consensus 155 ~~a~~~g~~v~~D~~~~--------~~~---~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 223 (312)
T PRK09513 155 TRLRSQCPCIIFDSSRE--------ALV---AGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALREQGIAHVVIS 223 (312)
T ss_pred HHHHhcCCEEEEECChH--------HHH---HHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 99999999999998621 111 223457899999999999999875432 33345677888999999999
Q ss_pred eCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCC
Q 018696 257 EGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALP 336 (351)
Q Consensus 257 ~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~ 336 (351)
+|++|++++.+++.++++++.++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.+ .++|
T Consensus 224 ~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-------~~~a~~~A~a~Aa~~~~~~~--~~~~ 294 (312)
T PRK09513 224 LGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-------SEHTLRLATAVSALAVSQSN--VGIT 294 (312)
T ss_pred eCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhCCC--CCCC
Confidence 99999999888777788888899999999999999999999999999 99999999999999999987 3788
Q ss_pred CHHHHHHHHhhhc
Q 018696 337 TKEAALKLLHTVA 349 (351)
Q Consensus 337 ~~~~v~~~l~~~~ 349 (351)
+.+++++++++++
T Consensus 295 ~~~e~~~~l~~~~ 307 (312)
T PRK09513 295 DRPQLAAMMARVD 307 (312)
T ss_pred CHHHHHHHHhceE
Confidence 9999999998765
|
|
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=294.28 Aligned_cols=294 Identities=16% Similarity=0.181 Sum_probs=232.2
Q ss_pred EEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 31 VVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
+.+.=++.+|.++..+..+.. ....+..++||++.|+|.+|++||.++.++|.+|+| +|+++++.|++.||+++++
T Consensus 2 ~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~~-~G~~i~~~l~~~GV~~~~~ 80 (309)
T TIGR01231 2 LTVTLNPSVDISYPLTALKLDTVNRVQEVSKTAGGKGLNVTRVLAQVGDPVLASGFLGGK-LGEFIEKELDHSDIKHAFY 80 (309)
T ss_pred EEEEcchHHeEEEEcCCeeeCceEeeceeeecCCccHHHHHHHHHHcCCCeEEEEEecCh-hHHHHHHHHHHcCCceeEE
Confidence 356667889998888776654 345678999999999999999999999999999975 9999999999999999987
Q ss_pred eecCCCCCeEEEEEEecCCCceEEEecCCcccccC--Ccccc--chhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLL--CESEL--DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 108 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~i--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
...+ .|++++.++. +|++++..+.. .+... ..+.+ ....+++++++|+++... ...+...+..+++.+++
T Consensus 81 ~~~~--~t~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~a~~ 154 (309)
T TIGR01231 81 KISG--ETRNCIAILH-EGQQTEILEQG--PEISNQEAAGFLKHFEQLLEKVEVVAISGSLP-KGLPQDYYAQIIERCQN 154 (309)
T ss_pred ECCC--CCEEeEEEEe-CCCEEEEeCCC--CCCCHHHHHHHHHHHHHHhccCCEEEEECCCC-CCcCHHHHHHHHHHHHh
Confidence 7543 4555655553 67777765432 22111 10111 124578999999988642 23345678889999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC---ChhHHHHHHHhcCCCeEEEEeeCCc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH---NDDNVVLEKLFHPNLKLLIVTEGSK 260 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~ 260 (351)
.|.++++|++.. . ...+.+.+.++|++++|++|++.+++.... ++..+.++.+...|++.|++|+|++
T Consensus 155 ~g~~v~~D~~~~--------~-~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~vivT~G~~ 225 (309)
T TIGR01231 155 KGVPVVLDCSGA--------T-LQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQPLFSGIEWIIVSLGAQ 225 (309)
T ss_pred CCCeEEEECChH--------H-HHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCC
Confidence 999999998632 1 123344467899999999999999986432 2223345566678999999999999
Q ss_pred ceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 261 GCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 261 G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.+. +..+.++
T Consensus 226 G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-------~~~a~~~a~a~aa~~~~~~~~--~~~~~~~ 296 (309)
T TIGR01231 226 GAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-------DHDLLKKANTLGMLNAQEAQT--GHVNLNN 296 (309)
T ss_pred ceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCccc--CCCCHHH
Confidence 9999988888889999999999999999999999999999999 999999999999999998876 4568999
Q ss_pred HHHHHhhhc
Q 018696 341 ALKLLHTVA 349 (351)
Q Consensus 341 v~~~l~~~~ 349 (351)
++++.++++
T Consensus 297 ~~~~~~~i~ 305 (309)
T TIGR01231 297 YDDLFNQIE 305 (309)
T ss_pred HHHHHhceE
Confidence 999999875
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=285.85 Aligned_cols=259 Identities=26% Similarity=0.294 Sum_probs=209.8
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+++|++++|++...+ +.++||++.|+|.+|++||.+|.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------~~~~GG~~~NvA~~l~~lG~~~~~is~vG~D~~g~~i~~~l~~~gI~~~~~~ 70 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------KAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVH 70 (260)
T ss_pred CeEEEeccceeeecccCC----------ccccCccHHHHHHHHHHcCCcceEEEEecCcHHHHHHHHHHHHcCCcchhee
Confidence 479999999999997642 3789999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
..++ +|+.+++.++ +++|.+..+. .+....+..+..+.+.+.+++++|++... ...++++.+++++.++
T Consensus 71 ~~~~-~t~~~~~~~~-~~~r~~~~~~-~~~~~~~~~~~~~~~~l~~~~~v~~~~~~--------~~~~~~~~~~~~~~~v 139 (260)
T PRK09813 71 TKHG-VTAQTQVELH-DNDRVFGDYT-EGVMADFALSEEDYAWLAQYDIVHAAIWG--------HAEDAFPQLHAAGKLT 139 (260)
T ss_pred eecC-CCceEEEEEe-CCcEEeeccC-CCcccccccCHHHHHHHHhCCEEEEeccc--------hHHHHHHHHHHcCCeE
Confidence 7665 6777777664 5777776542 22222222222233567899999986421 1235677788899999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecC
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 268 (351)
++|++.+.. .+.+.++++++|+++.|+.+. .....+.++++.+.|++.++||.|++|++++.++
T Consensus 140 ~~D~~~~~~--------~~~~~~~~~~~d~~~~~~~~~--------~~~~~~~~~~~~~~g~~~viit~G~~Ga~~~~~~ 203 (260)
T PRK09813 140 AFDFSDKWD--------SPLWQTLVPHLDYAFASAPQE--------DEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGA 203 (260)
T ss_pred EEEcCCCcc--------HHHHHHhCCceeEEEecCCcc--------hHHHHHHHHHHHHcCCCEEEEEECCCceEEEECC
Confidence 999975421 134567889999999886531 1123346677888999999999999999999988
Q ss_pred ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 269 ~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
+.+++|+++++++|||||||+|+|||++++.+|++ +++|+++|+++|++++++.|+
T Consensus 204 ~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-------~~~al~~a~~~aa~~~~~~G~ 259 (260)
T PRK09813 204 QFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-------LPQAMAQGTACAAKTIQYHGA 259 (260)
T ss_pred EEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCC
Confidence 88999999999999999999999999999999999 999999999999999999885
|
|
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=290.82 Aligned_cols=276 Identities=25% Similarity=0.354 Sum_probs=222.3
Q ss_pred EEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 31 VVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
|+++|++++|+++..+..|.. ........+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++.+
T Consensus 2 v~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~~~lG~D~~g~~i~~~L~~~gI~~~~~ 81 (288)
T cd01941 2 IVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESEKAGLNVRGI 81 (288)
T ss_pred eEEEEeEEEeeeecccCccccCCCCCeeEEEccCcHHHHHHHHHHHhCCCcEEEEEEecCccHHHHHHHHHHcCCcccee
Confidence 899999999999888775543 12356788999999999999999999999999999999999999999999999988
Q ss_pred eecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 108 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
. .++.+|+.++++++.+|++.+... ++.....++.+.++ ...+..++++++++. .+.+.+..+++.+++.+
T Consensus 82 ~-~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~~~~ 154 (288)
T cd01941 82 V-FEGRSTASYTAILDKDGDLVVALA-DMDIYELLTPDFLRKIREALKEAKPIVVDAN-----LPEEALEYLLALAAKHG 154 (288)
T ss_pred e-eCCCCcceEEEEECCCCCEEEEEe-chHhhhhCCHHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHHHHhhhhcC
Confidence 7 667789999999888888876332 23333333332221 345789999987542 24456778888899999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
.++++||.... ..++ +.++++++|++++|++|+..+++....+ .....++.+...|++.+++|.|++|++
T Consensus 155 ~~v~~d~~~~~-------~~~~-~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~Ga~ 226 (288)
T cd01941 155 VPVAFEPTSAP-------KLKK-LFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAKGVL 226 (288)
T ss_pred CcEEEEccchH-------Hhcc-chhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHHHHcCCcEEEEEeCCCcEE
Confidence 99999986321 1111 1157899999999999999998865432 222346677889999999999999999
Q ss_pred EEec---CceeeecC-cccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 264 YYTK---EFKGRVPG-VKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 264 ~~~~---~~~~~v~~-~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++.+ +..+++|+ ++++++|||||||+|.|||++++++|++ +++|+++|+++|+.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-------~~~al~~a~~~Aa~~~~~ 288 (288)
T cd01941 227 LSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------LDDSLRFAQAAAALTLES 288 (288)
T ss_pred EEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcC
Confidence 9887 46678898 5889999999999999999999999999 999999999999999863
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=297.74 Aligned_cols=278 Identities=18% Similarity=0.245 Sum_probs=226.6
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHc-CC--Ce--EEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRL-GG--SS--AFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l-G~--~v--~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+++++|++++|++...++ ..+...+||++.|+|+++++| |. ++ .+++.+|+| +|+++++.|++.||++
T Consensus 1 ~~~~~G~~~~d~i~~~~~------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~~~~vG~D-~G~~l~~~L~~~GVd~ 73 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------EPVTNVLGGAGTYAILGARLFLPPPLSRSISWIVDKGSD-FPKSVEDELESWGTGM 73 (328)
T ss_pred CccccCcEEeeccccCCC------CccccccCCchhhHhhceeeecCCccccceeeEEecCCC-CCHHHHHHHHhcCCce
Confidence 378999999999998763 345688999999999999999 54 77 889999999 9999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH-
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE- 183 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~- 183 (351)
++ ...++.+|+.++++++.+|++.+.++ ...+..+++++++...+..++++|+++... ...+...++++.+++
T Consensus 74 ~~-~~~~~~~Tg~~~v~~~~~g~r~~~~~--~~~~~~~~~~~l~~~~~~~a~~~hl~~~~~---~~~~~~~~~~~~a~~~ 147 (328)
T cd01943 74 VF-RRDPGRLTTRGLNIYDGNDRRFFKYL--TPKKRIDVSDDLNSTPLIRSSCIHLICSPE---RCASIVDDIINLFKLL 147 (328)
T ss_pred EE-EeCCCCcchhhhhhcCCCCcceeeec--CcccccccccccccccccCCCeEEEECCHH---HHHHHHHHHHHHHHhh
Confidence 98 77778899998888888888877664 344566777777766688999999976431 123677788888888
Q ss_pred -----cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh--HH-H-------HHHHhcC
Q 018696 184 -----SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD--NV-V-------LEKLFHP 248 (351)
Q Consensus 184 -----~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~--~~-~-------~~~l~~~ 248 (351)
.+.++++||+.... .. ..++.+.++++++|++++|++|+..+++....++. .. . ..++...
T Consensus 148 ~~d~~~g~~~~~d~~~~~~---~~-~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (328)
T cd01943 148 KGNSPTRPKIVWEPLPDSC---DP-ENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGILQD 223 (328)
T ss_pred ccccCCccEEEEecCCccc---Ch-hhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccchhhhhhhHHHHHHHhhhcc
Confidence 78889999863211 11 13456788999999999999999999987653221 11 1 1123467
Q ss_pred CCeEEEEeeCCcceEEEe--cCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHh
Q 018696 249 NLKLLIVTEGSKGCRYYT--KEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGA 323 (351)
Q Consensus 249 g~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa 323 (351)
+++.||||+|++|++++. +++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 224 g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~-------~~~al~~a~a~Aa 296 (328)
T cd01943 224 PGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKS-------IDEACIYGSVAAS 296 (328)
T ss_pred CCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 899999999999999988 456788999988 9999999999999999999999999 9999999999999
Q ss_pred HHhcccCC
Q 018696 324 LTVTERGA 331 (351)
Q Consensus 324 ~~i~~~g~ 331 (351)
+++++.|.
T Consensus 297 ~~v~~~G~ 304 (328)
T cd01943 297 FAIEQVGL 304 (328)
T ss_pred HHHccCCC
Confidence 99999995
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=289.67 Aligned_cols=285 Identities=27% Similarity=0.319 Sum_probs=227.6
Q ss_pred cceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCC
Q 018696 36 EMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112 (351)
Q Consensus 36 ~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~ 112 (351)
++.+|+++.+++.+.. ........+||.+.|+|.++++||.++.++|.+|+| +|+.+++.|++.||++.+++...
T Consensus 7 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l~~lg~~~~~i~~vG~D-~g~~i~~~l~~~gI~~~~i~~~~- 84 (303)
T TIGR03168 7 NPAIDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGFLGGF-TGEFIEALLAEEGIKNDFVEVKG- 84 (303)
T ss_pred chHHeEEEEcCccccCceeecCcccccCCcchhhHHHHHHHcCCCeEEEEEeCCc-hhHHHHHHHHHcCCCceEEECCC-
Confidence 3456777666654321 344677999999999999999999999999999999 79999999999999999887642
Q ss_pred CCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 113 ~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
.|++++.+.+.+|++....+ ... .++.++++. +.+++++++|+++... .....+....+++.+++.+.
T Consensus 85 -~t~~~~~~~~~~g~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~g~ 158 (303)
T TIGR03168 85 -ETRINVKIKESSGEETELNE--PGP--EISEEELEQLLEKLRELLASGDIVVISGSLP-PGVPPDFYAQLIAIARKRGA 158 (303)
T ss_pred -CCEEeEEEEeCCCCEEEEeC--cCC--CCCHHHHHHHHHHHHHhccCCCEEEEeCCCC-CCCCHHHHHHHHHHHHHCCC
Confidence 56667776777776654433 222 255554431 3478999999987532 22345677788899999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
++++||+.. . ..+.+..++|++++|++|+..+++.... ++..++++.+.+.|++.+|||+|++|+++
T Consensus 159 ~v~~D~~~~--------~---~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vviT~g~~G~~~ 227 (303)
T TIGR03168 159 KVILDTSGE--------A---LREALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARELLDRGAENVLVSLGADGALL 227 (303)
T ss_pred EEEEECCcH--------H---HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEeecCCCcEE
Confidence 999999631 1 1122335899999999999999987543 23345677788899999999999999999
Q ss_pred EecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHH
Q 018696 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKL 344 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~ 344 (351)
+.+++.+++|+++++++|++||||+|.|+|++++++|++ +++|+++|+++|+.++++.|+. .|+.++++++
T Consensus 228 ~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-------i~~a~~~A~~~aa~~~~~~G~~--~~~~~~~~~~ 298 (303)
T TIGR03168 228 VTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-------LEEALRFAVAAGSAAAFSPGTG--LPDPEDVEEL 298 (303)
T ss_pred EeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcC--CCCHHHHHHH
Confidence 998888899999999999999999999999999999999 9999999999999999999984 5899999999
Q ss_pred Hhhh
Q 018696 345 LHTV 348 (351)
Q Consensus 345 l~~~ 348 (351)
+.++
T Consensus 299 ~~~~ 302 (303)
T TIGR03168 299 LDQV 302 (303)
T ss_pred Hhhc
Confidence 8875
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=290.28 Aligned_cols=294 Identities=22% Similarity=0.239 Sum_probs=235.3
Q ss_pred eEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
-+.+.=++.+|+++.++..+.. ........+||++.|+|.+|++||.++.+++.+|+ .+|+.+++.|++.||++++
T Consensus 4 i~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~i~~vG~-~~g~~i~~~l~~~gv~~~~ 82 (309)
T PRK10294 4 IYTLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINVARAIAHLGGSATAIFPAGG-ATGEHLVSLLADENVPVAT 82 (309)
T ss_pred EEEEecChHHeEEEEeCceeeCCeEEeccceecCCccHHHHHHHHHHcCCCeEEEEEecC-ccHHHHHHHHHHcCCCceE
Confidence 4677889999999999887543 45667888999999999999999999999999997 6999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch-----hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK-----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
+...+. .++..++..+.+|++.+..+ ++.. ++.+.++. ..++.++++++++... ...+.+.+.++++.+
T Consensus 83 ~~~~~~-~~~~~~i~~~~~g~~~~~~~--~~~~--~~~~~~~~l~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~a 156 (309)
T PRK10294 83 VEAKDW-TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESGAILVISGSLP-PGVKLEKLTQLISAA 156 (309)
T ss_pred EECCCC-CeeeEEEEEcCCCcEEEEEC--CCCC--CCHHHHHHHHHHHHhcCCCCEEEEeCCCC-CCCCHHHHHHHHHHH
Confidence 877654 34444555667787665543 3322 44443332 2367889999987543 333457888999999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCC-CeEEEEeeC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPN-LKLLIVTEG 258 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g-~~~vvvt~G 258 (351)
++.|.++++|++.. ..+..+ .++++|++++|++|+..+++.... ++..++++.+++.+ ++.||||+|
T Consensus 157 ~~~g~~v~~D~~~~--------~~~~~~--~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l~~~~~~~~vvvT~G 226 (309)
T PRK10294 157 QKQGIRCIIDSSGD--------ALSAAL--AIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELVNSGKAKRVVVSLG 226 (309)
T ss_pred HHcCCeEEEeCCCH--------HHHHHH--hcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEEecC
Confidence 99999999998521 111111 246899999999999999986533 23345677788776 889999999
Q ss_pred CcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 259 ~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
++|++++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|+.+ ...
T Consensus 227 ~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-------~~~al~~a~a~aa~~v~~~G~~~--~~~ 297 (309)
T PRK10294 227 PQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTRL--CSH 297 (309)
T ss_pred CCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCC--CCH
Confidence 999999988877889998999999999999999999999999999 99999999999999999999864 688
Q ss_pred HHHHHHHhhhc
Q 018696 339 EAALKLLHTVA 349 (351)
Q Consensus 339 ~~v~~~l~~~~ 349 (351)
++++++++++.
T Consensus 298 ~~~~~~~~~~~ 308 (309)
T PRK10294 298 DDTQKIYAYLS 308 (309)
T ss_pred HHHHHHHHHhc
Confidence 99999888764
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=285.01 Aligned_cols=275 Identities=26% Similarity=0.292 Sum_probs=222.8
Q ss_pred eEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
-..|+|++++|+++.+++.+.. ........+||++.|+|.+|++||.+|.++|.+|+| +|+.+++.|++.||++.+
T Consensus 2 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~v~~is~vG~D-~g~~i~~~l~~~gi~~~~ 80 (289)
T cd01164 2 IYTVTLNPAIDLTIELDQLQPGEVNRVSSTRKDAGGKGINVARVLKDLGVEVTALGFLGGF-TGDFFEALLKEEGIPDDF 80 (289)
T ss_pred EEEEecChHHeEEEEcCcccCCceeecccccccCCcchhHHHHHHHHcCCCeEEEEEccCc-hhHHHHHHHHHcCCCceE
Confidence 4689999999999999987643 355678999999999999999999999999999999 899999999999999998
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+... .+|++.+.+.+.++++..... ... .++.++++. +.+++++++|+++... .....+....+++.
T Consensus 81 ~~~~--~~t~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~ 153 (289)
T cd01164 81 VEVA--GETRINVKIKEEDGTETEINE--PGP--EISEEELEALLEKLKALLKKGDIVVLSGSLP-PGVPADFYAELVRL 153 (289)
T ss_pred EECC--CCCEEEEEEEeCCCCEEEEeC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEEEeCCCC-CCcCHHHHHHHHHH
Confidence 8764 346777777766665554432 222 244443321 3467899999987532 22234677788888
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++.+.++++|++.. . +.+++ +++|++++|++|++.+++.... ++..++++.+.+.+++.++||+
T Consensus 154 ~~~~~~~i~~D~~~~--------~----~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vivt~ 221 (289)
T cd01164 154 AREKGARVILDTSGE--------A----LLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLVSL 221 (289)
T ss_pred HHHcCCeEEEECChH--------H----HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 999999999998631 1 12333 6999999999999999986532 3344567788889999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
|++|++++.+++.+++++++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+
T Consensus 222 G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------~~~a~~~A~~~Aa~~~~~~G~ 288 (289)
T cd01164 222 GADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-------LEEALRLAVAAGSATAFSPGT 288 (289)
T ss_pred CCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCccC
Confidence 9999999988888889999999999999999999999999999999 999999999999999999874
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=299.15 Aligned_cols=291 Identities=21% Similarity=0.212 Sum_probs=226.3
Q ss_pred CceEEEEccceeecccCCC--CC----C--CCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHH
Q 018696 28 DRLVVCFGEMLIDFVPTVG--GV----S--LAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~--~~----~--~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~ 99 (351)
+++|+|+|++++|+++..+ +. | ..........+|| +.|+|.+|++||.+|.++|.+|+|.+|+++++.|++
T Consensus 10 ~~~ilviG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~ 88 (473)
T PRK11316 10 RAGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVNQIEERPGG-AANVAMNIASLGAQARLVGLTGIDEAARALSKLLAA 88 (473)
T ss_pred CCcEEEECccEEeeeeecccceeCCCCCCCEEEeeeEEecCcH-HHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHHHHH
Confidence 5679999999999998642 22 1 1234567888999 599999999999999999999999999999999999
Q ss_pred CCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc---hhhhcCccEEEEccccccCchhHHHHHH
Q 018696 100 NNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD---KNLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 100 ~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
.||+++++.+ ++.+|++++++++.++.... ...+. ....+..+.+. ...+.++++++++++.. ...+....
T Consensus 89 ~gI~~~~v~~-~~~~T~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~l~~~~~v~is~~~~---~~~~~~~~ 162 (473)
T PRK11316 89 VGVKCDFVSV-PTHPTITKLRVLSRNQQLIR-LDFEE-GFEGVDPQPLLERIEQALPSIGALVLSDYAK---GALASVQA 162 (473)
T ss_pred cCCceeEEEc-CCCCCCeeEEEEeCCceEEe-ccccc-CCCchhHHHHHHHHHHHhccCCEEEEecCCc---cchhHHHH
Confidence 9999998876 56788888888765443221 11111 11112233221 34578999999876532 12345778
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC-ChhHHHHHHHh-cCCCeEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH-NDDNVVLEKLF-HPNLKLLI 254 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~~l~-~~g~~~vv 254 (351)
+++.+++.+.++++||+... ...++++|++++|+.|++.+++.... ++....+++++ +.|++.|+
T Consensus 163 ~~~~~k~~g~~vv~Dp~~~~-------------~~~~~~~dil~pN~~Ea~~l~g~~~~~~~~~~~~~~l~~~~g~~~vv 229 (473)
T PRK11316 163 MIQLARKAGVPVLIDPKGTD-------------FERYRGATLLTPNLSEFEAVVGKCKDEAELVEKGMKLIADYDLSALL 229 (473)
T ss_pred HHHHHHhcCCeEEEeCCCCC-------------ccccCCCeEECcCHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88889999999999996431 12356899999999999999985322 22223344544 68999999
Q ss_pred EeeCCcceEEEecCc-eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCC
Q 018696 255 VTEGSKGCRYYTKEF-KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIP 333 (351)
Q Consensus 255 vt~G~~G~~~~~~~~-~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~ 333 (351)
||.|++|++++.+++ .+++|+++++++|++||||+|.|||++++++|++ +++|+++|+++|++++++.|+.+
T Consensus 230 VT~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-------~~~al~~A~a~Aa~~v~~~G~~~ 302 (473)
T PRK11316 230 VTRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-------LEEACALANAAAGVVVGKLGTST 302 (473)
T ss_pred EEecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhcccCCCcc
Confidence 999999998887765 5789999999999999999999999999999999 99999999999999999999864
Q ss_pred CCCCHHHHHHHHhh
Q 018696 334 ALPTKEAALKLLHT 347 (351)
Q Consensus 334 ~~~~~~~v~~~l~~ 347 (351)
++.++++++++.
T Consensus 303 --~~~~~l~~~l~~ 314 (473)
T PRK11316 303 --VSPIELENALRG 314 (473)
T ss_pred --CCHHHHHHHHhc
Confidence 689999998874
|
|
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=283.21 Aligned_cols=263 Identities=19% Similarity=0.266 Sum_probs=206.5
Q ss_pred CCCccccCCChHHHHHHH---HHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCce
Q 018696 53 APAFKKAPGGAPANVAVG---ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGERE 129 (351)
Q Consensus 53 ~~~~~~~~GG~~~n~a~~---l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~ 129 (351)
.......+||++.|+|.. |+++|.++.++|.+|+|.+|+++++.|+++||+++++. .++.+|+.++++++ +|+|.
T Consensus 44 ~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~vG~D~~g~~i~~~L~~~gVd~~~~~-~~~~~T~~~~i~~~-~g~r~ 121 (332)
T PLN02548 44 KYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYE-DESTPTGTCAVLVV-GGERS 121 (332)
T ss_pred cCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEEEcCChhHHHHHHHHHHcCCceeeec-cCCCCCceEEEEEe-cCCce
Confidence 446788999999998554 45679999999999999999999999999999999875 46678999888875 78888
Q ss_pred EEEecCCcccccCCccccc----hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHH
Q 018696 130 FLFFRHPSADMLLCESELD----KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAA 205 (351)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~ 205 (351)
+..+ ......++.+.+. ...++.++++|++++... .+.+.+..+++.+++.+.++.+|+.. ++|. ...
T Consensus 122 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~~~~~~~~--~~~~--~~~ 193 (332)
T PLN02548 122 LVAN--LSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT--VSPESIMLVAEHAAANNKTFMMNLSA--PFIC--EFF 193 (332)
T ss_pred eeec--cchhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc--CCHHHHHHHHHHHHHcCCEEEEECCC--hhHH--HHh
Confidence 7654 3333334444332 335788999999886442 23467778888899999888888753 2232 234
Q ss_pred HHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhc------CCCeEEEEeeCCcceEEEecCceeeecCc-
Q 018696 206 REGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFH------PNLKLLIVTEGSKGCRYYTKEFKGRVPGV- 276 (351)
Q Consensus 206 ~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~v~~~- 276 (351)
.+.+.++++++|++++|++|+..+++.... ++..+.++++.+ .+++.||||+|++|++++.+++.+++|++
T Consensus 194 ~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~ 273 (332)
T PLN02548 194 KDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIP 273 (332)
T ss_pred HHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEecccc
Confidence 566888899999999999999999885332 222233333332 25789999999999999988888888764
Q ss_pred --ccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 277 --KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 277 --~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+++++|||||||+|.|||++++++|++ +++|+++|+++|++++++.|+.
T Consensus 274 ~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~eal~~a~aaAa~~v~~~G~~ 324 (332)
T PLN02548 274 LPKEKLVDTNGAGDAFVGGFLSQLVQGKD-------IEECVRAGNYAANVIIQRSGCT 324 (332)
T ss_pred CCcCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCC
Confidence 347999999999999999999999999 9999999999999999999986
|
|
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=265.28 Aligned_cols=291 Identities=25% Similarity=0.342 Sum_probs=240.3
Q ss_pred EEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 31 VVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
+.+.=++.+|+++..+..... +......++||+|.|||+.|+.||.++..+|++|.+ .|++|.+.|++.||...++
T Consensus 3 ~TvTLNPaiD~~~~l~~l~~g~vNr~~~~~~~aGGKGINVa~vL~~lG~~~~a~GflGg~-tg~~~~~~l~~~gi~~~fv 81 (310)
T COG1105 3 YTVTLNPALDYTVFLDELELGEVNRVRAVTKTAGGKGINVARVLKDLGIPVTALGFLGGF-TGEFFVALLKDEGIPDAFV 81 (310)
T ss_pred EEEecChhHhheeecccccccceeeeccceecCCCCceeHHHHHHHcCCCceEEEecCCc-cHHHHHHHHHhcCCCceEE
Confidence 566667889999888766543 466778999999999999999999999999999998 9999999999999999999
Q ss_pred eecCCCCCeEEEEEEec-CCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 108 RYDSTARTALAFVTLRA-DGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 108 ~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
.+....+... -+.+. ++..+-+. .+++. ++.+++.. ..+++.|++.++|- +....+.+.+.++++.
T Consensus 82 ~v~g~TRinv--ki~~~~~~~~Tein--~~Gp~--is~~~~~~~l~~~~~~l~~~d~VvlsGS-lP~g~~~d~y~~li~~ 154 (310)
T COG1105 82 EVKGDTRINV--KILDEEDGEETEIN--FPGPE--ISEAELEQFLEQLKALLESDDIVVLSGS-LPPGVPPDAYAELIRI 154 (310)
T ss_pred EccCCCeeeE--EEEecCCCcEEEec--CCCCC--CCHHHHHHHHHHHHHhcccCCEEEEeCC-CCCCCCHHHHHHHHHH
Confidence 8876655544 44444 33233222 24443 66665542 34788898888773 4556678999999999
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.|+++++|.. .+.+.+.++. .+.+++||.+|++.+++....+ +....+++++..|++.|||++|
T Consensus 155 ~~~~g~~vilD~S--------g~~L~~~L~~---~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l~~~g~~~ViVSlG 223 (310)
T COG1105 155 LRQQGAKVILDTS--------GEALLAALEA---KPWLIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIVSLG 223 (310)
T ss_pred HHhcCCeEEEECC--------hHHHHHHHcc---CCcEEecCHHHHHHHhCCCCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 9999999999963 4444444443 6999999999999999987653 3445677799999999999999
Q ss_pred CcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 259 ~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
.+|+++.++++.+++.++++++++++||||++.|||+++++++++ +++++++|+++++.++++.+. +.++.
T Consensus 224 ~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-------~e~~l~~avA~g~a~~~~~~~--~~~~~ 294 (310)
T COG1105 224 ADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-------LEEALRFAVACGAAAASQKGT--GIPDL 294 (310)
T ss_pred CcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhcCCC--CCCCH
Confidence 999999999999999999999999999999999999999999999 999999999999999999987 66899
Q ss_pred HHHHHHHhhhc
Q 018696 339 EAALKLLHTVA 349 (351)
Q Consensus 339 ~~v~~~l~~~~ 349 (351)
++++++++++.
T Consensus 295 ~~~~~~~~~v~ 305 (310)
T COG1105 295 DQLKKIYAQVT 305 (310)
T ss_pred HHHHHHhhheE
Confidence 99999988764
|
|
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=272.73 Aligned_cols=273 Identities=24% Similarity=0.292 Sum_probs=218.1
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
..++|+++|++++|++....+ .....+||++.|+|.+|++||.++.++|.+|+|.. .+++...
T Consensus 10 ~~~~vlvvG~~~~D~i~~~g~-------~~~~~~GG~a~N~A~alarLG~~~~lis~VG~D~~----------~~v~~~~ 72 (335)
T PLN02630 10 PQRRVLIVGNYCHDVLIQNGS-------VTAESLGGAASFISNVLDALSVECELVSKVGPDFL----------YQVSHPP 72 (335)
T ss_pred CCCCEEEEeeeeeeEEEeCCc-------EEEEecCcHHHHHHHHHHHcCCceEEEEEecCCcc----------ccccccc
Confidence 356899999999999987532 14578999999999999999999999999999941 3677655
Q ss_pred eeecCCCCCeEEEEEEec-----CCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRA-----DGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
+.. ++.+|+.+++++++ ++++++..+ .+++..+++++++...+..++.+++.+ +...+....+++.+
T Consensus 73 ~~~-~~~~T~~~~~~~~~g~~~~~~e~~i~~~--~ga~~~l~~~di~~~~~~~~~~~~l~~-----ei~~e~~~~~~~~a 144 (335)
T PLN02630 73 IVI-PDSKTTEFHADFDQGIDGNGHEDRVLKR--VCACDPIEPSDIPDMRYEFGMAVGVAG-----EILPETLERMVEIC 144 (335)
T ss_pred eec-CCCCceEEEEEEcCCcccCCCCeEEEEe--ccccCCCChHHCCHHHhcccceeeecC-----CCcHHHHHHHHHHh
Confidence 533 67789999888765 457776654 778888988888654577777776643 22356778888888
Q ss_pred HH-----cCCeEEEcCCCC-CCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEE
Q 018696 182 KE-----SGSILSYDPNLR-LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIV 255 (351)
Q Consensus 182 ~~-----~~~~v~~d~~~~-~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvv 255 (351)
+. ++..+++||... .++|... ...+.++++++|++++|++|+..+ +. . .+.+. ..|+|
T Consensus 145 ~~v~~D~~g~~~~~Dp~~~~~~~~~~~---~~~~~~~L~~iDil~~ne~Ea~~l----~~---~----~~~~~--~~vvv 208 (335)
T PLN02630 145 DVVVVDIQALIRVFDPVDGTVKLVKLE---ETGFYDMLPRIGFLKASSEEALFI----DV---E----EVRQK--CCVIV 208 (335)
T ss_pred hhheeccCceEEecCCcccccccchhh---HHHHHHHHHhCCEEEecHHHHhhc----CH---H----HHccC--CEEEE
Confidence 87 789999999763 3444211 123677899999999999999876 11 1 11222 37999
Q ss_pred eeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCC
Q 018696 256 TEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335 (351)
Q Consensus 256 t~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~ 335 (351)
|+|++|++++.+++.+++|+++++++|+|||||+|+|||++++++|++ +++|+++|+++|++++++.|. ..
T Consensus 209 t~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~ 279 (335)
T PLN02630 209 TNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VPDAALLGNYFGSLAVEQVGI--PK 279 (335)
T ss_pred EECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCC--CC
Confidence 999999999998888899999999999999999999999999999999 999999999999999999995 34
Q ss_pred CCHHHHHHHHhhhc
Q 018696 336 PTKEAALKLLHTVA 349 (351)
Q Consensus 336 ~~~~~v~~~l~~~~ 349 (351)
.+.+++++++++++
T Consensus 280 ~~~~~l~~~~~~i~ 293 (335)
T PLN02630 280 FDLRQLQRVKDEVQ 293 (335)
T ss_pred CCHHHHHHHhhcEE
Confidence 59999999988764
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=265.15 Aligned_cols=254 Identities=23% Similarity=0.275 Sum_probs=197.6
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+++|++++|++...+ +....+||++.|+|.+|++||.++.++|.+|+|..|+ ++.|++.||++.. .
T Consensus 1 ~il~iG~~~iD~~~~~~--------~~~~~~GG~~~Nva~~la~lG~~~~~i~~vG~D~~g~--~~~l~~~gv~~~~--~ 68 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------SGVVKPGGPATYASLTLSRLGLTVKLVTKVGRDYPDK--WSDLFDNGIEVIS--L 68 (254)
T ss_pred CeEEEcceeEEEEecCC--------ceEEecCchhhhHHHHHHHhCCCeEEEEeeCCCchHH--HHHHHHCCcEEEE--e
Confidence 58999999999998642 3468899999999999999999999999999998898 6889999998642 2
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
....|+.+++.++.+|++.+..+. ......... ...+.+++++|++++. .+....+.+.+ .+++
T Consensus 69 -~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~~v~ 132 (254)
T cd01937 69 -LSTETTTFELNYTNEGRTRTLLAK--CAAIPDTES---PLSTITAEIVILGPVP------EEISPSLFRKF----AFIS 132 (254)
T ss_pred -cCCCeEEEEEEecCCCCeeeeecc--ccCCccccc---ccccCcccEEEECCCc------chhcHHHHhhh----hhee
Confidence 334666666667767777776653 222222111 2357889999998652 22333333222 7899
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCc
Q 018696 190 YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269 (351)
Q Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 269 (351)
+|++.....|.. ....+.++++++|++++|++|+..+ ....+.++++.+.|++.++||.|++|++++++++
T Consensus 133 ~D~~~~~~~~~~---~~~~~~~~l~~~di~~~n~~E~~~~------~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~ 203 (254)
T cd01937 133 LDAQGFLRRANQ---EKLIKCVILKLHDVLKLSRVEAEVI------STPTELARLIKETGVKEIIVTDGEEGGYIFDGNG 203 (254)
T ss_pred Eccccceeeccc---cchHHHhhcccCcEEEEcHHHHhhc------CCHHHHHHHHHHcCCCEEEEeeCCcceEEEECCc
Confidence 999754222221 1223577899999999999999983 1233466778889999999999999999999888
Q ss_pred eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 270 ~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
.+++++++++++|+|||||+|.|+|++++++|++ +++|+++|+++|+++++
T Consensus 204 ~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 204 KYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-------IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred cEEccccCceeccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 8899999999999999999999999999999999 99999999999999875
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=265.27 Aligned_cols=272 Identities=21% Similarity=0.307 Sum_probs=206.3
Q ss_pred EEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeec
Q 018696 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD 110 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~ 110 (351)
|+++|++++|++..... .....+||++.|+|.+|++|| ++.++|.+|+| +++.+++.|++.||+++++.+.
T Consensus 2 v~~~G~~~~D~~~~~~~-------~~~~~~GG~a~N~a~~la~lg-~v~~i~~vG~D-~g~~~~~~l~~~gi~~~~v~~~ 72 (277)
T cd01946 2 LLVVGSVAFDAIETPFG-------KVDKALGGSATYFSLSASYFT-DVRLVGVVGED-FPEEDYKLLNSHNIVTLGLLSK 72 (277)
T ss_pred eEEEEEeeeeeecCCCc-------eeeeccCchHHHHHHHHHHhc-cceeEEeccCc-ChHHHHHHHHhccCcceeEEEe
Confidence 89999999999943221 245779999999999999998 69999999999 8999999999999999999887
Q ss_pred CCCCCeEEEEEEe--cCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 111 STARTALAFVTLR--ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 111 ~~~~t~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
++.+|........ .++.+..... ......+.+ .+ ...+++++++|++++ ..+...++++.+++. .++
T Consensus 73 ~~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~~~v~~~~~------~~~~~~~~~~~~~~~-~~v 141 (277)
T cd01946 73 EDGKTFHWAGRYHYDLNEADTLDTD--LNVFADFDP-QL-PEHYKDSEFVFLGNI------APELQREVLEQVKDP-KLV 141 (277)
T ss_pred cCCCeEEEeeEehhhcccccchhhh--hhHHhhcCC-CC-hHHhhcCCEEEECCC------CHHHHHHHHHHHHhC-CEE
Confidence 7666632111110 0122211110 111111222 12 345788999999764 235566777778776 889
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecC
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 268 (351)
++||. .+|. ....+.+.++++++|++++|++|++.+++.. ...+.++.+.+.|++.||+|+|.+|++++.++
T Consensus 142 ~~D~~---~~~~--~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 213 (277)
T cd01946 142 VMDTM---NFWI--SIKPEKLKKVLAKVDVVIINDGEARQLTGAA---NLVKAARLILAMGPKALIIKRGEYGALLFTDD 213 (277)
T ss_pred EEccH---HHhh--hhhHHHHHHHhccCCEEeCCHHHHHHHhCCc---hHHHHHHHHHHcCCCEEEEecCCCcEEEEECC
Confidence 99983 2342 1234567788999999999999999998853 33446678889999999999999999999888
Q ss_pred ceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 269 FKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 269 ~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+.+++|+++++ ++|||||||+|.|||+++|++|++. ...++++|+++|+++|+++|++.|+.
T Consensus 214 ~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~~--~~~~~~~a~~~a~~~aa~~~~~~G~~ 276 (277)
T cd01946 214 GYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKDT--SEANMRRAIIYGSAMASFCVEDFGTK 276 (277)
T ss_pred ceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCCc--chhhHHHHHHHhHHHHhhhhhhcCCC
Confidence 88889998875 8999999999999999999998531 12348999999999999999999864
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=236.71 Aligned_cols=285 Identities=20% Similarity=0.261 Sum_probs=226.7
Q ss_pred EEEEccceeecccCCCCCCCC------------------------CCCCccccCCChHHHHHHHHHHcCC---CeEEEee
Q 018696 31 VVCFGEMLIDFVPTVGGVSLA------------------------EAPAFKKAPGGAPANVAVGISRLGG---SSAFVGK 83 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~n~a~~l~~lG~---~v~~v~~ 83 (351)
.+.+|++++|+...++..... +....+..+||++.|.++++++++. ++.++|.
T Consensus 9 l~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~Gs 88 (343)
T KOG2854|consen 9 LVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFFGS 88 (343)
T ss_pred eeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEEee
Confidence 677999999999877632110 1225689999999999999999987 8999999
Q ss_pred cCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc----hhhhcCccEEE
Q 018696 84 LGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD----KNLIKQGSIFH 159 (351)
Q Consensus 84 vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~----~~~i~~~~~~~ 159 (351)
+|.|++|+.+++.+++.||++.+. +.++.+|++|.++++.++ |+..-+ .++...++.++++ +..++.+.++|
T Consensus 89 vG~Dk~ge~l~~~~~~aGv~~~yq-~~~d~~TGtCavli~~~n-RSL~an--LgAAn~f~~dhl~~~~~~~lveka~v~y 164 (343)
T KOG2854|consen 89 VGKDKFGELLKSKARAAGVNVHYQ-VKEDGPTGTCAVLITGDN-RSLCAN--LGAANCFKVDHLDKEENWALVEKAKVFY 164 (343)
T ss_pred ccCchHHHHHHHHHHhcCceEEEE-eccCCCCceEEEEEeCCC-cchhhc--cchhhccCHHHhcchhhhhhhhheeEEE
Confidence 999999999999999999999865 456779999999998777 666543 6677778777774 35789999999
Q ss_pred EccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCCh--
Q 018696 160 YGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHND-- 237 (351)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~-- 237 (351)
++++.+ ...++.+..+.+.+.+.+.+.+++.+... -++.+.+.+.++++++|+++.|++|++.+......+.
T Consensus 165 v~Gffl--tv~p~ai~~v~qh~~e~~r~~~lnlsapf----I~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~d 238 (343)
T KOG2854|consen 165 VAGFFL--TVSPDAIRKVAQHAAENNRVFTLNLSAPF----ISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKD 238 (343)
T ss_pred EEEEEE--EeChHHHHHHHHHHHHhcchhheeccchh----HHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccc
Confidence 999865 33457888888888888776666654221 1345677888899999999999999999876543221
Q ss_pred hHHHHHH---Hhc---CCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcCCcccch
Q 018696 238 DNVVLEK---LFH---PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQNLIKDE 308 (351)
Q Consensus 238 ~~~~~~~---l~~---~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~ 308 (351)
..+.... +-+ ...+.++||.|..+++...+++.+.+|..++ +++||+||||+|.+||++.|.+|++
T Consensus 239 v~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~----- 313 (343)
T KOG2854|consen 239 VKEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKS----- 313 (343)
T ss_pred hHHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCC-----
Confidence 1111112 222 3467899999999999998887776666654 6999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhcccCCC
Q 018696 309 NRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 309 ~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+++|++.|+.+|+..+...|..
T Consensus 314 --l~~cir~g~~aa~~vi~~~G~~ 335 (343)
T KOG2854|consen 314 --LEECIRAGSYAASHVIRRVGCT 335 (343)
T ss_pred --HHHHHHHHHHHhhheeeccCCC
Confidence 9999999999999999999863
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=234.80 Aligned_cols=287 Identities=25% Similarity=0.279 Sum_probs=227.4
Q ss_pred CceEEEEccceeecccCCCC------CCC--CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHH
Q 018696 28 DRLVVCFGEMLIDFVPTVGG------VSL--AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~------~~~--~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~ 99 (351)
..+|+|+|++++|.+.+... .|. .........+||+ .|+|.+++.||.++.++|.+|.|..|+.+.+.|..
T Consensus 10 ~~kVLVvGDvmLDrY~~G~~~RISPEAPVPVv~v~~e~~rlGGA-aNVa~NiasLGa~a~l~GvvG~Deag~~L~~~l~~ 88 (467)
T COG2870 10 QAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEKEEERLGGA-ANVAKNIASLGANAYLVGVVGKDEAGKALIELLKA 88 (467)
T ss_pred CCcEEEEcceeeeeeccccccccCCCCCCceEEecccccccccH-HHHHHHHHHcCCCEEEEEeeccchhHHHHHHHHHh
Confidence 56899999999999986532 222 1455778999999 89999999999999999999999999999999999
Q ss_pred CCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc---hhhhcCccEEEEccccccCchhHHHHHH
Q 018696 100 NNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD---KNLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 100 ~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
.+|+.. +...++++|.+...+...+.+..-.-+ + ..........+. ...+.+++.+++|.+.-. ... -...
T Consensus 89 ~~i~~~-l~~~~~r~T~~K~Rv~s~nQQllRvD~-E-e~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG--~L~-~~q~ 162 (467)
T COG2870 89 NGIDSD-LLRDKNRPTIVKLRVLSRNQQLLRLDF-E-EKFPIEDENKLLEKIKNALKSFDALVLSDYAKG--VLT-NVQK 162 (467)
T ss_pred cCcccc-eEeecCCCceeeeeeecccceEEEecc-c-ccCcchhHHHHHHHHHHHhhcCCEEEEeccccc--cch-hHHH
Confidence 999955 556778899999988764443222211 1 111111111111 356789999999987521 111 1567
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh-HHHHHHHh-cCCCeEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD-NVVLEKLF-HPNLKLLI 254 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~-~~~~~~l~-~~g~~~vv 254 (351)
+++.|++.++++.+||-... .+.+..+.++.||..|++...|....++. .+..++|. +.+...++
T Consensus 163 ~I~~ar~~~~pVLvDPKg~D-------------f~~Y~GAtLiTPN~~E~~~~vg~~~~e~el~~~g~kL~~~~~L~alL 229 (467)
T COG2870 163 MIDLAREAGIPVLVDPKGKD-------------FEKYRGATLITPNLKEFEEAVGKCKSEEELEERGQKLKEELDLSALL 229 (467)
T ss_pred HHHHHHHcCCcEEECCCCcc-------------hhhhCCCeecCCCHHHHHHHHcccccHHHHHHHHHHHHHhhCcceEE
Confidence 89999999999999996431 23467999999999999999998876542 33345555 47889999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||++++|+.+++.++..|+|+...++-|.|||||+-+|.|.++++.|.+ +++|..+||+||+..+...|+.
T Consensus 230 vTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-------~~eAc~lAN~AagiVVgKlGTa-- 300 (467)
T COG2870 230 VTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-------LEEACELANAAAGIVVGKLGTA-- 300 (467)
T ss_pred EEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-------HHHHHHHhhhhcceEEeeccce--
Confidence 9999999999998888999999999999999999999999999999999 9999999999999999999974
Q ss_pred CCCHHHHHH
Q 018696 335 LPTKEAALK 343 (351)
Q Consensus 335 ~~~~~~v~~ 343 (351)
..+.+|+..
T Consensus 301 tvs~~EL~n 309 (467)
T COG2870 301 TVSPEELEM 309 (467)
T ss_pred eecHHHHHh
Confidence 467888776
|
|
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=197.71 Aligned_cols=279 Identities=21% Similarity=0.275 Sum_probs=210.0
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+..|+++|.+.+|++-.++..|.+ +..+-...-||.+.|++.+|+.||.+|.++|.+......+++++.|++.|||
T Consensus 4 ~k~VLcVG~~~lD~iTivd~~~fe~~~~r~~~g~wqRgG~asNvcTvlrlLG~~cef~Gvlsr~~~f~~lLddl~~rgId 83 (308)
T KOG2947|consen 4 PKQVLCVGCTVLDVITIVDKYPFEDSEIRCLSGRWQRGGNASNVCTVLRLLGAPCEFFGVLSRGHVFRFLLDDLRRRGID 83 (308)
T ss_pred cceEEEeccEEEEEEEeccCCCCCccceehhhhhhhcCCCcchHHHHHHHhCCchheeeecccchhHHHHHHHHHhcCCC
Confidence 457999999999999877766654 3345678899999999999999999999999999888999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
+++.......+...++++....|.|++.++ ..+....+.+++..-.+.+..|+|+.+.. +.+.+ +++....+
T Consensus 84 ishcpftd~~pp~ssiI~~r~s~trTil~~--dks~p~vT~~dF~kvdl~qy~WihfE~Rn-----p~etl-kM~~~I~~ 155 (308)
T KOG2947|consen 84 ISHCPFTDHSPPFSSIIINRNSGTRTILYC--DKSLPDVTATDFEKVDLTQYGWIHFEARN-----PSETL-KMLQRIDA 155 (308)
T ss_pred cccCccccCCCCcceEEEecCCCceEEEEe--cCCCccccHHHhhhcccceeeeEEEecCC-----hHHHH-HHHHHHHH
Confidence 999988877565555555556777887776 44556678888776678999999998753 33333 22322222
Q ss_pred --------cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCC-eEEE
Q 018696 184 --------SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL-KLLI 254 (351)
Q Consensus 184 --------~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~-~~vv 254 (351)
.++.+++|... .++.+..++...|+++.+.+=++.+.=....+..+.+..+..+-+. +.+|
T Consensus 156 ~N~r~pe~qrI~vSvd~en----------~req~~~l~am~DyVf~sK~~a~~~gfks~rea~~~l~~r~~~~~pkpv~I 225 (308)
T KOG2947|consen 156 HNTRQPEEQRIRVSVDVEN----------PREQLFQLFAMCDYVFVSKDVAKHLGFKSPREACEGLYGRVPKGKPKPVLI 225 (308)
T ss_pred hhcCCCccceEEEEEEecC----------cHHHHHHHhhcccEEEEEHHHHhhhccCCHHHHHHHHHhhcccCCCCcEEE
Confidence 34667777632 2456677889999999998877765322222222222222222233 3678
Q ss_pred EeeCCcceEEEe-cCceeeecCcc-cccccCCCCchHHHHHHHHHH-HhcCCcccchHHHHHHHHHHHHHHhHHhcccCC
Q 018696 255 VTEGSKGCRYYT-KEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCL-AADQNLIKDENRLREALLFANACGALTVTERGA 331 (351)
Q Consensus 255 vt~G~~G~~~~~-~~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l-~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~ 331 (351)
+.++.+|+-... +++.+++++++ .++||+.|+||+|.|||+|++ .++.+ +.||+.||+++|+.++...|.
T Consensus 226 ~~w~~eGA~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-------l~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 226 CPWASEGAGALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-------LAEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred eccccccccccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-------HHHHHHHHHHhhhcccccccc
Confidence 889999986654 55778899985 589999999999999999995 55776 999999999999999988875
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=205.41 Aligned_cols=189 Identities=31% Similarity=0.427 Sum_probs=158.3
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+++|++++|+++.++..|.. +.......+||.|.|+|.+|++||.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~LG~~~~~~~----------------------- 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLVG----------------------- 57 (196)
T ss_pred CEEEEccceEEEEEEeccCCCCCCeEEeceeeecCCCcHHHHHHHHHHCCCcEEEEE-----------------------
Confidence 4899999999999998876654 3557789999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
++++|+++.... .+...++++.+++.+
T Consensus 58 -------------------------------------------------~~~v~i~~~~~~----~~~~~~~~~~~~~~~ 84 (196)
T cd00287 58 -------------------------------------------------ADAVVISGLSPA----PEAVLDALEEARRRG 84 (196)
T ss_pred -------------------------------------------------ccEEEEecccCc----HHHHHHHHHHHHHcC
Confidence 788888875321 356778888999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
.++++||......|.. ..+.++++++|++++|.+|++.+++....+ +..+.++++.+.+++.+++|.|++|++
T Consensus 85 ~~v~~D~~~~~~~~~~-----~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~ 159 (196)
T cd00287 85 VPVVLDPGPRAVRLDG-----EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAI 159 (196)
T ss_pred CeEEEeCCcccccccc-----chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHHHhcCCCEEEEEECCCccE
Confidence 9999999876544421 125677899999999999999999875543 223467788889999999999999999
Q ss_pred EEe-cCceeeecCcccccccCCCCchHHHHHHHHHHH
Q 018696 264 YYT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA 299 (351)
Q Consensus 264 ~~~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~ 299 (351)
++. +++.+++|+++++++|++||||+|+|||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 160 VATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred EEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 998 777888998888999999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=156.90 Aligned_cols=225 Identities=16% Similarity=0.185 Sum_probs=150.0
Q ss_pred CeEEEeecCCChHHHH-HHHHHHH---CCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhh
Q 018696 77 SSAFVGKLGDDEFGYM-LANILKE---NNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLI 152 (351)
Q Consensus 77 ~v~~v~~vG~D~~g~~-i~~~l~~---~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i 152 (351)
+..+++.-|.|+.|-. +...++- +|+ .+..+.+++...+..|. .+.. .....+ .++++ .+
T Consensus 3 ~~~vl~iag~d~~ggaG~~aD~~~~~~~~~--------~~~~~~t~~t~~~~~G~-~v~~----~~~~~l-~~~l~--~l 66 (253)
T PRK12413 3 TNYILAISGNDIFSGGGLHADLATYTRNGL--------HGFVAVTCLTAMTEKGF-EVFP----VDKEIF-QQQLD--SL 66 (253)
T ss_pred CCeEEEEeeeCCCCHHHHHHHHHHHHHcCC--------ccCeeeEEEecccCCce-EEEE----CCHHHH-HHHHH--Hh
Confidence 3466888888876533 5555543 333 24455566555566663 3221 111111 12221 12
Q ss_pred cCcc--EEEEccccccCchhHHHHHHHHHHHH-HcCCeEEEcCCCCCCCCC--CHHHHHHHHHHhhhcCcEEEeCHHHHh
Q 018696 153 KQGS--IFHYGSISLIAEPCRSTQLAAMNLAK-ESGSILSYDPNLRLPLWP--SEEAAREGIMSIWDQADIIKVSDDEIT 227 (351)
Q Consensus 153 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~v~~d~~~~~~~~~--~~~~~~~~~~~~l~~~dvl~~N~~E~~ 227 (351)
...+ .+.++.+ . ..+....+++..+ +.+.++++||.++...|. +.+...+.+.++++++|++++|+.|++
T Consensus 67 ~~~~~~~i~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~ 141 (253)
T PRK12413 67 KDVPFSAIKIGLL--P---NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAE 141 (253)
T ss_pred hCCCCCEEEECCc--C---CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHH
Confidence 2333 3333332 1 1233444444444 468899999998887773 345566677778999999999999999
Q ss_pred hhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 228 FLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 228 ~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
.++|.... ++..++++++.+.|++.|+||.|++| ..++..++..+++.+++..+|++||||+|.|+|++++++
T Consensus 142 ~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~ 221 (253)
T PRK12413 142 LLSGKEIKTLEDMKEAAKKLYDLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVK 221 (253)
T ss_pred HHhCcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHc
Confidence 99996543 23445678888999999999999864 223333444455666777899999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|.++...++++.
T Consensus 222 g~~-------l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 222 GKS-------PLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999988888764
|
|
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-19 Score=155.58 Aligned_cols=167 Identities=21% Similarity=0.106 Sum_probs=130.3
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHc--CCeEEEcCCCCC--CCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHh
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKES--GSILSYDPNLRL--PLWPSEEAAREGIMSIWD-QADIIKVSDDEIT 227 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~~~--~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~ 227 (351)
...+++..+. +......+.+.++++.++++ +.++++||.... .+|...++..+.+.+++. ++|++++|..|++
T Consensus 71 ~~~~~v~~G~--l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~ 148 (254)
T cd01173 71 LEYDAVLTGY--LGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELE 148 (254)
T ss_pred ccCCEEEEec--CCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHH
Confidence 4567765443 23455678888899998887 899999997532 344334556677777777 9999999999999
Q ss_pred hhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc------ceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHH
Q 018696 228 FLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK------GCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 228 ~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l 298 (351)
.+++.... ++..+.++++.+.|++.|+||.|.. |++++.+++.++++.+.++ ++|++|+||+|.|+|++++
T Consensus 149 ~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l 228 (254)
T cd01173 149 LLTGKKINDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARL 228 (254)
T ss_pred HHcCCCcCCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHH
Confidence 99997543 3445567888899999999999985 7887776655555555455 7999999999999999999
Q ss_pred HhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 299 AADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++|++ +++|+++|++....+++.
T Consensus 229 ~~g~~-------~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 229 LKGKS-------LAEALEKALNFVHEVLEA 251 (254)
T ss_pred HcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999 999999999998877754
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-18 Score=152.38 Aligned_cols=226 Identities=17% Similarity=0.115 Sum_probs=151.7
Q ss_pred EEEeecCCChHHHH-H---HHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcC
Q 018696 79 AFVGKLGDDEFGYM-L---ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQ 154 (351)
Q Consensus 79 ~~v~~vG~D~~g~~-i---~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 154 (351)
.+++.-|.|+.|-. + ...++..|++.- +..+++...+..+......+ +... .+-.+++ ...+++
T Consensus 3 ~vl~iag~D~sggaGi~aD~~t~~~lg~~~~--------~v~Ta~t~q~~~~~~~~~v~--~~~~-~~i~~q~-~~l~~d 70 (268)
T PRK12412 3 KALTIAGSDTSGGAGIQADLKTFQELGVYGM--------TSLTTIVTMDPHNGWAHNVF--PIPA-STLKPQL-ETTIEG 70 (268)
T ss_pred eEEEEEeeCCCchHHHHHHHHHHHHcCCeec--------eeeeEEEeEcCCCCcEEEEE--eCCH-HHHHHHH-HHHHhC
Confidence 35677777766532 3 345566776533 23334444433333222222 2111 1112222 233444
Q ss_pred --ccEEEEccccccCchhHHHHHHHHHHHHHcCCe-EEEcCCCCCCC---CCCHHHHHHHHHHhhhcCcEEEeCHHHHhh
Q 018696 155 --GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRLPL---WPSEEAAREGIMSIWDQADIIKVSDDEITF 228 (351)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~~~---~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 228 (351)
.+.+.++.+. ..+....+.+.+++.+.+ +++||...... ....+........+++++|++++|..|++.
T Consensus 71 ~~~~~ikiG~l~-----~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~ 145 (268)
T PRK12412 71 VGVDALKTGMLG-----SVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQ 145 (268)
T ss_pred CCCCEEEECCCC-----CHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHH
Confidence 6788777542 345666777777877776 99999753221 112222233445688999999999999999
Q ss_pred hcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcce------EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 229 LTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKGC------RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 229 l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G~------~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
|++.... ++..++++++.+.|++.|+||.|..|. +++.+++.++++.++++.+|++|+||+|+|+|+++|++
T Consensus 146 L~g~~~~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa~l~~ 225 (268)
T PRK12412 146 LSGVKINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITAELAK 225 (268)
T ss_pred HhCcCCCCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHHHHHC
Confidence 9986533 344567788989999999999998753 34555555678888889999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|++ +++|+++|.++...++..
T Consensus 226 g~~-------l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 226 GKP-------VKEAVKTAKEFITAAIRY 246 (268)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999999888876
|
|
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=154.86 Aligned_cols=168 Identities=19% Similarity=0.121 Sum_probs=130.5
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcC--CeEEEcCCCCCC---CCCCHHHHHHHHHHhhhcCcEEEeCHHHH
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRLP---LWPSEEAAREGIMSIWDQADIIKVSDDEI 226 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~ 226 (351)
+..++++..+. +.+....+.+.++++.+++.+ ..+++||..... .|...+........+++++|++++|..|+
T Consensus 72 l~~~~~v~~G~--l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea 149 (286)
T PRK05756 72 LGECDAVLSGY--LGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFEL 149 (286)
T ss_pred cccCCEEEECC--CCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHH
Confidence 34677664443 334456678888888888765 668999986652 34333333344455899999999999999
Q ss_pred hhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc--------ceEEEecCceeeecCccccc-ccCCCCchHHHHHHH
Q 018696 227 TFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK--------GCRYYTKEFKGRVPGVKTKA-VDTTGAGDSFVSGIL 295 (351)
Q Consensus 227 ~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~--------G~~~~~~~~~~~v~~~~~~~-vd~tGaGD~f~ag~~ 295 (351)
+.+++.... ++..++++++.+.|++.|+||.|.. |++++.+++.++++.+.++. +|++|+||+|+|+|+
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~ 229 (286)
T PRK05756 150 EWLSGRPVETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHH
Confidence 999986533 3444567888899999999999876 57777777677777777777 799999999999999
Q ss_pred HHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 296 NCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 296 ~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+++++|++ +++|+++|++.....++.
T Consensus 230 a~l~~g~~-------~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 230 ARLLQGGS-------LEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999988875
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-18 Score=150.19 Aligned_cols=163 Identities=19% Similarity=0.136 Sum_probs=127.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCC-eEEEcCCCCC----CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITF 228 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 228 (351)
+.+.+.++.+. ..+.+..+++.+++++. ++++||.... .++ +.+........+++++|++++|..|++.
T Consensus 67 ~~~aikiG~l~-----~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 140 (254)
T TIGR00097 67 PVDAAKTGMLA-----SAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLL-EEEAIEALRKRLLPLATLITPNLPEAEA 140 (254)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCC-CHHHHHHHHHhccccccEecCCHHHHHH
Confidence 45677776432 34667777888888888 6999997542 222 2222233345678999999999999999
Q ss_pred hcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCC----cce-EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 229 LTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGS----KGC-RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 229 l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~----~G~-~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
|++.... ++..+.+++|.+.|++.|+||.|. +|. +++.+++.++++.++++.+|++|+||+|.|+|++++++|
T Consensus 141 L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g 220 (254)
T TIGR00097 141 LLGTKIRTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKG 220 (254)
T ss_pred HhCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCC
Confidence 9986533 234456788889999999999997 344 556677777888888999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 302 QNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
++ +++|+++|++++...++..
T Consensus 221 ~~-------l~eA~~~A~~~~~~~i~~~ 241 (254)
T TIGR00097 221 LS-------LKEAVKEAKEFVTGAIRYG 241 (254)
T ss_pred CC-------HHHHHHHHHHHHHHHHHHh
Confidence 99 9999999999999999763
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-18 Score=152.38 Aligned_cols=166 Identities=20% Similarity=0.179 Sum_probs=126.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC--CCCCC-HHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWPS-EEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~~~~-~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.++.++++.+ ......+.+.++++.+++.+.++++||+... .+|.. .+...+.+.++++++|++++|..|++.++
T Consensus 75 ~~~aik~G~l--~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 152 (284)
T PRK07105 75 KFDAIYSGYL--GSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLL 152 (284)
T ss_pred ccCEEEECcC--CCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHc
Confidence 6778877653 2333445666666666767899999998643 23431 23455667789999999999999999999
Q ss_pred CCCC------CChhHHHHHHHhcCCCeEEEEee-----CCcceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHH
Q 018696 231 GGDD------HNDDNVVLEKLFHPNLKLLIVTE-----GSKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNC 297 (351)
Q Consensus 231 ~~~~------~~~~~~~~~~l~~~g~~~vvvt~-----G~~G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~ 297 (351)
+... .++..++++++.+.|++.|+||. |..|++++.++ +.++++.+.+ .+|++|+||+|.|+|+++
T Consensus 153 g~~~~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~-~~~~~GaGD~f~aa~~~~ 231 (284)
T PRK07105 153 DKPYLEKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYI-PAHYPGTGDIFTSVITGS 231 (284)
T ss_pred CCCcCcCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeeccc-CCCcCChhHHHHHHHHHH
Confidence 8653 22344567888889999999999 67788887643 3444554444 489999999999999999
Q ss_pred HHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 298 LAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 298 l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+++|++ +++|+++|.+++...+++.
T Consensus 232 l~~g~~-------l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 232 LLQGDS-------LPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HhCCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999888864
|
|
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=146.70 Aligned_cols=163 Identities=17% Similarity=0.099 Sum_probs=124.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHc-CCeEEEcCCCCCCCC---CCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKES-GSILSYDPNLRLPLW---PSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~~~~~---~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
+.+++.++.+. ..+....+.+.+++. +.++++||......+ .+.+........+++++|++++|..|++.|
T Consensus 68 ~~~~i~~G~l~-----~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 142 (242)
T cd01169 68 PVDAIKIGMLG-----SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELL 142 (242)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHH
Confidence 56787775431 234555666666665 889999997653321 122223334456679999999999999999
Q ss_pred cCCCCCC--hhHHHHHHHhcCCCeEEEEeeCCcc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcC
Q 018696 230 TGGDDHN--DDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 230 ~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
++....+ +..++++++.+.|++.|+||.|++| .+++.+++.++++.++++++|++|+||+|.|+|++++++|.
T Consensus 143 ~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~ 222 (242)
T cd01169 143 TGLEIATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGL 222 (242)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCC
Confidence 9976432 3344677888899999999999875 35666667788888888899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 303 NLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+ +++|+++|++.....++.
T Consensus 223 ~-------~~~A~~~A~~~~~~~i~~ 241 (242)
T cd01169 223 S-------LEEAVREAKEYVTQAIRN 241 (242)
T ss_pred C-------HHHHHHHHHHHHHHHHHc
Confidence 9 999999999988776653
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-18 Score=152.50 Aligned_cols=167 Identities=18% Similarity=0.172 Sum_probs=124.9
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcC--CeEEEcCCCCCC---CCCCHHHHHHHH-HHhhhcCcEEEeCHHH
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRLP---LWPSEEAAREGI-MSIWDQADIIKVSDDE 225 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~~~~---~~~~~~~~~~~~-~~~l~~~dvl~~N~~E 225 (351)
+.++++++.+.+ ......+.+.++++.+++.+ ..+++||..... +|... ...+.+ ..+++++|++++|..|
T Consensus 72 ~~~~d~v~~G~l--~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~-~~~~~~~~~ll~~adii~pN~~E 148 (286)
T TIGR00687 72 LNQCDAVLSGYL--GSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAP-DLLEVYREKAIPVADIITPNQFE 148 (286)
T ss_pred cccCCEEEECCC--CCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeCh-hHHHHHHHhccccccEecCCHHH
Confidence 457888755543 34445678888888888765 678999965432 22222 334444 4588999999999999
Q ss_pred HhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEe-eCCcce--------EEEecCceeeecCcccc-cccCCCCchHHHHH
Q 018696 226 ITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVT-EGSKGC--------RYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSG 293 (351)
Q Consensus 226 ~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt-~G~~G~--------~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag 293 (351)
++.+++.... ++..++++.+++.|++.|+|| .|.+|+ +++.+++.++++.+.++ ++|++|+||+|+|+
T Consensus 149 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A~ 228 (286)
T TIGR00687 149 LELLTGRKINTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAAL 228 (286)
T ss_pred HHHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHHH
Confidence 9999996533 334456788888999999999 687775 44555556667766666 69999999999999
Q ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 294 ILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 294 ~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|++++++|++ +++|+++|+++...++..
T Consensus 229 ~l~~l~~g~~-------~~~al~~A~~~v~~~l~~ 256 (286)
T TIGR00687 229 LLATLLHGNS-------LKEALEKTVSAVYHVLVT 256 (286)
T ss_pred HHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999995544433
|
ThiD and related proteins form an outgroup. |
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=147.33 Aligned_cols=163 Identities=18% Similarity=0.169 Sum_probs=125.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCC-eEEEcCCCCC----CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITF 228 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 228 (351)
..+.+.++.+. ..+....+.+.+++.+. ++++||.... .++ +.+.......++++++|++++|..|++.
T Consensus 73 ~~~ai~iG~l~-----~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 146 (266)
T PRK06427 73 RIDAVKIGMLA-----SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLL-ADDAVAALRERLLPLATLITPNLPEAEA 146 (266)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCC-CHHHHHHHHHhhhCcCeEEcCCHHHHHH
Confidence 56777776532 24556666777777775 7999997543 222 2333333344688999999999999999
Q ss_pred hcCCCCCC--h-hHHHHHHHhcCCCeEEEEeeCC--cce----EEEecCceeeecCcccccccCCCCchHHHHHHHHHHH
Q 018696 229 LTGGDDHN--D-DNVVLEKLFHPNLKLLIVTEGS--KGC----RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA 299 (351)
Q Consensus 229 l~~~~~~~--~-~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~ 299 (351)
|++....+ + ..++++++.+.|++.||||.|+ +|. +++.+++.++++.++++.+|++|+||+|.|+|+++++
T Consensus 147 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~ 226 (266)
T PRK06427 147 LTGLPIADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELA 226 (266)
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHH
Confidence 99865322 2 3457788889999999999998 553 5666666677888888889999999999999999999
Q ss_pred hcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 300 ADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 300 ~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+|.+ +++|+++|++.+..++++.
T Consensus 227 ~g~~-------l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 227 KGAS-------LLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999888773
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=146.76 Aligned_cols=166 Identities=15% Similarity=0.142 Sum_probs=124.1
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHH--cCCeEEEcCCCCC---CCCCCHHHHHHHH-HHhhhcCcEEEeCHHH
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL---PLWPSEEAAREGI-MSIWDQADIIKVSDDE 225 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~---~~~~~~~~~~~~~-~~~l~~~dvl~~N~~E 225 (351)
+.+++.++++.+. +....+.+.+.++..+. .+.++++||.... ..|.+.+. .+.+ ..+++++|++++|..|
T Consensus 86 l~~~d~i~~G~l~--s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~-~~~~~~~Ll~~advitPN~~E 162 (281)
T PRK08176 86 LRQLRAVTTGYMG--SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDL-PEAYRQHLLPLAQGLTPNIFE 162 (281)
T ss_pred cccCCEEEECCCC--CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccH-HHHHHHHhHhhcCEeCCCHHH
Confidence 3478888887542 44445566666666554 4788999997443 24433332 3344 4588999999999999
Q ss_pred HhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-------eEEEecCceeeecCcccccccCCCCchHHHHHHHH
Q 018696 226 ITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-------CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 226 ~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
++.|+|.... ++..++++++.+.|++.||||.|+.| ++++.+++.+ ....+...+|++|+||+|.|+|++
T Consensus 163 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~GaGD~faa~~~a 241 (281)
T PRK08176 163 LEILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVN-VISHPRVDTDLKGTGDLFCAELVS 241 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceE-EEecCccCCCCCChhHHHHHHHHH
Confidence 9999996533 23445678899999999999999988 5666666544 344455567999999999999999
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 297 CLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++++|.+ +++|+++|+..-...++.
T Consensus 242 ~l~~g~~-------l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 242 GLLKGKA-------LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999888777754
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-17 Score=153.17 Aligned_cols=151 Identities=21% Similarity=0.199 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEcCCCCC----CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHH
Q 018696 170 CRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLE 243 (351)
Q Consensus 170 ~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~ 243 (351)
..+.+..+++.+++++.++++||..+. .+| ..+........+++++|++++|..|++.++|.... ++...+++
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~-~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~ 160 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLL-REDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAK 160 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCC-CHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 357788889999999999999997653 344 23333334467889999999999999999986532 34445677
Q ss_pred HHh-cCCCeEEEEeeCC----cce-EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHH
Q 018696 244 KLF-HPNLKLLIVTEGS----KGC-RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317 (351)
Q Consensus 244 ~l~-~~g~~~vvvt~G~----~G~-~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~ 317 (351)
+|. +.|++.|+||.|. +|+ +++.+++.++++.++++++|++|+||+|.|+|++++++|++ +++|+++
T Consensus 161 ~L~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~~-------l~eAl~~ 233 (448)
T PRK08573 161 YIVEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGLD-------PEEAIKT 233 (448)
T ss_pred HHHHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHH
Confidence 777 4899999999985 344 44556666788888889999999999999999999999999 9999999
Q ss_pred HHHHHhHHhcc
Q 018696 318 ANACGALTVTE 328 (351)
Q Consensus 318 a~~~Aa~~i~~ 328 (351)
|+.+...+++.
T Consensus 234 A~~~~~~al~~ 244 (448)
T PRK08573 234 AKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHH
Confidence 99999999883
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=141.96 Aligned_cols=163 Identities=18% Similarity=0.116 Sum_probs=122.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcC-CeEEEcCCCCCC---CCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP---LWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
..+.+.++.+. ..+....+.+.+++.+ .++++||..... .....+........+++++|++++|..|++.|
T Consensus 74 ~~~aikiG~l~-----s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L 148 (270)
T PRK12616 74 GVDAMKTGMLP-----TVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQL 148 (270)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHH
Confidence 45677766532 2345556666667665 469999986322 11122223333445788999999999999999
Q ss_pred cCC-CC--CChhHHHHHHHhcCCCeEEEEeeCCcce------EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 230 TGG-DD--HNDDNVVLEKLFHPNLKLLIVTEGSKGC------RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 230 ~~~-~~--~~~~~~~~~~l~~~g~~~vvvt~G~~G~------~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
++. .. .++..++++++.+.|++.|+||.|.+|. +++.+++.++++.+.++..+++|+||+|.|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~ 228 (270)
T PRK12616 149 SGMGEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (270)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 985 22 2344567788889999999999998752 55666666677888888899999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|.+ +++|+++|.......+..
T Consensus 229 g~~-------l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 229 GSE-------VKEAIYAAKEFITAAIKE 249 (270)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999999888876
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-15 Score=134.64 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=115.8
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcC--CeEEEcCCC--CCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNL--RLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~--~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
..+++..+.+. +....+.+.++++.+++.+ +++++||.. +..+|. .+...+.+.++++++|++++|+.|++.+
T Consensus 77 ~~~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~-~~~~~~~~~~ll~~~dii~pN~~E~~~L 153 (296)
T PTZ00344 77 DYTYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYV-KEEVVDAYRELIPYADVITPNQFEASLL 153 (296)
T ss_pred cCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEe-CHHHHHHHHHHhhhCCEEeCCHHHHHHH
Confidence 34555555432 3333455555666555554 589999865 334453 4567777888999999999999999999
Q ss_pred cCCCCC--ChhHHHHHHHhcCCCeEEEEe---eCCcc----eEEEe--c----CceeeecCcccccccCCCCchHHHHHH
Q 018696 230 TGGDDH--NDDNVVLEKLFHPNLKLLIVT---EGSKG----CRYYT--K----EFKGRVPGVKTKAVDTTGAGDSFVSGI 294 (351)
Q Consensus 230 ~~~~~~--~~~~~~~~~l~~~g~~~vvvt---~G~~G----~~~~~--~----~~~~~v~~~~~~~vd~tGaGD~f~ag~ 294 (351)
+|.... ++..++++++.+.|++.|||| .|..| +++.. . ++.+.+..+.++ ++++|+||+|.|+|
T Consensus 154 ~g~~~~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~ 232 (296)
T PTZ00344 154 SGVEVKDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALL 232 (296)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHH
Confidence 997533 234456788888899999999 55555 44432 1 234455555555 57799999999999
Q ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 295 LNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 295 ~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++.+++| + +++|+++|.+....+++.
T Consensus 233 ~a~l~~g-~-------~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 233 LAFSHQH-P-------MDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred HHHHhcC-C-------HHHHHHHHHHHHHHHHHH
Confidence 9888888 8 999999999888777665
|
|
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-15 Score=133.27 Aligned_cols=234 Identities=22% Similarity=0.302 Sum_probs=160.7
Q ss_pred EEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 31 VVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 31 i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
-+++|...+|.....+...+. ......+..||.+.|.|.++++||.++.+++++|+|.
T Consensus 343 Pv~vGa~i~D~~~k~d~d~K~dG~sy~~~~~Qa~GGVarN~A~a~~~lg~d~~liSavG~d~------------------ 404 (614)
T KOG3009|consen 343 PVSVGATIVDFEAKTDEDVKDDGGSYNGQVVQAMGGVARNHADALARLGCDSVLISAVGDDN------------------ 404 (614)
T ss_pred ceeecceEEEeEEeecccccccCCcccchhhhhccchhhhHHHHHHHhcCCeeEEEEeccCC------------------
Confidence 399999999999888764432 2335678999999999999999999999999999992
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+++ +++..+.. +. +...+++ +++++.+++ +.+.....++++ ++++..
T Consensus 405 ------------------n~~----~~~~~~~~--~~--e~~~dl~-~a~~I~~Ds-----NiS~~~Ma~il~-ak~~k~ 451 (614)
T KOG3009|consen 405 ------------------NGH----FFRQNSHK--IV--ESNEDLL-SADFILLDS-----NISVPVMARILE-AKKHKK 451 (614)
T ss_pred ------------------cch----hhhhhhhh--hh--hhhhhhh-cCCEEEEcC-----CCCHHHHHHHHH-hhhccC
Confidence 111 00001111 10 1112233 788887765 345567777777 899999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHhhhcCCCC-------C---ChhHHHHH---HHhcCCCeE
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITFLTGGDD-------H---NDDNVVLE---KLFHPNLKL 252 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l~~~~~-------~---~~~~~~~~---~l~~~g~~~ 252 (351)
+++|.|.... .....+..++ ..++.+++|..|+-....... . +...+.++ .........
T Consensus 452 ~V~fEPTd~~-------k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~~~~~~~~~~~k~~~~~s~ 524 (614)
T KOG3009|consen 452 QVWFEPTDID-------KVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADGVLELIEKEKTKLLLNTSI 524 (614)
T ss_pred ceEecCCCch-------hhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchHHHHHHHHHHHHhhcccce
Confidence 9999996432 2333444332 368999999999854322111 1 11112222 223356678
Q ss_pred EEEeeCCcceEEEecC-----ceeeecCccc--ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHH
Q 018696 253 LIVTEGSKGCRYYTKE-----FKGRVPGVKT--KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALT 325 (351)
Q Consensus 253 vvvt~G~~G~~~~~~~-----~~~~v~~~~~--~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~ 325 (351)
+++|.-.+|++...++ +....|++.. ++++..|+||+|.++|+++++++.+ +.+++.-+..|+..-
T Consensus 525 ~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~-------v~es~~gg~~~~ral 597 (614)
T KOG3009|consen 525 FIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT-------VVESLQGGQECARAL 597 (614)
T ss_pred EEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc-------hHhhccccHHHHHHH
Confidence 9999999999887655 3444555543 7999999999999999999999999 999999997776665
Q ss_pred hccc
Q 018696 326 VTER 329 (351)
Q Consensus 326 i~~~ 329 (351)
++..
T Consensus 598 ls~s 601 (614)
T KOG3009|consen 598 LSTS 601 (614)
T ss_pred Hhcc
Confidence 5543
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=137.71 Aligned_cols=164 Identities=17% Similarity=0.133 Sum_probs=123.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCe-EEEcCCCCC---CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRL---PLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
..+.+.++.+. ..+.+..+++.+++.+.+ +++||.... ..+.+.+.......++++++|+++||..|++.|
T Consensus 78 ~~~aik~G~l~-----~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L 152 (502)
T PLN02898 78 PVDVVKTGMLP-----SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASAL 152 (502)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHH
Confidence 35666666532 256667777777777775 999996422 122222222223346889999999999999999
Q ss_pred cCCCC---CChhHHHHHHHhcCCCeEEEEeeCCcc------eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 230 TGGDD---HNDDNVVLEKLFHPNLKLLIVTEGSKG------CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 230 ~~~~~---~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
++... .++..+.++++.+.|++.|+||.|..+ .+++.+++.++++.++++.+|++|+||+|.|+|++++++
T Consensus 153 ~g~~~~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~~ 232 (502)
T PLN02898 153 LGGDPLETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELAK 232 (502)
T ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHHc
Confidence 97532 234455678888999999999999753 255565566778888888899999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|......++.+.
T Consensus 233 G~~-------l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 233 GSD-------MLSAVKVAKRYVETALEYS 254 (502)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999764
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=137.65 Aligned_cols=149 Identities=16% Similarity=0.128 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEcCCCC----CCCCCC--HHHHHHHH-HHhhhcCcEEEeCHHHHhhhcCCCC---CChhHH
Q 018696 171 RSTQLAAMNLAKESGSILSYDPNLR----LPLWPS--EEAAREGI-MSIWDQADIIKVSDDEITFLTGGDD---HNDDNV 240 (351)
Q Consensus 171 ~~~~~~~~~~a~~~~~~v~~d~~~~----~~~~~~--~~~~~~~~-~~~l~~~dvl~~N~~E~~~l~~~~~---~~~~~~ 240 (351)
.+.+..+.+.++ +.++++||... ..++.. .+...+.+ ..+++++|+++||..|++.|+|... .++...
T Consensus 311 ~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L~g~~~~~~~~~~~~ 388 (504)
T PTZ00347 311 ARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAERILGRKEITGVYEARA 388 (504)
T ss_pred HHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHHHHhCCCCCCCHHHHHH
Confidence 455555555554 57899999764 222221 11122233 3678999999999999999999642 223445
Q ss_pred HHHHHhcCCCeEEEEeeCCcc-------eEEEec--CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHH
Q 018696 241 VLEKLFHPNLKLLIVTEGSKG-------CRYYTK--EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRL 311 (351)
Q Consensus 241 ~~~~l~~~g~~~vvvt~G~~G-------~~~~~~--~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~ 311 (351)
+++.+.+.|++.||||.|..| .+++.+ ++.++++.++++++|++|+||+|+|+|++++++|.+ +
T Consensus 389 aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~fsaaiaa~la~G~~-------l 461 (504)
T PTZ00347 389 AAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCTLASAISSFLARGYT-------V 461 (504)
T ss_pred HHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHHHHHHHHHHHhCCCC-------H
Confidence 678888899999999999863 334442 356778888888999999999999999999999999 9
Q ss_pred HHHHHHHHHHHhHHhcc
Q 018696 312 REALLFANACGALTVTE 328 (351)
Q Consensus 312 ~~a~~~a~~~Aa~~i~~ 328 (351)
++|+++|.+.-...+..
T Consensus 462 ~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 462 PDAVERAIGYVHEAIVR 478 (504)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999998888877765
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-13 Score=124.66 Aligned_cols=163 Identities=17% Similarity=0.062 Sum_probs=116.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHH--cCCeEEEcCCCCC--CCCCCHHHHHHHHH-HhhhcCcEEEeCHHHHhhh
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL--PLWPSEEAAREGIM-SIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~--~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 229 (351)
++.+.++.+ .+....+.+.++++.++. .++++++||.... .+|... ...+.+. .+++++|++++|..|++.+
T Consensus 87 ~~ai~~G~l--~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~-~~~~~~~~~ll~~adiitPN~~Ea~~L 163 (308)
T PLN02978 87 YTHLLTGYI--GSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPP-ELVPVYREKVVPLATMLTPNQFEAEQL 163 (308)
T ss_pred cCEEEeccc--CCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCCh-hHHHHHHHHHHhhCCeeccCHHHHHHH
Confidence 566655432 244556778888888776 4578999998654 344333 4445554 5899999999999999999
Q ss_pred cCCCCCC--hhHHHHHHHhcCCCeEEEEeeCC-cceEEEec---------CceeeecCcccccccCCCCchHHHHHHHHH
Q 018696 230 TGGDDHN--DDNVVLEKLFHPNLKLLIVTEGS-KGCRYYTK---------EFKGRVPGVKTKAVDTTGAGDSFVSGILNC 297 (351)
Q Consensus 230 ~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~---------~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~ 297 (351)
+|....+ +..++++++.+.|++.||||.+. +|.+.... ++.+++..+.++.. ++|+||+|+|.+++.
T Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~ 242 (308)
T PLN02978 164 TGIRIVTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGW 242 (308)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHH
Confidence 9965332 33456788888999999998754 34332211 24556666666555 589999999988888
Q ss_pred HHhc-CCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 298 LAAD-QNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 298 l~~g-~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+++| .+ +++|++.|.......++.
T Consensus 243 l~~g~~~-------l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 243 SHKYPDN-------LDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HhcCCcC-------HHHHHHHHHHHHHHHHHH
Confidence 8887 68 999999998887766665
|
|
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-12 Score=111.88 Aligned_cols=162 Identities=17% Similarity=0.109 Sum_probs=124.9
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcC-CeEEEcCCCCCC---CCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP---LWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
..+.+-++.+. ..+.+..+.+..++++ .++++||....+ .....+.......+++++++++.||..|++.|
T Consensus 72 ~v~avKtGML~-----~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L 146 (263)
T COG0351 72 PVDAVKTGMLG-----SAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEAL 146 (263)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHH
Confidence 34556555432 3567777888888888 779999954221 12234444455558999999999999999999
Q ss_pred cCC-CC--CChhHHHHHHHhcCCCeEEEEeeCCcc----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcC
Q 018696 230 TGG-DD--HNDDNVVLEKLFHPNLKLLIVTEGSKG----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 230 ~~~-~~--~~~~~~~~~~l~~~g~~~vvvt~G~~G----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
+|. .. .++..++++.+.+.|++.|+||-|... -++|.++..+.++.+.++-.++.|+|++|.|++.+.|++|.
T Consensus 147 ~g~~~i~~~~d~~~a~~~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~ 226 (263)
T COG0351 147 SGLPKIKTEEDMKEAAKLLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGL 226 (263)
T ss_pred cCCCccCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCC
Confidence 995 32 334445567777899999999988743 35566667778888889999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhc
Q 018696 303 NLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
+ +++|++.|-..-..+++
T Consensus 227 ~-------l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 227 S-------LEEAVKKAKEFVTRAIR 244 (263)
T ss_pred C-------HHHHHHHHHHHHHHHHh
Confidence 9 99999999988888887
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.4e-13 Score=119.34 Aligned_cols=163 Identities=18% Similarity=0.159 Sum_probs=112.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCC---CCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLR---LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~---~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+. + .+....+.+..++.+.++++||... .......+........+++++|++.||..|++.|+
T Consensus 60 ~~~aikiG~l~--~---~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~ 134 (246)
T PF08543_consen 60 KFDAIKIGYLG--S---AEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLT 134 (246)
T ss_dssp C-SEEEE-S-S--S---HHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHH
T ss_pred cccEEEEcccC--C---chhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHh
Confidence 67787776532 2 2344444455555778999999643 12233444444444459999999999999999999
Q ss_pred CCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc----c---eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 231 GGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK----G---CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 231 ~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~----G---~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
+.... ++..+++++|+++|++.|+||-+.. + -+++.+++.+.+..+..+..+..|.||+|.|++++.|++|
T Consensus 135 g~~i~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~g 214 (246)
T PF08543_consen 135 GREINSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAKG 214 (246)
T ss_dssp TS--SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHcC
Confidence 95443 3445678999999999999998863 2 3344556666666655555789999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 302 QNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
.+ +++|++.|.......++.
T Consensus 215 ~~-------l~~Av~~A~~~v~~~i~~ 234 (246)
T PF08543_consen 215 YS-------LEEAVEKAKNFVRRAIKN 234 (246)
T ss_dssp SS-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999888777763
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-13 Score=130.31 Aligned_cols=159 Identities=18% Similarity=0.183 Sum_probs=112.2
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC----CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.+.+.++-+ .+....+.+.++++..+ +.++++||..+. .++ .+...+.+.++++++|++++|..|++.|+
T Consensus 99 ~~aikiG~l--~s~~~i~~v~~~l~~~~--~~~vVlDPv~~~~~G~~l~--~~~~~~~~~~Ll~~advItPN~~Ea~~Lt 172 (530)
T PRK14713 99 VDAVKIGML--GDAEVIDAVRTWLAEHR--PPVVVLDPVMVATSGDRLL--EEDAEAALRELVPRADLITPNLPELAVLL 172 (530)
T ss_pred CCEEEECCc--CCHHHHHHHHHHHHhCC--CCCEEECCcccCCCCCCCC--CHHHHHHHHHHhhhhheecCChHHHHHHh
Confidence 466666543 23333344555554332 346999997642 233 23456667789999999999999999999
Q ss_pred CCCC---CChhHHHHHHHhcCCCeEEEEeeCCc------ceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 231 GGDD---HNDDNVVLEKLFHPNLKLLIVTEGSK------GCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 231 ~~~~---~~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
|... .++...+++++.+.+...||||.|.. ++++..+++.++++.++++.++++|+||+|.|+|+++|++|
T Consensus 173 g~~~~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~G 252 (530)
T PRK14713 173 GEPPATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGRG 252 (530)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHCC
Confidence 9653 23334456777765556899998863 23333344467788888899999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHh
Q 018696 302 QNLIKDENRLREALLFANACGALTV 326 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i 326 (351)
.+ +++|+++|...-...+
T Consensus 253 ~~-------l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 253 GD-------WAAALRWATAWLHGAI 270 (530)
T ss_pred CC-------HHHHHHHHHHHHHHHH
Confidence 99 9999999997444444
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.9e-13 Score=133.49 Aligned_cols=161 Identities=14% Similarity=0.168 Sum_probs=119.5
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHc-CCeEEEcCCCCC----CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKES-GSILSYDPNLRL----PLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
.+.+.++.+. ..+....+.+.+++. +.++++||.... .++ + +...+.+.++++++|++++|..|++.|
T Consensus 311 ~~aiKiGmL~-----s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~-~-~~~~~~l~~Llp~adlItPN~~Ea~~L 383 (755)
T PRK09517 311 VDAVKLGMLG-----SADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLL-D-ADATEALRRLAVHVDVVTPNIPELAVL 383 (755)
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCC-C-HHHHHHHHHHhCcccCccCCHHHHHHH
Confidence 4666666431 235556666666664 467999996532 222 2 233455667899999999999999999
Q ss_pred cCCC---CCChhHHHHHHHhcCCCeEEEEeeCC------cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 230 TGGD---DHNDDNVVLEKLFHPNLKLLIVTEGS------KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 230 ~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~------~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
+|.. +.++..+.++++.+.+...||||.|. .++++..+++.++++.+.++.+|++|+||+|.|+|++++++
T Consensus 384 ~g~~~~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La~ 463 (755)
T PRK09517 384 CGEAPAITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIAA 463 (755)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHHC
Confidence 9853 22344455777776543479999983 46666655556788888899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|.+ +++|++.|.......+...
T Consensus 464 G~s-------l~eAv~~A~~~v~~~i~~a 485 (755)
T PRK09517 464 GES-------VEKALEWATRWLNEALRHA 485 (755)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhc
Confidence 999 9999999999888888653
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=114.01 Aligned_cols=160 Identities=16% Similarity=0.040 Sum_probs=113.9
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.+...+++.++.- +... +....+++.+++++.++++|+......... ... .+.+..++++||..|++.|+
T Consensus 74 ~~~~~d~v~ig~g-l~~~---~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~-----~~~-~~~~~~~iltPn~~E~~~L~ 143 (254)
T cd01171 74 LLERADAVVIGPG-LGRD---EEAAEILEKALAKDKPLVLDADALNLLADE-----PSL-IKRYGPVVLTPHPGEFARLL 143 (254)
T ss_pred hhccCCEEEEecC-CCCC---HHHHHHHHHHHhcCCCEEEEcHHHHHhhcC-----hhh-hccCCCEEECCCHHHHHHHh
Confidence 3567788877652 1111 566778888888899999998521100000 000 23567999999999999999
Q ss_pred CCCCCC---hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccc
Q 018696 231 GGDDHN---DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKD 307 (351)
Q Consensus 231 ~~~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~ 307 (351)
+....+ +..+.++++.+.+. .+||..|. +.+++++++.++++....+.++++|+||+|.|.+.+.+++|.+
T Consensus 144 g~~~~~~~~~~~~~a~~l~~~~~-~~vvlkG~-~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~---- 217 (254)
T cd01171 144 GALVEEIQADRLAAAREAAAKLG-ATVVLKGA-VTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS---- 217 (254)
T ss_pred CCChhhhhhHHHHHHHHHHHHcC-cEEEEcCC-CCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC----
Confidence 865322 22346677777764 45666775 5566665555667777788999999999998888888889999
Q ss_pred hHHHHHHHHHHHHHHhHHhccc
Q 018696 308 ENRLREALLFANACGALTVTER 329 (351)
Q Consensus 308 ~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+.+|+++|+.+.+.+.+..
T Consensus 218 ---~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 218 ---PLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888753
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.44 E-value=6e-12 Score=109.92 Aligned_cols=165 Identities=19% Similarity=0.088 Sum_probs=116.2
Q ss_pred hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHH
Q 018696 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEI 226 (351)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~ 226 (351)
.+.+++++.+++..- +..+...+.+...++.+++++.++++||..... +... .+.+.+++. .+|+|++|..|+
T Consensus 44 ~~~l~~~d~vvi~~G-~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~---~~~~-~~~~~~ll~~~~~~ilTPN~~Ea 118 (242)
T cd01170 44 EELAKIAGALVINIG-TLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGA---TSFR-TEVAKELLAEGQPTVIRGNASEI 118 (242)
T ss_pred HHHHHHcCcEEEeCC-CCChHHHHHHHHHHHHHHhcCCCEEEcccccCc---chhH-HHHHHHHHhcCCCeEEcCCHHHH
Confidence 356778888877532 223444566667777788889999999964321 1111 123344455 499999999999
Q ss_pred hhhcCCCC-----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHH
Q 018696 227 TFLTGGDD-----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGIL 295 (351)
Q Consensus 227 ~~l~~~~~-----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~ 295 (351)
..+++... .++....++++.+.+...|++| |.... ++++++.++++..+....+..|+||+|.|++.
T Consensus 119 ~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiA 196 (242)
T cd01170 119 AALAGLTGLGKGVDSSSSDEEDALELAKALARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHPLLTKITGTGCLLGAVIA 196 (242)
T ss_pred HHHhCCCCCcCcccCCCcchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCccccCCCchHHHHHHHHH
Confidence 99998643 2234456777776655568888 66665 55666677777655555667899999999999
Q ss_pred HHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 296 NCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 296 ~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
+.+++|.+ +.+|+..|...-+.+++
T Consensus 197 a~LA~g~~-------~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 197 AFLAVGDD-------PLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999999766666654
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.7e-11 Score=107.20 Aligned_cols=174 Identities=14% Similarity=0.052 Sum_probs=116.0
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.+..++++.+++- +... +.+.++++.+++.+.++++|+.. ..+.........++++++||..|++.|+
T Consensus 89 ~~~~~davvig~G-l~~~---~~~~~l~~~~~~~~~pvVlDa~g--------~~l~~~~~~~~~~~~vItPN~~El~~L~ 156 (272)
T TIGR00196 89 LLERYDVVVIGPG-LGQD---PSFKKAVEEVLELDKPVVLDADA--------LNLLTYDKPKREGEVILTPHPGEFKRLL 156 (272)
T ss_pred hhccCCEEEEcCC-CCCC---HHHHHHHHHHHhcCCCEEEEhHH--------HHHHhhcccccCCCEEECCCHHHHHHHh
Confidence 4567888888663 2222 22667788888889999999841 1111111111346899999999999999
Q ss_pred CCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccch
Q 018696 231 GGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308 (351)
Q Consensus 231 ~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~ 308 (351)
+.... ++..+.++++.+.. ..+|++.|..++++..++..+ +...+....+++|+||++.|.+.+.+++|.+
T Consensus 157 g~~~~~~~~~~~aa~~l~~~~-~~vVv~kG~~~~i~~~~~~~~-~~~~~~~~~~~~GaGD~lag~iaa~la~g~~----- 229 (272)
T TIGR00196 157 GLVNEIQGDRLEAAQDIAQKL-QAVVVLKGAADVIAAPDGDLW-INKTGNAALAKGGTGDVLAGLIGGLLAQNLD----- 229 (272)
T ss_pred CCchhhhhhHHHHHHHHHHHh-CCEEEEcCCCCEEEcCCCeEE-EECCCCCccCCCCchHHHHHHHHHHHhCCCC-----
Confidence 86532 23344567777653 458888999998665444444 4444567788999999966666666678998
Q ss_pred HHHHHHHHHH---HHHHhHHhcc-cCCCCCCCCHHHHHHHHhh
Q 018696 309 NRLREALLFA---NACGALTVTE-RGAIPALPTKEAALKLLHT 347 (351)
Q Consensus 309 ~~~~~a~~~a---~~~Aa~~i~~-~g~~~~~~~~~~v~~~l~~ 347 (351)
+.+|+..| ...|+..+.. .|..+ .+.+|+.+.+..
T Consensus 230 --~~~A~~~a~~~~~~a~~~~~~~~g~~~--~~~~dl~~~i~~ 268 (272)
T TIGR00196 230 --PFDAACNAAFAHGLAGDLALKNHGAYG--LTALDLIEKIPR 268 (272)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCCC--cCHHHHHHHHHH
Confidence 99999777 6777766544 35332 467777766543
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-10 Score=101.32 Aligned_cols=167 Identities=22% Similarity=0.162 Sum_probs=119.6
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHc--CCeEEEcCCCCC--CCCCCHHHHHHHHHHhhhcCcEEEeCHHHH
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES--GSILSYDPNLRL--PLWPSEEAAREGIMSIWDQADIIKVSDDEI 226 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~ 226 (351)
.+..+|.+..+. +........+.++++..++. .+.+++||.... .++...+.......++++.+|++.||..|+
T Consensus 70 ~~~~~davltGY--lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fEL 147 (281)
T COG2240 70 KLGECDAVLTGY--LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFEL 147 (281)
T ss_pred cccccCEEEEcc--CCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHH
Confidence 466778876554 34455667788888888886 566999995422 333333333333347899999999999999
Q ss_pred hhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc-----ceEEEecC---ceeeecCcccccccCCCCchHHHHHHHH
Q 018696 227 TFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-----GCRYYTKE---FKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 227 ~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~-----G~~~~~~~---~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
+.|+|.... +++.++++.|.+.|++.|+||.-.+ |..++... ..+|+- +.+ ..+++|.||.|+|.|++
T Consensus 148 e~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v-~~~~~GtGDL~sallla 225 (281)
T COG2240 148 EILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLV-PFIPNGTGDLFSALLLA 225 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcC-CCCCCCchHHHHHHHHH
Confidence 999998754 3445678888899999999996544 44444433 233333 222 23399999999999999
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 297 CLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
.+++|.+ .++++..+..+-...++.
T Consensus 226 ~lL~g~~-------~~~al~~~~~~V~evl~~ 250 (281)
T COG2240 226 RLLEGLS-------LTQALERATAAVYEVLQE 250 (281)
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999998887776663
|
|
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.7e-10 Score=99.76 Aligned_cols=162 Identities=12% Similarity=0.080 Sum_probs=106.8
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHc------CCeEEEcCCCCC---CCCCC-HHHHHHHHHHhhhcCcEEEeCHH
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKES------GSILSYDPNLRL---PLWPS-EEAAREGIMSIWDQADIIKVSDD 224 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~------~~~v~~d~~~~~---~~~~~-~~~~~~~~~~~l~~~dvl~~N~~ 224 (351)
.+++-++-+. + .+.+..+.+..+++ ..++++||.... ....+ .+......+.++++++++.||..
T Consensus 74 i~aIKiGmL~--s---~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~ 148 (321)
T PTZ00493 74 IDVVKLGVLY--S---KKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFY 148 (321)
T ss_pred CCEEEECCcC--C---HHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHH
Confidence 4667776432 2 23333333333333 224999996321 11112 22223344569999999999999
Q ss_pred HHhhhcC-----CC-CCChhHHHHHHHhc-CCCeEEEEeeCCcc----------e--EEEe-------c--------C--
Q 018696 225 EITFLTG-----GD-DHNDDNVVLEKLFH-PNLKLLIVTEGSKG----------C--RYYT-------K--------E-- 268 (351)
Q Consensus 225 E~~~l~~-----~~-~~~~~~~~~~~l~~-~g~~~vvvt~G~~G----------~--~~~~-------~--------~-- 268 (351)
|++.|++ .. ..++...++++|.+ +|++.|+||-|... + +++. + +
T Consensus 149 Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~ 228 (321)
T PTZ00493 149 ECKVILEALDCQMDLSKANMTELCKLVTEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGV 228 (321)
T ss_pred HHHHHhCCCcccCCCCHHHHHHHHHHHHHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccccccc
Confidence 9999997 21 22344556788876 79999999977631 1 2322 1 1
Q ss_pred ----ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 269 ----FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 269 ----~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+.+++....++..++.|.||+|.++++++|++|.+ +++|++.|...-..++..
T Consensus 229 ~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G~~-------l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 229 TYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKKHN-------ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 12345555556677899999999999999999999 999999998877777765
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.4e-09 Score=92.58 Aligned_cols=163 Identities=18% Similarity=0.121 Sum_probs=105.5
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEIT 227 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 227 (351)
+.++.++.+++.-- ...+...+.+...++.+++++.++++||...... . ...+...++++ ++++|++|..|+.
T Consensus 50 ~~~~~~~alvi~~G-~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~---~-~~~~~~~~ll~~~~~~vItPN~~E~~ 124 (263)
T PRK09355 50 EMAKIAGALVINIG-TLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT---S-YRTEFALELLAEVKPAVIRGNASEIA 124 (263)
T ss_pred HHHHhcCceEEeCC-CCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc---h-hhHHHHHHHHHhcCCcEecCCHHHHH
Confidence 44566676666332 2344444556667777888899999999643211 1 01122233333 6899999999999
Q ss_pred hhcCCCC----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHH
Q 018696 228 FLTGGDD----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 297 (351)
Q Consensus 228 ~l~~~~~----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~ 297 (351)
.|++... .++....++++.+.+...|++| |..- +++++++.+.++.-.....+.+|+||++.|.+.+.
T Consensus 125 ~L~g~~~~~~~vd~~~~~~~~~~~a~~la~~~~~~Vvvk-G~~d-~I~~~~~~~~~~~g~~~~~~v~GtGc~L~~~iaa~ 202 (263)
T PRK09355 125 ALAGEAAETKGVDSTDGSADAVEIAKAAAKKYGTVVVVT-GEVD-YITDGERVVSVHNGHPLMTKVTGTGCLLSAVVAAF 202 (263)
T ss_pred HHhCCCcccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEE-CCCc-EEEeCCEEEEEeCCCcccCCcccccHHHHHHHHHH
Confidence 9998542 1133445677777655567777 4433 33445555556533334455599999999999999
Q ss_pred HHhcCCcccchHHHHHHHHHHHHHHhHHh
Q 018696 298 LAADQNLIKDENRLREALLFANACGALTV 326 (351)
Q Consensus 298 l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i 326 (351)
++.|.+ +.+|+..|...-+.+-
T Consensus 203 lA~g~~-------~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 203 AAVEKD-------YLEAAAAACAVYGIAG 224 (263)
T ss_pred HhcCCC-------HHHHHHHHHHHHHHHH
Confidence 999998 8888888876555554
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-08 Score=88.77 Aligned_cols=162 Identities=16% Similarity=0.074 Sum_probs=101.7
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~ 228 (351)
.+..++.+.+.--.+ .+...+.+...++.+++++.|+++||..... +... .....++++ +++++.+|..|+..
T Consensus 46 ~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~---s~~r-~~~~~~Ll~~~~~~vITpN~~E~~~ 120 (249)
T TIGR00694 46 LAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGA---TKFR-TETALELLSEGRFAAIRGNAGEIAS 120 (249)
T ss_pred HHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEccccccc---chhH-HHHHHHHHhhcCCceeCCCHHHHHH
Confidence 345555554432222 3334566667777788889999999964322 1111 123344555 57999999999999
Q ss_pred hcCCCC----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH
Q 018696 229 LTGGDD----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 229 l~~~~~----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l 298 (351)
|++... .++....++++.+.+...|++| |..-. ++++++.+.+...+...-..+|.||++.+.+.+.+
T Consensus 121 L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~~~~Vllk-G~~D~-i~~~~~~~~~~~g~~~~~~~~GtGc~LssaIaa~L 198 (249)
T TIGR00694 121 LAGETGLMKGVDSGEGAADAIRAAQQAAQKYGTVVVIT-GEVDY-VSDGTSVYTIHNGTELLGKITGSGCLLGSVVAAFC 198 (249)
T ss_pred HhCCCCCCCCcCCccchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEeCCEEEEECCCChHHhCCccchHHHHHHHHHHH
Confidence 998541 1233445677776543356665 54443 45555555544333222225799999999999999
Q ss_pred HhcCCcccchHHHHHHHHHHHHHHhHHh
Q 018696 299 AADQNLIKDENRLREALLFANACGALTV 326 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~~Aa~~i 326 (351)
++|.+ +.+|+..|...-..+.
T Consensus 199 A~g~~-------~~~A~~~A~~~~~~a~ 219 (249)
T TIGR00694 199 AVEED-------PLDAAISACLLYKIAG 219 (249)
T ss_pred hcCCC-------HHHHHHHHHHHHHHHH
Confidence 99998 8899888875444443
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.6e-07 Score=80.33 Aligned_cols=164 Identities=16% Similarity=0.049 Sum_probs=115.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC---CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.++++-.+-+ ..+....++.+.+.+. .-.++++||.... ......+-..-..+++++.+|++.+|..|+-.|.
T Consensus 92 ~C~VvKTGML--~~~~I~~vi~q~l~~~--~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll 167 (523)
T KOG2598|consen 92 KCDVVKTGML--PSPEIVKVIEQSLQKF--NIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILL 167 (523)
T ss_pred cccEEeecCc--CchHHHHHHHHHHHhh--cCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHH
Confidence 5667666543 2333333444444432 2245899994321 1111223445567789999999999999999998
Q ss_pred CCCC--------CChhHHHHHHHhcCCCeEEEEeeCCcce-----------------EEEecCceeeecCcccccccCCC
Q 018696 231 GGDD--------HNDDNVVLEKLFHPNLKLLIVTEGSKGC-----------------RYYTKEFKGRVPGVKTKAVDTTG 285 (351)
Q Consensus 231 ~~~~--------~~~~~~~~~~l~~~g~~~vvvt~G~~G~-----------------~~~~~~~~~~v~~~~~~~vd~tG 285 (351)
+... ..+....++++.+.|++.|+|+.|.-.. +++.+++.+.++.+.+....+.|
T Consensus 168 ~~~~~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHG 247 (523)
T KOG2598|consen 168 KKEKREISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHG 247 (523)
T ss_pred hhcccCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccC
Confidence 8421 2344456788999999999999875321 34455677788888888899999
Q ss_pred CchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 286 AGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 286 aGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
.|.++.++.+..|++|.+ +.+|++.|...--.+++.
T Consensus 248 tgCtLaSAIASnLA~g~s-------l~qAv~~ai~yvq~Ai~~ 283 (523)
T KOG2598|consen 248 TGCTLASAIASNLARGYS-------LLQAVQGAIEYVQNAIAI 283 (523)
T ss_pred ccchHHHHHHHHHhhcCC-------HHHHHHHHHHHHHHHHHh
Confidence 999999999999999999 999999998776666654
|
|
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=73.72 Aligned_cols=160 Identities=21% Similarity=0.145 Sum_probs=98.4
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHc--CCeEEEcCCC--CCCCCCCHHHHHHHHHH-hhhcCcEEEeCHHHH
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES--GSILSYDPNL--RLPLWPSEEAAREGIMS-IWDQADIIKVSDDEI 226 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~--~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~ 226 (351)
+...+.+..+ + +........+.++++..++. +...++||.. ...++.+. +....-++ +.+.+|++.||..|+
T Consensus 79 ~~~Y~~vLTG-Y-~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~e-elipvYr~~i~~ladiiTPNqFE~ 155 (308)
T KOG2599|consen 79 LNKYDAVLTG-Y-LPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPE-ELIPVYRDLIIPLADIITPNQFEA 155 (308)
T ss_pred ccccceeeee-c-cCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccH-HHHHHHHHhhcchhhhcCCcchhh
Confidence 3455655433 3 22334456677777777775 4668889953 33455444 33334444 445699999999999
Q ss_pred hhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcce-----EEE---ecC-ceeeecCcccccccCCCCchHHHHHHH
Q 018696 227 TFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKGC-----RYY---TKE-FKGRVPGVKTKAVDTTGAGDSFVSGIL 295 (351)
Q Consensus 227 ~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G~-----~~~---~~~-~~~~v~~~~~~~vd~tGaGD~f~ag~~ 295 (351)
+.|+|.... +++.++++.|.++|++.||||...-|. ++. ..+ +.+.+.-+.+ .---||.||.|+|-++
T Consensus 156 EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki-~~~FtGTGDLfsaLLl 234 (308)
T KOG2599|consen 156 EILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKI-DGVFTGTGDLFSALLL 234 (308)
T ss_pred hhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEeccc-ceEEecccHHHHHHHH
Confidence 999997654 455567899999999999999765332 121 222 3333322222 2224899999999888
Q ss_pred HHHHhcCCcccchHHHHHHHHHHH
Q 018696 296 NCLAADQNLIKDENRLREALLFAN 319 (351)
Q Consensus 296 ~~l~~g~~~~~~~~~~~~a~~~a~ 319 (351)
+.+.+-.+ ..++..++....
T Consensus 235 a~~~~~~~----~~~l~~a~e~~l 254 (308)
T KOG2599|consen 235 AWLHESPD----NDDLSKAVEQVL 254 (308)
T ss_pred HHHhcCCC----cchHHHHHHHHH
Confidence 88776531 112555555444
|
|
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.2e-05 Score=69.52 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=53.5
Q ss_pred hhcCccEEEEccccccCch---------hHHHHHHHHHHHHH-cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEE
Q 018696 151 LIKQGSIFHYGSISLIAEP---------CRSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~ 220 (351)
.-..+|.+.++|+..+.+. ..+...+.++..++ .++++-+...+. .+.+-....+..+++++|.+-
T Consensus 206 i~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As~----~~~~l~~~i~~~ilp~vDSlG 281 (446)
T TIGR02045 206 IGEPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFASI----QNREIRKKVVTNIFPHVDSVG 281 (446)
T ss_pred hhhcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEeccc----ccHHHHHHHHHhhcccccccc
Confidence 3456899999999876543 12333444444433 678888887653 245556666778999999999
Q ss_pred eCHHHHhhhc
Q 018696 221 VSDDEITFLT 230 (351)
Q Consensus 221 ~N~~E~~~l~ 230 (351)
+|++|+..+.
T Consensus 282 MNE~ELa~ll 291 (446)
T TIGR02045 282 MDEAEIANVL 291 (446)
T ss_pred CCHHHHHHHH
Confidence 9999999876
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.5e-05 Score=70.50 Aligned_cols=164 Identities=16% Similarity=0.131 Sum_probs=89.3
Q ss_pred cccCCChHHHHHHHHHHcCCCe--EEEeecCCChHHHHHHHHHHH-CCCCCC------Cee------ecCCCCCeEEEEE
Q 018696 57 KKAPGGAPANVAVGISRLGGSS--AFVGKLGDDEFGYMLANILKE-NNVDTS------GVR------YDSTARTALAFVT 121 (351)
Q Consensus 57 ~~~~GG~~~n~a~~l~~lG~~v--~~v~~vG~D~~g~~i~~~l~~-~gid~~------~v~------~~~~~~t~~~~~~ 121 (351)
..+.||.+..+|..|+++|.++ .++..++.. . .+.|.+ .++-.- .+. +.++.++...+++
T Consensus 98 ~~rmGGqAgimAn~la~lg~~~vV~~~p~lsk~-q----a~lf~~~~~i~~P~~e~g~l~l~~p~e~~~~~d~~~IH~I~ 172 (463)
T PRK03979 98 EERMGGQAGIISNLLAILDLKKVIAYTPWLSKK-Q----AEMFVDSDNLLYPVVENGKLVLKKPREAYKPNDPLKINRIF 172 (463)
T ss_pred eEEeCChHHHHHHHHHhcCCceEEEeCCCCCHH-H----HHHhCCCCCeeeccccCCceeeccchhhccCCCCcceEEEE
Confidence 4589999999999999999884 445555542 2 334422 111100 000 0012233344444
Q ss_pred EecCCCc--------------eEEEecCCcccccCCccccchhhh----cCccEEEEccccccCch-----h----HHHH
Q 018696 122 LRADGER--------------EFLFFRHPSADMLLCESELDKNLI----KQGSIFHYGSISLIAEP-----C----RSTQ 174 (351)
Q Consensus 122 ~~~~g~~--------------~~~~~~~~~~~~~~~~~~i~~~~i----~~~~~~~~~~~~~~~~~-----~----~~~~ 174 (351)
..+.|.+ +++..+++........+++ .+.+ ...|.+.++|+..+.+. . .+..
T Consensus 173 Ey~~G~~~~l~~~~~~aPRaNRfI~s~D~~n~~l~~~eef-~~~L~ei~~~~D~avlSG~q~i~~~y~dg~~~~~~l~r~ 251 (463)
T PRK03979 173 EFKKGLEFKLGGEKIIVPRSNRFIVSSRPEWLRIEIKDEL-KEFLPEIGKMVDGAILSGYQGIKEEYSDGKTAEYYLKRA 251 (463)
T ss_pred EeCCCCEEEecCccEecCCCCeEEEecCCCCccceecHHH-HHHHHhhccCCCEEEEechhhhhccccccccHHHHHHHH
Confidence 3344432 2232222211111111222 1223 45899999999876552 1 1222
Q ss_pred HHHHHHH--HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 175 LAAMNLA--KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 175 ~~~~~~a--~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.+.++.. ...++++-+...+.. +.+-....+..+++++|.+-+|++|+..+.
T Consensus 252 ~~~i~~L~~~~~~i~iH~E~As~~----~~~ir~~i~~~ilp~vDSlGmNE~ELa~l~ 305 (463)
T PRK03979 252 KEDIKLLKKKNKDIKIHVEFASIQ----NREIRKKIITYILPHVDSVGMDETEIANIL 305 (463)
T ss_pred HHHHHHHhhCCCCceEEEEecccc----CHHHHHHHHHhhccccccccCCHHHHHHHH
Confidence 3333333 234788888876542 455556667789999999999999999654
|
|
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00015 Score=67.89 Aligned_cols=194 Identities=16% Similarity=0.141 Sum_probs=103.2
Q ss_pred ccccCCChHHHHHHHHHHcCCCeEE-EeecCCChHHHHHHHHHHHCCCCCCCe-----e-------ecCCCCCeEEEEEE
Q 018696 56 FKKAPGGAPANVAVGISRLGGSSAF-VGKLGDDEFGYMLANILKENNVDTSGV-----R-------YDSTARTALAFVTL 122 (351)
Q Consensus 56 ~~~~~GG~~~n~a~~l~~lG~~v~~-v~~vG~D~~g~~i~~~l~~~gid~~~v-----~-------~~~~~~t~~~~~~~ 122 (351)
...+.||.+..+|..|+++|.++.+ .+..-+ +...+.|....|-.-.+ . .....+....+++-
T Consensus 86 ~~~rmGGnAgimAn~la~lg~~~Vi~~~~~ls----k~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~d~IH~IfE 161 (453)
T PRK14039 86 SEIRMGGNAGIMANVLSELGASRVVPNVAVPS----KTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQEPIHFVFD 161 (453)
T ss_pred ceEEeCChHHHHHHHHHhcCCceEEEcCCCCC----HHHHHhcCCCCEEeccccccccccCccccccccCCCCCceEEEE
Confidence 4689999999999999999999655 333222 22233442222111100 0 00011233333333
Q ss_pred ecCCC--------------ceEEEecCCcccccCCccccch---hhhcCccEEEEccccccCch------hHHHHHH---
Q 018696 123 RADGE--------------REFLFFRHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAEP------CRSTQLA--- 176 (351)
Q Consensus 123 ~~~g~--------------~~~~~~~~~~~~~~~~~~~i~~---~~i~~~~~~~~~~~~~~~~~------~~~~~~~--- 176 (351)
...|. ++++...++........+.+.. +.....|.+.++|+..+.+. ..+.+.+
T Consensus 162 y~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~e~l~~~~~ 241 (453)
T PRK14039 162 FREGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYREKLEDSLA 241 (453)
T ss_pred eCCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHHHHHHHHHH
Confidence 33332 2233222211111111222211 22237899999999876332 1223333
Q ss_pred HHHHHH--HcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC----------CChhHHHHHH
Q 018696 177 AMNLAK--ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD----------HNDDNVVLEK 244 (351)
Q Consensus 177 ~~~~a~--~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~----------~~~~~~~~~~ 244 (351)
.++..+ ..++++-+...+. .+.+-....+..+++++|.+-+|++|+..+..... .++..+.+..
T Consensus 242 ~i~~l~~~~~~i~iH~E~As~----~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g~~~~~i~~~~~~~v~ea~~~ 317 (453)
T PRK14039 242 QLKWWKSKNEKLRIHAELGHF----ASKEIANSVFLILAGIVDSIGMNEDELAMLANLHGIPAEGILEMNAEAIGEAACQ 317 (453)
T ss_pred HHHHHHhcCCCceEEEEecCc----ccHHHHHHHHHHhhcccccccCCHHHHHHHHHHcccchhhHhhcCHHHHHHHHHH
Confidence 333332 2457888887653 34556667777899999999999999998765421 2222234445
Q ss_pred Hh-cCCCeEEEEee
Q 018696 245 LF-HPNLKLLIVTE 257 (351)
Q Consensus 245 l~-~~g~~~vvvt~ 257 (351)
|. +.|.+.+.|..
T Consensus 318 l~~~~~le~l~vHT 331 (453)
T PRK14039 318 LASESGLQRLIIHT 331 (453)
T ss_pred HHHHcCCCEEEEEe
Confidence 55 46887766654
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0014 Score=56.83 Aligned_cols=157 Identities=18% Similarity=0.135 Sum_probs=93.7
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh--hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~~ 228 (351)
..+.++.+.+.--+ +.+...+.+....+.+++.++|+++||.--.. ..-..+...+++ .++++++.|..|...
T Consensus 46 ~~~~a~al~iNiGT-l~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa----s~~R~~~~~~LL~~~~~~vIrGN~sEI~a 120 (246)
T PF02110_consen 46 FASIADALVINIGT-LTDERIEAMKKAAKAANELGIPVVLDPVGVGA----SKFRTEFALELLNNYKPTVIRGNASEIAA 120 (246)
T ss_dssp HHHCTSEEEEESTT-SSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT----BHHHHHHHHHHHCHS--SEEEEEHHHHHH
T ss_pred HHHHcCEEEEECCC-CCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC----cHHHHHHHHHHHHhCCCcEEEeCHHHHHH
Confidence 34445555432111 23445678888999999999999999954321 122345556666 589999999999999
Q ss_pred hcCCCCC---------C-hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH
Q 018696 229 LTGGDDH---------N-DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 229 l~~~~~~---------~-~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l 298 (351)
|.+.... + +....++.+.++- +.+|+-.|+.... .++.+.+.++--..-.-.-||.|+...+-+.+.+
T Consensus 121 Lag~~~~~kGVDs~~~~~~~~~~a~~lA~k~-~~vVvvTG~~D~I-sdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf~ 198 (246)
T PF02110_consen 121 LAGEDSKAKGVDSGDSDEDAIEAAKQLAQKY-NCVVVVTGEVDYI-SDGNRVYRIPNGSPLLSKITGTGCMLGALIAAFL 198 (246)
T ss_dssp HHTCCCCSCSSSSSCGSHHHHHHHHHHHHHT-TSEEEEESSSEEE-EESSCEEEECSSSGGGGGSTTHHHHHHHHHHHHH
T ss_pred HhCcCCCCCCcCcCCcchHHHHHHHHHHHhc-CCEEEEecCCcEE-ECCCeEEEeCCCChHhcceeccchHHHHHHHHHH
Confidence 9875421 1 1234455655433 2366666777664 3455566666555455667999988877766666
Q ss_pred HhcCCcccchHHHHHHHHHHHHH
Q 018696 299 AADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
....+ +..+...|...
T Consensus 199 av~~d-------~~~aa~~a~~~ 214 (246)
T PF02110_consen 199 AVAED-------PLEAAVAAVAL 214 (246)
T ss_dssp CCCSS-------HHHHHHHHHHH
T ss_pred hcccc-------chHHHHHHHHH
Confidence 66565 55555555433
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0029 Score=59.39 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=89.7
Q ss_pred hhcCccEEEEccccccCchhH-HHHH---HHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHH
Q 018696 151 LIKQGSIFHYGSISLIAEPCR-STQL---AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEI 226 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~ 226 (351)
.....|.+.++|+..+.+... +.+. +.++..+..++++-+...+.. .+..+..+..+++++|-+-+|++|+
T Consensus 221 i~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~-----d~~~r~~i~~ilp~vDSlGmNE~EL 295 (453)
T PRK14038 221 IAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTP-----DETVREEILGLLGKFYSVGLNEVEL 295 (453)
T ss_pred hccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccc-----hHHHHHHHHhhCccccccccCHHHH
Confidence 346789999999987654322 2222 233333345788888876432 2345666667999999999999999
Q ss_pred hhhcCCC---------------CCChhHHHHHHHhc-CCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHH
Q 018696 227 TFLTGGD---------------DHNDDNVVLEKLFH-PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290 (351)
Q Consensus 227 ~~l~~~~---------------~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f 290 (351)
..+.... ..++..+.+.+|++ .|.+.+.|.. .+-+++.-+.
T Consensus 296 a~ll~~lg~~~l~~~i~~~~~~~~~~v~e~~~~L~~~~gleri~vHT--~~y~l~i~~~--------------------- 352 (453)
T PRK14038 296 ASIMEVMGEKTLAEKLLAKDPVDPIAVTEAMLKLAEKTGVKRIHFHT--YGYYLALTKY--------------------- 352 (453)
T ss_pred HHHHHHhccchhhhhhhhcCccCHHHHHHHHHHHHHHcCCCEEEEEe--cceeEEEecC---------------------
Confidence 9876411 11223334555554 6777655544 2322221110
Q ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 291 VSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 291 ~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
++.. +++|+.+|+.+||.... .| ...++++++.-+
T Consensus 353 ---------~~~~-------~~~aL~f~~~~AaarA~-~G---~i~~~~d~~~~l 387 (453)
T PRK14038 353 ---------RGEH-------VRDALLFAALAAAAKAM-LG---NIEKIDDVRKAL 387 (453)
T ss_pred ---------CHHH-------HHHHHHHHHHHHHHHHH-cC---CCCCHHHHHHHh
Confidence 3444 89999999999998775 34 334677776643
|
|
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0014 Score=63.60 Aligned_cols=146 Identities=13% Similarity=0.050 Sum_probs=87.5
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh--hhcCcEEEeCHHHHhhh
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI--WDQADIIKVSDDEITFL 229 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~--l~~~dvl~~N~~E~~~l 229 (351)
++.++.+.++.-....+ ....+++.+++.+.++++|+.- ...+... .....||.||..|+..|
T Consensus 318 ~~~~~a~viGpGlg~~~----~~~~~~~~~~~~~~P~VLDAda-----------L~ll~~~~~~~~~~VLTPh~gE~~rL 382 (508)
T PRK10565 318 LEWADVVVIGPGLGQQE----WGKKALQKVENFRKPMLWDADA-----------LNLLAINPDKRHNRVITPHPGEAARL 382 (508)
T ss_pred hhcCCEEEEeCCCCCCH----HHHHHHHHHHhcCCCEEEEchH-----------HHHHhhCccccCCeEECCCHHHHHHH
Confidence 45667777654332222 1234446667778999999842 1122110 11246999999999999
Q ss_pred cCCCCCC---hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCccc
Q 018696 230 TGGDDHN---DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK 306 (351)
Q Consensus 230 ~~~~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~ 306 (351)
++....+ +....++++.+.... +||-.|..-. +.+.++..++....-...-++|.||++++.+.+.+++|.+
T Consensus 383 ~~~~~~~v~~~~~~~a~~~a~~~~~-~vvlKG~~~i-I~~~~~~~~~~~~G~~~ma~~GsGDvLaGiIaalla~g~~--- 457 (508)
T PRK10565 383 LGCSVAEIESDRLLSARRLVKRYGG-VVVLKGAGTV-IAAEPDALAIIDVGNAGMASGGMGDVLSGIIGALLGQKLS--- 457 (508)
T ss_pred hCCChhhhhhhHHHHHHHHHHHhCC-EEEEeCCCcE-EEcCCceEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC---
Confidence 9844221 222345555544323 3444666443 4443333444443344556699999999988888888988
Q ss_pred chHHHHHHHHHHHHH
Q 018696 307 DENRLREALLFANAC 321 (351)
Q Consensus 307 ~~~~~~~a~~~a~~~ 321 (351)
+.+|+..|+..
T Consensus 458 ----~~~Aa~~a~~l 468 (508)
T PRK10565 458 ----PYDAACAGCVA 468 (508)
T ss_pred ----HHHHHHHHHHH
Confidence 88888877743
|
|
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00046 Score=65.55 Aligned_cols=163 Identities=13% Similarity=0.206 Sum_probs=80.3
Q ss_pred cCCChHHHHHHHHHHcCCCeE-EEeecCCChHHHHHHHHHHHCCCCCC--------Cee----ecCCCCCeEEEEEEecC
Q 018696 59 APGGAPANVAVGISRLGGSSA-FVGKLGDDEFGYMLANILKENNVDTS--------GVR----YDSTARTALAFVTLRAD 125 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~-~v~~vG~D~~g~~i~~~l~~~gid~~--------~v~----~~~~~~t~~~~~~~~~~ 125 (351)
..||.+.-+|..|+.++.... +.+.++.. .+.+.| ..+|-.- .+. ..++...-..+++....
T Consensus 93 r~GGnA~imAn~la~l~~~~Vil~~p~~sk----~~~~l~-~~~i~~P~v~~~~~~l~~~~~a~~~~~~~~iH~IlEy~~ 167 (444)
T PF04587_consen 93 RMGGNAGIMANRLANLEGCPVILYAPILSK----EQAELF-NDNIYVPVVENGELKLIHPREAFKEDDEDDIHLILEYKK 167 (444)
T ss_dssp EEESHHHHHHHHHCCTT-SEEEEE-SS--H----HHHTTS-SSSEEEEEEETTEEEEEEGGGS-STT----EEEEEEE-T
T ss_pred ccCchHHHHHHHHHhCCCCEEEEecCcCCH----HHHHhc-ccCcccccccCCcccccCchhccccCCccceEEEEEcCC
Confidence 599999999999997755544 44435543 233444 2222000 000 00112333444444444
Q ss_pred CC----------ceEEEecC-CcccccCCccccc---hhhhcCccEEEEccccccCc-----hhH----HHHHHHHHHHH
Q 018696 126 GE----------REFLFFRH-PSADMLLCESELD---KNLIKQGSIFHYGSISLIAE-----PCR----STQLAAMNLAK 182 (351)
Q Consensus 126 g~----------~~~~~~~~-~~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~a~ 182 (351)
|. ++++...+ .+..... .+.+. .+.....|.+.++|+.++.+ ... +.+.+.++..+
T Consensus 168 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~ 246 (444)
T PF04587_consen 168 GEKWGDITAPRANRFIVSSDPYNPRLSI-LEEFFEALEEIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLK 246 (444)
T ss_dssp TEEETTEE-SS-EEEEEEE-SSGGGTS---HHHHHSHHHHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH
T ss_pred CCeecceecCcCceEEEecCCCCccccc-hHHHHHHHHhhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhcc
Confidence 42 33333322 2222111 12221 12345699999999988663 112 22233333454
Q ss_pred -HcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 183 -ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 183 -~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
..++++-+...+. .+.+-.+..+..+++++|.+-+|++|+..+..
T Consensus 247 ~~~~~~iH~E~As~----~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~ 292 (444)
T PF04587_consen 247 SNPDIPIHLELASF----ADEELRKEILEKILPHVDSLGMNEQELANLLS 292 (444)
T ss_dssp -HTT-EEEEE--------SSHHHHHHHHHHHGGGSSEEEEEHHHHHHHHH
T ss_pred CCCCCceEEEeccc----cCHHHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 5789999998753 35556667777899999999999999998643
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0055 Score=53.51 Aligned_cols=168 Identities=17% Similarity=0.090 Sum_probs=99.4
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHH---hhhcCcEEEeCHHHH
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS---IWDQADIIKVSDDEI 226 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~---~l~~~dvl~~N~~E~ 226 (351)
+.++.+|.+.++.-.-..+.. .++++...+...++++|.. ....+.. .....-||.|+.-|+
T Consensus 63 ~~~~~~~av~iGPGlg~~~~~----~~~~~~~~~~~~p~VlDAD-----------aL~~l~~~~~~~~~~~IlTPH~gE~ 127 (242)
T PF01256_consen 63 ELLEKADAVVIGPGLGRDEET----EELLEELLESDKPLVLDAD-----------ALNLLAENPKKRNAPVILTPHPGEF 127 (242)
T ss_dssp HHHCH-SEEEE-TT-SSSHHH----HHHHHHHHHHCSTEEEECH-----------HHHCHHHCCCCSSSCEEEE-BHHHH
T ss_pred hhhccCCEEEeecCCCCchhh----HHHHHHHHhhcceEEEehH-----------HHHHHHhccccCCCCEEECCCHHHH
Confidence 456788988887543222222 2244445555778999962 1222222 234566899999999
Q ss_pred hhhcCCCC--CChhHHHHHHHhc-CCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCC
Q 018696 227 TFLTGGDD--HNDDNVVLEKLFH-PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQN 303 (351)
Q Consensus 227 ~~l~~~~~--~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~ 303 (351)
..|++... .++..+.++++.+ .++ +||-.|..-.++..+++.+. ....-...-+-|.||++++-+..-++++.+
T Consensus 128 ~rL~~~~~~~~~~~~~~a~~~a~~~~~--~vvLKG~~t~I~~p~~~~~~-n~~gn~~la~gGsGDvLaGii~~llaq~~~ 204 (242)
T PF01256_consen 128 ARLLGKSVEIQEDRIEAAREFAKEYGA--VVVLKGAVTIIASPGGRVYV-NPTGNPGLATGGSGDVLAGIIAGLLAQGYD 204 (242)
T ss_dssp HHHHTTTCHHCCSHHHHHHHHHHHHTS--EEEEESTSSEEEEETSEEEE-E----GGGSSTTHHHHHHHHHHHHHHHTSS
T ss_pred HHHhCCcccchhhHHHHHHHHHhhcCc--EEEEeCCCcEEEecCcceeE-eCCCCCCCCCCCcccHHHHHHHHHHHccCC
Confidence 99999776 3334445555554 343 56666776665544554444 333345667789999999988888899998
Q ss_pred cccchHHHHHHHHHHHHH----HhHHhcccCCCCCCCCHHHHHHHH
Q 018696 304 LIKDENRLREALLFANAC----GALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 304 ~~~~~~~~~~a~~~a~~~----Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
+.+++..|+.. +-...+..+. + ....+|.+.|
T Consensus 205 -------~~~Aa~~av~lHg~Ag~~~~~~~~~--~-~~a~dli~~i 240 (242)
T PF01256_consen 205 -------PFEAACLAVYLHGRAGDLAAEKYGR--G-MLASDLIDNI 240 (242)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHCTTCSS--C---HHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhCCC--c-CcHHHHHHhc
Confidence 88988888743 3333333443 2 3566665544
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0088 Score=51.56 Aligned_cols=143 Identities=17% Similarity=0.144 Sum_probs=88.6
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhh
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFL 229 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l 229 (351)
+.++=++-++.+ +....+.+....+.+++.+.|+++||..-.. ..-..+...+++. +.+++..|..|...|
T Consensus 55 ia~AL~INIGTL---~~~~~~~m~~A~~~An~~~~PvvLDPVgvgA----t~~R~~~~~~LL~~~~~~~IrGN~sEI~~L 127 (265)
T COG2145 55 IADALLINIGTL---SAERIQAMRAAIKAANESGKPVVLDPVGVGA----TKFRTKFALELLAEVKPAAIRGNASEIAAL 127 (265)
T ss_pred hccceEEeeccC---ChHHHHHHHHHHHHHHhcCCCEEecCccCCc----hHHHHHHHHHHHHhcCCcEEeccHHHHHHH
Confidence 444444444433 4455678888999999999999999953221 1122344555555 479999999999999
Q ss_pred cCCCC----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHH
Q 018696 230 TGGDD----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA 299 (351)
Q Consensus 230 ~~~~~----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~ 299 (351)
.+... .++..++++.+.+. .+.+++-.|+..+ +.++++.+.+.--..-.-.-||+|+...|...+.++
T Consensus 128 ag~~~~~kGVDa~~~~~~~~~~a~~~A~~-~~~vvvvTG~vD~-Isdg~~~~~i~nG~pll~~ItGtGCllgav~aaF~a 205 (265)
T COG2145 128 AGEAGGGKGVDAGDGAADAIEAAKKAAQK-YGTVVVVTGEVDY-ISDGTRVVVIHNGSPLLGKITGTGCLLGAVVAAFLA 205 (265)
T ss_pred hcccccccccccccchhhHHHHHHHHHHH-hCcEEEEECCeeE-EEcCCeEEEEECCCcHHhhhhccccHHHHHHHHHHh
Confidence 86432 11222334444332 2246666677665 334555555554444455669999888777766666
Q ss_pred hcCC
Q 018696 300 ADQN 303 (351)
Q Consensus 300 ~g~~ 303 (351)
...+
T Consensus 206 v~~d 209 (265)
T COG2145 206 VEKD 209 (265)
T ss_pred cCCC
Confidence 6665
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0035 Score=59.26 Aligned_cols=163 Identities=12% Similarity=0.139 Sum_probs=93.1
Q ss_pred ccccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecC--CCCCeEEEEEEecCCC-----
Q 018696 56 FKKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDS--TARTALAFVTLRADGE----- 127 (351)
Q Consensus 56 ~~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~--~~~t~~~~~~~~~~g~----- 127 (351)
...+.||.+..+|..++.+|. +|.+.+.+..... ...+.+.+|- +...+ ..+.-..+++..+.|.
T Consensus 101 ~~~~mGGnAgimAn~la~~g~~~Vil~~p~~~k~~----~~L~~d~~i~---~p~~e~~~~~d~IHlIlEy~~G~~~~~~ 173 (445)
T cd01938 101 DELRMGGNAGLMANRLAGEGDLKVLLGVPQSSKLQ----AELFLDGPIV---VPTFENLIEEDEIHLILEYPRGESWGDF 173 (445)
T ss_pred ceEEeCChHHHHHHHHHhcCCceEEEecCCCcHHH----HHhCCCCCee---ecccccCCCCCccEEEEEcCCCCEecce
Confidence 468999999999999999999 7777777555422 2222221111 11111 1123333333333333
Q ss_pred -----ceEEEecCCcccccCCccccchhhhcC-ccEEEEccccccCchh--HHHHHHHHHHHHH------cCCeEEEcCC
Q 018696 128 -----REFLFFRHPSADMLLCESELDKNLIKQ-GSIFHYGSISLIAEPC--RSTQLAAMNLAKE------SGSILSYDPN 193 (351)
Q Consensus 128 -----~~~~~~~~~~~~~~~~~~~i~~~~i~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~------~~~~v~~d~~ 193 (351)
++++...++ .+.....+.+..+..+. .|.+.++|+.++.+.. .....+.++.+++ ..+++-+...
T Consensus 174 ~aPraNRfI~~~d~-~n~l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~A 252 (445)
T cd01938 174 VAPRANRFIFHDDD-NNPMLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIHLELA 252 (445)
T ss_pred EcCCCCeEEEecCC-cchhhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEEEEec
Confidence 344433222 12122222222333444 8999999998876532 2333333333332 2367777776
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 194 LRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
+. .+.+-....+..+++++|-+=+|++|+..+.
T Consensus 253 s~----~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~ 285 (445)
T cd01938 253 ST----VDEELREEILHEVVPYVDSLGLNEQELANLL 285 (445)
T ss_pred cc----ccHHHHHHHHHHhcccccccccCHHHHHHHH
Confidence 43 3455666777789999999999999999875
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.015 Score=49.91 Aligned_cols=166 Identities=15% Similarity=0.135 Sum_probs=100.3
Q ss_pred hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHH-HHHHhhhcCcEEEeCHHHHh
Q 018696 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE-GIMSIWDQADIIKVSDDEIT 227 (351)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~~~~~l~~~dvl~~N~~E~~ 227 (351)
+..+...++++++.-.--++.....+..+++.++.+++|+++|... +|--. +..+ .+.. . ..-||.||..|+.
T Consensus 96 ~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDG---L~Lv~-q~~e~l~~~-~-~~viLTPNvvEFk 169 (306)
T KOG3974|consen 96 EKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADG---LWLVE-QLPERLIGG-Y-PKVILTPNVVEFK 169 (306)
T ss_pred HHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCc---eEehh-hchhhhhcc-C-ceeeeCCcHHHHH
Confidence 4467788888887655456666788889999999999999999742 12111 1111 1111 1 2357889999999
Q ss_pred hhcCCCC-CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH--Hh--cC
Q 018696 228 FLTGGDD-HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL--AA--DQ 302 (351)
Q Consensus 228 ~l~~~~~-~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l--~~--g~ 302 (351)
.|++... ..+....+..|...-....|+-.|+...++..+++....+. +-....--|=||..++.+...+ ++ ..
T Consensus 170 RLcd~~l~~~d~~~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~fl~w~k~~~~ 248 (306)
T KOG3974|consen 170 RLCDAELDKVDSHSQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLATFLSWAKLLSG 248 (306)
T ss_pred HHHHHhhccccchHHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHHHHHHHHhccC
Confidence 9998732 11222233444433345678888888876665555554443 3344555677999987665443 22 22
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 303 NLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+ ..+++..|..++++.+..
T Consensus 249 e-------~~~~~~~a~~a~s~~vr~ 267 (306)
T KOG3974|consen 249 E-------QDSAAFLAAVAGSIMVRR 267 (306)
T ss_pred C-------ccchhhhhhhhhHHHHHH
Confidence 2 335556666555555444
|
|
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.1 Score=46.49 Aligned_cols=172 Identities=15% Similarity=0.059 Sum_probs=90.4
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcC-CeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~ 228 (351)
..+.+|.+.++.-.-..+...+...++ -+.. .++++|...-. .......+. ..--||.|+.-|++.
T Consensus 98 ~~~~~~avviGpGlG~~~~~~~~~~~~----l~~~~~p~ViDADaL~--------~la~~~~~~~~~~~VlTPH~gEf~r 165 (284)
T COG0063 98 LVERADAVVIGPGLGRDAEGQEALKEL----LSSDLKPLVLDADALN--------LLAELPDLLDERKVVLTPHPGEFAR 165 (284)
T ss_pred hhccCCEEEECCCCCCCHHHHHHHHHH----HhccCCCEEEeCcHHH--------HHHhCcccccCCcEEECCCHHHHHH
Confidence 356788888774333333333333333 3333 79999974210 000111111 122688899999999
Q ss_pred hcCCCCCC---hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcc
Q 018696 229 LTGGDDHN---DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLI 305 (351)
Q Consensus 229 l~~~~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~ 305 (351)
|++....+ +..+.++.+.+.. ..+||-.|..-++.. .+...++...--.-.-+=|.||++++-+.+-|+++ +
T Consensus 166 L~g~~~~~~~~~r~~~a~~~a~~~-~~vvVLKG~~tvI~~-~~g~~~~n~~G~~~ma~GGtGDvLaGii~alLAq~-~-- 240 (284)
T COG0063 166 LLGTEVDEIEVDRLEAARELAAKY-GAVVVLKGAVTVIAD-PDGEVFVNPTGNPGMATGGTGDVLAGIIGALLAQG-P-- 240 (284)
T ss_pred hcCCcccccccchHHHHHHHHHHc-CCEEEEeCCCCEEEc-CCCcEEEcCCCCHHhccCcchHHHHHHHHHHHhCC-C--
Confidence 99843222 1223444544432 336677777666554 33233333332234445688999887666666777 4
Q ss_pred cchHHHHHHHHHHHHHHh----HHhcccCCCCCCCCHHHHHHHHh
Q 018696 306 KDENRLREALLFANACGA----LTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 306 ~~~~~~~~a~~~a~~~Aa----~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
.++.+|+..|+..=+ ..-...+ -....|+-+.+.
T Consensus 241 ---~~~~~Aa~~g~~~h~~ag~la~~~~g----~~~a~Dl~~~ip 278 (284)
T COG0063 241 ---ADPLEAAAAGAWLHGRAGELAAKKHG----GLTATDLIEAIP 278 (284)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhhccC----CCCHHHHHHHHH
Confidence 136666666653322 3333333 235666655554
|
|
| >KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.24 Score=44.65 Aligned_cols=161 Identities=12% Similarity=0.182 Sum_probs=87.9
Q ss_pred CccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCC--CCCCCeeecCCCCCeEEEEEEecCCCceEEE
Q 018696 55 AFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN--VDTSGVRYDSTARTALAFVTLRADGEREFLF 132 (351)
Q Consensus 55 ~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~g--id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~ 132 (351)
+...+.||.+.-+|.-...-| .++++|..|.-.....+-...+-.| |--+.+ .+++....|+.- .-
T Consensus 137 R~~~~mGGNA~LMA~R~~~~~-~~~LlG~~~~R~~~~L~P~~~R~~~~~I~~Ddi----------HlILEYK~Gd~~-G~ 204 (478)
T KOG4184|consen 137 RINWYMGGNAPLMAVRFFMEG-AQVLLGAHMSRKLRPLLPKEIRLAGDEIPNDDI----------HLILEYKAGDKW-GP 204 (478)
T ss_pred hhhhhccCCchHHHHHHHhcc-ceeeecccccchhccccchhhhcccCcCcCCce----------EEEEEeccCCcc-cc
Confidence 567899999888888888777 8889999997644433333333332 111111 222222223210 00
Q ss_pred ecCCcccccCCc-----------ccc-chhhhcCccEEEEccccccCchhHHHHHHHHHHHHH------cCCeEEEcCCC
Q 018696 133 FRHPSADMLLCE-----------SEL-DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE------SGSILSYDPNL 194 (351)
Q Consensus 133 ~~~~~~~~~~~~-----------~~i-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~------~~~~v~~d~~~ 194 (351)
|-.|.+++.+.. +++ +.-..-+.|.++++|+.+++-...+...+-+...+. .|+++-+...+
T Consensus 205 ~VAP~anR~I~~~D~~n~~m~~~E~f~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~HlElaS 284 (478)
T KOG4184|consen 205 YVAPRANRYILHNDRNNPHMRAVEQFTDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVHLELAS 284 (478)
T ss_pred cccccccceeeecCCCChHHHHHHHHHHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchhhhHhH
Confidence 111222222211 111 111223568899999877665555443333333332 35566555543
Q ss_pred CCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 195 RLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
. .+.+-..+.+-.+++++|-|=+|++|+..|..
T Consensus 285 ~----~~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q 317 (478)
T KOG4184|consen 285 M----TNRELMSSIVHQVLPYVDSLGLNEQELLFLTQ 317 (478)
T ss_pred H----HHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence 2 22333445566789999999999999988753
|
|
| >COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.29 E-value=15 Score=34.03 Aligned_cols=77 Identities=8% Similarity=0.005 Sum_probs=51.0
Q ss_pred hhcCccEEEEccccccCch----h-----HHHHHHHHHHHHH-cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEE
Q 018696 151 LIKQGSIFHYGSISLIAEP----C-----RSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~ 220 (351)
.....|...++|+..+.+. + .+...+-++..+. .++++=+...+.. +..-.+..+..++++++-+=
T Consensus 222 i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~~----d~~irk~i~~~il~~v~SvG 297 (466)
T COG4809 222 IAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASIQ----DRKIRKEILTNILSIVYSVG 297 (466)
T ss_pred HhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEecccc----cHHHHHHHHHHHHhhhhhcC
Confidence 4456788888888753321 1 2233344455555 6778888776532 44455666777999999999
Q ss_pred eCHHHHhhhcC
Q 018696 221 VSDDEITFLTG 231 (351)
Q Consensus 221 ~N~~E~~~l~~ 231 (351)
+|+.|...+..
T Consensus 298 ldE~ElA~vl~ 308 (466)
T COG4809 298 LDEVELANVLN 308 (466)
T ss_pred CCHHHHHHHHH
Confidence 99999887654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 351 | ||||
| 3ljs_A | 338 | Crystal Structure Of Fructokinase From Xylella Fast | 2e-39 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 5e-38 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 5e-37 | ||
| 3hj6_A | 327 | Structure Of Halothermothrix Orenii Fructokinase (F | 6e-32 | ||
| 3iq0_A | 330 | Crystal Structure Of A Putative Ribokinase Ii In Co | 9e-25 | ||
| 3ewm_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 2e-24 | ||
| 3gbu_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 4e-23 | ||
| 2qcv_A | 332 | Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl | 1e-22 | ||
| 2v78_A | 313 | Crystal Structure Of Sulfolobus Solfataricus 2-Keto | 5e-18 | ||
| 2dcn_A | 311 | Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase | 6e-18 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 9e-17 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 1e-15 | ||
| 3pl2_A | 319 | Crystal Structure Of A 5-Keto-2-Deoxygluconokinase | 4e-15 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 7e-14 | ||
| 3ry7_A | 304 | Crystal Sructure Of Sa239 Length = 304 | 7e-13 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 7e-13 | ||
| 4e69_A | 328 | Crystal Structure Of A Sugar Kinase (Target Efi-502 | 1e-12 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 2e-12 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 7e-12 | ||
| 2qhp_A | 296 | Crystal Structure Of Fructokinase (Np_810670.1) Fro | 8e-10 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 3e-09 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 3e-07 | ||
| 2rbc_A | 343 | Crystal Structure Of A Putative Ribokinase From Agr | 5e-06 | ||
| 4gm6_A | 351 | Crystal Structure Of Pfkb Family Carbohydrate Kinas | 7e-04 |
| >pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 | Back alignment and structure |
|
| >pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex With Atp And Mg+2 From E.Coli Length = 330 | Back alignment and structure |
|
| >pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii Length = 313 | Back alignment and structure |
|
| >pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii In Complex With Atp Length = 313 | Back alignment and structure |
|
| >pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 | Back alignment and structure |
|
| >pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3- Deoxygluconate Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From Sulfolobus Tokodaii Complexed With 2-Keto-6-Phosphogluconate (Alpha-Furanose Form) Length = 311 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
| >pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase (Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.89 A Resolution Length = 319 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|4E69|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132) From Oceanicola Granulosus, Unliganded Structure Length = 328 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution Length = 296 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|2RBC|A Chain A, Crystal Structure Of A Putative Ribokinase From Agrobacterium Tumefaciens Length = 343 | Back alignment and structure |
|
| >pdb|4GM6|A Chain A, Crystal Structure Of Pfkb Family Carbohydrate Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601 Length = 351 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 1e-155 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 1e-151 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 1e-150 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 1e-149 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 1e-148 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 1e-147 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 1e-143 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 1e-139 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 1e-134 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 1e-130 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-130 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 1e-130 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 1e-129 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-123 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 1e-118 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 7e-98 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 3e-94 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 7e-68 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 3e-61 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 3e-58 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 2e-57 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 2e-55 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 3e-54 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 5e-54 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 3e-52 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 4e-52 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 5e-52 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 1e-50 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 5e-49 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 4e-48 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 4e-46 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 1e-45 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 6e-44 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 5e-33 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 7e-27 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 8e-27 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 3e-26 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 3e-26 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 1e-13 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 1e-13 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 2e-13 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 3e-13 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 6e-13 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 7e-13 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 4e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-07 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 438 bits (1130), Expect = e-155
Identities = 118/322 (36%), Positives = 165/322 (51%), Gaps = 9/322 (2%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
++CFGE LID + V AF + GGAPANVAV ++RLGG+ FVG LG D FG
Sbjct: 7 ILCFGEALIDMLAQ-PLVKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFG 65
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
L + E V T G+ STA+TALAFV L A GER F F+R P+AD+L
Sbjct: 66 DFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDA 125
Query: 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIM 210
IFH S S+ M A+ +G+I+S+D N R LWP+ E +
Sbjct: 126 SFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLW 185
Query: 211 SIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFK 270
AD++K+S +E+ +L D N V+++L+ +LL+VT+ + +YT+
Sbjct: 186 KGLSLADVVKLSSEELDYLANTLA-ADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAG 244
Query: 271 GRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-------QNLIKDENRLREALLFANACGA 323
G VP + + D+ AGD+FV G+L A + D + L FA A GA
Sbjct: 245 GEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGA 304
Query: 324 LTVTERGAIPALPTKEAALKLL 345
L VT +GA A+P L L+
Sbjct: 305 LAVTRQGAFTAMPMLSEVLSLI 326
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 426 bits (1099), Expect = e-151
Identities = 81/327 (24%), Positives = 139/327 (42%), Gaps = 14/327 (4%)
Query: 20 MDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSA 79
M + ++ V+ G + +D P GV LA+ +F K GG+ ANV+V +R G +SA
Sbjct: 2 MTNLTSTHE--VLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSA 59
Query: 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA- 138
+ ++G+D FG L L+ VD V D T +T + F + + F+R P A
Sbjct: 60 LLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAP 119
Query: 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPL 198
D+ + +++ + +++ I + EP R T + + + +D + R
Sbjct: 120 DLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREIL-TTRANRRHTIFDLDYRPMF 178
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEG 258
W S E A + + + + +E G + L ++L IV +G
Sbjct: 179 WESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEPER---AGRALLERGVELAIVKQG 235
Query: 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFA 318
KG TK+ VP ++ GAGD+F + + L ++ L + L FA
Sbjct: 236 PKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFA 288
Query: 319 NACGALTVTERGAIPALPTKEAALKLL 345
N GAL + A+PT + L
Sbjct: 289 NTAGALVASRLECSTAMPTTDEVEASL 315
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 425 bits (1096), Expect = e-150
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 9/317 (2%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
++ G ID + E F K GG+PAN+ +G S+LG + F+GK+ DD+ G
Sbjct: 14 LIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHG 73
Query: 91 YMLANILKENNVDTSGVRYDSTA-RTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
+ + ++ VDTS + D +T LAF +++ E L +R AD+ L E+++
Sbjct: 74 RFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE 133
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
I++ + +L P R L A+ LAK + + ++ + R W + E
Sbjct: 134 AYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYY 193
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ +Q+DI+ + +E L + D++ + LF + +L+++ G +G YTK
Sbjct: 194 SLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAG 253
Query: 270 KG-RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328
+ R KTK + T GAGDS+ S L L + + + AL + +A ++ V++
Sbjct: 254 EAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSK 306
Query: 329 RGAIPALPTKEAALKLL 345
+ A+P+ E L+
Sbjct: 307 HSSSDAMPSVEEIEALI 323
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 422 bits (1088), Expect = e-149
Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 12/316 (3%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAF-KKAPGGAPANVAVGISRLGGSSAFVGKLGDDEF 89
V GE+L++ + + G + + P GAPA ++RLG + +G+D F
Sbjct: 6 VFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGF 65
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G + + L + VD G+ T AFVT G+R+F+F +A L +D+
Sbjct: 66 GDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE 125
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
N++K + FH SL + A+ + K +G ++S+DPN+R + E R+ +
Sbjct: 126 NILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPE-MRDAL 184
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ + DI S+ E+ L+ + +K +IV G++G YY+
Sbjct: 185 HFVLELTDIYMPSEGEVLLLSPHSTPER---AIAGFLEEGVKEVIVKRGNQGASYYSANE 241
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+ V + VD TGAGD F + C + AL +ANACGAL VT R
Sbjct: 242 QFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRR 294
Query: 330 GAIPALPTKEAALKLL 345
G + +
Sbjct: 295 GPMEGTSRLMEIETFI 310
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 421 bits (1085), Expect = e-148
Identities = 113/344 (32%), Positives = 163/344 (47%), Gaps = 19/344 (5%)
Query: 2 ADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPG 61
+ +H+ +G + M V G+ +D VP + ++ K PG
Sbjct: 3 SSHHHHHHSSGLVPRGSHM---KAMNK--VWVIGDASVDLVPE-------KQNSYLKCPG 50
Query: 62 GAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVT 121
GA ANV V ++RLGG F+G LGDD+ G L + ++N VD + +R D+ +A+ V
Sbjct: 51 GASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVN 110
Query: 122 LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181
L ADGER F + HP AD + +L +Q F++ SI L P R L
Sbjct: 111 LTADGERSFTYLVHPGADTYVSPQDLP--PFRQYEWFYFSSIGLTDRPAREACLEGARRM 168
Query: 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV 241
+E+G + +D NLR +W + + E I A I KVS DE+ L+G D
Sbjct: 169 REAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQD---A 225
Query: 242 LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301
L I++ G+ G T E + P + VDTTGAGD+FV G+L L+
Sbjct: 226 RYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRA 285
Query: 302 QNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
D L EA+ ANACGA+ VT +GA+ ALP + L
Sbjct: 286 NCW--DHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFL 327
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-147
Identities = 103/337 (30%), Positives = 163/337 (48%), Gaps = 15/337 (4%)
Query: 9 SGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVA 68
G L+ + G D VV GE+L+D + T SL+++ + + GG+PAN+A
Sbjct: 4 EGVIVGILNKNFSLSKGDLD--VVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIA 61
Query: 69 VGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGER 128
V +SRLG A + +LG D FG L ++LK + T G++ D RT + +V+ R
Sbjct: 62 VNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSK---STR 118
Query: 129 EFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188
+ + ADM L E ++ LIK+ +FH + L +P R T + A N A+E G I+
Sbjct: 119 TPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIV 178
Query: 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHP 248
+DP R LWP + + I +AD +K S D+ L G D + +++
Sbjct: 179 CFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPEN---YVKRYLEL 235
Query: 249 NLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308
+K +I+T G +G E R+P AVD TGAGD+F SG + L
Sbjct: 236 GVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT----- 290
Query: 309 NRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
++ ++ N A + GA+ +P+KE +K
Sbjct: 291 --VKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEY 325
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 406 bits (1047), Expect = e-143
Identities = 100/349 (28%), Positives = 150/349 (42%), Gaps = 18/349 (5%)
Query: 1 MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAP 60
M +H+ +SG + + A D V+ FGE ++ V G L A AF K
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMTSALD--VITFGEAMMLLVADRPG-PLEHAEAFHKRT 57
Query: 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFV 120
GA NVA+G++RLG + +LG D G L + +D S V D+T +T F
Sbjct: 58 AGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFK 117
Query: 121 TLRADG-EREFLFFRHPSADMLLCESELDKNLIKQGSIFH-YGSISLIAEPCRSTQLAAM 178
DG + + R SA + +++D+ + H G I+ M
Sbjct: 118 GKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTM 177
Query: 179 NLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD 238
+L + +G +S+DPNLR LW + E R+ I + +AD + +E FLTG
Sbjct: 178 DLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEG- 236
Query: 239 NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNC 297
V KL++V G++G + + GRV G + VDT GAGD F G+++
Sbjct: 237 --VARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISA 294
Query: 298 LAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA--ALKL 344
L + EA+ GA V G LPT+ A KL
Sbjct: 295 LLDGLG-------VPEAVKRGAWIGARAVQVLGDSEGLPTRAELNAAKL 336
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-139
Identities = 103/316 (32%), Positives = 154/316 (48%), Gaps = 22/316 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+ GE+LID + G L + F+K PGGAPANVAVG+SRLG S+ + K+G+D FG
Sbjct: 4 IASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFG 62
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
L L + NVDT G+ D T + FV L+ F A + ++++ +
Sbjct: 63 EYLIEELSKENVDTRGIVKDEKKHTGIVFVQLK-GASPSF-LLYDDVAYFNMTLNDINWD 120
Query: 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPS-EEAAREGI 209
++++ I ++GS+ L P R T + + K S I ++D NLRL LW EE + +
Sbjct: 121 IVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLI-AFDVNLRLDLWRGQEEEMIKVL 179
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
ADI+K S++E+ +L L +T G KGCR E
Sbjct: 180 EESIKLADIVKASEEEVLYLENQGVEVK-----------GSMLTAITLGPKGCRLIKNET 228
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
VP +DTTGAGD+F++ +L + + L L + FAN AL+ +R
Sbjct: 229 VVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGL-----DLLKLGKFANLVAALSTQKR 283
Query: 330 GAIPALPTKEAALKLL 345
GA + P K+ LK
Sbjct: 284 GAW-STPRKDELLKYK 298
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 384 bits (989), Expect = e-134
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 20/320 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
V+ GE LI F G L F+K G+ N + + R S + + ++G+DEFG
Sbjct: 4 VIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFG 62
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELD 148
+ + +DTS ++ D+ + T + F+ + E +++R SA L +++
Sbjct: 63 KNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDIN 122
Query: 149 KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
+N ++ + H I+L I++ + + A LAK S D N+R LW S E A+E
Sbjct: 123 ENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKS----RSLDTNIRPKLWSSLEKAKE 178
Query: 208 GIMSIWDQADI--IKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265
I+SI + DI + D+ L D ++ K +K+L+ GSKG Y
Sbjct: 179 TILSILKKYDIEVLITDPDDTKILLDVTDPDE---AYRKYKELGVKVLLYKLGSKGAIAY 235
Query: 266 TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALT 325
K K D TGAGD+ ++ ++ + +L A L
Sbjct: 236 KDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLV 288
Query: 326 VTERGAIPALPTKEAALKLL 345
+T RG PT E A + L
Sbjct: 289 ITVRGDNELTPTLEDAERFL 308
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 373 bits (961), Expect = e-130
Identities = 91/316 (28%), Positives = 129/316 (40%), Gaps = 19/316 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
VV GE L+ VP G L + GGA NVAV ++RLG FVG++G+DE G
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELG 62
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
M+ L+ VD + R T L G+ ++R SA L D +
Sbjct: 63 AMVEERLRAEGVDLTHFRRAP-GFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPD 121
Query: 151 LIKQGSIFHYGSISLIAEP-CRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
++ H I+ P R+ L AM AK G +S D N R LW EE AR +
Sbjct: 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEE-ARGFL 180
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
D++ +S++E L G + E L + +++ G+KG +
Sbjct: 181 ERALPGVDLLFLSEEEAELLFGRVE--------EALRALSAPEVVLKRGAKGAWAFVDGR 232
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+ +AVD GAGD+F +G L + E L AN GA R
Sbjct: 233 RVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASR 285
Query: 330 GAIPALPTKEAALKLL 345
G P +E LL
Sbjct: 286 GDHEGAPYREDLEVLL 301
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 374 bits (963), Expect = e-130
Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 28/348 (8%)
Query: 1 MADNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAP 60
M +H+ +SG + ++ GE + + P ++
Sbjct: 1 MHHHHHHSSGVDLGTENLYF---QSMMH--ILSIGECMAELAPA------DLPGTYRLGF 49
Query: 61 GGAPANVAVGISRLGGSS--AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALA 118
G N A ++RL S ++ +GDD + + +D G+R L
Sbjct: 50 AGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLY 109
Query: 119 FVTLRADGEREFLFFRHPSAD-MLLCESELDKNLIKQGSIFHYGSISL--IAEPCRSTQL 175
+TL GER F ++R SA L +++ + + + ++ I+L + + R+T L
Sbjct: 110 LITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQCGRATLL 168
Query: 176 AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH 235
A+ A+ +G +++DPNLR LW E IM +DI S ++ G
Sbjct: 169 RALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAGP 228
Query: 236 NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGI 294
+ ++ ++ ++V G + +GRVP + VDTT AGDSF +G+
Sbjct: 229 DA---TADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGL 285
Query: 295 LNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342
L+ + A Q L A+ A A V +GA+ +P+
Sbjct: 286 LDSVLAGQP-------LETAIAAAAALAGQVVQGKGALVEVPSLRPHA 326
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-130
Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 31/315 (9%)
Query: 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDE 88
++V GE L D +P K GGAPAN A +S+ G S V +G+DE
Sbjct: 4 NIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDE 51
Query: 89 FGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD 148
G + + KE + R D T VTL +G + + D + EL
Sbjct: 52 LGDEIMEVFKEKQLKNQIERVD--YPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELK 109
Query: 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAARE 207
L +GS++ E R+T ++ + G + +D NLR + +E
Sbjct: 110 -RLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT-----KE 163
Query: 208 GIMSIWDQADIIKVSDDEITFLTGG---DDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264
+ + + +I+K++D+E+ ++ + + L NLK+LI+T G G
Sbjct: 164 VLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYV 223
Query: 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGAL 324
+T K DT GAGDSF + + + + EA A A
Sbjct: 224 FTPGVVSFQETPKVPVADTVGAGDSFTAAFCASIL-------NGKSVPEAHKLAVEVSAY 276
Query: 325 TVTERGAIPALPTKE 339
T+ GA+P LP
Sbjct: 277 VCTQSGAMPELPVIL 291
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 370 bits (953), Expect = e-129
Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 20/319 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
++ GE+LI+F G L F+K G+ AN V + G + K+GDDEFG
Sbjct: 4 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFG 62
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTL--RADGEREFLFFRHPSADMLLCESELD 148
Y L+ VD S ++ D +A T + F+ + E +++R SA L ++D
Sbjct: 63 YNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD 122
Query: 149 KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
+ +K + H I+L I+ + A +A S+D N+RL LW +EEA RE
Sbjct: 123 EEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASN----RSFDTNIRLKLWSAEEAKRE 178
Query: 208 GIMSIWD-QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266
+ + + D+ + G D + K F +++++ G KG Y
Sbjct: 179 ILKLLSKFHLKFLITDTDDSKIILGESDPDK----AAKAFSDYAEIIVMKLGPKGAIVYY 234
Query: 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTV 326
K G + D TGAGD+ L+ + +AL +A L V
Sbjct: 235 DGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNV 287
Query: 327 TERGAIPALPTKEAALKLL 345
RG LPT + L
Sbjct: 288 MIRGDQENLPTTKDIETFL 306
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 356 bits (917), Expect = e-123
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 34/325 (10%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSA----FVGKLGD 86
+ GE +I+ + K+ GG N +V I+R +A +V LG
Sbjct: 7 IAVIGECMIELSE--------KGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGT 58
Query: 87 DEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESE 146
D F + + NVDTS + L ++ + GER F ++R+ +A SE
Sbjct: 59 DSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASE 118
Query: 147 LDKNLIKQGSIFHYG-----SISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPS 201
+ ++ + F Y S+++++ R L+ + + G + +D N R LW S
Sbjct: 119 QSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWAS 178
Query: 202 EEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261
+E ++ + + DI ++ D+ L G D V+ + + +K ++V G+
Sbjct: 179 KEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVED---VIARTHNAGVKEVVVKRGADS 235
Query: 262 CRYYTK-EFKGRVPGVK---TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317
C E VP VK K +DTT AGDSF +G L + A
Sbjct: 236 CLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKR 288
Query: 318 ANACGALTVTERGAI---PALPTKE 339
+ + + RGAI A+P +
Sbjct: 289 GHLTASTVIQYRGAIIPREAMPAEG 313
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-118
Identities = 75/321 (23%), Positives = 128/321 (39%), Gaps = 22/321 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPA-----FKKAPGGAPANVAVGISRLGGSSAFVGKLG 85
V+C G ++D ++ + + GG N A ISRLG +A + ++G
Sbjct: 8 VICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIG 67
Query: 86 DDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES 145
D G + + ++ N+D ++ D + T++ + DGER F+ R + L
Sbjct: 68 KDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNR-NGSLWKLNID 126
Query: 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAA 205
++D Q + SI AK I+ D + P
Sbjct: 127 DVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICAD-----MIKPRLNET 181
Query: 206 REGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265
+ I D + + E LTG + ++ + + +K +++ G GC
Sbjct: 182 LDDICEALSYVDYLFPNFAEAKLLTGKETLDE---IADCFLACGVKTVVIKTGKDGCFIK 238
Query: 266 TKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGAL 324
+ +VP V A+DT GAGD+F SG + L +N LRE FANA A+
Sbjct: 239 RGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAI 291
Query: 325 TVTERGAIPALPTKEAALKLL 345
+V GA + ++ +LL
Sbjct: 292 SVLSVGATTGVKNRKLVEQLL 312
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 293 bits (751), Expect = 7e-98
Identities = 71/332 (21%), Positives = 127/332 (38%), Gaps = 33/332 (9%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
VV FGE+++ P + + +F GGA ANVA ++++G + FV KL ++ G
Sbjct: 15 VVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLG 73
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGER-EFLFFRHPSADMLLCESELD- 148
A L++ V T + R + F+ + A + ++ R SA + D
Sbjct: 74 DAAAGHLRKFGVKTDYIARGG-NRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW 132
Query: 149 KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
+ ++ FH+ I+ + + A+ +A E G +S D N R LW EE A++
Sbjct: 133 EKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEE-AQK 191
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDD------------NVVLEKLFHPNLKLLIV 255
++ + D++ ++++I + G D + E N K + +
Sbjct: 192 VMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGI 251
Query: 256 T--------EGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKD 307
T + + VD GAGDSF ++ +
Sbjct: 252 TLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD---- 307
Query: 308 ENRLREALLFANACGALTVTERGAIPALPTKE 339
++ FA A L T G L +E
Sbjct: 308 ---SQKKAEFAAAASCLKHTIPGDFVVLSIEE 336
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 3e-94
Identities = 68/335 (20%), Positives = 118/335 (35%), Gaps = 30/335 (8%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+ FGE+++ F P + L + + G N+ ++ +A + KL + G
Sbjct: 5 IAAFGEVMLRFTP-PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLG 63
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELD 148
L++ + V F + + RH SA + + D
Sbjct: 64 EAGKAALRKLGISDQWVGEKG-DHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD 122
Query: 149 -KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEA-- 204
+ + + + H ISL + E R L A + +D N R L + A
Sbjct: 123 FEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALF 182
Query: 205 AREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDN-------VVLEKLFHPNLKLLIVTE 257
R+ I DI+ S ++ L G D ++ + NL+ T
Sbjct: 183 MRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTT 242
Query: 258 GSK-------GCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENR 310
S YT+ + +D GAGD++ +GIL + + +
Sbjct: 243 RSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS------- 295
Query: 311 LREALLFANACGALTVTERGAIPALPTKEAALKLL 345
L +A+ FA G L T +G IP L T + +L
Sbjct: 296 LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVL 329
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 7e-68
Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 37/321 (11%)
Query: 31 VVCFGEMLIDFVPTV-----GGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLG 85
+ C G +D++ V S+ + P+ +K GGA AN AVGI +LG +S + +G
Sbjct: 8 ITCVGHTALDYIFNVEKFPEPNTSI-QIPSARKYYGGAAANTAVGIKKLGVNSELLSCVG 66
Query: 86 DDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES 145
D LK +++ S + Y T A++ D + F A E
Sbjct: 67 YDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFF--LWGAAKHYKEL 124
Query: 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAA 205
I H IA L A + ++S+DP LP + E
Sbjct: 125 NPP---NFNTEIVH------IATGDPEFNLKCAKKAYGNN-LVSFDPGQDLPQYSKEM-- 172
Query: 206 REGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265
++ I + + + ++ E + + D+ + + LIVT+GSKG Y
Sbjct: 173 ---LLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLE------RVDALIVTKGSKGSVIY 223
Query: 266 TKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGAL 324
TK+ K +P +K K +D TGAGDS+ +G L+ + L + L A +
Sbjct: 224 TKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASF 276
Query: 325 TVTERGAIPALPTKEAALKLL 345
V +G LPT + ++ L
Sbjct: 277 VVEAKGCQTNLPTWDKVVERL 297
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 3e-61
Identities = 57/303 (18%), Positives = 102/303 (33%), Gaps = 29/303 (9%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS-AFVGKLGDDEF 89
++ G + D + T G GG+ +A+ S VG +G D F
Sbjct: 5 LLVIGSLAFDDIETPFG-------RSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-F 56
Query: 90 GYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK 149
G ++L N+DT G++ +T D +
Sbjct: 57 GKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHVPQY 116
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+ + QL ++ + ++ N + P E +
Sbjct: 117 --------YRDSKFVCLGNIDPELQLKVLDQIDDPKLVVCDTMNFWIEGKPEE------L 162
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
+ + D+ V+D E L+G + + K LI+ +G G +T
Sbjct: 163 KKVLARVDVFIVNDSEARLLSGDPNLVKT---ARIIREMGPKTLIIKKGEHGALLFTDNG 219
Query: 270 KGRVPGVKTKA-VDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328
P ++ D TGAGD+F G + LA N E +R+A+L+ +A + V +
Sbjct: 220 IFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASFCVEQ 277
Query: 329 RGA 331
G
Sbjct: 278 FGP 280
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 3e-58
Identities = 54/310 (17%), Positives = 112/310 (36%), Gaps = 30/310 (9%)
Query: 31 VVCFGEMLIDFV------PTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84
++C G +++D + P + + GG +N +S LG AF+G +
Sbjct: 20 ILCVGLVVLDVISLVDKYPKEDSEIRCLS--QRWQRGGNASNSCTILSLLGAPCAFMGSM 77
Query: 85 GDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTL-RADGEREFLFFRHPSADMLLC 143
+ + L+ +VD + +T +A V + A G R L++ D +
Sbjct: 78 APGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPD--VS 135
Query: 144 ESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEE 203
++ +K + Q H + S Q+ + + + +R+ + E
Sbjct: 136 ATDFEKVDLTQFKWIHIEGRNA------SEQVKMLQRIDAHNTRQPPEQKIRVSVEV--E 187
Query: 204 AAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263
RE + ++ D++ VS D L + ++ +L+ +G
Sbjct: 188 KPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRV--RKGAVLVCAWAEEGAD 245
Query: 264 YYTK--EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANAC 321
+ + VDT GAGD+F + ++ L+ ++ ++EAL F
Sbjct: 246 ALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQV 298
Query: 322 GALTVTERGA 331
+G
Sbjct: 299 AGKKCGLQGF 308
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 2e-57
Identities = 70/330 (21%), Positives = 123/330 (37%), Gaps = 36/330 (10%)
Query: 23 GSGAYDRLVVCFG----EMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 78
GS AYD ++ G +L D V + +S P ++ GG N+A ++ LGG +
Sbjct: 7 GSIAYDNIMTFEGRFREHILPDQVHLIN-LSFL-VPTMRREFGGCAGNIAYALNLLGGDA 64
Query: 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA 138
+G LG + L + + VR +A A +T D + F HP A
Sbjct: 65 RMMGTLGAVDAQPYLDR-MDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAF--HPGA 121
Query: 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPL 198
M + + ++++ + ++G +DP LPL
Sbjct: 122 MMQSHVNHAGE--------AKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGLPL 173
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEG 258
+ R + A I V+D E + ++D + ++ LI+T G
Sbjct: 174 FDGATLRR-----SIELATYIAVNDYEAKLVCDKTGWSEDEIAS------RVQALIITRG 222
Query: 259 SKGCRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317
G ++ ++P V+ + +D TG GD+F G+L + + A
Sbjct: 223 EHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRL 275
Query: 318 ANACGALTVTERGAIPALPTKEAALKLLHT 347
A+ GAL + +G PT+ T
Sbjct: 276 ASLMGALKIAHQGPQTYAPTRAEIDARFET 305
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 2e-55
Identities = 75/329 (22%), Positives = 112/329 (34%), Gaps = 34/329 (10%)
Query: 23 GSGAYDRLVVCFG----EMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS 78
GS A D L+ G ++L + + V +S GG N+A I LGG
Sbjct: 17 GSIATDHLMRFPGRFSEQLLPEHLHKVS-LSFL-VDDLVMHRGGVAGNMAFAIGVLGGEV 74
Query: 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA 138
A VG G D Y LK V+ V TA TA T D + F +P A
Sbjct: 75 ALVGAAGADFADYRDW--LKARGVNCDHVLISETAHTARFTCTTDVDMAQIASF--YPGA 130
Query: 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPL 198
+L + S + +I ++ G + DP+ +L
Sbjct: 131 MSEARNIKLADVV----SAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLAR 186
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEG 258
EE I + + A + +D E L ++ +V+ + + L + T G
Sbjct: 187 LSGEE-----IRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQ------IDLRVTTLG 235
Query: 259 SKGCRYYTKEFKG-RVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALL 316
KG + V V T D TG GD+F +G L +A L +
Sbjct: 236 PKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQ 288
Query: 317 FANACGALTVTERGAIPALPTKEAALKLL 345
+ L + G EAA L
Sbjct: 289 LGSLVAVLVLESTGTQEWQWDYEAAASRL 317
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 3e-54
Identities = 52/304 (17%), Positives = 94/304 (30%), Gaps = 37/304 (12%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+ G + D G + A GG A+ S LG + + K ++
Sbjct: 14 ITFIGHVSKDVNVVDGKR--------EIAYGGGVVMGAITSSLLGVKTKVITKCTREDVS 65
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
+ L++N V+ ++ T + +D + F SA ES+L
Sbjct: 66 KF--SFLRDNGVEVVFLKSPRTTSIENRYG---SDPDTRESFL--ISAADPFTESDLAF- 117
Query: 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLW---PSEEAARE 207
+G H + + + + LS D + + E
Sbjct: 118 --IEGEAVHINPLWY-----GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 170
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267
D+ KV E LTG +D + + K+++ T S G +
Sbjct: 171 MKEKYLKYLDLFKVDSREAETLTGTNDLRE---SCRIIRSFGAKIILATHAS-GVIVFDG 226
Query: 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327
F TG GD+ + L + K + + +A FA A ++ +
Sbjct: 227 NFY-EASFRSWSLEGRTGRGDTCTAAFLVGF-----VFKKMS-IEKATKFAAAVTSVKMR 279
Query: 328 ERGA 331
G
Sbjct: 280 HPGP 283
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 5e-54
Identities = 49/295 (16%), Positives = 99/295 (33%), Gaps = 29/295 (9%)
Query: 56 FKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART 115
K + GG N+A ++R+G ++ F+ LG+DE G + K+ T
Sbjct: 37 VKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGST 96
Query: 116 ALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLI-AEPCRS 172
L +GE + + +D + + ++ ++
Sbjct: 97 PTYLAILDENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYT------VLDSDNPEI 149
Query: 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGG 232
+ N ++ IL DP + + + IK + E L G
Sbjct: 150 MEYLLKNFKDKTNFIL--DPV------SA--EKASWVKHLIKDFHTIKPNRHEAEILAGF 199
Query: 233 DDHNDDNVVL--EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290
+ D+++ +K + ++ + G Y G++ + + TGAGDSF
Sbjct: 200 PITDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSF 259
Query: 291 VSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
V+G+ + + + FA +T++ I + L L
Sbjct: 260 VAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMALDTVLAKL 307
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 3e-52
Identities = 81/354 (22%), Positives = 131/354 (37%), Gaps = 48/354 (13%)
Query: 5 HNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFV------PTVGGVSLAEAPAFKK 58
H+ +SG + M G V+C G ++D + P G L +
Sbjct: 8 HHHSSGRENLYFQGHMVKEPGGKH--VLCVGAAVLDTLFRVADMPKGEGKVLPYE--VLQ 63
Query: 59 APGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALA 118
G ++ A + R+GG ++ G +GDDE G + L E+ +DTSG+ AR+AL+
Sbjct: 64 IAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALS 123
Query: 119 FVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAE---PCRST 173
+ + GER + P D L E + I ++ + P
Sbjct: 124 TIIIDNRGERLIV----PFYDHRLHEKKRACTPEDIALFDA-------VLVDVRWP--EL 170
Query: 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233
L + +A+ G D + A E + + A I S+ T LTG +
Sbjct: 171 ALDVLTVARALGKPAILDGD---V------APVETLEGLAPAATHIVFSEPAATRLTGLE 221
Query: 234 DHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG--RVPGVKTKAVDTTGAGDSFV 291
D VL + + VT G GC + + ++ +AVDT AGD F
Sbjct: 222 TVKDMLPVLHARYPQT--FIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFH 279
Query: 292 SGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
+A R A+ ++ AL T G PT+E + +
Sbjct: 280 GTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAM 326
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 4e-52
Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 46/306 (15%)
Query: 53 APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112
++ A GG AN AV R G + AF+ GDD G + L +N+D + V
Sbjct: 33 GNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKG 92
Query: 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPC 170
T +A + + +GE H A+ L + ++ I S
Sbjct: 93 ESTGVALIFVNGEGENVIGI--HAGANAALSPALVEAQRERIANASAL------------ 138
Query: 171 RSTQL--------AAMNLAKESGSILSYDPNLRLPLWPSEEA-AREGIMSIWDQADIIKV 221
QL AA +A ++ +I++ +P A ARE + DII
Sbjct: 139 -LMQLESPLESVMAAAKIAHQNKTIVALNP-----------APARELPDELLALVDIITP 186
Query: 222 SDDEITFLTGGDDHNDDNV--VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTK 279
++ E LTG ND++ + L ++ +++T GS+G RVPG + +
Sbjct: 187 NETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQ 246
Query: 280 AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339
AVDT AGD+F ++ L ++ L EA+ FA+A A+ VT +GA P++P +E
Sbjct: 247 AVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPWRE 299
Query: 340 AALKLL 345
L
Sbjct: 300 EIDAFL 305
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 5e-52
Identities = 52/318 (16%), Positives = 104/318 (32%), Gaps = 48/318 (15%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDD 87
+ FG + ID + +V + + GG N A+ + +G
Sbjct: 23 LAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK 82
Query: 88 EFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESEL 147
LA ++ ++T V + ++ DG+++ F H A +
Sbjct: 83 THREYLAM-IESMGINTGHVEKFEDESGPICYIA--TDGKKQVSFM-HQGA-----MAAW 133
Query: 148 DKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAARE 207
L + H+ ST +++AK S + +DP+ + + +E
Sbjct: 134 APQLADEYEYVHF-----------STGPNYLDMAKSIRSKIIFDPSQEIHKYSKDE---- 178
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267
+ + + + +D E + V IVT G +G +
Sbjct: 179 -LKKFHEISYMSIFNDHEYRVFREMTGLSSPKVT-----------TIVTNGERGSSLFMD 226
Query: 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327
K P + + DT GAGDSF +G+ L ++ + + +++ V
Sbjct: 227 GKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHH-VI 277
Query: 328 ERGAIPALPTKEAALKLL 345
+ G E +
Sbjct: 278 DDGIENFSLNMEDLERET 295
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 169 bits (432), Expect = 1e-50
Identities = 69/302 (22%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 56 FKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART 115
K GG AN A+ +R+ + F+ K+G D + K ++DTS + + A+T
Sbjct: 35 QKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKT 94
Query: 116 ALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPCRST 173
AF+T+ A+G+ + A+M + ++ I
Sbjct: 95 GQAFITVNAEGQNTIYV--YGGANMTMTPEDVINAKDAIINADFV-------------VA 139
Query: 174 QL--------AAMNLAKESGSILSYDPNLRLPLWPSEEA-AREGIMSIWDQADIIKVSDD 224
QL +A +AK G +P A A+ + DII ++
Sbjct: 140 QLEVPIPAIISAFEIAKAHGVTTVLNP-----------APAKALPNELLSLIDIIVPNET 188
Query: 225 EITFLTGGDDHNDDNV--VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVD 282
E L+G N+ ++ +K +++T G +G + TK + K A+D
Sbjct: 189 EAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAID 248
Query: 283 TTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342
TT AGD+F+ + L K ++ L +A+ F N +LTV + GA ++P E
Sbjct: 249 TTAAGDTFIGA----FVS--RLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVN 302
Query: 343 KL 344
++
Sbjct: 303 QV 304
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 5e-49
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 45/305 (14%)
Query: 53 APAFKKAPGGAPANVAVGISRLGGSS-AFVGKLGDDEFGYMLANILKENNVDTSGVRYDS 111
A PGG AN AV ++++G FV +G+D++ +L ++ +
Sbjct: 43 AIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGITGYIR---V 99
Query: 112 TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 171
+ T AF+ + G+ + P A+ L + +D N + + I
Sbjct: 100 SLPTGRAFIEVDKTGQNRIII--FPGANAELKKELIDWNTLSESDIL------------- 144
Query: 172 STQL-----AAMNLAKESGSILSYDPNLRLPLWPSEEA-AREGIMSIWDQADIIKVSDDE 225
Q + AK I+ +DP A A+ I+ D + ++ E
Sbjct: 145 LLQNEIPFETTLECAKRFNGIVIFDP-----------APAQGINEEIFQYLDYLTPNEKE 193
Query: 226 ITFLTGGDDHNDDNV--VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDT 283
I L+ V EK +K +IV G KG K K P K KAVDT
Sbjct: 194 IEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDT 253
Query: 284 TGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343
T AGD F L+ +N EA++F A A++VT GA ++P +E
Sbjct: 254 TAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPAREEVEA 306
Query: 344 LLHTV 348
L +
Sbjct: 307 FLKNL 311
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 4e-48
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 43/307 (14%)
Query: 53 APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112
F GG AN V +RLG ++ V K+G D FG LK+N++ T
Sbjct: 53 GHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKD 112
Query: 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPC 170
A T A + + +G+ + A++LL +L N+I + +
Sbjct: 113 AATGTASIIVNNEGQNIIVI--VAGANLLLNTEDLRAAANVISRAKVM------------ 158
Query: 171 RSTQL--------AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVS 222
QL A+ +A+ SG ++P P A + + +D+ +
Sbjct: 159 -VCQLEITPATSLEALTMARRSGVKTLFNPA---P------AIADLDPQFYTLSDVFCCN 208
Query: 223 DDEITFLTG--GDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE--FKGRVPGVKT 278
+ E LTG D L +++I+T G++GC ++ +P K
Sbjct: 209 ESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV 268
Query: 279 KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338
KAVDTTGAGDSFV + LA NL L + L +N A++V G + P K
Sbjct: 269 KAVDTTGAGDSFVGALAFYLAYYPNL-----SLEDMLNRSNFIAAVSVQAAGTQSSYPYK 323
Query: 339 EAALKLL 345
+ L
Sbjct: 324 KDLPLTL 330
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 4e-46
Identities = 64/295 (21%), Positives = 99/295 (33%), Gaps = 42/295 (14%)
Query: 53 APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112
A + + PGG AN AV +R G F G GDD L L+ N V
Sbjct: 48 AASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG 107
Query: 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIA--EPC 170
+ A + + A E L P A+ L + + + L+ E
Sbjct: 108 P-SGTAIIVVDASAENTVLV--APGANAHLTPVP---SAVANCDV-------LLTQLEIP 154
Query: 171 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230
+T LAA A+ + +++ + + P + ++ + AD++ ++ E
Sbjct: 155 VATALAAARAAQSADAVVMVNAS---PAGQDRSSLQD----LAAIADVVIANEHEANDWP 207
Query: 231 GGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290
H ++T G +G RY + VP VDT GAGD F
Sbjct: 208 SPPTH-----------------FVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVF 250
Query: 291 VSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
+ + + AL A A GAL G P A L
Sbjct: 251 AGVLAANWPRNPGSPAE---RLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 302
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-45
Identities = 60/291 (20%), Positives = 101/291 (34%), Gaps = 20/291 (6%)
Query: 56 FKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART 115
+ + GG N A +SRLG + G D G ++A ++ V+ + + T
Sbjct: 34 WMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRR-T 92
Query: 116 ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQL 175
L DG L K + +I + A T
Sbjct: 93 PSYTAILERDGNLVIAL--ADMDLYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLT 150
Query: 176 AAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH 235
A +A+ L+ + + + + + DI+ +++ E LTG
Sbjct: 151 ALGLIARACEKPLAAIA---ISPAKAVK-----LKAALGDIDILFMNEAEARALTGETAE 202
Query: 236 NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK-EFKGRVPGVKTKAVDTTGAGDSFVSGI 294
N + L L +VT G+ + E P + + D TGAGD+ SG
Sbjct: 203 NVRDWP-NILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGY 261
Query: 295 LNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345
L +A + + REAL A A+TV A +K++ +L
Sbjct: 262 LAAIAEGKTI-------REALRQGAAAAAITVQSSFATSQDLSKDSVEAML 305
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 6e-44
Identities = 58/304 (19%), Positives = 99/304 (32%), Gaps = 59/304 (19%)
Query: 53 APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112
+ GG AN A+ +SR G + + G+D G + +K + + +
Sbjct: 31 GVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQ 90
Query: 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPC 170
+ + + ADG+ + +A E+ G I
Sbjct: 91 H-SDTSIILNSADGDNAIIT--TTAAADTFSLDEMIPHMADAVAGDIL------------ 135
Query: 171 RSTQL--------AAMNLAKESGSILSYDPNLRLPLWPSEEA-AREGIMSIWDQADIIKV 221
Q A A+ G ++P + +W DI V
Sbjct: 136 -LQQGNFSLDKTRALFQYARSRGMTTVFNP-----------SPVNPDFCHLWPLIDIAVV 183
Query: 222 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAV 281
++ E L L++T+G+ G + + P V +A+
Sbjct: 184 NESEAELLQPYGVKT----------------LVITQGAAGAWLVQEGQRQFCPAVPAEAL 227
Query: 282 DTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341
DTTGAGD+F++ +L AL A+ A+TV+ RG + A P
Sbjct: 228 DTTGAGDTFLAVMLASALLRGVAP-----DALALAHASRAAAITVSRRGTLSAFPGSREL 282
Query: 342 LKLL 345
LL
Sbjct: 283 AALL 286
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 5e-33
Identities = 60/302 (19%), Positives = 112/302 (37%), Gaps = 30/302 (9%)
Query: 50 LAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109
+ +A GG+ N A G++ LGG +A+ G + D+ G + + ++ V
Sbjct: 69 YSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPK 128
Query: 110 DSTARTA--LAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIA 167
+ TA + FVT DGER + + L +++ +++ + ++
Sbjct: 129 GAFPPTARSMIFVT--EDGERSMNTYLGACVE--LGPEDVEADVVADAKVTYFEGYLWDP 184
Query: 168 EPCRSTQLAAMNLAKESGSILSY---DPNLRLPLWPSEEAAREGIMSI--WDQADIIKVS 222
+ L +A + G +S D + R + + + DI+ +
Sbjct: 185 PRAKEAILDCARIAHQHGREMSMTLSDSFC-------VDRYRGEFLDLMRSGKVDIVFAN 237
Query: 223 DDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVK-TKAV 281
E L DD + L ++ + K+ VT G + V ++ + V
Sbjct: 238 RQEALSLYQTDDFEE---ALNRI-AADCKIAAVTMSENGAVILKGRERYYVNAIRIREVV 293
Query: 282 DTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341
DTTGAGD F SG L ++ L + + + + G P EAA
Sbjct: 294 DTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAAGIVIQQIGPRPMTSLSEAA 346
Query: 342 LK 343
+
Sbjct: 347 KQ 348
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 7e-27
Identities = 55/321 (17%), Positives = 106/321 (33%), Gaps = 54/321 (16%)
Query: 49 SLAEAPAFKKAPGGAPAN---VAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105
L E + GG+ N VA I + ++ F G +G DE+ +L N V+
Sbjct: 68 ELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQ 127
Query: 106 GVRYDSTA-RTALAFVTLRADGEREFLFF----RHPSADMLLCESELDKNLIKQGSIFH- 159
R ++ T VT +R + + L S+ ++ ++ F+
Sbjct: 128 YQRSATSPTGTCAVLVT---GTQRSLCANLAAANDFTPEHL--RSDGNRAYLQGAQFFYV 182
Query: 160 --YGSISLIAEPCRSTQLAAMNLAKESGSI----LSYDPNLRLPLWPSEEAAREGIMSIW 213
+ + L+ A +G + LS P + + + + I+
Sbjct: 183 SGF----FF-TVSFESALSVAKEAAATGRMFMMNLS-APFV-------PQFYKNNLEEIF 229
Query: 214 DQADIIKVSDDEITFLTGGDDHNDDNVV--------LEKLFHPNLKLLIVTEGSKGCRYY 265
D++ ++ E L ++ +++ L K +++I+T+GS
Sbjct: 230 PYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLI 289
Query: 266 TKEFKGRV-----PGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANA 320
+ VDT GAGD+FV G L L + + +
Sbjct: 290 EAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT-------VDVCIKCGIW 342
Query: 321 CGALTVTERGA-IPALPTKEA 340
+ G P+ A
Sbjct: 343 AAREIIQRSGCTFEGEPSFCA 363
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-27
Identities = 60/317 (18%), Positives = 113/317 (35%), Gaps = 54/317 (17%)
Query: 49 SLAEAPAFKKAPGGAPANVAV----GISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104
L + + GG+ N I + ++ F G +G D+FG +L E +VD
Sbjct: 51 ELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDA 110
Query: 105 SGVRYDSTARTA--LAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIF 158
+ T A +T D L +A+ E LD L+++ +
Sbjct: 111 H-YYEQNEQPTGTCAACIT--GDNRS--LIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165
Query: 159 H---YGSISLIAEPCRSTQLAAMNLAKESGSI----LSYDPNLRLPLWPSEEAAREGIMS 211
+ + + + L + A E+ I LS P + + +E +M
Sbjct: 166 YIAGF----FLTV-SPESVLKVAHHASENNRIFTLNLS-APFI-------SQFYKESLMK 212
Query: 212 IWDQADIIKVSDDEITFLTGGDDHNDDNVV--------LEKLFHPNLKLLIVTEGSKGCR 263
+ DI+ ++ E ++ L K+ +++I T+G
Sbjct: 213 VMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTI 272
Query: 264 YYTKEFKGRVPGV---KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANA 320
T+ + + + +DT GAGD+FV G L+ L +D+ L E + +
Sbjct: 273 MATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIRAGHY 325
Query: 321 CGALTVTERGA-IPALP 336
++ + G P P
Sbjct: 326 AASIIIRRTGCTFPEKP 342
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 3e-26
Identities = 58/328 (17%), Positives = 101/328 (30%), Gaps = 72/328 (21%)
Query: 57 KKAPGGAPANVAVGISRL---GGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTA 113
PGG+ N + +L GS+ ++G +GDD G +L + + + T
Sbjct: 84 TSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATR-FMVAPGQ 142
Query: 114 RTA--LAFVTLRADGERE---FLFFRHPSADMLLCESELDKNLIKQGSIFH---YGSISL 165
T + + ER L A E IF+ Y
Sbjct: 143 STGVCAVLIN---EKERTLCTHL-----GACGSFRLPEDWTTFASGALIFYATAY----T 190
Query: 166 IAEPCRSTQLAAMNLAKESGSI----LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 221
+ ++ A +I LS P E ++ + S+ +I+
Sbjct: 191 LTATPKNALEVAGYAHGIPNAIFTLNLS-APFC-------VELYKDAMQSLLLHTNILFG 242
Query: 222 SDDEITFLTGGDDHNDDNVVLEKLFHPNL---------------------KLLIVTEGSK 260
+++E L + + KL+++T G
Sbjct: 243 NEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHN 302
Query: 261 GCRYYTKEFKG-------RVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLR 312
+ G VP V K VDT GAGD+FV G L L+ + ++
Sbjct: 303 PVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VK 355
Query: 313 EALLFANACGALTVTERGAIPALPTKEA 340
+ ++ NAC + G +
Sbjct: 356 QCIMCGNACAQDVIQHVGFSLSFTFTSG 383
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 3e-26
Identities = 57/321 (17%), Positives = 104/321 (32%), Gaps = 62/321 (19%)
Query: 50 LAEAPAFKKAPGGAPANVA-----VGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104
+ + P + PGG+ NVA + + G +VG + DD +G +L + +
Sbjct: 53 IEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVM 112
Query: 105 SGVRYDSTARTA--LAFVTLRADGERE---FLFFRHPSADMLLCESELDK----NLIKQG 155
+ V + + A + +T ER L A L + + +
Sbjct: 113 A-VEHTTKAGSGACAVCIT---GKERTLVADL-----GAANHLSSEHMRSPAVVRAMDES 163
Query: 156 SIFH---YGSISLIAEPCRSTQLAAMNLAKESGSI----LSYDPNLRLPLWPSEEAAREG 208
IF+ + + L A A+E + LS P + +
Sbjct: 164 RIFYFSGF-----TLTVDVNHVLQACRKAREVDGLFMINLS-APFI-------MQFFSAQ 210
Query: 209 IMSIWDQADIIKVSDDEITFLTGGDDHNDDNV--------VLEKLFHPNLKLLIVTEGSK 260
+ + DII + E + D V ++++ T +
Sbjct: 211 LGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIE 270
Query: 261 GCRYYTKEFKGRVPG---VKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLF 317
TK+ VP + K +D GAGD+F+ G L+ A ++ LR
Sbjct: 271 STVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKD-------LRRCCET 323
Query: 318 ANACGALTVTERGA-IPALPT 337
+ + G P P+
Sbjct: 324 GHYTAQEVIQRDGCSFPEKPS 344
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 1e-13
Identities = 66/310 (21%), Positives = 116/310 (37%), Gaps = 37/310 (11%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
+ G++ A A K GG NV+ + L S +G G G + + L + +
Sbjct: 21 KIDGLNRATAT--YKFAGGKGINVSRVLKTLDVESTALGFAGGF-PGKFIIDTLNNSAIQ 77
Query: 104 TSGVRYDSTARTALAFVTLRADGEREFLF--FRHPSADMLLCESELDKNLIKQGSIFHY- 160
++ + D R V L+ E E S ++ I
Sbjct: 78 SNFIEVDEDTRIN---VKLKTGQETEINAPGPHITSTQFEQLLQQIKN--TTSEDIVIVA 132
Query: 161 GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220
GS+ Q+A + ++G+ L D +E A + IK
Sbjct: 133 GSVPSSIPSDAYAQIAQ--ITAQTGAKLVVDA--------EKELAESVLPY---HPLFIK 179
Query: 221 VSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT 278
+ DE+ + ++D +V+ L + +IV+ G G Y KE + +
Sbjct: 180 PNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG 239
Query: 279 KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338
K V+T G+GDS V+G++ +A+ ++ +A A ACG T + L T+
Sbjct: 240 KVVNTVGSGDSTVAGMVAGIASGLSIE-------KAFQQAVACGTATAFDED----LATR 288
Query: 339 EAALKLLHTV 348
+A K+ V
Sbjct: 289 DAIEKIKSQV 298
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 1e-13
Identities = 60/309 (19%), Positives = 111/309 (35%), Gaps = 32/309 (10%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
+ + GG +V+ +S+ G + +G G D L ILKE +++
Sbjct: 24 EKRKTNRVIKT--EFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHIN 80
Query: 104 TSGVR-YDSTARTALAFVTLRADGEREFLF--FRHPSADMLLCESELDKNLIKQGSIFHY 160
+ ++ R ++ +G F + ++ K +K+ +
Sbjct: 81 HDFLVEAGTSTRECFVVLSDDTNGSTMIPEAGFTVSQTNKDNLLKQIAK-KVKKEDMVVI 139
Query: 161 -GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 219
GS +L K +G+ L D S E + D I
Sbjct: 140 AGSPPPHYTLSDFKELLRT--VKATGAFLGCDN--------SGEYLNLAVEM---GVDFI 186
Query: 220 KVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTK 279
K ++DE+ + ++ + + + + L+V+ G+KG +V K +
Sbjct: 187 KPNEDEVIAILDEKTNSLEENI--RTLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQ 244
Query: 280 AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339
+ TGAGD FV + LA + + E L A C A V ++ + + E
Sbjct: 245 ERNDTGAGDVFVGAFIAGLAMNMPIT-------ETLKVATGCSASKVMQQDS--SSFDLE 295
Query: 340 AALKLLHTV 348
AA KL + V
Sbjct: 296 AAGKLKNQV 304
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-13
Identities = 65/310 (20%), Positives = 125/310 (40%), Gaps = 37/310 (11%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
G V+ +E +K PGG NV+ + RLG + +G LG G + N L++ +
Sbjct: 21 QQGVVNRSERD--RKQPGGKGINVSRVLKRLGHETKALGFLGGF-TGAYVRNALEKEEIG 77
Query: 104 TSGVRYDSTARTALAFVTLRADGEREFLF--FRHPSADMLLCESELDKNLIKQGSIFHY- 160
S + + R V ++ E E + +L + +++G +
Sbjct: 78 LSFIEVEGDTRIN---VKIKGKQETELNGTAPLIKKEHVQALLEQLTE--LEKGDVLVLA 132
Query: 161 GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220
GS+ + +AKE G+ ++ D S EA E + + + IK
Sbjct: 133 GSVPQAMPQTIYRSMTQ--IAKERGAFVAVDT--------SGEALHEVLAA---KPSFIK 179
Query: 221 VSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT 278
+ E++ L + ++ + +++L ++ ++V+ G + + E V
Sbjct: 180 PNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSG 239
Query: 279 KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338
+ ++ GAGDS V+G L L ++L +A+ FA A G+ T G T+
Sbjct: 240 EVRNSVGAGDSVVAGFLAALQEGKSLE-------DAVPFAVAAGSATAFSDG----FCTR 288
Query: 339 EAALKLLHTV 348
E +L +
Sbjct: 289 EEVERLQQQL 298
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-13
Identities = 67/313 (21%), Positives = 111/313 (35%), Gaps = 35/313 (11%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
+ V+ K PGG NV I LGG G LG G +AN LK+ N+
Sbjct: 23 KLDTVNRTSQV--TKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIP 79
Query: 104 TSGVRYDSTARTALAFVTLRADGER-EFLF--FRHPSADMLLCESELDKNLIKQGSIFHY 160
+ R + + + +G + E L ++ D+ LIKQ I
Sbjct: 80 QAFTSIKEETRDS---IAILHEGNQTEILEAGPTVSPEEISNFLENFDQ-LIKQAEIVTI 135
Query: 161 -GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 219
GS++ +L A + D S ++ R+ + W + +I
Sbjct: 136 SGSLAKGLPSDFYQELVQK--AHAQEVKVLLDT--------SGDSLRQVLQGPW-KPYLI 184
Query: 220 KVSDDEITFLTGGDDHNDDNV----VLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPG 275
K + +E+ L G D + L K ++ ++++ G G + RV
Sbjct: 185 KPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKI 244
Query: 276 VKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335
+A + G+GD+ ++G+ LA D E L + A G ER
Sbjct: 245 PTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT--GH 295
Query: 336 PTKEAALKLLHTV 348
E K L +
Sbjct: 296 VDVENVKKHLMNI 308
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 6e-13
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 32/311 (10%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
G AP PGG NVA I+ LGGS+ + G G L ++L + NV
Sbjct: 23 YPEGKLRCTAP--VFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVP 79
Query: 104 TSGVRYDSTARTALAFVTLRADGEREFLF--FRHPSADMLLCESELDKNLIKQGSIFHY- 160
+ V R L + + F+ + E ++ + I+ G+I
Sbjct: 80 VATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLE--IESGAILVIS 137
Query: 161 GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220
GS+ + + TQL + A++ G D S EA + +++K
Sbjct: 138 GSLPPGVKLEKLTQLISA--AQKQGIRCIVDS--------SGEALSAALAI--GNIELVK 185
Query: 221 VSDDEITFLTGGDDHNDDNVV--LEKLFHP-NLKLLIVTEGSKGCRYYTKEFKGRVPGVK 277
+ E++ L + D+V +++ + K ++V+ G +G E +V
Sbjct: 186 PNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPP 245
Query: 278 TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337
K+ T GAGDS V + LA + + L E + F A G+ +G L +
Sbjct: 246 VKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGT--RLCS 296
Query: 338 KEAALKLLHTV 348
+ K+ +
Sbjct: 297 HDDTQKIYAYL 307
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 7e-13
Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 34/312 (10%)
Query: 44 TVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103
+ V+ + K GG NV ++++G G +G + G +A L ++
Sbjct: 41 KLDDVNRVQEV--SKTAGGKGLNVTRVLAQVGEPVLASGFIGGE-LGQFIAKKLDHADIK 97
Query: 104 TSGVRYDSTARTALAFVTLRADGER-EFLF--FRHPSADMLLCESELDKNLIKQGSIFHY 160
+ R + + +G++ E L + + ++ ++++
Sbjct: 98 HAFYNIKGETRNC---IAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQ-MMEKVEAVAI 153
Query: 161 -GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 219
GS+ Q+ + G + D S + + + + + +I
Sbjct: 154 SGSLPKGLNQDYYAQIIER--CQNKGVPVILDC--------SGATLQTVLENPY-KPTVI 202
Query: 220 KVSDDEITFLTGGDDHNDDNVVLE---KLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV 276
K + E+ L + + + ++ +IV+ G++G RV
Sbjct: 203 KPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIP 262
Query: 277 KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALP 336
++ G+GDS V+GI + + +N + L AN G L E
Sbjct: 263 TISVLNPVGSGDSTVAGITSAILNHENDH-------DLLKKANTLGMLNAQEAQT--GYV 313
Query: 337 TKEAALKLLHTV 348
L + +
Sbjct: 314 NLNNYDDLFNQI 325
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 4e-08
Identities = 54/299 (18%), Positives = 97/299 (32%), Gaps = 33/299 (11%)
Query: 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN--VDTSGVRYDSTARTAL 117
PGG NV++ +S+LG S G +G G +L L++ + + T+ V + R +
Sbjct: 50 PGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEGETRENI 108
Query: 118 AFVTLRADGEREFLF--FRHPSADMLLCESELDKNLIKQGSIFHY-GSISLIAEPCRSTQ 174
+ + F D+ + + GSI +
Sbjct: 109 EIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKM-TLSKVDCVVISGSIPPGVNEGICNE 167
Query: 175 LAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVS-DDEITFLTGGD 233
L + A+E G + + + + +++K G D
Sbjct: 168 LVRL--ARERGVFVFVEQ--------TPRLLERIY-EGPEFPNVVKPDLRGNHASFLGVD 216
Query: 234 DHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDS 289
D+ V EKL ++ +V+ K T+E + R + GAGD+
Sbjct: 217 LKTFDDYVKLAEKLAE-KSQVSVVSYEVKNDIVATREGVWLIRSK-EEIDTSHLLGAGDA 274
Query: 290 FVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTV 348
+V+G+ + IK E F A + +P EA K
Sbjct: 275 YVAGM---VYY---FIKHGANFLEMAKFGFASALAATRRKE--KYMPDLEAIKKEYDHF 325
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 6e-07
Identities = 43/331 (12%), Positives = 94/331 (28%), Gaps = 69/331 (20%)
Query: 20 MDGGSGAYDRLVVCFGEMLIDFVPT------VGGVSLAEAPAFKKAPG----GAPANVA- 68
MD +G + + ++L F V K + V+
Sbjct: 7 MDFETGEHQ---YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 69 ----VGISRLGGSSA---FVGKLGDDEFGYMLANILKENNVDTSG--VRYDSTARTALAF 119
FV ++ + ++++ I E S Y
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIEQRD----- 117
Query: 120 VTLRADGEREFLFFRH--PSADMLLCESELDKNLIK----QGSIFH----YGSISLIAEP 169
L D + +F ++ L +L + L++ + + G + +
Sbjct: 118 -RLYNDNQ---VFAKYNVSRLQPYL---KLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 170 CRSTQLAA--------MNLAK--ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 219
C S ++ +NL ++L L + P+ + + +I + I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 220 KVSDDEITFLTGGDDHND-----DNV----VLEKLFHPNLKLLIVTEGSKGCRYYTKEFK 270
+ E+ L + + NV F+ + K+L+ T + + +
Sbjct: 231 Q---AELRRLLKSKPYENCLLVLLNVQNAKAWNA-FNLSCKILLTTRFKQVTDFLSAATT 286
Query: 271 GRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301
+ T S + L+C D
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.92 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.92 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.88 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.86 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.86 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.82 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.81 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.81 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.76 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.6 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.59 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.22 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 99.11 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 99.06 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 99.02 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.75 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.72 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.71 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 98.53 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.38 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.26 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 98.16 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 98.08 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.34 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-53 Score=390.97 Aligned_cols=314 Identities=37% Similarity=0.606 Sum_probs=268.9
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...+..|.. +..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||++++
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~ 81 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDG 81 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBCTT
T ss_pred CCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCcee
Confidence 4678999999999999988776543 667889999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++.++.+|++++.+++.++++..++++++....+++++++|++++.+..+...+.+.++++.+++.+.
T Consensus 82 v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~ 161 (338)
T 3ljs_A 82 IVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGA 161 (338)
T ss_dssp CEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCC
Confidence 99888889999999998889999888877788888888888777789999999998877777778899999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++....++ .+++++|++.|++.||||.|++|++++.
T Consensus 162 ~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~-~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 240 (338)
T 3ljs_A 162 IVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADA-NAVIQQLWQGRAQLLLVTDAAGPVHWYT 240 (338)
T ss_dssp EEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCH-HHHHHHHTTTTCCEEEEEETTEEEEEEE
T ss_pred EEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhH-HHHHHHHHhcCCCEEEEeeCCCceEEEE
Confidence 999999988888866555677888899999999999999999998665443 2367888899999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhc--------------CCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--------------QNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g--------------~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+++.+++|+++++++|||||||+|+|||+++|++| .+ +++|+++|+++|++++++.|+.
T Consensus 241 ~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~A~~~aa~~v~~~Ga~ 313 (338)
T 3ljs_A 241 RTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRFAAAVGALAVTRQGAF 313 (338)
T ss_dssp SSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHHHHHHHGGGC----CC
T ss_pred CCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHHHHHHHHHHhCCCCCC
Confidence 98999999999999999999999999999999999 56 9999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
+++|+.++|+++++++.
T Consensus 314 ~~~p~~~ev~~~~~~~~ 330 (338)
T 3ljs_A 314 TAMPMLSEVLSLIQEQS 330 (338)
T ss_dssp CCTTHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhhhc
Confidence 89999999999998764
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-52 Score=379.76 Aligned_cols=310 Identities=26% Similarity=0.401 Sum_probs=278.1
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...++.|......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 7 ~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 86 (319)
T 3pl2_A 7 STHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQY 86 (319)
T ss_dssp CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEECTT
T ss_pred cCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCcccc
Confidence 46789999999999999888877777778899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcc-cccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSA-DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.+.++.+|+.+++.++.+|++.+.+++.+++ +..+++++++...+++++++|++++.+..+...+....+++.+++ +
T Consensus 87 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 165 (319)
T 3pl2_A 87 VATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRAN-R 165 (319)
T ss_dssp EEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-C
T ss_pred EEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHHHHHHHHHH-C
Confidence 98888889999999888888888888766655 667888888778889999999999866555555666677776665 6
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||+++..+|.+++...+.+.++++++|++++|++|++.+++..+ ..+.+++|++.|++.|+||.|++|++++
T Consensus 166 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 242 (319)
T 3pl2_A 166 RHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE---PERAGRALLERGVELAIVKQGPKGVMAM 242 (319)
T ss_dssp SCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS---HHHHHHHHHHTTCSEEEEEEETTEEEEE
T ss_pred CcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC---HHHHHHHHHhcCCCEEEEEECCCCeEEE
Confidence 7789999999889988888888999999999999999999999998753 3446788888999999999999999999
Q ss_pred ecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 266 TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 266 ~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+...+|+.+|+++++
T Consensus 243 ~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l 315 (319)
T 3pl2_A 243 TKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLECSTAMPTTDEVEASL 315 (319)
T ss_dssp CSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSCSGGGCCCHHHHHHHC
T ss_pred ECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcCCCCCHHHHHHHH
Confidence 98889999999999999999999999999999999999 99999999999999999999987889999999998
Q ss_pred hh
Q 018696 346 HT 347 (351)
Q Consensus 346 ~~ 347 (351)
++
T Consensus 316 ~~ 317 (319)
T 3pl2_A 316 NQ 317 (319)
T ss_dssp C-
T ss_pred hc
Confidence 64
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-51 Score=374.00 Aligned_cols=311 Identities=27% Similarity=0.419 Sum_probs=268.6
Q ss_pred CceEEEEccceeecccCCCCCCCCC-CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAE-APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~-~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
+++|+|+|++++|++...++..... ......++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 82 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRG 82 (330)
T ss_dssp -CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCeee
Confidence 3589999999999997643322211 112356889999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++.++.+|++.+.+++...+...++++++....+++++++|++++....+...+.+.++++.+++++.
T Consensus 83 v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~ 162 (330)
T 3iq0_A 83 ISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG 162 (330)
T ss_dssp EEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCC
Confidence 99888889999999998889986666655556667888888777899999999999876566667888999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|... ...+.+.++++++|++++|++|++.+++..+ ..+++++|.+.|++.||||.|++|++++.
T Consensus 163 ~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 238 (330)
T 3iq0_A 163 VISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHST---PERAIAGFLEEGVKEVIVKRGNQGASYYS 238 (330)
T ss_dssp EEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCSS---HHHHHHHHHHHTCSEEEEECGGGCEEEEC
T ss_pred EEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCCC---HHHHHHHHHHcCCCEEEEEeCCCceEEEE
Confidence 9999999887777654 4677888899999999999999999998743 34467888888999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+++.+++|+++++++|+|||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+.+|+.++++++++
T Consensus 239 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~~~ 311 (330)
T 3iq0_A 239 ANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQ 311 (330)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHHHH
T ss_pred CCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHH
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999998
Q ss_pred hhc
Q 018696 347 TVA 349 (351)
Q Consensus 347 ~~~ 349 (351)
+..
T Consensus 312 ~~~ 314 (330)
T 3iq0_A 312 RHD 314 (330)
T ss_dssp HC-
T ss_pred hcc
Confidence 654
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=368.88 Aligned_cols=316 Identities=27% Similarity=0.441 Sum_probs=271.9
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++......+......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~ 89 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSN 89 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcc
Confidence 45689999999999998766655545567789999999999999999999999999999999999999999999999999
Q ss_pred eeecC-CCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 107 VRYDS-TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 107 v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.+.+ +.+|+.+++.++.+|++++.+++...++..++++++....+++++++|++++....+...+.+.++++.+++.+
T Consensus 90 v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g 169 (332)
T 2qcv_A 90 LVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRND 169 (332)
T ss_dssp EEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTT
T ss_pred eEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCC
Confidence 98775 46899998887777888887776556677788888876678999999999876555555678888999999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||+.+...|...+...+.+.++++++|++++|++|++.+++....++..+.+++|++.|++.|+||.|++|++++
T Consensus 170 ~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 249 (332)
T 2qcv_A 170 VKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAY 249 (332)
T ss_dssp CEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEE
T ss_pred CEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEEECCcceEEE
Confidence 99999999877778777777778888999999999999999999987532334556788999999999999999999998
Q ss_pred ec-CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHH
Q 018696 266 TK-EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKL 344 (351)
Q Consensus 266 ~~-~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~ 344 (351)
.+ ++.+++|+++++++|++||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.++++++
T Consensus 250 ~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 322 (332)
T 2qcv_A 250 TKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKHSSSDAMPSVEEIEAL 322 (332)
T ss_dssp ETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-----CCCCHHHHHHH
T ss_pred ecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCccCCCCHHHHHHH
Confidence 87 678899999999999999999999999999999999 9999999999999999999998889999999999
Q ss_pred Hhhhc
Q 018696 345 LHTVA 349 (351)
Q Consensus 345 l~~~~ 349 (351)
+++..
T Consensus 323 l~~~~ 327 (332)
T 2qcv_A 323 IEKDE 327 (332)
T ss_dssp HHHTC
T ss_pred HhcCC
Confidence 97654
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-51 Score=374.14 Aligned_cols=313 Identities=29% Similarity=0.422 Sum_probs=262.5
Q ss_pred cccccCCCCCCCCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHH
Q 018696 16 LSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLAN 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~ 95 (351)
++.+|. ++++|+|+|++++|++...++. ......+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++
T Consensus 19 ~~~~m~-----~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~ 92 (336)
T 4du5_A 19 YFQSMT-----SALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLA 92 (336)
T ss_dssp ------------CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHH
T ss_pred eeeccC-----CCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHH
Confidence 555665 4689999999999999876542 3356677899999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCeeecCCCCCeEEEEEEecCC-CceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHH
Q 018696 96 ILKENNVDTSGVRYDSTARTALAFVTLRADG-EREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRST 173 (351)
Q Consensus 96 ~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~ 173 (351)
.|++.||+++++.+.++.+|+.+++.++.+| ++.+.+++..++...+++++++...+++++++|++++.. ..+...+.
T Consensus 93 ~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~ 172 (336)
T 4du5_A 93 AMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPA 172 (336)
T ss_dssp HHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHH
T ss_pred HHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHH
Confidence 9999999999999888899999999888888 455556666777788888888878899999999988654 45556788
Q ss_pred HHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEE
Q 018696 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLL 253 (351)
Q Consensus 174 ~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~v 253 (351)
+.++++.+++.+.++++||+.+...|...+.+.+.+.++++++|++++|++|++.+++..+ ..++++.|.+.|++.|
T Consensus 173 ~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~---~~~~~~~l~~~g~~~v 249 (336)
T 4du5_A 173 ARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT---PEGVARFYRQLGAKLV 249 (336)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS---HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC---HHHHHHHHHhcCCCEE
Confidence 8899999999999999999988888888777788889999999999999999999998643 3446788889999999
Q ss_pred EEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 254 IVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 254 vvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|||.|++|++++.+++.+++|+++++ ++|++||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 250 vvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~G~~ 322 (336)
T 4du5_A 250 VVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQVLGDS 322 (336)
T ss_dssp EEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC-----
T ss_pred EEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCc
Confidence 99999999999998899999999997 999999999999999999999999 9999999999999999999998
Q ss_pred CCCCCHHHHHHH
Q 018696 333 PALPTKEAALKL 344 (351)
Q Consensus 333 ~~~~~~~~v~~~ 344 (351)
+++|+.+|++++
T Consensus 323 ~~~p~~~ev~~~ 334 (336)
T 4du5_A 323 EGLPTRAELNAA 334 (336)
T ss_dssp -CCCCHHHHHCC
T ss_pred cCCCCHHHHHhc
Confidence 889999999864
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-52 Score=379.81 Aligned_cols=307 Identities=33% Similarity=0.543 Sum_probs=248.2
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
++++|+++|++++|++...+..|..++..+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 20 ~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~ 99 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITDG 99 (327)
T ss_dssp --CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCccc
Confidence 46789999999999999888877777888899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
+.+.++.+|+.+++..+ +|++.+..+ ++++..++++++..+.+++++++|++++.+..+...+.+.++++.++++++
T Consensus 100 v~~~~~~~t~~~~v~~~-~g~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~ 176 (327)
T 3hj6_A 100 IQQDKERRTTIVYVSKS-TRTPDWLPY--READMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGK 176 (327)
T ss_dssp CEEESSSCCCEEEECCC-TTCCCEEEE--CSGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEec-CCCccEEEe--cChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCC
Confidence 98888889998887665 688887776 356677777777677889999999999765555567888999999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEe
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYT 266 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 266 (351)
++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++..+.++ ++++|.+.|++.|+||+|++|++++.
T Consensus 177 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~---~~~~l~~~g~~~vvvt~G~~G~~~~~ 253 (327)
T 3hj6_A 177 IVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPEN---YVKRYLELGVKAVILTLGEEGVIASD 253 (327)
T ss_dssp EEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSSG---GGGGGTTTTCSEEEEECSTTCEEEEC
T ss_pred EEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHH---HHHHHHhCCCCEEEEEECCCceEEEe
Confidence 999999988777765545567788899999999999999999999754443 45788889999999999999999999
Q ss_pred cCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 267 KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 267 ~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+|++++++
T Consensus 254 ~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 254 GEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp SSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC--------------------
T ss_pred CCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhc
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999874
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=360.72 Aligned_cols=306 Identities=27% Similarity=0.414 Sum_probs=266.0
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+++|++++|++...++ +...+..+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~ 80 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIK 80 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEE
Confidence 4799999999999974333 223455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEE--EecCCCceEEEecCCcccccCCccccchhhhcCccEEEEcccccc-CchhHHHHHHHHHHHHHcC
Q 018696 109 YDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 109 ~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~ 185 (351)
+.++.+|+.+++. ++.+|++.+.+++..+++..++++++....+++++++|++++... .+...+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (313)
T 2v78_A 81 VDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR- 159 (313)
T ss_dssp EETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-
Confidence 8888899999998 887888888877656677778888887777889999999887542 344556777777776654
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCc--EEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQAD--IIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++||+.+..+|.+.+.+.+.+.++++++| ++++|++|++.+++..+ ..+++++|.+.|++.||||+|++|++
T Consensus 160 ---~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G~~ 233 (313)
T 2v78_A 160 ---SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTD---PDEAYRKYKELGVKVLLYKLGSKGAI 233 (313)
T ss_dssp ---EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCC---HHHHHHHHHHTTEEEEEEECGGGCEE
T ss_pred ---CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCC---HHHHHHHHHhCCCCEEEEEECCCCcE
Confidence 89999887778767777778888999999 99999999999998643 34467888889999999999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 234 ~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 306 (313)
T 2v78_A 234 AYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVITVRGDNELTPTLEDAER 306 (313)
T ss_dssp EEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHH
T ss_pred EeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 9988888899999999999999999999999999999999 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++++
T Consensus 307 ~~~~~~ 312 (313)
T 2v78_A 307 FLNEFK 312 (313)
T ss_dssp HHHHCC
T ss_pred HHHhcc
Confidence 998764
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-49 Score=361.57 Aligned_cols=311 Identities=21% Similarity=0.269 Sum_probs=267.6
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+|+|++++|++.... .+..++..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 3 ~~v~viG~~~~D~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~ 81 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPEY-LMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVG 81 (346)
T ss_dssp CEEEEECCCEEEEECSTT-CCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CcEEEeChhhhhhcCCCC-CcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEEE
Confidence 579999999999996432 2333566788999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEe--cCCcccccCCccccc-hhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHc
Q 018696 109 YDSTARTALAFVTLRADGEREFLFF--RHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKES 184 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~ 184 (351)
.. +.+|+.+++..+.++++++..+ +..++...+++++++ ...+++++++|++++.. ..+...+.+.++++.++++
T Consensus 82 ~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~ 160 (346)
T 3ktn_A 82 EK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAY 160 (346)
T ss_dssp EC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred eC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHc
Confidence 75 5689999888776666555554 555666778888876 45789999999998754 3455567889999999999
Q ss_pred CCeEEEcCCCCCCCCCCH--HHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC-CC-----ChhHHHHHHHhcC-CCeEEEE
Q 018696 185 GSILSYDPNLRLPLWPSE--EAAREGIMSIWDQADIIKVSDDEITFLTGGD-DH-----NDDNVVLEKLFHP-NLKLLIV 255 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-~~-----~~~~~~~~~l~~~-g~~~vvv 255 (351)
++++++||+.+..+|... +...+.+.++++++|++++|++|++.+++.. .. ++..+++++|.+. |++.|||
T Consensus 161 g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvv 240 (346)
T 3ktn_A 161 QKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAG 240 (346)
T ss_dssp TCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999888888643 5667888999999999999999999999876 32 2345567778774 9999999
Q ss_pred eeCCcc-------eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 256 TEGSKG-------CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 256 t~G~~G-------~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|+|++| ++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|+.++++
T Consensus 241 T~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~a~aa~~v~~ 313 (346)
T 3ktn_A 241 TTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------LEKAVTFATVNGVLAHTI 313 (346)
T ss_dssp EEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTS
T ss_pred ecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcc
Confidence 999998 888888888999999999999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhhhc
Q 018696 329 RGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 329 ~g~~~~~~~~~~v~~~l~~~~ 349 (351)
.|+.+ +|+.++|++++++.+
T Consensus 314 ~G~~~-~p~~~ev~~~l~~~~ 333 (346)
T 3ktn_A 314 QGDIP-LTTVKQVNHVLEHPN 333 (346)
T ss_dssp SSSCC-CCCHHHHHHHHHCTT
T ss_pred CCCCC-CCCHHHHHHHHhcCC
Confidence 99986 899999999998655
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-49 Score=355.96 Aligned_cols=301 Identities=30% Similarity=0.400 Sum_probs=260.7
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+++|++++|++...++ +......+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~ 80 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEE
Confidence 4799999999999974333 223455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcCCe
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSI 187 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 187 (351)
..++ +|+.+++.++.+|++++.+++..++...++++++....+++++++|++++.. +.+...+.+.++++.+++++++
T Consensus 81 ~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~ 159 (309)
T 1v1a_A 81 RAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR 159 (309)
T ss_dssp ECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred EcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCE
Confidence 8888 9999999888888888877765666677888777777789999999998765 2456678888999999999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEec
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 267 (351)
+++||+.+..+| +.+...+.+.++++++|++++|++|++.+++.. .++++ +.|++.|+||.|++|+++ .+
T Consensus 160 v~~D~~~~~~~~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~-----~~~~~---~~g~~~vvvt~G~~G~~~-~~ 229 (309)
T 1v1a_A 160 VSLDVNYRQTLW-SPEEARGFLERALPGVDLLFLSEEEAELLFGRV-----EEALR---ALSAPEVVLKRGAKGAWA-FV 229 (309)
T ss_dssp EEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----HHHHH---HTCCSEEEEECGGGCEEE-EE
T ss_pred EEEeCCCCcccC-CHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----HHHHH---hcCCCEEEEEecCCCeeE-ec
Confidence 999999887777 455667788889999999999999999999854 22333 679999999999999988 65
Q ss_pred -CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 268 -EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 268 -~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.++++++++
T Consensus 230 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~ 302 (309)
T 1v1a_A 230 DGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK 302 (309)
T ss_dssp TTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTTCC-
T ss_pred CCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHHHHh
Confidence 678899999999999999999999999999999999 999999999999999999999888899999998876
Q ss_pred hh
Q 018696 347 TV 348 (351)
Q Consensus 347 ~~ 348 (351)
+.
T Consensus 303 ~~ 304 (309)
T 1v1a_A 303 AT 304 (309)
T ss_dssp --
T ss_pred hc
Confidence 54
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-50 Score=366.63 Aligned_cols=302 Identities=36% Similarity=0.543 Sum_probs=256.6
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+|+|++++|++... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 25 ~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 97 (339)
T 1tyy_A 25 NKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLR 97 (339)
T ss_dssp CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEE
T ss_pred CCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheE
Confidence 47999999999999863 23456889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
+.++.+|+.+++.++.+|+|.+.+++..+++..++++ ....+++++++|++++.+..+...+.+.++++.+++.++++
T Consensus 98 ~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v 175 (339)
T 1tyy_A 98 LDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYV 175 (339)
T ss_dssp ECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred ecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEE
Confidence 8888899999988888898888776655666666655 23457889999998876556666788889999999999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecC
Q 018696 189 SYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268 (351)
Q Consensus 189 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 268 (351)
++||+.+..+|.+.+.+.+.+.++++++|++++|++|++.+++..+.+ +++++|.+.|++.||||.|++|++++.++
T Consensus 176 ~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~---~~~~~l~~~g~~~VvvT~G~~G~~~~~~~ 252 (339)
T 1tyy_A 176 LFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQ---DARYYLRDLGCDTTIISLGADGALLITAE 252 (339)
T ss_dssp EEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGG---GGSSTTGGGTCSCEEEECGGGCEEEESSS
T ss_pred EEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHH---HHHHHHHHcCCCEEEEEECCCceEEEeCC
Confidence 999998877776555667778889999999999999999999875433 24567778899999999999999999888
Q ss_pred ceeeecCcccccccCCCCchHHHHHHHHHHHhc-----CCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-----QNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 269 ~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g-----~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
+.+++|+++++++|||||||+|+|+|+++|++| .+ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 253 ~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~ 325 (339)
T 1tyy_A 253 GEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAVTAKGAMTALPFPDQLNT 325 (339)
T ss_dssp CEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGGGSSSTTTTCCCHHHHHH
T ss_pred ceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHH
Confidence 888999999999999999999999999999997 66 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++.+
T Consensus 326 ~l~~~~ 331 (339)
T 1tyy_A 326 FLSSHS 331 (339)
T ss_dssp HHC---
T ss_pred HHhcCc
Confidence 998765
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=354.22 Aligned_cols=304 Identities=26% Similarity=0.443 Sum_probs=263.5
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+++|++++|++...++. ..+...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 80 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCE
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEE
Confidence 37999999999999854332 22455678899999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCC--ceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcC
Q 018696 109 YDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 185 (351)
+.++.+|+.+++.++.+|+ +++.+++..++...++++++....+++++++|++++.. +.+...+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (311)
T 2dcn_A 81 IDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR- 159 (311)
T ss_dssp EETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh-
Confidence 8888899999998888888 88877765667777888888777789999999988754 2455567777787777654
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++||+.+..+|. .+...+.+.++++ ++|++++|++|++.+++..+ ..+++++|.+. ++.|+||+|++|++
T Consensus 160 ---~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~-~~~vvvt~G~~G~~ 231 (311)
T 2dcn_A 160 ---SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGESD---PDKAAKAFSDY-AEIIVMKLGPKGAI 231 (311)
T ss_dssp ---EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCC---HHHHHHHHTTT-EEEEEEEEETTEEE
T ss_pred ---CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCC---HHHHHHHHHHh-CCEEEEEECCCCcE
Confidence 899998877775 5566677888999 99999999999999998643 34467888888 99999999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 232 ~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 304 (311)
T 2dcn_A 232 VYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIET 304 (311)
T ss_dssp EEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHH
T ss_pred EEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 9988888899999999999999999999999999999999 999999999999999999999888899999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++++
T Consensus 305 ~~~~~~ 310 (311)
T 2dcn_A 305 FLREMK 310 (311)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 998764
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=357.27 Aligned_cols=307 Identities=24% Similarity=0.342 Sum_probs=256.2
Q ss_pred CCceEEEEccceeecccCCCCCCC-----CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSL-----AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENN 101 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~-----~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~g 101 (351)
++++|+++|++++|++........ .....+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 467899999999999754321110 011356789999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 102 VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 102 id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
|+++++.+.++.+|+.++++++.+|+|++.+++. .+...++.++++...+.+++++|++++........+.+.++++.+
T Consensus 84 V~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 162 (325)
T 3h49_A 84 IDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA 162 (325)
T ss_dssp CBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHH
T ss_pred CceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHHHHHH
Confidence 9999998888889999999999999998876532 334456777777777899999999986433333456788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++++ .+++|++.++.+|... +.+.++++++|++++|++|++.+++..+ ..++++.|.+.|++.|+||.|++|
T Consensus 163 ~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvt~G~~G 234 (325)
T 3h49_A 163 KARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET---LDEIADCFLACGVKTVVIKTGKDG 234 (325)
T ss_dssp HHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS---HHHHHHHHHTTTCSEEEEECTTSC
T ss_pred HhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC---HHHHHHHHHHcCCCEEEEEeCCCC
Confidence 9988 5777877666666443 4466788999999999999999998754 334677888999999999999999
Q ss_pred eEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 262 CRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
++++.+++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 307 (325)
T 3h49_A 235 CFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVGATTGVKNRKL 307 (325)
T ss_dssp EEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSSSCSSSHH
T ss_pred eEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCCCCCCCCHHH
Confidence 99999888899999986 8999999999999999999999999 999999999999999999999989999999
Q ss_pred HHHHHhhhc
Q 018696 341 ALKLLHTVA 349 (351)
Q Consensus 341 v~~~l~~~~ 349 (351)
++++++++.
T Consensus 308 v~~~l~~~~ 316 (325)
T 3h49_A 308 VEQLLEEYE 316 (325)
T ss_dssp HHTC-----
T ss_pred HHHHHHhcc
Confidence 999998765
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=347.99 Aligned_cols=298 Identities=35% Similarity=0.573 Sum_probs=259.9
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
|+|+|+|++++|++...++. ..+...+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++.
T Consensus 2 ~~v~viG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEGD-LKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIV 80 (313)
T ss_dssp CEEEEESCCEEEEEESSSSC-TTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CcEEEECceeeeeecCCCCC-cccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccee
Confidence 57999999999999875542 33566788999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
+.++.+|+.+++.++. |++++..+ ...++..+++++++...+++++++|++++.+..+...+.+.++++.++ .++++
T Consensus 81 ~~~~~~T~~~~~~~~~-g~~~~~~~-~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v 157 (313)
T 3ewm_A 81 KDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLI 157 (313)
T ss_dssp EESSSCCEEEEEECSS-SSCEEEEC-CSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEE
T ss_pred ecCCCCceEEEEEecC-CCcceEee-ccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEE
Confidence 8888899999988765 88888876 233556788888877778899999999987666667788889999888 47999
Q ss_pred EEcCCCCCCCCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEec
Q 018696 189 SYDPNLRLPLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267 (351)
Q Consensus 189 ~~d~~~~~~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 267 (351)
++||+.+..+|. ..+...+.+.++++++|++++|++|++.+++.... ..+...||||+|++|++++.+
T Consensus 158 ~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~-----------~~~~~~vviT~G~~G~~~~~~ 226 (313)
T 3ewm_A 158 AFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE-----------VKGSMLTAITLGPKGCRLIKN 226 (313)
T ss_dssp EEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-----------CCCSSEEEEECGGGEEEEEET
T ss_pred EEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-----------ccCceEEEEEECCCCeEEEEC
Confidence 999998877776 56667788889999999999999999998775322 134566899999999999999
Q ss_pred CceeeecCcccccccCCCCchHHHHHHHHHHH--hcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA--ADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 268 ~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~--~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
++.+++|+++++++|+|||||+|+|+|+++|+ +|++ +++|+++|+++|++++++.|+.+ +|+.+||++++
T Consensus 227 ~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~-~p~~~ev~~~l 298 (313)
T 3ewm_A 227 ETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQKRGAWS-TPRKDELLKYK 298 (313)
T ss_dssp TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTSCSSCC-CCCHHHHTTSH
T ss_pred CeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHH
Confidence 88999999999999999999999999999999 9999 99999999999999999999974 89999999999
Q ss_pred hhhc
Q 018696 346 HTVA 349 (351)
Q Consensus 346 ~~~~ 349 (351)
++.+
T Consensus 299 ~~~~ 302 (313)
T 3ewm_A 299 EARE 302 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-48 Score=349.98 Aligned_cols=292 Identities=25% Similarity=0.345 Sum_probs=257.0
Q ss_pred ceEEEEccceeecccCCCCCCCC-----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA-----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++|+|+|++++|+++.++..|.. ........+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 3 ~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~ 82 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHID 82 (304)
T ss_dssp CEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCB
T ss_pred CcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCc
Confidence 47999999999999988777643 3456789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++.+.++.+|+.+++.++.+|++++..+ ++++..+++++++. +.+++++++++++ ..+.+.+..+++.+
T Consensus 83 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~~a 155 (304)
T 3ry7_A 83 TSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EVPIPAIISAFEIA 155 (304)
T ss_dssp CTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TSCHHHHHHHHHHH
T ss_pred chhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CCCHHHHHHHHHHH
Confidence 999988888899999999998899988776 56666777776653 4688999999875 23567888899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
++++.++++||+.... .+.++++++|++++|++|++.+++....+ +..+++++|.+.|++.|+||.|+
T Consensus 156 ~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 225 (304)
T 3ry7_A 156 KAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGK 225 (304)
T ss_dssp HHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGG
T ss_pred HHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCC
Confidence 9999999999975422 23567889999999999999999976542 34556788889999999999999
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc-CCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD-QNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g-~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++.+++.+++|+++++++|+|||||+|+|+|+++|++| ++ +++|+++|+++|+.++++.|+.+++|++
T Consensus 226 ~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~~~~G~~~~~p~~ 298 (304)
T 3ry7_A 226 QGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTVQKHGAQASIPLL 298 (304)
T ss_dssp GCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTSCCCCTGGGCCCH
T ss_pred CceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhCCCCccccCCCH
Confidence 999999988999999999999999999999999999999999 99 9999999999999999999999889999
Q ss_pred HHHHHH
Q 018696 339 EAALKL 344 (351)
Q Consensus 339 ~~v~~~ 344 (351)
+|++++
T Consensus 299 ~ev~~~ 304 (304)
T 3ry7_A 299 EEVNQV 304 (304)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999863
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=351.70 Aligned_cols=294 Identities=23% Similarity=0.276 Sum_probs=255.7
Q ss_pred CCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
++++|+++|++++|+++.++..|.. .+..+...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 4578999999999999887765543 344677899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 182 (351)
+++++.+.++.+|+.++++++++|++++..++ +++..++++++....+++++++|+++.. .+...++++.++
T Consensus 108 d~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~ 179 (343)
T 2rbc_A 108 DTSGMTVAPGARSALSTIIIDNRGERLIVPFY--DHRLHEKKRACTPEDIALFDAVLVDVRW------PELALDVLTVAR 179 (343)
T ss_dssp ECTTCEEETTCCCEEEEEEECTTSCEEEEEEC--CGGGGSSCCCCCHHHHTTCSEEEECSSS------HHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCCceEEEEECCCCCEEEEEcC--CCcccCChhHhcHhhhCCCCEEEEcCCC------HHHHHHHHHHHH
Confidence 99999888888999999999888999886653 4455566677766678899999998752 256778889999
Q ss_pred HcCCeEEEcCCCCCCCCCCHHHHHHHHHH-hhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCC-eEEEEeeCCc
Q 018696 183 ESGSILSYDPNLRLPLWPSEEAAREGIMS-IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL-KLLIVTEGSK 260 (351)
Q Consensus 183 ~~~~~v~~d~~~~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~ 260 (351)
+.++++++||... .+.+.+ +++++|++++|++|++.+++..+ ..++++.|.+.|+ +.||||.|++
T Consensus 180 ~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~---~~~~~~~l~~~g~~~~VvvT~G~~ 246 (343)
T 2rbc_A 180 ALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLET---VKDMLPVLHARYPQTFIAVTAGPA 246 (343)
T ss_dssp HTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCSS---HHHHHHHHHHHSTTSEEEEECGGG
T ss_pred HCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCCC---HHHHHHHHHHhCCCceEEEEECCc
Confidence 9999999999631 234566 88999999999999999998653 4446778888899 9999999999
Q ss_pred ceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 261 GCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 261 G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
|++++.++ +.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.
T Consensus 247 G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~ 319 (343)
T 2rbc_A 247 GCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAPTR 319 (343)
T ss_dssp CEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSGGGGCCCH
T ss_pred ceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCccCCCCH
Confidence 99998877 78899999999999999999999999999999999 9999999999999999999988778999
Q ss_pred HHHHHHHhhh
Q 018696 339 EAALKLLHTV 348 (351)
Q Consensus 339 ~~v~~~l~~~ 348 (351)
++++++++++
T Consensus 320 ~ev~~~l~~~ 329 (343)
T 2rbc_A 320 EETEEAMRQW 329 (343)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998765
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=352.66 Aligned_cols=300 Identities=20% Similarity=0.319 Sum_probs=259.1
Q ss_pred CCceEEEEccceeecccCCCC-------CCCCCC---------------CCccccCCChHHHHHHHHHHcCCCeEEEeec
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLAEA---------------PAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~~~---------------~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~v 84 (351)
++++|+++|++++|++..++. .++... ......+||++.|+|++|++||.++.++|.+
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 468999999999999998875 222211 1336789999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEcccc
Q 018696 85 GDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSIS 164 (351)
Q Consensus 85 G~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 164 (351)
|+|.+|+.+++.|++.||+++++...++.+|+.++++++++|+|++..+ .++...++++++....+++++++|++++.
T Consensus 104 G~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~ 181 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYL 181 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGG
T ss_pred CCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeee
Confidence 9999999999999999999999988788899999999999999998876 46666788888888889999999999987
Q ss_pred ccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhhcCCCCCChhHHHH
Q 018696 165 LIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVL 242 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 242 (351)
+..+...+.+.++++.+++.+.++++||+... ..+..++.+.++++ ++|++++|++|++.+++..+. .+++
T Consensus 182 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~~---~~a~ 254 (352)
T 4e3a_A 182 WDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDF---EEAL 254 (352)
T ss_dssp GSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSCH---HHHH
T ss_pred cCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCCH---HHHH
Confidence 55666778899999999999999999996310 12345677888898 899999999999999987543 3355
Q ss_pred HHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Q 018696 243 EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 243 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
+.+.+ +++.||||.|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 255 ~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~a 326 (352)
T 4e3a_A 255 NRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLA 326 (352)
T ss_dssp HHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred HHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 55554 7889999999999999999999999999986 899999999999999999999999 99999999999
Q ss_pred HhHHhcccCCCCCCCCHHHHHH
Q 018696 322 GALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 322 Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
|+.++++.|+.+..|..+.+++
T Consensus 327 Aa~~v~~~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 327 AGIVIQQIGPRPMTSLSEAAKQ 348 (352)
T ss_dssp HHHHTTSSSSSCSSCHHHHHHH
T ss_pred HHHHHcCCCCCCCcCHHHHHHH
Confidence 9999999999988877777665
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=344.53 Aligned_cols=296 Identities=26% Similarity=0.364 Sum_probs=256.2
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+++|+++|++++|+++.+++.|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 4 ~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv~ 83 (309)
T 1rkd_A 4 AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID 83 (309)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEE
T ss_pred CCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCCC
Confidence 457999999999999987776543 2346778999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++.+.++.+|+.++++++.+|++++..+ ++++..+++++++. ..++.++++|+++. .+.+.+..+++.+
T Consensus 84 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 156 (309)
T 1rkd_A 84 ITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SPLESVMAAAKIA 156 (309)
T ss_dssp CTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SCHHHHHHHHHHH
T ss_pred ccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHHHH
Confidence 999988888899999999988899988775 55666677776643 45788999998653 2346778889999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
++++.++++||+.... | ..++++++|++++|++|++.+++.... ++..+.+++|.+.|++.||||.|+
T Consensus 157 ~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 226 (309)
T 1rkd_A 157 HQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGS 226 (309)
T ss_dssp HHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGG
T ss_pred HHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 9999999999986532 2 135678999999999999999986543 234456788888999999999999
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
+|++++.+++.+++|+++++++|++||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+
T Consensus 227 ~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ 299 (309)
T 1rkd_A 227 RGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPWRE 299 (309)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCCHH
T ss_pred CcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCCCCccCCCCCHH
Confidence 99999988888899999999999999999999999999999999 99999999999999999999987889999
Q ss_pred HHHHHHhh
Q 018696 340 AALKLLHT 347 (351)
Q Consensus 340 ~v~~~l~~ 347 (351)
++++++++
T Consensus 300 ev~~~~~~ 307 (309)
T 1rkd_A 300 EIDAFLDR 307 (309)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999865
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=343.38 Aligned_cols=280 Identities=23% Similarity=0.271 Sum_probs=246.0
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
+++|+|+|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 19 m~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~ 98 (310)
T 3go6_A 19 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVG 98 (310)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTCB
T ss_pred cCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 568999999999999988776543 3456789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++++... +.+|+.++++++.+|++++..+ ++++..++ ++ ...+++++++++++. .+.+.+.++++.+++
T Consensus 99 ~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~--~~-~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~~ 167 (310)
T 3go6_A 99 LDRTVTV-PGPSGTAIIVVDASAENTVLVA--PGANAHLT--PV-PSAVANCDVLLTQLE-----IPVATALAAARAAQS 167 (310)
T ss_dssp CTTCEEC-SSCCEEEEEEECTTSCEEEEEE--CGGGGGCC--CC-TTTTTTCSEEEECSS-----SCHHHHHHHHHHHHH
T ss_pred cceeEec-CCCCCEEEEEEcCCCCEEEEec--CChhhhHH--HH-HHHhhcCCEEEECCC-----CCHHHHHHHHHHHHH
Confidence 9999654 5699999999998999998877 44555555 44 567889999998752 346788889999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
.+.++++||+.... .++.+.++++++|++++|++|++.+++. ++.||||.|++|++
T Consensus 168 ~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----------------~~~vvvt~G~~Ga~ 223 (310)
T 3go6_A 168 ADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP-----------------PTHFVITLGVRGAR 223 (310)
T ss_dssp TTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----------------CSEEEEECGGGCEE
T ss_pred cCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC-----------------CCEEEEEECCCCEE
Confidence 99999999985432 2456778899999999999999999874 67899999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHh----cCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA----DQNLIKDENRLREALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~----g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
++.+++.+++|+++++++||+||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+.+|+.+
T Consensus 224 ~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 296 (310)
T 3go6_A 224 YVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATLVSGVGDCAPAAA 296 (310)
T ss_dssp EEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTTSSCSTTCCCCHH
T ss_pred EEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHH
Confidence 9999899999999999999999999999999999999 887 99999999999999999999988899999
Q ss_pred HHHHHHhhhc
Q 018696 340 AALKLLHTVA 349 (351)
Q Consensus 340 ~v~~~l~~~~ 349 (351)
|+++++++.+
T Consensus 297 ev~~~l~~~~ 306 (310)
T 3go6_A 297 AIDAALRANR 306 (310)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHhcc
Confidence 9999998653
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=349.47 Aligned_cols=301 Identities=17% Similarity=0.180 Sum_probs=257.0
Q ss_pred CCCceEEEEccceeecccCCCCCCCCC---CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 26 AYDRLVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 26 ~~~~~i~v~G~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
+++++|+|+|++++|++...+..|... ...+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 356789999999999999887766432 11578899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+++++...++.+|+.++++++++|++.+.+. .+.....++++.+. .+.+..++++++++.. + +.+..+++
T Consensus 84 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~l~~- 155 (328)
T 3kzh_A 84 HMDDSMVIEGGSTPTYLAILDENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYTVLDSDN-----P-EIMEYLLK- 155 (328)
T ss_dssp ECTTCEECTTCCCCEEEEEECTTSCEEEEEE-ECGGGGGCCHHHHHHTHHHHHTCSEEEEESSC-----H-HHHHHHHH-
T ss_pred CccceEEeCCCCCeeEEEEEcCCCCEEEEEE-chhhhhhCCHHHHHHHHHhhccCCEEEEeCCc-----H-HHHHHHHH-
Confidence 9999988888899999999999999887543 24555556666554 3567899999987642 2 56666666
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.+.++++||+.. ...+.+.++++++|++++|++|++.+++.... ++..+++++|.+.|++.|+||.|
T Consensus 156 a~~~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 227 (328)
T 3kzh_A 156 NFKDKTNFILDPVSA--------EKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLD 227 (328)
T ss_dssp HHTTTSEEEEECCSH--------HHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred HhhcCCcEEEEeCCH--------HHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 788999999999631 22345667889999999999999999986643 23345678888899999999999
Q ss_pred CcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 259 ~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
++|++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+..|+.
T Consensus 228 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~~~~ 300 (328)
T 3kzh_A 228 ADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMAL 300 (328)
T ss_dssp GGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCTTCSH
T ss_pred CCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCcCCH
Confidence 999999998888999999999999999999999999999999999 9999999999999999999999899999
Q ss_pred HHHHHHHhhhc
Q 018696 339 EAALKLLHTVA 349 (351)
Q Consensus 339 ~~v~~~l~~~~ 349 (351)
++++++++++.
T Consensus 301 ~~v~~~~~~~~ 311 (328)
T 3kzh_A 301 DTVLAKLEKTT 311 (328)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHhhhcc
Confidence 99999998764
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=347.12 Aligned_cols=311 Identities=20% Similarity=0.257 Sum_probs=253.5
Q ss_pred CceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
+.+|+++|++++|+.... +.|..++..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+.+++.|++.||+++++
T Consensus 24 m~kv~~~GE~m~~l~p~~-~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v 102 (351)
T 4gm6_A 24 MKQVVTIGELLMRLSTQQ-GIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTAFV 102 (351)
T ss_dssp -CEEEEECCCEEEEECCT-TCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECTTE
T ss_pred cCCEEEEcceeEEecCCC-CCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccc
Confidence 458999999999988653 3455567788899999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc-hhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcC
Q 018696 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 108 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 185 (351)
...++.+|+.++...+..+.+.+.+++...+.......+++ .+.+++++++|++++.+ ..+...+.+.++++.++++|
T Consensus 103 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g 182 (351)
T 4gm6_A 103 VEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNG 182 (351)
T ss_dssp EECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHHHHHHHcC
Confidence 88888777666665566677777777665555445555544 45789999999998765 45666788999999999999
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh-HHHHHHHh-c----CCCeEEEEeeCC
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD-NVVLEKLF-H----PNLKLLIVTEGS 259 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~-~~~~~~l~-~----~g~~~vvvt~G~ 259 (351)
++++|||++++.+| +.+..++.+.++++++|++++|++|+..+++....... ........ . .+.+.++++.+.
T Consensus 183 ~~v~~D~n~r~~lw-~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 261 (351)
T 4gm6_A 183 IKISFDMNYRAKLW-ELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELFYATKRTVISASH 261 (351)
T ss_dssp CEEEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTE
T ss_pred CCcccCCCcCchhh-hhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhhhccccceeeecc
Confidence 99999999999998 56778888999999999999999999999986643322 21222221 1 233445555544
Q ss_pred --cceEEEecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCC
Q 018696 260 --KGCRYYTKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALP 336 (351)
Q Consensus 260 --~G~~~~~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~ 336 (351)
.+..++.+++.++.+++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~aaaal~v~~~Ga~~~~~ 334 (351)
T 4gm6_A 262 HLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATAAAGLKHSIHGDINPFD 334 (351)
T ss_dssp EEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSCCCC
T ss_pred CCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 4567778888888888875 7999999999999999999999999 99999999999999999999987765
Q ss_pred CHHHHHHHHhhh
Q 018696 337 TKEAALKLLHTV 348 (351)
Q Consensus 337 ~~~~v~~~l~~~ 348 (351)
.++|++|+++-
T Consensus 335 -~~ev~~~l~~~ 345 (351)
T 4gm6_A 335 -EKTIADFAADK 345 (351)
T ss_dssp -HHHHHHHHHC-
T ss_pred -HHHHHHHHhCC
Confidence 68999999754
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=342.69 Aligned_cols=290 Identities=25% Similarity=0.408 Sum_probs=254.4
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHc--CCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRL--GGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l--G~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++++|+|+|++++|++... + ...+...+||++.|+|.+|++| |.++.++|.+|+|.+|+.+++.|++.||++
T Consensus 22 ~m~~i~viG~~~iD~~~~~-~-----~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~ 95 (328)
T 4e69_A 22 SMMHILSIGECMAELAPAD-L-----PGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDG 95 (328)
T ss_dssp SSCEEEEESCCEEEEEECS-S-----TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTTEEC
T ss_pred cCCcEEEecCcEEEEecCC-C-----CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCcc
Confidence 4568999999999999862 1 1457789999999999999999 899999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCccc-ccCCccccchhhhcCccEEEEccccc--cCchhHHHHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSAD-MLLCESELDKNLIKQGSIFHYGSISL--IAEPCRSTQLAAMNLA 181 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~i~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 181 (351)
+++.+.++.+|+.+++.++ +|++++.+++..... ..++..++....+++++++|++++.+ ..+...+.+.++++.+
T Consensus 96 ~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a 174 (328)
T 4e69_A 96 GGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQCGRATLLRALAQA 174 (328)
T ss_dssp TTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCchhhccCchHHHHHHHHHHHH
Confidence 9999888889999999998 899998887554433 23344444456789999999998643 3455678888999999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+.+..+|.+.+...+.+.++++++|++++|++|++.+++.. +..+++++|.+.|++.||||.|++|
T Consensus 175 ~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G 251 (328)
T 4e69_A 175 RATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDA---GPDATADRYARAGVRSVVVKNGPHA 251 (328)
T ss_dssp HHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCS---SHHHHHHHHHTTTCSEEEEBCTTSC
T ss_pred HhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCC---CHHHHHHHHHhcCCCEEEEEeCCCC
Confidence 9999999999998887887777888889999999999999999999999875 3445678899999999999999999
Q ss_pred eEEEecCceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCC
Q 018696 262 CRYYTKEFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIP 333 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~ 333 (351)
++++.+++.+++|+++ ++++|++||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 252 VHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp EEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSC
T ss_pred eEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHccCCCcC
Confidence 9999998899999986 79999999999999999999999999 99999999999999999999864
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=355.57 Aligned_cols=315 Identities=15% Similarity=0.203 Sum_probs=254.4
Q ss_pred CCCCCCCccccccccccCCCCCCCCceEEEEccceeecccCCCC--------------------CCCC----CCCCcccc
Q 018696 4 NHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKA 59 (351)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~G~~~iD~~~~~~~--------------------~~~~----~~~~~~~~ 59 (351)
.|||||+--+.+-+..|. +.+|+++|++++|+++.++. .|.. .+......
T Consensus 6 ~~~~~~~~~~~~~~~~m~------~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~ 79 (370)
T 3vas_A 6 HHHHHSSGLVPRGSHDLS------EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYI 79 (370)
T ss_dssp ---------------CCC------TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEE
T ss_pred cccccccCcccCCccccC------CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEe
Confidence 478888777776444453 56899999999999999884 2221 24567899
Q ss_pred CCChHHHHHHHHHHc---CCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCC
Q 018696 60 PGGAPANVAVGISRL---GGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHP 136 (351)
Q Consensus 60 ~GG~~~n~a~~l~~l---G~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 136 (351)
+||++.|+|++|++| |.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++++++ +|+|++..+ +
T Consensus 80 ~GG~~~N~A~~la~L~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ 156 (370)
T 3vas_A 80 AGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--L 156 (370)
T ss_dssp EECHHHHHHHHHHHHHCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--E
T ss_pred cCCHHHHHHHHHHHhcCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--c
Confidence 999999999999999 9999999999999999999999999999999987767789999999998 889988776 5
Q ss_pred cccccCCccccch----hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh
Q 018696 137 SADMLLCESELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI 212 (351)
Q Consensus 137 ~~~~~~~~~~i~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~ 212 (351)
+++..+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+... .| .+..++.+.++
T Consensus 157 ga~~~l~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~~--~~--~~~~~~~l~~l 230 (370)
T 3vas_A 157 GAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSAP--FL--SQFNTKEVDEM 230 (370)
T ss_dssp EGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHH
T ss_pred chhhhCCHHHcCchhhHHHHhhCCEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCcH--HH--HHHHHHHHHHH
Confidence 6667788877754 56889999999987543 356788899999999999999998521 11 12345678889
Q ss_pred hhcCcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcC-------CCeEEEEeeCCcceEEEe--cCceeeecCccc---
Q 018696 213 WDQADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHP-------NLKLLIVTEGSKGCRYYT--KEFKGRVPGVKT--- 278 (351)
Q Consensus 213 l~~~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~--- 278 (351)
++++|++++|++|++.+++... .++..+++++|.++ |++.||||+|++|++++. +++.+++|++++
T Consensus 231 l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~ 310 (370)
T 3vas_A 231 ISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDD 310 (370)
T ss_dssp HTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTT
T ss_pred HhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCC
Confidence 9999999999999999987532 24556677888764 999999999999999998 778889999987
Q ss_pred ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHH
Q 018696 279 KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342 (351)
Q Consensus 279 ~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~ 342 (351)
+++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+. +|+.++++
T Consensus 311 ~vvDttGAGDaF~ag~l~~l~~g~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 311 QIIDTNGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp TCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CcCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 8999999999999999999999999 9999999999999999999984 47777765
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=343.39 Aligned_cols=281 Identities=22% Similarity=0.289 Sum_probs=247.0
Q ss_pred CceEEEEccceeecccCCCCCCCCC----CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLAE----APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
.|+|+|+|++++|+++.++..|... ...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 2 ~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 81 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCE
T ss_pred CceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 3679999999999999888876542 346789999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
++++. .++.+|+.++++++.+|++++..+ ++++..+++++++ .+.++.++++++++.. +.+.+.++++.+
T Consensus 82 ~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~-----~~~~~~~~~~~a 153 (299)
T 3ikh_A 82 LLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGNF-----SLDKTRALFQYA 153 (299)
T ss_dssp EESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSCS-----CHHHHHHHHHHH
T ss_pred eeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCCC-----CHHHHHHHHHHH
Confidence 99884 567799999999988999988776 5666667777665 3467899999987632 457788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+... +.+.++++++|++++|++|++.+++ .|++.|+||+|++|
T Consensus 154 ~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g----------------~g~~~vvvt~G~~G 207 (299)
T 3ikh_A 154 RSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP----------------YGVKTLVITQGAAG 207 (299)
T ss_dssp HHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC----------------CSCSEEEEECGGGC
T ss_pred HHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc----------------CCCCEEEEEECCCc
Confidence 999999999997542 2456788999999999999999887 67889999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHH-HHHHHHHhcCCcccchHHHHH-HHHHHHHHHhHHhcccCCCCCCCCHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVS-GILNCLAADQNLIKDENRLRE-ALLFANACGALTVTERGAIPALPTKE 339 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~a-g~~~~l~~g~~~~~~~~~~~~-a~~~a~~~Aa~~i~~~g~~~~~~~~~ 339 (351)
++++.+++.+++|+++++++|||||||+|.| +|+++|++|++ +++ |+++|+++|+.++++.|+.+.+|+.+
T Consensus 208 ~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ 280 (299)
T 3ikh_A 208 AWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSRRGTLSAFPGSR 280 (299)
T ss_dssp EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHSSSSTTTSCCHH
T ss_pred eEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCcccccCCCHH
Confidence 9999888899999999999999999999999 99999999999 999 99999999999999999998899999
Q ss_pred HHHHHHhhhc
Q 018696 340 AALKLLHTVA 349 (351)
Q Consensus 340 ~v~~~l~~~~ 349 (351)
++++++++..
T Consensus 281 ev~~~l~~~~ 290 (299)
T 3ikh_A 281 ELAALLTTDG 290 (299)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHHhcc
Confidence 9999998654
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-47 Score=341.58 Aligned_cols=290 Identities=26% Similarity=0.384 Sum_probs=248.1
Q ss_pred ceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++|+++|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 85 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDINI 85 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCBC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCcc
Confidence 37999999999999887766543 34457789999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHc
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 184 (351)
+++...++.+|+.++++++.+|++++..+ .+++..+++++++. ++++++|+++.. .+...++++.++++
T Consensus 86 ~~~~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~---~~~~~v~~~~~~------~~~~~~~~~~a~~~ 154 (302)
T 2c4e_A 86 SKLYYSEEEETPKAWIFTDKDNNQITFFL--WGAAKHYKELNPPN---FNTEIVHIATGD------PEFNLKCAKKAYGN 154 (302)
T ss_dssp TTCEECSSSCCCEEEEEECSSCCEECCEE--CGGGGGGGGCCCCC---CCEEEEEECSSC------HHHHHHHHHHHBTT
T ss_pred cceEeeCCCCCceEEEEECCCCCEEEEEe--CChhhhCCHhhcCc---ccCCEEEEeCCC------cHHHHHHHHHHHhc
Confidence 99888888889999999988898887766 44555566666543 688999987631 27788889999999
Q ss_pred CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
+ ++++||+.+...|. .+.+.++++++|++++|++|++.+++....+.. +|++. ++.|+||.|++|+++
T Consensus 155 g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~~~-~~~vvvt~G~~G~~~ 222 (302)
T 2c4e_A 155 N-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID-----DYLER-VDALIVTKGSKGSVI 222 (302)
T ss_dssp B-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH-----HHHTT-CSEEEEECGGGCEEE
T ss_pred C-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH-----HHHhc-CCEEEEEECCCceEE
Confidence 9 99999985433332 345677889999999999999999875544321 56667 899999999999999
Q ss_pred EecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 265 YTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
+.+++.+++|+++++ ++||+||||+|.|||+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++++
T Consensus 223 ~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~ 295 (302)
T 2c4e_A 223 YTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGCQTNLPTWDKVVE 295 (302)
T ss_dssp ECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHH
T ss_pred EeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccccccCCCHHHHHH
Confidence 988888899999998 999999999999999999999999 999999999999999999999878899999999
Q ss_pred HHhhh
Q 018696 344 LLHTV 348 (351)
Q Consensus 344 ~l~~~ 348 (351)
++++.
T Consensus 296 ~~~~~ 300 (302)
T 2c4e_A 296 RLEKH 300 (302)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98764
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=343.39 Aligned_cols=287 Identities=25% Similarity=0.355 Sum_probs=246.5
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcC----CCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLG----GSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG----~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++|+|+|++++|++... ..+...+||++.|+|++|++|| .+|.++|.+|+|.+|+.+++.|++.||++
T Consensus 5 ~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~ 76 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDT 76 (319)
T ss_dssp EEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEEC
T ss_pred CceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 57999999999998754 2467899999999999999999 99999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCc-ccccCCccccc--hhhhcCccEEEEccccc--cCchhHHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPS-ADMLLCESELD--KNLIKQGSIFHYGSISL--IAEPCRSTQLAAMN 179 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~i~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 179 (351)
+++.+.++.+|+.+++.++.+|+|++.+++... ++..+++++++ .+.+++++++|++++.+ ..+...+.+.++++
T Consensus 77 ~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~ 156 (319)
T 3lhx_A 77 SLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLR 156 (319)
T ss_dssp TTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHH
T ss_pred ceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHH
Confidence 999988888999999998889999988875543 34445555443 35689999999998653 34556688899999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
.+++.+.++++||+.+..+|...+...+.+.++++++|++++|+.|++.+++.. +..+++++|.+.|++.||||.|+
T Consensus 157 ~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~ 233 (319)
T 3lhx_A 157 ECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ---PVEDVIARTHNAGVKEVVVKRGA 233 (319)
T ss_dssp HHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC---CHHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC---CHHHHHHHHHhcCCCEEEEEECC
Confidence 999999999999998888888888888889999999999999999999999874 34456788999999999999999
Q ss_pred cceEEEecCcee-eecCc---ccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCC
Q 018696 260 KGCRYYTKEFKG-RVPGV---KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIP 333 (351)
Q Consensus 260 ~G~~~~~~~~~~-~v~~~---~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~ 333 (351)
+|++++.+++.+ ++|++ +++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+
T Consensus 234 ~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 234 DSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp EEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred CCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCCCcC
Confidence 999999887655 89986 578999999999999999999999999 99999999999999999999864
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=341.33 Aligned_cols=294 Identities=27% Similarity=0.355 Sum_probs=250.8
Q ss_pred CCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
++++|+|+|++++|+++.++..|.. ....+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||
T Consensus 23 ~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv 102 (331)
T 2fv7_A 23 EVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 102 (331)
T ss_dssp -CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTE
T ss_pred ccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCC
Confidence 3468999999999999987776543 234577889999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+++++...++.+|+.++++++.+|++++..+ ++++..++++++.. +.++.++++++++. .+.+.+..+++.
T Consensus 103 ~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~~~ 175 (331)
T 2fv7_A 103 STEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE-----ITPATSLEALTM 175 (331)
T ss_dssp ECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS-----SCHHHHHHHHHH
T ss_pred cceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC-----CCHHHHHHHHHH
Confidence 9999988888899999999988899988776 45555677776643 35778999988653 234677888999
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.+.++++||+.....|. .++++++|++++|++|++.+++.... ++..+++++|.+.|++.|+||.|
T Consensus 176 a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G 246 (331)
T 2fv7_A 176 ARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLG 246 (331)
T ss_dssp HHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECG
T ss_pred HHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999986532222 35678999999999999999986533 23445678888999999999999
Q ss_pred CcceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHHHhc--CCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 259 SKGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--QNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 259 ~~G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g--~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
++|++++.++ +.+++|+++++++|+|||||+|.|+|+++|++| ++ +++|+++|+++|+.++++.|+.+.
T Consensus 247 ~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~~v~~~G~~~~ 319 (331)
T 2fv7_A 247 AEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQSS 319 (331)
T ss_dssp GGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGGGG
T ss_pred CCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHHHhCCCCCccC
Confidence 9999998877 788999999999999999999999999999999 99 999999999999999999998878
Q ss_pred CCCHHHHHH
Q 018696 335 LPTKEAALK 343 (351)
Q Consensus 335 ~~~~~~v~~ 343 (351)
+|+.+++++
T Consensus 320 ~p~~~ev~~ 328 (331)
T 2fv7_A 320 YPYKKDLPL 328 (331)
T ss_dssp CCCGGGSCG
T ss_pred CCCHHHHhh
Confidence 889888754
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=333.68 Aligned_cols=290 Identities=27% Similarity=0.369 Sum_probs=247.6
Q ss_pred ceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCC-eEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGS-SAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~-v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++|+|+|++++|+++.++..|.. ....+...+||++.|+|++|++||.+ +.++|.+|+|.+|+.+++.|++.||
T Consensus 15 ~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV- 93 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI- 93 (311)
T ss_dssp CCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE-
T ss_pred CCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC-
Confidence 47999999999999998887653 24467888999999999999999999 9999999999999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++.+.++.+|+.++++++.+|++++..+ ++++..+++++++.+.+++++++++++.. +.+.+. +.+++
T Consensus 94 --~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~---~~a~~ 161 (311)
T 1vm7_A 94 --TGYIRVSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQNEI-----PFETTL---ECAKR 161 (311)
T ss_dssp --EEEEECSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHHHHH---HHHHH
T ss_pred --EEEEcCCCCCeEEEEEECCCCCEEEEEe--cCccccCCHHHhChhhcccCCEEEEeCCC-----CHHHHH---HHHHH
Confidence 6777677899999999988899988876 45666678777766678899999987532 223333 33788
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
.+.++++||+.... .+.++++++|++++|++|++.+++.. +.++..+.+++|.+.|++.|+||.|++|
T Consensus 162 ~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 231 (311)
T 1vm7_A 162 FNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKG 231 (311)
T ss_dssp CCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGGGC
T ss_pred cCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 89999999986422 23467899999999999999998742 2234455778888899999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+|+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 232 VLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHHHH
T ss_pred eEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCccccCCCHHHH
Confidence 999888888899999999999999999999999999999999 9999999999999999999998788999999
Q ss_pred HHHHhhh
Q 018696 342 LKLLHTV 348 (351)
Q Consensus 342 ~~~l~~~ 348 (351)
+++++++
T Consensus 305 ~~~l~~~ 311 (311)
T 1vm7_A 305 EAFLKNL 311 (311)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998753
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=334.16 Aligned_cols=290 Identities=22% Similarity=0.323 Sum_probs=242.4
Q ss_pred ceEEEEccceeecccCC----------CCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCC-ChHHHHH
Q 018696 29 RLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD-DEFGYML 93 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~-D~~g~~i 93 (351)
|+|+|+|++++|+++.+ +..|.. .+..+...+||++.|+|.+|++||.++.++|.+|+ | +++ +
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i 78 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-Y 78 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-H
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-H
Confidence 36999999999999877 444432 23467789999999999999999999999999999 9 899 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHH
Q 018696 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRST 173 (351)
Q Consensus 94 ~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (351)
++.|++.||+++++.+.++.+|+.++++++.+|++.+.++ +++...+.++++... ++++++|+++. ..+.
T Consensus 79 ~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~~ 148 (326)
T 3b1n_A 79 LDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQG 148 (326)
T ss_dssp HHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHHH
T ss_pred HHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHHH
Confidence 9999999999999988888899999999988888877665 445555555555332 78999998753 2467
Q ss_pred HHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEE
Q 018696 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLL 253 (351)
Q Consensus 174 ~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~v 253 (351)
+.++++.+++.+.++++||+.+...|. .+.+.++++++|++++|++|++.+++....+. +.+.+. ++.|
T Consensus 149 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-----~~l~~~-~~~v 217 (326)
T 3b1n_A 149 MVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSE-----DEIASR-VQAL 217 (326)
T ss_dssp HHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCH-----HHHHTT-SSEE
T ss_pred HHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCH-----HHHHhc-CCEE
Confidence 788899999999999999987655452 24456788999999999999999987533221 233343 8899
Q ss_pred EEeeCCcceEEEecCceeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 254 IVTEGSKGCRYYTKEFKGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 254 vvt~G~~G~~~~~~~~~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|||.|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 218 vvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~ 290 (326)
T 3b1n_A 218 IITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQ 290 (326)
T ss_dssp EEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSTT
T ss_pred EEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999988888899999986 789999999999999999999999 9999999999999999999998
Q ss_pred CCCCCHHHHHHHHhhh
Q 018696 333 PALPTKEAALKLLHTV 348 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~ 348 (351)
+.+|+.+++++++++.
T Consensus 291 ~~~~~~~ev~~~l~~~ 306 (326)
T 3b1n_A 291 TYAPTRAEIDARFETA 306 (326)
T ss_dssp CCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh
Confidence 8889999999998754
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=334.83 Aligned_cols=297 Identities=21% Similarity=0.186 Sum_probs=244.9
Q ss_pred ceEEEEccceeecccCCCCCCCCC---CCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
++|+++|++++|++...+..+... ...+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++
T Consensus 4 ~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~ 83 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDT 83 (317)
T ss_dssp CEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEEC
T ss_pred CeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCCC
Confidence 379999999999998776544322 12367899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCccEEEEccccccCchhHHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 181 (351)
+ ...++.+|+.++++++.+|++++.++. ...+..++++.+.. ..+..++++++++. .+.+.+..+++.+
T Consensus 84 ~-~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 156 (317)
T 2nwh_A 84 P-FTFLDRRTPSYTAILERDGNLVIALAD-MDLYKLFTPRRLKVRAVREAIIASDFLLCDAN-----LPEDTLTALGLIA 156 (317)
T ss_dssp C-EEETTSCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHTSHHHHHHHHHCSEEEEETT-----SCHHHHHHHHHHH
T ss_pred C-cccCCCCCceEEEEEcCCCCEEEEEcc-hHHHhhCCHHHhhhhhhhhHhccCCEEEEeCC-----CCHHHHHHHHHHH
Confidence 8 556677999999999888998876553 23344466655432 45778999988642 2457788899999
Q ss_pred HHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcc
Q 018696 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 182 ~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 261 (351)
++.+.++++||+. . ...+.+.++++++|++++|++|++.+++.. .++..+++++|.+.|++.||||.|++|
T Consensus 157 ~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~-~~~~~~~~~~l~~~g~~~vvvt~G~~G 227 (317)
T 2nwh_A 157 RACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGET-AENVRDWPNILRKAGLSGGVVTRGASE 227 (317)
T ss_dssp HHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC------CTTHHHHHHHTTCCCEEEEETTTE
T ss_pred HhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCC-hhHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 9999999999962 1 112345678899999999999999999862 222333667888899999999999999
Q ss_pred eEEEecC-ceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 262 CRYYTKE-FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 262 ~~~~~~~-~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
++++.++ +.+++|+++++++|+|||||+|.|+|++++++|++ +++|+++|+++|+.++++.|+.+.+|+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 228 VVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp EEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHSSTTCCGGGCCHHH
T ss_pred EEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9998766 46889999999999999999999999999999999 999999999999999999999887899999
Q ss_pred HHHHHhhh
Q 018696 341 ALKLLHTV 348 (351)
Q Consensus 341 v~~~l~~~ 348 (351)
++++++.+
T Consensus 301 v~~~~~~~ 308 (317)
T 2nwh_A 301 VEAMLGLV 308 (317)
T ss_dssp HHHHHTTS
T ss_pred HHhHhhhh
Confidence 99966544
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=335.92 Aligned_cols=293 Identities=22% Similarity=0.243 Sum_probs=246.1
Q ss_pred CceEEEEccceeecccCC----------CCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHH
Q 018696 28 DRLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYML 93 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i 93 (351)
.|+|+|+|++++|+++.+ +..|.. .+..+...+||++.|+|.+|++||.++.++|.+|+| +|+ +
T Consensus 10 ~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i 87 (334)
T 2pkf_A 10 HMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-Y 87 (334)
T ss_dssp SSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-H
T ss_pred CCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-H
Confidence 468999999999999876 444432 234577899999999999999999999999999999 999 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchh--hhcCccEEEEccccccCchhH
Q 018696 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPCR 171 (351)
Q Consensus 94 ~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~--~i~~~~~~~~~~~~~~~~~~~ 171 (351)
++.|++.||+++++.+.++.+|+.++++++.+|++.+.++ +++...++++++... .+++++++|+++. ..
T Consensus 88 ~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~------~~ 159 (334)
T 2pkf_A 88 RDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAIGKPELVIIGAN------DP 159 (334)
T ss_dssp HHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEE--CGGGGGGGGCCHHHHHHHHCSCSEEEEESC------CH
T ss_pred HHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEEC--CchhhhCCHhhcChhhhhhcCCCEEEEcCC------Ch
Confidence 9999999999999988888899999999988888887665 345555666665432 3589999998764 24
Q ss_pred HHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCe
Q 018696 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK 251 (351)
Q Consensus 172 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~ 251 (351)
+.+.++++.+++.+.++++||+.+..+|. .+.+.++++++|++++|++|++.+++....+ . +.+.+. ++
T Consensus 160 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~-~----~~l~~~-~~ 228 (334)
T 2pkf_A 160 EAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWS-E----ADVMAQ-ID 228 (334)
T ss_dssp HHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCC-H----HHHHTT-CS
T ss_pred HHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCC-H----HHHHhc-CC
Confidence 67778889999999999999987665553 2456788999999999999999998754322 1 234444 78
Q ss_pred EEEEeeCCcceEEEecCc-eeeecCcccc-cccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 252 LLIVTEGSKGCRYYTKEF-KGRVPGVKTK-AVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 252 ~vvvt~G~~G~~~~~~~~-~~~v~~~~~~-~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
.|+||.|++|++++.+++ .+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.
T Consensus 229 ~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~ 301 (334)
T 2pkf_A 229 LRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLEST 301 (334)
T ss_dssp CEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSS
T ss_pred EEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCC
Confidence 899999999999988777 8899999987 789999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhhh
Q 018696 330 GAIPALPTKEAALKLLHTV 348 (351)
Q Consensus 330 g~~~~~~~~~~v~~~l~~~ 348 (351)
|+.+.+|+.+++++++++.
T Consensus 302 G~~~~~p~~~ev~~~l~~~ 320 (334)
T 2pkf_A 302 GTQEWQWDYEAAASRLAGA 320 (334)
T ss_dssp SSSCCCCCHHHHHHHHHHH
T ss_pred CCCcCCCCHHHHHHHHHHH
Confidence 9988899999999998754
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=329.72 Aligned_cols=310 Identities=23% Similarity=0.287 Sum_probs=254.2
Q ss_pred CCceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
..|+|+++|+.+.++.... ..+...+..+...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++
T Consensus 11 ~~~~~~~~ge~l~~~~~~~-~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~ 89 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPD-HKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDY 89 (351)
T ss_dssp CCCEEEEESCCEEEEECST-TCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred ccceEEEechhhheecCCC-CccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCccee
Confidence 4679999999999976532 223334567788999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCeEEEEEEecCCCceEEE-ecCCcccccCCccccchh-hhcCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVTLRADGEREFLF-FRHPSADMLLCESELDKN-LIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 107 v~~~~~~~t~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~i~~~-~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~ 183 (351)
+.. .+.+|+.+++..+..+++.+.. .+...+...++++++... .+++++++|++++.. ..+...+.+.++++.+++
T Consensus 90 v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 168 (351)
T 2afb_A 90 IAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANE 168 (351)
T ss_dssp EEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHH
T ss_pred EEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHH
Confidence 886 4668998887765433334333 333334445666666543 468999999988653 344456888899999999
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCC-----------ChhHHHHHHHhcC-CCe
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDH-----------NDDNVVLEKLFHP-NLK 251 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-----------~~~~~~~~~l~~~-g~~ 251 (351)
.+.++++||+.+..+|. .+...+.+.++++++|++++|++|+..+++.... ++..+++++|.+. |++
T Consensus 169 ~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 247 (351)
T 2afb_A 169 KGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFK 247 (351)
T ss_dssp HTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCS
T ss_pred cCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCC
Confidence 99999999998877774 4456677888999999999999999999987642 2234567777774 999
Q ss_pred EEEEeeCCcce--------EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHh
Q 018696 252 LLIVTEGSKGC--------RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGA 323 (351)
Q Consensus 252 ~vvvt~G~~G~--------~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa 323 (351)
.|+||+|++|+ +++.+++.+++|+++++++|+|||||+|+|+|+++|++|++ +++|+++|+++|+
T Consensus 248 ~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~~~aa 320 (351)
T 2afb_A 248 TVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD-------SQKKAEFAAAASC 320 (351)
T ss_dssp EEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999975 67777788899999999999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhh
Q 018696 324 LTVTERGAIPALPTKEAALKLLHT 347 (351)
Q Consensus 324 ~~i~~~g~~~~~~~~~~v~~~l~~ 347 (351)
.++++.|+.+ .|+.+++++++++
T Consensus 321 ~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 321 LKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999874 7999999999865
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=332.20 Aligned_cols=289 Identities=19% Similarity=0.240 Sum_probs=241.8
Q ss_pred CCceEEEEccceeecccCCCC--------------------CCCC----CCCCccccCCChHHHHHHHHHHc----CCC-
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKAPGGAPANVAVGISRL----GGS- 77 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~n~a~~l~~l----G~~- 77 (351)
++.+|+++|++++|++..++. .|.. .+..++..+||++.|+|++|++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 456799999999999998874 2211 24467899999999999999999 999
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhc
Q 018696 78 SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIK 153 (351)
Q Consensus 78 v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~ 153 (351)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++..+ .++...+++++++. +.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999885 56779999999888 888887765 56666677777753 5688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 233 (351)
+++++|++++... .+.+.+.++++.++++++++++|+... .| .+.+++.+.++++++|++++|++|++.+++..
T Consensus 162 ~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~ 235 (347)
T 3otx_A 162 ESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMM 235 (347)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHH
T ss_pred hCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhccc
Confidence 9999999987543 345788899999999999999998521 11 12345778889999999999999999998642
Q ss_pred --CCChhHHHHHHHh------cCCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 --DHNDDNVVLEKLF------HPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 --~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|. +.+++.||||+|++|++++.+++.+++|++++ +++|||||||+|.|||+++|++|+
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~ 315 (347)
T 3otx_A 236 KWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGK 315 (347)
T ss_dssp TCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTC
T ss_pred CCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCC
Confidence 2234455667777 57999999999999999999888888999877 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 316 ~-------l~~a~~~a~~~aa~~v~~~G~~ 338 (347)
T 3otx_A 316 D-------LRRCCETGHYTAQEVIQRDGCS 338 (347)
T ss_dssp C-------HHHHHHHHHHHHHHHHTCC---
T ss_pred C-------HHHHHHHHHHHHHHHHcccCCC
Confidence 9 9999999999999999999964
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=323.16 Aligned_cols=280 Identities=27% Similarity=0.339 Sum_probs=229.9
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+++|++++|++.. ...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.|| +++.
T Consensus 4 ~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~ 69 (296)
T 2qhp_A 4 NIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQI 69 (296)
T ss_dssp CEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEE
T ss_pred ceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEe
Confidence 4799999999999832 3689999999999999999999999999999999999999999999 7787
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH-cCCe
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE-SGSI 187 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~~ 187 (351)
+.++.+|+.+++.++.+|++++.++.. .....+.+.+...+.+++++++|++++....+...+.+.++++.+++ ++.+
T Consensus 70 ~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~ 148 (296)
T 2qhp_A 70 ERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQL 148 (296)
T ss_dssp EEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCE
T ss_pred ecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCE
Confidence 777789999988888788888776532 22233433333345678999999988655555567788888888887 6899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhc-CCCeEEEEeeCCcceEE
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFH-PNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~ 264 (351)
+++||+.+...|. .+.+.++++++|++++|++|++.+++.. +.++..++++++.+ .|++.||||.|++|+++
T Consensus 149 v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~ 223 (296)
T 2qhp_A 149 KIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYV 223 (296)
T ss_dssp EEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEE
T ss_pred EEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEE
Confidence 9999988766663 2456778899999999999999998743 22344556777877 49999999999999999
Q ss_pred EecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCC
Q 018696 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~ 335 (351)
+.+++.+++|+++++++|||||||+|.|+|++++++|++ +++|+++|+++|+.++++.|+.+.+
T Consensus 224 ~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 224 FTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp EETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTSSSSSCCC
T ss_pred EECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 988888999999999999999999999999999999999 9999999999999999999987654
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=322.32 Aligned_cols=290 Identities=22% Similarity=0.216 Sum_probs=242.6
Q ss_pred ceEEEEccceeec-ccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDF-VPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~-~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
|-++|.+++++|+ ++.++..... ....+...+||++.|+|.+|++||.+|.++|.+|+| +|+.+++.|++.||++
T Consensus 3 mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 81 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINH 81 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCCB
T ss_pred eEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCce
Confidence 5789999999999 9888876332 355678999999999999999999999999999999 9999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCC--ceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
+++...++ +|+.++++++ +|+ +++... ++. .+++++++. +.+++++++|++++.. .....+.+.+
T Consensus 82 ~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~ 154 (320)
T 3ie7_A 82 DFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPP-PHYTLSDFKE 154 (320)
T ss_dssp CCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCC-TTCCHHHHHH
T ss_pred EEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCC-CCCCHHHHHH
Confidence 99855555 8999998888 777 776543 332 355555532 4678999999987532 3345678889
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIV 255 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvv 255 (351)
+++.+++.+.++++||+. +.+.+.+. ++|++++|++|++.+++........ .++++.+. ++.|+|
T Consensus 155 ~~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~-~~~~~~~~-~~~vvv 220 (320)
T 3ie7_A 155 LLRTVKATGAFLGCDNSG------------EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEE-NIRTLAEK-IPYLVV 220 (320)
T ss_dssp HHHHHHHHTCEEEEECCH------------HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHH-HHHHHTTT-CSEEEE
T ss_pred HHHHHHhcCCEEEEECCh------------HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHH-HHHHHHhh-CCEEEE
Confidence 999999999999999952 23444444 9999999999999999977542222 23445545 889999
Q ss_pred eeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCC
Q 018696 256 TEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335 (351)
Q Consensus 256 t~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~ 335 (351)
|.|++|++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+ ..
T Consensus 221 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~ 291 (320)
T 3ie7_A 221 SLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SS 291 (320)
T ss_dssp ECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS--SC
T ss_pred EcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCcCC--CC
Confidence 999999999999999999999999999999999999999999999999 999999999999999999994 67
Q ss_pred CCHHHHHHHHhhhc
Q 018696 336 PTKEAALKLLHTVA 349 (351)
Q Consensus 336 ~~~~~v~~~l~~~~ 349 (351)
|+.+++++++++++
T Consensus 292 ~~~~ev~~~~~~~~ 305 (320)
T 3ie7_A 292 FDLEAAGKLKNQVS 305 (320)
T ss_dssp CCHHHHHHHGGGCE
T ss_pred CCHHHHHHHhhCeE
Confidence 99999999999875
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=339.22 Aligned_cols=289 Identities=18% Similarity=0.224 Sum_probs=239.8
Q ss_pred CCceEEEEccceeecccCCCCC-------CCC-----------------CCCCccccCCChHHHHHHHHHHc---CCCeE
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGV-------SLA-----------------EAPAFKKAPGGAPANVAVGISRL---GGSSA 79 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v~ 79 (351)
++.+|+++|++++|++..++.. .+. ........+||++.|+|+++++| |.++.
T Consensus 22 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~ 101 (365)
T 3loo_A 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAI 101 (365)
T ss_dssp CTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEE
T ss_pred CCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEE
Confidence 4568999999999999988762 110 11246789999999999999987 99999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCc
Q 018696 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQG 155 (351)
Q Consensus 80 ~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~ 155 (351)
++|.+|+|.+|+.+++.|++.||+++++.. ++.+|++++++++ +++|++..+ ++++..+++++++. ..++++
T Consensus 102 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T 3loo_A 102 FFGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGA 177 (365)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHC
T ss_pred EEEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhC
Confidence 999999999999999999999999998877 6779999999988 788877765 56667788887753 568899
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--
Q 018696 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD-- 233 (351)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-- 233 (351)
+++|++++.+. ...+.+.++++.+++.|+++++|+... .| .+..++.+.++++++|++++|++|++.+++..
T Consensus 178 ~~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~ 251 (365)
T 3loo_A 178 QFFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNY 251 (365)
T ss_dssp SEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTC
T ss_pred CEEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCC
Confidence 99999987542 345788899999999999999998532 11 23446778889999999999999999998753
Q ss_pred CCChhHHHHHHHhcC------CCeEEEEeeCCcceEEE--ecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 DHNDDNVVLEKLFHP------NLKLLIVTEGSKGCRYY--TKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 ~~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|.+. +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|.|||+++|++|+
T Consensus 252 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~ 331 (365)
T 3loo_A 252 GTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSR 331 (365)
T ss_dssp CCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCC
Confidence 234455577788774 89999999999999999 7778889999987 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 332 ~-------l~~a~~~a~~~Aa~~v~~~G~~ 354 (365)
T 3loo_A 332 T-------VDVCIKCGIWAAREIIQRSGCT 354 (365)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHGGGG
T ss_pred C-------HHHHHHHHHHHHHHHHcCCCCC
Confidence 9 9999999999999999999985
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=320.37 Aligned_cols=292 Identities=22% Similarity=0.246 Sum_probs=241.3
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.+++.+|+++.++..... .+..+...+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceE
Confidence 44666678999999998887332 356788999999999999999999999999999999 99999999999999999
Q ss_pred CeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccch-----hhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDK-----NLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++...+. |++++.+++ .+|++.+..+ ++++ +++++++. ..+...+++|+++.. ......+.+.++++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 154 (309)
T 3umo_A 82 TVEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESGAILVISGSL-PPGVKLEKLTQLIS 154 (309)
T ss_dssp EEECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHTTSCTTCEEEEESCC-CTTCCHHHHHHHHH
T ss_pred EEEecCC--CeeEEEEEECCCCcEEEEEc--CCCC--CCHHHHHHHHHHHHhcCCCCEEEEEccC-CCCCCHHHHHHHHH
Confidence 8876654 444444344 4787776654 3333 55555431 113577899998753 23345678889999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhc--CcEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCCC-eEEE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ--ADIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPNL-KLLI 254 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g~-~~vv 254 (351)
.+++++.++++||. .+.+.+++++ +|++++|++|++.+++... .++..+.+++|.+.|. +.|+
T Consensus 155 ~a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3umo_A 155 AAQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp HHHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred HHHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 99999999999995 1345667776 5999999999999998753 3455567888999887 7999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 223 vt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~-- 293 (309)
T 3umo_A 223 VSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR-- 293 (309)
T ss_dssp EECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSTTC--
T ss_pred EEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCC--
Confidence 9999999999998889999999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCHHHHHHHHhhhc
Q 018696 335 LPTKEAALKLLHTVA 349 (351)
Q Consensus 335 ~~~~~~v~~~l~~~~ 349 (351)
.|+.+|++++++++.
T Consensus 294 ~~~~~ev~~~l~~~~ 308 (309)
T 3umo_A 294 LCSHDDTQKIYAYLS 308 (309)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhc
Confidence 699999999999875
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=323.69 Aligned_cols=292 Identities=15% Similarity=0.176 Sum_probs=239.7
Q ss_pred CceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
+|.++|+|++++|+++.++..... ....+...+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||++
T Consensus 20 ~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~ 98 (330)
T 2jg1_A 20 HMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKH 98 (330)
T ss_dssp CCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEE
T ss_pred cEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCce
Confidence 367889999999999988765322 24467889999999999999999999999999996 69999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAM 178 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (351)
+++...++ |++++.+++.+ ++.. ++ .+++. +++++++. ..+++++++|+++.... ....+.+.+++
T Consensus 99 ~~v~~~~~--t~~~~~~v~~~-~~~~-~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~ 170 (330)
T 2jg1_A 99 AFYNIKGE--TRNCIAILHEG-QQTE-IL-EQGPE--IDNQEAAGFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQII 170 (330)
T ss_dssp CCEEESSC--CEEEEEEEETT-EEEE-EE-ECCCB--CCHHHHHHHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHHH
T ss_pred eEEEccCC--CeeEEEEEeCC-CcEE-EE-CCCCC--CCHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHHH
Confidence 99876643 67777777665 5543 33 23332 55554431 23688999998775432 23456788899
Q ss_pred HHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh---cCcEEEeCHHHHhhhcCCCCC---ChhHHHHHHHhcCCCeE
Q 018696 179 NLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVSDDEITFLTGGDDH---NDDNVVLEKLFHPNLKL 252 (351)
Q Consensus 179 ~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~~l~~~g~~~ 252 (351)
+.++++++++++||+. ..+.++++ ++|++++|++|++.+++.... ++..+++++|++.|++.
T Consensus 171 ~~a~~~g~~v~~D~~~------------~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~ 238 (330)
T 2jg1_A 171 ERCQNKGVPVILDCSG------------ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW 238 (330)
T ss_dssp HHHHTTTCCEEEECCH------------HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSE
T ss_pred HHHHHCCCEEEEECCc------------HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9999999999999951 23455665 899999999999999987532 34455678888999999
Q ss_pred EEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 253 LIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 253 vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 239 VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~G~~ 311 (330)
T 2jg1_A 239 IIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKANTLGMLNAQEAQTG 311 (330)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSS
T ss_pred EEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC
Confidence 999999999999988888899999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
.|+.+++++++++++
T Consensus 312 --~~~~~ev~~~~~~i~ 326 (330)
T 2jg1_A 312 --YVNLNNYDDLFNQIE 326 (330)
T ss_dssp --CCCGGGHHHHHTTCE
T ss_pred --CCCHHHHHHHHhceE
Confidence 689999999998765
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=318.62 Aligned_cols=291 Identities=21% Similarity=0.223 Sum_probs=237.9
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|.++|+|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 3 m~i~v~g~~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~ 81 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIPQA 81 (323)
T ss_dssp CEEEEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCCBC
T ss_pred eEEEEecCceeEEEEecCCcccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCcee
Confidence 67999999999999988873221 23467889999999999999999999999999997 599999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++...+. |++++.+++.+ ++.. +. .+++ .+++++++. +.++.++++|+++.... ....+.+.++++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~-~~~~-~~-~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~ 153 (323)
T 2f02_A 82 FTSIKEE--TRDSIAILHEG-NQTE-IL-EAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAK-GLPSDFYQELVQ 153 (323)
T ss_dssp CEEESSC--CEEEEEEEETT-EEEE-EE-ECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCB-TSCTTHHHHHHH
T ss_pred EEEcCCC--CeeEEEEEcCC-CeEE-EE-CCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCC-CCChHHHHHHHH
Confidence 9877543 66667777655 4443 32 2333 255554431 24688999998765432 223467788899
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh---hcCcEEEeCHHHHhhhcCCCCC----ChhHHHHHHHhcCCCeE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW---DQADIIKVSDDEITFLTGGDDH----NDDNVVLEKLFHPNLKL 252 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l---~~~dvl~~N~~E~~~l~~~~~~----~~~~~~~~~l~~~g~~~ 252 (351)
.+++.+.++++||+. + .+.+++ +++|++++|++|++.+++.... ++..+.+++|.+.|++.
T Consensus 154 ~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~~ 221 (323)
T 2f02_A 154 KAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEW 221 (323)
T ss_dssp HHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSE
T ss_pred HHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 999999999999962 1 234445 5899999999999999987632 34445677888899999
Q ss_pred EEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 253 LIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 253 vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|+||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~- 293 (323)
T 2f02_A 222 IVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT- 293 (323)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSS-
T ss_pred EEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCc-
Confidence 999999999999988888899999999999999999999999999999999 999999999999999999997
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
.+|+.++++++++++.
T Consensus 294 -~~~~~~ev~~~~~~~~ 309 (323)
T 2f02_A 294 -GHVDVENVKKHLMNIQ 309 (323)
T ss_dssp -SCCCHHHHHHHHTTCE
T ss_pred -CCCCHHHHHHHhhcEE
Confidence 4689999999998764
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=321.65 Aligned_cols=278 Identities=14% Similarity=0.245 Sum_probs=231.0
Q ss_pred CCceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
++++|+++|++++|++..++..|.. .+......+||++.|+|++|++||.++.++|.+|+| +|+.+++.|++.||+
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~ 97 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGIN 97 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCC
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCC
Confidence 4678999999999999987776622 234567899999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++++...++.+|+.++++++. |++++..+ .+++..++ +++. ++++++|+++.. ...++++.+++
T Consensus 98 ~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~--~ga~~~~~-~~l~----~~~~~v~~~~~~--------~~~~~~~~a~~ 161 (306)
T 3bf5_A 98 TGHVEKFEDESGPICYIATDG-KKQVSFMH--QGAMAAWA-PQLA----DEYEYVHFSTGP--------NYLDMAKSIRS 161 (306)
T ss_dssp CTTEEEETTCCCSEEEEEECS-SCEEEEEE--CTHHHHCC-CCCC----SCEEEEEECSSS--------SHHHHHHHCCS
T ss_pred chheEecCCCCCceEEEEEcC-CeeEEEEe--CChhhhhh-Hhhc----CCCCEEEECChH--------HHHHHHHHhCC
Confidence 999877777789999999887 88887766 34444455 4442 688999998753 34456666654
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceE
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCR 263 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 263 (351)
++++||+.+...| ..+.+.++++++|++++|++|++.+++....+.. ++. ||||+|++|++
T Consensus 162 ---~v~~D~~~~~~~~-----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-----~l~------vvvT~G~~Ga~ 222 (306)
T 3bf5_A 162 ---KIIFDPSQEIHKY-----SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-----KVT------TIVTNGERGSS 222 (306)
T ss_dssp ---EEEECCGGGGGGS-----CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-----SSC------EEEEEGGGEEE
T ss_pred ---cEEEcCchhhhhc-----cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-----cEE------EEEeecccCeE
Confidence 8999998432111 1345677889999999999999999875443321 111 99999999999
Q ss_pred EEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc--cCCCCCCCCHHHH
Q 018696 264 YYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE--RGAIPALPTKEAA 341 (351)
Q Consensus 264 ~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~--~g~~~~~~~~~~v 341 (351)
++.+++.+++|+++++ +|||||||+|.|||+++|++|++ +++|+++|+++|+.++++ .|+.+.+|+.+++
T Consensus 223 ~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev 294 (306)
T 3bf5_A 223 LFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIENFSLNMEDLERE 294 (306)
T ss_dssp EEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHH
T ss_pred EEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCccccccCCCHHHH
Confidence 9988888899999999 99999999999999999999999 999999999999999999 9998788999999
Q ss_pred HHHHhhh
Q 018696 342 LKLLHTV 348 (351)
Q Consensus 342 ~~~l~~~ 348 (351)
++++++.
T Consensus 295 ~~~~~~~ 301 (306)
T 3bf5_A 295 TENYRRM 301 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998754
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=314.26 Aligned_cols=289 Identities=21% Similarity=0.231 Sum_probs=230.5
Q ss_pred EE-EEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 018696 31 VV-CFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (351)
Q Consensus 31 i~-v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~ 106 (351)
|+ |.|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||++++
T Consensus 4 I~~v~g~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~ 82 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVAT 82 (309)
T ss_dssp EEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEE
T ss_pred EEEEeccchheEEEEcCCCcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCcee
Confidence 55 6679999999988763222 244678899999999999999999999999999998 999999999999999998
Q ss_pred eeecCCCCCeEEEEE-EecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 107 VRYDSTARTALAFVT-LRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 107 v~~~~~~~t~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
+...++ |++++.+ ++.+|++..... +++. +++++++ .+.+++ +++|+++... .....+.+.++++
T Consensus 83 v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~-~~~~~~~~~~~~~ 154 (309)
T 3cqd_A 83 VEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AILVISGSLP-PGVKLEKLTQLIS 154 (309)
T ss_dssp EECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCCC-TTCCHHHHHHHHH
T ss_pred EEcCCC--CeeEEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCCC-CCCCHHHHHHHHH
Confidence 876654 4445555 677787654432 3332 5554442 123677 9999987533 2334678888999
Q ss_pred HHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh-hhcC-cEEEeCHHHHhhhcCCCC--CChhHHHHHHHhcCC-CeEEE
Q 018696 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-WDQA-DIIKVSDDEITFLTGGDD--HNDDNVVLEKLFHPN-LKLLI 254 (351)
Q Consensus 180 ~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l~~~-dvl~~N~~E~~~l~~~~~--~~~~~~~~~~l~~~g-~~~vv 254 (351)
.+++.+.++++||+. . .+.+. .+++ |++++|++|++.+++... .++..+.+++|.+.| ++.|+
T Consensus 155 ~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3cqd_A 155 AAQKQGIRCIVDSSG--------E----ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp HHHTTTCEEEEECCH--------H----HHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred HHHHcCCeEEEECCh--------H----HHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEE
Confidence 999999999999952 1 12333 3788 999999999999998653 234455778888899 99999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||.|++|++++.+++.+++|+++++++|+|||||+|.|+|+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 223 vt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~~~~~G~~-- 293 (309)
T 3cqd_A 223 VSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR-- 293 (309)
T ss_dssp EECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTC-------
T ss_pred EEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCC--
Confidence 9999999999988888899999999999999999999999999999999 9999999999999999999974
Q ss_pred CCCHHHHHHHHhhhc
Q 018696 335 LPTKEAALKLLHTVA 349 (351)
Q Consensus 335 ~~~~~~v~~~l~~~~ 349 (351)
.|+.++++++++++.
T Consensus 294 ~~~~~~v~~~~~~~~ 308 (309)
T 3cqd_A 294 LCSHDDTQKIYAYLS 308 (309)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhh
Confidence 589999999998764
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=321.44 Aligned_cols=294 Identities=17% Similarity=0.174 Sum_probs=239.7
Q ss_pred CCceEEEEccceeecccCCCCCCCC---CC---CCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHC
Q 018696 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EA---PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN 100 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~~~~~---~~---~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~ 100 (351)
..|.++|+|++++|+++.++..... .. ..+...+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~ 89 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKI 89 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHH
T ss_pred cceEEEEecchHHeEEEEcCCccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHc
Confidence 3578999999999999988873221 23 6788899999999999999999999999999998 999999999999
Q ss_pred C--CCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch------hhhcCccEEEEccccccCchhHH
Q 018696 101 N--VDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRS 172 (351)
Q Consensus 101 g--id~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~------~~i~~~~~~~~~~~~~~~~~~~~ 172 (351)
| |+++++...+ .|++++++++.+|++.+.+. .+++. +++++++. ..+.+++++|+++.... ....+
T Consensus 90 g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~-~~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~ 163 (331)
T 2ajr_A 90 SKLITTNFVYVEG--ETRENIEIIDEKNKTITAIN-FPGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGSIPP-GVNEG 163 (331)
T ss_dssp CTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEE-CCCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESCCCT-TSCTT
T ss_pred CCccceEEEEcCC--CCeEEEEEEeCCCceEEEEe-CCCCC--CCHHHHHHHHHHHHHhcccCCEEEEECCCCC-CCCHH
Confidence 9 9999887654 37777777777788734443 23332 55555432 34688999999865322 22346
Q ss_pred HHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh---cCcEEEeCHHH-HhhhcCCCCC--ChhHHHHHHHh
Q 018696 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVSDDE-ITFLTGGDDH--NDDNVVLEKLF 246 (351)
Q Consensus 173 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E-~~~l~~~~~~--~~~~~~~~~l~ 246 (351)
.+.++++.+++.++++++||+. +.+.++++ ++|++++|++| ++.+++.... ++..+++++|+
T Consensus 164 ~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~ 231 (331)
T 2ajr_A 164 ICNELVRLARERGVFVFVEQTP------------RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLA 231 (331)
T ss_dssp HHHHHHHHHHHTTCEEEEECCH------------HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCh------------HHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHH
Confidence 7788899999999999999962 12444555 39999999999 9999886543 23345677787
Q ss_pred cCCCeEEEEeeCCcceEEEecCceeeec-CcccccccCCCCchHHHHHHHHHHH-hcCCcccchHHHHHHHHHHHHHHhH
Q 018696 247 HPNLKLLIVTEGSKGCRYYTKEFKGRVP-GVKTKAVDTTGAGDSFVSGILNCLA-ADQNLIKDENRLREALLFANACGAL 324 (351)
Q Consensus 247 ~~g~~~vvvt~G~~G~~~~~~~~~~~v~-~~~~~~vd~tGaGD~f~ag~~~~l~-~g~~~~~~~~~~~~a~~~a~~~Aa~ 324 (351)
+. ++.|+||+|++|++++.+++.+++| +++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|++
T Consensus 232 ~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al~~A~a~aa~ 303 (331)
T 2ajr_A 232 EK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASALA 303 (331)
T ss_dssp HH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHHH
T ss_pred Hh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 77 8999999999999999888888899 9999999999999999999999999 9999 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHhhhc
Q 018696 325 TVTERGAIPALPTKEAALKLLHTVA 349 (351)
Q Consensus 325 ~i~~~g~~~~~~~~~~v~~~l~~~~ 349 (351)
++++.|+ .+|+.+++++++++++
T Consensus 304 ~v~~~G~--~~~~~~ev~~~~~~~~ 326 (331)
T 2ajr_A 304 ATRRKEK--YMPDLEAIKKEYDHFT 326 (331)
T ss_dssp HTTSSSC--CCCCHHHHHTTGGGEE
T ss_pred HHcCcCc--CCCCHHHHHHHHhhcE
Confidence 9999997 4689999999998764
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=324.01 Aligned_cols=288 Identities=19% Similarity=0.270 Sum_probs=230.5
Q ss_pred CCceEEEEccceeecccC--CCCC----CC--CCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHH
Q 018696 27 YDRLVVCFGEMLIDFVPT--VGGV----SL--AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILK 98 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~--~~~~----~~--~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~ 98 (351)
++++|+|+|++++|++.. +++. |. .....+...+||+ .|+|++|++||.+|.++|.+|+|.+|+.+++.|+
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L~ 130 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELLG 130 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHT
T ss_pred CCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHHH
Confidence 467899999999999875 2222 22 1345678899998 8999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHH
Q 018696 99 ENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLA 176 (351)
Q Consensus 99 ~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
+.||++ .+...++.+|+.++++++.++++....+ ....+.....+.++ .+.+++++++|++++... ..+.+.+
T Consensus 131 ~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~---~~~~~~~ 205 (352)
T 4e84_A 131 SSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDF-EAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKG---GLTHVTT 205 (352)
T ss_dssp TTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEE-CCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSS---SCSSHHH
T ss_pred HcCCce-eeEECCCCCCceEEEEEcCCceEEEEEc-CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCC---CHHHHHH
Confidence 999999 4556677899999988876555433322 12222112222111 356889999999975421 1223677
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC-CChhHHHHHHHhc-CCCeEEE
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD-HNDDNVVLEKLFH-PNLKLLI 254 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~~l~~-~g~~~vv 254 (351)
+++.++++|+++++||+.. .| ++++++|++++|++|++.+++... .++..+.+++|++ .|++.||
T Consensus 206 ~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~~~~~~a~~l~~~~g~~~Vv 272 (352)
T 4e84_A 206 MIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAELDIDALL 272 (352)
T ss_dssp HHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEE
Confidence 8889999999999999753 22 357899999999999999999322 2333455677775 7999999
Q ss_pred EeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC
Q 018696 255 VTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA 334 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~ 334 (351)
||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+
T Consensus 273 vT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~~~Ga~~- 344 (352)
T 4e84_A 273 LTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVGKLGTAT- 344 (352)
T ss_dssp EECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSCC-
T ss_pred EEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCcc-
Confidence 9999999999999899999999999999999999999999999999999 99999999999999999999865
Q ss_pred CCCHHHHH
Q 018696 335 LPTKEAAL 342 (351)
Q Consensus 335 ~~~~~~v~ 342 (351)
++++||+
T Consensus 345 -~t~~el~ 351 (352)
T 4e84_A 345 -VDYDELF 351 (352)
T ss_dssp -CCHHHHT
T ss_pred -CCHHHhc
Confidence 6888875
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=325.10 Aligned_cols=301 Identities=16% Similarity=0.217 Sum_probs=240.1
Q ss_pred CceEEEEccceeecccCCCCC-------CCC-----------------CCCCccccCCChHHHHHHHHHHcCCC---eEE
Q 018696 28 DRLVVCFGEMLIDFVPTVGGV-------SLA-----------------EAPAFKKAPGGAPANVAVGISRLGGS---SAF 80 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~n~a~~l~~lG~~---v~~ 80 (351)
+..|+.||++++|++..++.. ++. .....+..+||++.|+|+++++||.+ |.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 456999999999999887632 110 12345668999999999999999965 999
Q ss_pred EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch----hhhcCcc
Q 018696 81 VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGS 156 (351)
Q Consensus 81 v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~----~~i~~~~ 156 (351)
+|.||+|.+|+++++.|++.||+++++...++.+|+.++++++ +++|++..+ .+++..+++++++. ..++.++
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~ 182 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQ 182 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCS
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhccc
Confidence 9999999999999999999999999988888888998888775 788988877 56666688777753 5678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC--
Q 018696 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD-- 234 (351)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-- 234 (351)
++|++++.+ +...+...++++.+++.+.++++|++... ..+..++.+.++++++|++++|++|++.+++...
T Consensus 183 ~~~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~----~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~ 256 (372)
T 3uq6_A 183 VYYIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPF----LSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLL 256 (372)
T ss_dssp EEEEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEecccc--cccHHHHHHHHHHHHHcCCeEeeccccch----hhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCc
Confidence 999998743 34567888999999999999999986321 1233467788899999999999999999987543
Q ss_pred CChhHHHHHHHhc-------CCCeEEEEeeCCcceEEEecCc--e--eeecCcc-cccccCCCCchHHHHHHHHHHHhcC
Q 018696 235 HNDDNVVLEKLFH-------PNLKLLIVTEGSKGCRYYTKEF--K--GRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 235 ~~~~~~~~~~l~~-------~g~~~vvvt~G~~G~~~~~~~~--~--~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
.+...+.++.+.+ .+++.+|||+|++|++++.+++ . +.+++.+ .++||||||||+|+|||+++|++|+
T Consensus 257 ~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~ 336 (372)
T 3uq6_A 257 EDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGK 336 (372)
T ss_dssp SSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCC
Confidence 2334445555543 4678899999999999987653 2 3344444 4799999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+ +++|+++|+++|+.+|++.|+ .+|++++++-.|+
T Consensus 337 ~-------l~~a~~~a~~aAa~vv~~~Ga--~lp~r~~~~lkln 371 (372)
T 3uq6_A 337 P-------MITSLHAAVKAAAYIICRSGF--SLGSRDSYSLKIN 371 (372)
T ss_dssp C-------HHHHHHHHHHHHHHHHTSSSS--CCCCGGGCC----
T ss_pred C-------HHHHHHHHHHHHHHHHcCCCC--CCCChhHHHHHhc
Confidence 9 999999999999999999997 4678888766554
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=322.07 Aligned_cols=289 Identities=19% Similarity=0.264 Sum_probs=239.5
Q ss_pred CCceEEEEccceeecccCCCC-------CCCC-----------------CCCCccccCCChHHHHHHHHHHcC----CCe
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLA-----------------EAPAFKKAPGGAPANVAVGISRLG----GSS 78 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~n~a~~l~~lG----~~v 78 (351)
++++|+|+|++++|+++..+. .... ........+||++.|+|++|++|| .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 456899999999999998775 1111 124677889999999999999996 999
Q ss_pred EEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCcc-ccc----hhhhc
Q 018696 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES-ELD----KNLIK 153 (351)
Q Consensus 79 ~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~i~----~~~i~ 153 (351)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|++++..+ .+++..++++ +++ .+.++
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~ 160 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVE 160 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHH
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHh
Confidence 999999999999999999999999999886 45678999998887 677776544 5556667776 664 34577
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD 233 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 233 (351)
+++++|++++... .+.+.+..+++.+++.++++++||... +| .+...+.+.++++++|++++|++|++.+++..
T Consensus 161 ~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 234 (345)
T 1bx4_A 161 KARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSAP--FI--SQFYKESLMKVMPYVDILFGNETEAATFAREQ 234 (345)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCSH--HH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHT
T ss_pred hCCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCcH--HH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhccc
Confidence 8999999886542 345788889999999999999998521 11 12344667789999999999999999998643
Q ss_pred --CCChhHHHHHHHhc------CCCeEEEEeeCCcceEEEecCceeeecCccc---ccccCCCCchHHHHHHHHHHHhcC
Q 018696 234 --DHNDDNVVLEKLFH------PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKT---KAVDTTGAGDSFVSGILNCLAADQ 302 (351)
Q Consensus 234 --~~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~---~~vd~tGaGD~f~ag~~~~l~~g~ 302 (351)
..++..+++++|.+ .|++.||||+|++|++++.+++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~ 314 (345)
T 1bx4_A 235 GFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDK 314 (345)
T ss_dssp TCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCC
Confidence 23445567788887 6999999999999999998888889999877 899999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 303 NLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 303 ~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+ +++|+++|+++|+.++++.|+.
T Consensus 315 ~-------~~~a~~~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 315 P-------LTECIRAGHYAASIIIRRTGCT 337 (345)
T ss_dssp C-------HHHHHHHHHHHHHHHTTSSSSC
T ss_pred C-------HHHHHHHHHHHHHHHHhccCCC
Confidence 9 9999999999999999999975
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=310.65 Aligned_cols=288 Identities=20% Similarity=0.272 Sum_probs=237.1
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.|++++|+++.++..... .+......+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 1 mi~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~ 79 (306)
T 2abq_A 1 MIYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLS 79 (306)
T ss_dssp CEEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceE
Confidence 35899999999999988875322 24467889999999999999999999999999998 799999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh---hcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
++...+ .|++++.+ .+|++.... .+++ .+++++++. +. +++++++|+++.... ....+.+.++++.
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~--~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2abq_A 80 FIEVEG--DTRINVKI--KGKQETELN--GTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQ-AMPQTIYRSMTQI 150 (306)
T ss_dssp CEEESS--CCEEEEEE--ESSSCEEEB--CCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCC--CCceEEEE--eCCceEEEE--CCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCC-CCCHHHHHHHHHH
Confidence 987754 36666655 467775432 2333 355555432 11 578999998775432 2344678889999
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++++.++++||+. +.+.++++ ++|++++|++|+..+++.... ++..+.++++.+.|++.|+||.
T Consensus 151 a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2abq_A 151 AKERGAFVAVDTSG------------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSF 218 (306)
T ss_dssp HHTTTCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHhcCCEEEEECCh------------HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 99999999999951 24567888 999999999999999987543 2334567888889999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
|++|++++.+++.+++|+++++++|+|||||+|.|||+++|++|++ +++|+++|+++|+.++++. .+|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~----~~p~ 287 (306)
T 2abq_A 219 AGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSD----GFCT 287 (306)
T ss_dssp GGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSS----SCCC
T ss_pred CCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCc----CCCC
Confidence 9999999988888899999999999999999999999999999999 9999999999999999998 5689
Q ss_pred HHHHHHHHhhhc
Q 018696 338 KEAALKLLHTVA 349 (351)
Q Consensus 338 ~~~v~~~l~~~~ 349 (351)
.+++++++++++
T Consensus 288 ~~ev~~~~~~~~ 299 (306)
T 2abq_A 288 REEVERLQQQLQ 299 (306)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhEE
Confidence 999999998765
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-42 Score=310.85 Aligned_cols=279 Identities=20% Similarity=0.282 Sum_probs=225.1
Q ss_pred CCCCceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHC
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN 100 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~ 100 (351)
..++++|+++|++++|++..++..|.. ........+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.
T Consensus 14 ~~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~ 93 (312)
T 2hlz_A 14 VPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRY 93 (312)
T ss_dssp ---CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHT
T ss_pred CCCCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHc
Confidence 345678999999999999887766543 2334568899999999999999999999999999999999999999999
Q ss_pred CCCCCCeeecCCCCCeEEEEEEe-cCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHH
Q 018696 101 NVDTSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (351)
Q Consensus 101 gid~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
||+++++...++.+|++.+++++ .+|++++..++ ++...+++++++...+++++++|+++.. .+...++++
T Consensus 94 GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~~~~~~~~ 165 (312)
T 2hlz_A 94 SVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHIEGRN------ASEQVKMLQ 165 (312)
T ss_dssp TCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEEECSS------HHHHHHHHH
T ss_pred CCCCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEEeccC------HHHHHHHHH
Confidence 99999998876667888777766 47888887663 3445577766655567889999998762 245566677
Q ss_pred HHHHc--------CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCC-
Q 018696 180 LAKES--------GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL- 250 (351)
Q Consensus 180 ~a~~~--------~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~- 250 (351)
.+++. +.++++|+... ++.+.++++++|++++|++|++.+ +.. +..++++.+.+.+.
T Consensus 166 ~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~~---~~~~~~~~l~~~~~~ 231 (312)
T 2hlz_A 166 RIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GFQ---SAEEALRGLYGRVRK 231 (312)
T ss_dssp HHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TCC---SHHHHHHHHGGGSCT
T ss_pred HHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CCC---CHHHHHHHHHHhcCC
Confidence 77765 68899998532 134567899999999999999987 532 23345566665433
Q ss_pred -eEEEEeeCCcceEEEec-CceeeecCcc-cccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 251 -KLLIVTEGSKGCRYYTK-EFKGRVPGVK-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 251 -~~vvvt~G~~G~~~~~~-~~~~~v~~~~-~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
+.|+||+|++|++++.+ ++.+++|+++ ++++|||||||+|.|+|+++|++|++ +++|+++|+++|+.+++
T Consensus 232 g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 232 GAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGKKCG 304 (312)
T ss_dssp TCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 89999999999999875 4578899964 68999999999999999999999999 99999999999999999
Q ss_pred ccCCC
Q 018696 328 ERGAI 332 (351)
Q Consensus 328 ~~g~~ 332 (351)
+.|+.
T Consensus 305 ~~G~~ 309 (312)
T 2hlz_A 305 LQGFD 309 (312)
T ss_dssp SSSSG
T ss_pred hcCcc
Confidence 99863
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=314.99 Aligned_cols=292 Identities=20% Similarity=0.264 Sum_probs=231.0
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v 107 (351)
|+|+|+|++++|++.... ......+||++.|+|.+|++||. +|.++|.+|+| +|+.+++.|++.||+++++
T Consensus 3 ~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v 74 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGI 74 (313)
T ss_dssp CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEE
T ss_pred ccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCccce
Confidence 579999999999997532 23578999999999999999999 99999999999 9999999999999999999
Q ss_pred eecCCCCCeEEEEE--EecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcC
Q 018696 108 RYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG 185 (351)
Q Consensus 108 ~~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 185 (351)
.+.++.+|....-. .+.++++.+... .+....+.+. + .+.+++++++|++++. .+...++++.+ +.+
T Consensus 75 ~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~------~~~~~~~~~~~-~~~ 143 (313)
T 3kd6_A 75 QVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID------PELQLKVLDQI-DDP 143 (313)
T ss_dssp EEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC------HHHHHHHHTTC-SSC
T ss_pred EEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC------HHHHHHHHHHH-hhC
Confidence 88877677432211 122333333322 2333333332 2 3567899999997742 34455666666 578
Q ss_pred CeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 186 ~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
.++++||. .+|. +...+.+.++++++|++++|++|++.+++.. +..++++.|.+.|++.|+||.|++|++++
T Consensus 144 ~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 215 (313)
T 3kd6_A 144 KLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP---NLVKTARIIREMGPKTLIIKKGEHGALLF 215 (313)
T ss_dssp SEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS---CHHHHHHHHHTTSCSEEEEECTTSCEEEE
T ss_pred CEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC---CHHHHHHHHHHcCCCEEEEeeCCCcEEEE
Confidence 89999983 1221 2345677788999999999999999999864 34457788999999999999999999999
Q ss_pred ecCceeeecCccc-ccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCC-CCCHHHHHH
Q 018696 266 TKEFKGRVPGVKT-KAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPA-LPTKEAALK 343 (351)
Q Consensus 266 ~~~~~~~v~~~~~-~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~-~~~~~~v~~ 343 (351)
.+++.+++|++++ +++|||||||+|+|||+++|++|.+. ...++++|+++|+++|+.++++.|+.+. .|+.+++++
T Consensus 216 ~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~--~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~~ 293 (313)
T 3kd6_A 216 TDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVDD 293 (313)
T ss_dssp ETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHHH
T ss_pred ECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCc--cccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHHH
Confidence 9988999999998 79999999999999999999999820 1123999999999999999999998743 589999999
Q ss_pred HHhhhc
Q 018696 344 LLHTVA 349 (351)
Q Consensus 344 ~l~~~~ 349 (351)
++++..
T Consensus 294 ~l~~~~ 299 (313)
T 3kd6_A 294 RYQSFL 299 (313)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997654
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=321.22 Aligned_cols=291 Identities=21% Similarity=0.277 Sum_probs=236.5
Q ss_pred CCCCceEEEEccceeecccCCCC-C-----CCC-----------------CCCCccccCCChHHHHHHHHHHc---CCCe
Q 018696 25 GAYDRLVVCFGEMLIDFVPTVGG-V-----SLA-----------------EAPAFKKAPGGAPANVAVGISRL---GGSS 78 (351)
Q Consensus 25 ~~~~~~i~v~G~~~iD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v 78 (351)
.+++++|+|+|++++|+++..+. . +.. +.......+||++.|+|++|++| |.+|
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v 108 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSA 108 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSE
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcE
Confidence 34567899999999999987765 1 111 13356788999999999999999 8999
Q ss_pred EEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEE
Q 018696 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIF 158 (351)
Q Consensus 79 ~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~ 158 (351)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|++++..+ .+++..+++++...+.+++++++
T Consensus 109 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v 184 (383)
T 2abs_A 109 GYMGAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIF 184 (383)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEE
T ss_pred EEEEEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEE
Confidence 999999999999999999999999999886 55679999999887 687876554 55565566654445678899999
Q ss_pred EEccccccCchhHHHHHHHHHHHHH-cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC---
Q 018696 159 HYGSISLIAEPCRSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD--- 234 (351)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--- 234 (351)
|++++... .+.+.+.++++.+++ .++++++||.. .+| .+...+.+.++++++|++++|++|++.+++...
T Consensus 185 ~~~g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~ 258 (383)
T 2abs_A 185 YATAYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA 258 (383)
T ss_dssp EEEGGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-
T ss_pred EEeeeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccc
Confidence 99986542 345788889999998 89999999852 112 133456677889999999999999999976431
Q ss_pred -----------CChhHHHHHHHhc------C-CCeEEEEeeCCcceEEE-----ecCceeeecCccc---ccccCCCCch
Q 018696 235 -----------HNDDNVVLEKLFH------P-NLKLLIVTEGSKGCRYY-----TKEFKGRVPGVKT---KAVDTTGAGD 288 (351)
Q Consensus 235 -----------~~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~-----~~~~~~~v~~~~~---~~vd~tGaGD 288 (351)
.++..+++++|.+ . |++.||||+|++|++++ .+++.+++|++++ +++|||||||
T Consensus 259 ~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGD 338 (383)
T 2abs_A 259 AEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGD 338 (383)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHH
T ss_pred ccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHH
Confidence 2233456677776 4 89999999999999988 5557788898877 8999999999
Q ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 289 SFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 289 ~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
+|+|||+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 339 aF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 339 AFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999 9999999999999999999985
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=307.12 Aligned_cols=288 Identities=21% Similarity=0.248 Sum_probs=234.6
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-++|.|++++|+++.++..... ........+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++
T Consensus 1 mi~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~ 79 (306)
T 2jg5_A 1 MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSN 79 (306)
T ss_dssp CEEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCcee
Confidence 35899999999999988874322 24467889999999999999999999999999999 699999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh---hcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
++...+ .|++++.+ .+|++..... ++++ +++++++. +. +++++++|+++.... ....+.+..+++.
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2jg5_A 80 FIEVDE--DTRINVKL--KTGQETEINA--PGPH--ITSTQFEQLLQQIKNTTSEDIVIVAGSVPS-SIPSDAYAQIAQI 150 (306)
T ss_dssp CEECSS--CCEEEEEE--ESSSEEEEEC--CCCC--CCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCC--CCeEEEEE--cCCCEEEEEC--CCCC--CCHHHHHHHHHHHHhccCCCEEEEeCCCCC-CCChHHHHHHHHH
Confidence 987654 36666654 4677654332 3332 55555432 11 578999998765322 2234677788899
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhhhcCCCCCC--hhHHHHHHHhcCCCeEEEEee
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITFLTGGDDHN--DDNVVLEKLFHPNLKLLIVTE 257 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~--~~~~~~~~l~~~g~~~vvvt~ 257 (351)
+++++.++++||+. ..+.++++ ++|++++|++|++.+++....+ +..+.++++.+.|++.|+||+
T Consensus 151 a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2jg5_A 151 TAQTGAKLVVDAEK------------ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL 218 (306)
T ss_dssp HHHHCCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHCCCEEEEECCh------------HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEcc
Confidence 99999999999851 23455677 6999999999999999865432 334567788889999999999
Q ss_pred CCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCC
Q 018696 258 GSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 337 (351)
Q Consensus 258 G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~ 337 (351)
|++|++++.+++.+++|+++++++|++||||+|+|||+++|++|++ +++|+++|+++|+.++++.| +|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G----~~~ 287 (306)
T 2jg5_A 219 GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGTATAFDED----LAT 287 (306)
T ss_dssp GGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS----SCC
T ss_pred CCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC----CCC
Confidence 9999999988888899999999999999999999999999999999 99999999999999999998 589
Q ss_pred HHHHHHHHhhhc
Q 018696 338 KEAALKLLHTVA 349 (351)
Q Consensus 338 ~~~v~~~l~~~~ 349 (351)
.+++++++++++
T Consensus 288 ~~ev~~~~~~~~ 299 (306)
T 2jg5_A 288 RDAIEKIKSQVT 299 (306)
T ss_dssp HHHHHHHHTTCE
T ss_pred HHHHHHHHhceE
Confidence 999999998764
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=285.09 Aligned_cols=269 Identities=20% Similarity=0.183 Sum_probs=213.0
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
.|.++|.+..|.+.... .....+||++.|+|.+|++||.++.++|.+|+|. +.+++.|++.||+++++..
T Consensus 13 ~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~ 82 (298)
T 1vk4_A 13 MITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS 82 (298)
T ss_dssp EEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC
T ss_pred eEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec
Confidence 48999999999988653 4568899999999999999999999999999996 7888999999999997753
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
..+|++..++ +.+|++++..+ .+++..++++++.. ..++++|++++.. .+ ...++++.+++.+.+++
T Consensus 83 --~~~t~~~~i~-~~~g~~~~~~~--~~~~~~l~~~~~~~---~~~~~v~~~~~~~-~~----~~~~~~~~~~~~g~~v~ 149 (298)
T 1vk4_A 83 --PRTTSIENRY-GSDPDTRESFL--ISAADPFTESDLAF---IEGEAVHINPLWY-GE----FPEDLIPVLRRKVMFLS 149 (298)
T ss_dssp --SSCEEEEEEC------CCEEEE--EECCCCCCGGGGGG---CCSSEEEECCSST-TS----SCGGGHHHHHHHCSEEE
T ss_pred --CCCcEEEEEE-cCCCCeeEEEe--ccccccCCHHHcCc---CCCCEEEECCccc-cc----ccHHHHHHHHHcCCEEE
Confidence 3455555443 55677776655 34445566665532 5789999988633 12 22356677788899999
Q ss_pred EcCCCC----------CCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCC
Q 018696 190 YDPNLR----------LPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGS 259 (351)
Q Consensus 190 ~d~~~~----------~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 259 (351)
+||+.. ...| +.+.++++++|++++|++|++.+++..+ ..+++++|.+.|++.||||. +
T Consensus 150 ~D~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~~~l~~~g~~~vvvT~-~ 218 (298)
T 1vk4_A 150 ADAQGFVRVPENEKLVYRDW-------EMKEKYLKYLDLFKVDSREAETLTGTND---LRESCRIIRSFGAKIILATH-A 218 (298)
T ss_dssp EETHHHHEEEETTEEEECCC-------TTHHHHGGGCSEEEEEHHHHHHHHSCSC---HHHHHHHHHHTTCSSEEEEE-T
T ss_pred EecCccccccccccccccch-------HHHHhhcccCCEEecCHHHHHHHhCCCC---HHHHHHHHHhcCCCEEEEEc-C
Confidence 999621 1112 1356788999999999999999998653 34467788889999999999 9
Q ss_pred cceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh-cCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 260 KGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 260 ~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
+|++++.+ +.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++|+.++++.|+.+. |+.
T Consensus 219 ~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~-~~~ 289 (298)
T 1vk4_A 219 SGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGPLRR-EDL 289 (298)
T ss_dssp TEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSSCCG-GGG
T ss_pred CCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCCCC-CCH
Confidence 99999877 78889999999999999999999999999999 999 999999999999999999998754 566
Q ss_pred HHH
Q 018696 339 EAA 341 (351)
Q Consensus 339 ~~v 341 (351)
+++
T Consensus 290 ~el 292 (298)
T 1vk4_A 290 EAI 292 (298)
T ss_dssp GGC
T ss_pred HHH
Confidence 554
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=196.50 Aligned_cols=226 Identities=15% Similarity=0.152 Sum_probs=162.1
Q ss_pred cCCCeEE-EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch---
Q 018696 74 LGGSSAF-VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--- 149 (351)
Q Consensus 74 lG~~v~~-v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--- 149 (351)
||+.... +|.+|.| .....|++.||++.++.. . +..+.+|.+.+ .. ..++++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~-----~g--~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTF-----YG--GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCC-----CE--EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCce-----ee--eeCCHHHHHHHHH
Confidence 3444343 6677766 235688889999887642 1 22233454432 11 1233333321
Q ss_pred ---h--hhcCccEEEEccccccCchhHHHHHHHHHHHHH--cCCeEEEcCCCCC---CCCCCHHHHHHHHHHhhhcCcEE
Q 018696 150 ---N--LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADII 219 (351)
Q Consensus 150 ---~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl 219 (351)
+ .++++++++++.+. .....+.+.++++.+++ .++++++||+.+. ..|.+.+.......++++++|++
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 1 35678999987643 23345778888888887 7899999998654 34433322333345688999999
Q ss_pred EeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc-------ceEEEecCceeeecCcccccccCCCCchHH
Q 018696 220 KVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-------GCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290 (351)
Q Consensus 220 ~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f 290 (351)
++|+.|++.+++.... ++..+.++++.+.|++.||||.|++ |++++.+++.++++++++. +|++||||+|
T Consensus 157 ~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf 235 (283)
T 2ddm_A 157 TPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLF 235 (283)
T ss_dssp CCBHHHHHHHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHH
T ss_pred cCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHH
Confidence 9999999999987543 2344567889999999999999999 8888888878888888876 8999999999
Q ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 291 VSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 291 ~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
.|+|++++++|++ +++|+++|+++++.++++.
T Consensus 236 ~a~~~~~l~~g~~-------~~~A~~~A~a~a~~~v~~~ 267 (283)
T 2ddm_A 236 CAQLISGLLKGKA-------LTDAVHRAGLRVLEVMRYT 267 (283)
T ss_dssp HHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999875
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=201.60 Aligned_cols=219 Identities=18% Similarity=0.160 Sum_probs=159.4
Q ss_pred CeEEEeecCCChHHHHHHHHHHHCCCCCCCeeec--CCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hh-
Q 018696 77 SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD--STARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL- 151 (351)
Q Consensus 77 ~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~--~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~- 151 (351)
++.++|.+|+|. |+.+ |++.||+++++... .+ +|++.+ + .+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHH
Confidence 467889999997 9888 99999999887653 21 222111 1 11 1244444431 11
Q ss_pred ----hcCccEEEEccccccCchhHHHHHHHHHHHHHcCC--eEEEcCCCCCC------CCCCHHHHHHHHHH-hhhcCcE
Q 018696 152 ----IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS--ILSYDPNLRLP------LWPSEEAAREGIMS-IWDQADI 218 (351)
Q Consensus 152 ----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~v~~d~~~~~~------~~~~~~~~~~~~~~-~l~~~dv 218 (351)
+.++++++++... .....+.+.++++.++++|. ++++||+.+.. +|.. +.+.+.+.+ +++++|+
T Consensus 70 ~~~~~~~~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~di 146 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADI 146 (312)
T ss_dssp HHTTCCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSE
T ss_pred HhcCCccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCE
Confidence 6678998875432 33345667788888888875 48999986533 3432 234556664 8999999
Q ss_pred EEeCHHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc------ceEEE-------ec-C----ceeeecCccc
Q 018696 219 IKVSDDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK------GCRYY-------TK-E----FKGRVPGVKT 278 (351)
Q Consensus 219 l~~N~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~v~~~~~ 278 (351)
+++|+.|++.+++.... ++..+++++|++.|++.||||.|+. |++++ .+ + +.+++|++++
T Consensus 147 l~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 147 ITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp ECCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred EcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 99999999999986533 2344567888889999999998876 46665 33 2 5678888888
Q ss_pred ccccCCCCchHHHHHHHHHHHh-cCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 279 KAVDTTGAGDSFVSGILNCLAA-DQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 279 ~~vd~tGaGD~f~ag~~~~l~~-g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
++ |++||||+|.|+|+++|++ |++ +++|+++|+++++.++++
T Consensus 227 ~v-dttGAGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 DA-VFVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SS-CCSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCchHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 86 9999999999999999999 999 999999999999888864
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=180.23 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=125.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHcCCe-EEEcCCCCC----CCCCCHHHHHHHHHH-hhhcCcEEEeCHHHHhh
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRL----PLWPSEEAAREGIMS-IWDQADIIKVSDDEITF 228 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~ 228 (351)
+++++++.+. +.+.+..+++.+++.+.+ +++||+.+. .+|. . ...+.+.+ +++++|++++|+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~-~-~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS-P-SAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC-H-HHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC-H-HHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6787776531 456778888899999986 999998653 2342 2 23344554 78999999999999999
Q ss_pred hcCC-CCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 229 LTGG-DDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 229 l~~~-~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
|++. ... ++..+++++|.+.|++.||||.|++| ++++.+++.+++++++++++|++||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 433 23345678888899999999999999 888887778889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|.+ +++|+++|+++++.++++.
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999776
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.3e-21 Score=168.71 Aligned_cols=164 Identities=18% Similarity=0.130 Sum_probs=132.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCC-eEEEcCCCCCCCCCC--HHHHHHHHH-HhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRLPLWPS--EEAAREGIM-SIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~~~~~~--~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 229 (351)
..++++++.+. ..+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|++++|+.|++.|
T Consensus 74 ~~d~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGMLP-----TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 67888886532 14677778888888888 599999876543321 122334554 7889999999999999999
Q ss_pred cCCC-CCC--hhHHHHHHHhcCCCeEEEEeeCC--cce----EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 230 TGGD-DHN--DDNVVLEKLFHPNLKLLIVTEGS--KGC----RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 230 ~~~~-~~~--~~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
++.. ..+ +..+.++++.+.|++.||||.|. +|+ +++.+++.+++++++++++|++|+||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9875 322 34456788889999999999999 784 66777778889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999875
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-20 Score=165.30 Aligned_cols=162 Identities=19% Similarity=0.170 Sum_probs=127.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcC-CeEEEcCCCCCC----CCCCHHHHHHHH-HHhhhcCcEEEeCHHHHh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP----LWPSEEAAREGI-MSIWDQADIIKVSDDEIT 227 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~----~~~~~~~~~~~~-~~~l~~~dvl~~N~~E~~ 227 (351)
..+.++++.+. ..+....+++.+++.+ .++++||+.+.. +|. . ...+.+ .++++++|++++|+.|++
T Consensus 70 ~~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~-~-~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGALG-----DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA-K-EAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEECCCC---------C-H-HHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC-h-HHHHHHHHhhcccCeEEeCCHHHHH
Confidence 35777776431 3456777888888888 899999986543 332 2 222344 457899999999999999
Q ss_pred hhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc-c----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh
Q 018696 228 FLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK-G----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA 300 (351)
Q Consensus 228 ~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~ 300 (351)
.+++.... ++..+.+++|.+.|++.|++|.|++ | ++++.+++.+++++++++++|++||||+|.|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 99987543 2344567888889999999999998 8 778777788889998899999999999999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 301 DQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 301 g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999998764
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=161.30 Aligned_cols=166 Identities=17% Similarity=0.129 Sum_probs=131.9
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCC--CCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP--LWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~--~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+ .+....+.+.++++.+++.+.++++||..... +|. ..++..+.+.++++++|++++|..|++.|+
T Consensus 77 ~~~aik~G~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGYL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECCC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 5677777643 24445677778888776678999999987643 343 234566677889999999999999999999
Q ss_pred CCCC-----CChhHHHHHHHhcCCCeEEEEeeCC-------cceEEEecC--ceeeecCcccccccCCCCchHHHHHHHH
Q 018696 231 GGDD-----HNDDNVVLEKLFHPNLKLLIVTEGS-------KGCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 231 ~~~~-----~~~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
|... .++..+++++|.+.|++.|+||.|. .|++++.++ +.++++.+.+. +|++|+||+|.|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 9763 2345567888999999999999653 577777653 45677777765 8999999999999999
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 297 CLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
+|++|.+ +++|+++|+++++.++++.
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999998888764
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-19 Score=158.68 Aligned_cols=165 Identities=18% Similarity=0.099 Sum_probs=131.1
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcC--CeEEEcCCCCC----CCCCCHHHHHHHHH-HhhhcCcEEEeCHHH
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVSDDE 225 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~v~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E 225 (351)
...|++..+. +......+.+.++++.+++++ .++++||.... .+| . +...+.+. .+++++|++++|..|
T Consensus 76 ~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~-~-~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIV-A-PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECS-C-HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCccc-C-HHHHHHHHHHhhccCCEEeCCHHH
Confidence 5788876554 334556678888898888766 88999996432 233 2 34455555 488999999999999
Q ss_pred HhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeC-Ccce-------EEEecCceeeecCccccc--ccCCCCchHHHHH
Q 018696 226 ITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEG-SKGC-------RYYTKEFKGRVPGVKTKA--VDTTGAGDSFVSG 293 (351)
Q Consensus 226 ~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~v~~~~~~~--vd~tGaGD~f~ag 293 (351)
++.|+|.... ++..+++++|.+.|++.|+||.| .+|+ +++++++.++++++.++. +|++|+||+|.|+
T Consensus 152 ~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~ 231 (289)
T 3pzs_A 152 LEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGL 231 (289)
T ss_dssp HHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHH
Confidence 9999997643 34455688899999999999985 5786 777777778888777776 9999999999999
Q ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 294 ILNCLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 294 ~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
|++++++|.+ +++|+++|+++++.+++.
T Consensus 232 ~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 232 LLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999988777765
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=156.87 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=126.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC--CCCC-CHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWP-SEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+ .+....+.+.++++.. .+.++++||+.+. .+|. ..++..+.++++++++|++++|..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 6778877643 2222333444444332 3689999998764 3343 234566677789999999999999999999
Q ss_pred CCCC--CChhHHHHHHHhc-CCC-eEEEEeeCC----cceEEEe-cCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 231 GGDD--HNDDNVVLEKLFH-PNL-KLLIVTEGS----KGCRYYT-KEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 231 ~~~~--~~~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~-~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
+... .++..+++++|.+ .|+ +.|+||.|. .|++++. +++.++++++++. +|++|+||+|.|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 8753 2455667888998 999 999999994 7888885 6667778877764 899999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 302 QNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
.+ +++|+++|+++++.++++
T Consensus 229 ~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999999888875
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-18 Score=151.55 Aligned_cols=165 Identities=13% Similarity=0.063 Sum_probs=123.3
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcC------CeEEEcCCCCCC--CCCCHHHHHHHHHHhhhcCcEEEeCHH
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG------SILSYDPNLRLP--LWPSEEAAREGIMSIWDQADIIKVSDD 224 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~------~~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~dvl~~N~~ 224 (351)
.++|++..+.+ .+....+.+.++++..++.+ .++++||..... +|. .+...+.++++++++|+++||..
T Consensus 75 ~~~daV~tG~l--~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGYI--NNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECCC--CCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 46788766543 34445677778888877655 799999976543 553 34556667779999999999999
Q ss_pred HHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc-------eEEEec------CceeeecCcccccccCCCCchH
Q 018696 225 EITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG-------CRYYTK------EFKGRVPGVKTKAVDTTGAGDS 289 (351)
Q Consensus 225 E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~v~~~~~~~vd~tGaGD~ 289 (351)
|++.|+|.... ++..+++++|.+.|++.|+||.|..| +++..+ ++.++++.+.++. +++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 99999997643 34455678888999999999999987 333334 4667777777766 89999999
Q ss_pred HHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 290 FVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 290 f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
|.|+|+++| +|.+ +++|+++|.+....+++..
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 9999999999977777653
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-14 Score=127.30 Aligned_cols=164 Identities=16% Similarity=0.070 Sum_probs=114.2
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEIT 227 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 227 (351)
+.++.++++++..-. ..+...+.+.++++.+++.+.++++||..... .. ...+...++++ ++|+|+||..|+.
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~~-~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---cc-chHHHHHHHHccCCCeEECCCHHHHH
Confidence 345667877663222 23344577788888888999999999964321 11 11233445666 8999999999999
Q ss_pred hhcCCC-C----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHH
Q 018696 228 FLTGGD-D----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 228 ~l~~~~-~----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
.|+|.. . .++..+.+++|.+.+...|++| |..+ ++.++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999865 2 2233455677766544455555 9887 4556667788888777788999999999888888
Q ss_pred HHHhcCCcccchHHHHHHHHHHHH----HHhHHhc
Q 018696 297 CLAADQNLIKDENRLREALLFANA----CGALTVT 327 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~----~Aa~~i~ 327 (351)
.+++|.+ +.+|+++|+. ++..+.+
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888998 9999999986 5544444
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=140.82 Aligned_cols=162 Identities=17% Similarity=0.110 Sum_probs=119.9
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCC----CCCCCHHHHHHHHH-HhhhcCcEEEeCHHHHhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVSDDEITF 228 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~ 228 (351)
..+.+.++.+ +....+.+.++++..++.+.++++||+... .++ +. +..+.+. ++++.+|+++||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~-~~-~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLA-GK-DIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC----------CT-THHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCC-CH-HHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788888754 455566677777777666889999997542 222 22 2334444 788999999999999999
Q ss_pred hcCCC----CCChhHHHHHHHhcCCC-eEEEEeeCCcc--------e--EEE--ecCceeeecCcccccccCCCCchHHH
Q 018696 229 LTGGD----DHNDDNVVLEKLFHPNL-KLLIVTEGSKG--------C--RYY--TKEFKGRVPGVKTKAVDTTGAGDSFV 291 (351)
Q Consensus 229 l~~~~----~~~~~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~v~~~~~~~vd~tGaGD~f~ 291 (351)
|+|.. +.++..+++++|.+.|. +.||||.|..+ + +++ .+++.++++.+.++.+|++|+||+|.
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99963 22345567788888876 79999998763 3 455 34567778888888899999999999
Q ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhc
Q 018696 292 SGILNCLAADQNLIKDENRLREALLFANACGALTVT 327 (351)
Q Consensus 292 ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~ 327 (351)
|+++++|++|.+ +++|+++|+......++
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999965444443
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.22 E-value=8.8e-11 Score=102.91 Aligned_cols=156 Identities=16% Similarity=0.077 Sum_probs=104.9
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh-cCcEEEeCHHHHhh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVSDDEITF 228 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~ 228 (351)
+.++.++.+.+..-. ..+...+.+..+++.+++.+.++++||..... +. ...+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEECC-CCHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 456778888775332 23333456667788888899999999964321 11 11222334443 39999999999999
Q ss_pred hcCCCC----------C-ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHH
Q 018696 229 LTGGDD----------H-NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNC 297 (351)
Q Consensus 229 l~~~~~----------~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~ 297 (351)
|+|... . ++....++++.+.+...|++| |..+. ++++++.+.++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 987541 1 233455777776555556666 87775 4566677777776656679999999999999999
Q ss_pred HHhcCCcccchHHHHHHHHHHHH
Q 018696 298 LAADQNLIKDENRLREALLFANA 320 (351)
Q Consensus 298 l~~g~~~~~~~~~~~~a~~~a~~ 320 (351)
+++|.+ .+|+..|..
T Consensus 205 lA~g~~--------~~Aa~~a~~ 219 (265)
T 1v8a_A 205 VAVTEP--------LKATTSALV 219 (265)
T ss_dssp HTTSCH--------HHHHHHHHH
T ss_pred HhcCCC--------HHHHHHHHH
Confidence 999873 455555554
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.11 E-value=9e-10 Score=98.49 Aligned_cols=172 Identities=13% Similarity=0.065 Sum_probs=103.5
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh-h-hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-W-DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l-~~~dvl~~N~~E~~~ 228 (351)
.++..+.+.++.-...++...+.+.++++..+ .+.++++|+. .......-.++ + +..++|+||..|++.
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44567888776322223333345555555433 4789999983 11111110011 3 468899999999999
Q ss_pred hcCCCCCC---hh-HHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHh-cCC
Q 018696 229 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAA-DQN 303 (351)
Q Consensus 229 l~~~~~~~---~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~-g~~ 303 (351)
|++....+ +. .+.++++.+ + .+|+..| .+.++++ ++..++.....+..+++|+||+|.+.+.+.+++ |.+
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~Lag~iaa~lA~~g~~ 267 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTD 267 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHHCCSC
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHHHHHHHHHHHccCCC
Confidence 99876432 22 345666666 5 3566666 4566666 444455566677889999999984444444568 999
Q ss_pred cccchHHHHHHHHHHHHHHhHHhcc---cCCCCCCCCHHHHHHHHh
Q 018696 304 LIKDENRLREALLFANACGALTVTE---RGAIPALPTKEAALKLLH 346 (351)
Q Consensus 304 ~~~~~~~~~~a~~~a~~~Aa~~i~~---~g~~~~~~~~~~v~~~l~ 346 (351)
+.+|+++|+.+.+.+-+. .| . + ....+|.+.|.
T Consensus 268 -------~~eA~~~A~~~~~~ag~~a~~~g-~-~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 268 -------RFEVAAAAVFLHSYIADQLSKEA-Y-V-VLPTRISAEIT 303 (311)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTTC-S-S-CCHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhhC-C-C-CCHHHHHHHHH
Confidence 999999997666654332 24 2 3 35666655543
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.2e-09 Score=95.97 Aligned_cols=169 Identities=12% Similarity=-0.006 Sum_probs=101.8
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh--hcCcEEEeCHHHHhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVSDDEITF 228 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~~ 228 (351)
.++.++.+.++.-...+....+.+.++++..+ .+.++++||. .......-.+++ +..+||+||..|++.
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 34567888776322223333345555555433 5789999983 111111100112 467899999999999
Q ss_pred hcCCCCCC---hh-HHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCc
Q 018696 229 LTGGDDHN---DD-NVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304 (351)
Q Consensus 229 l~~~~~~~---~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~ 304 (351)
|++....+ +. .++++++ ++ +|+..|. +.++++ ++..++.....+..+++|+||+|.+.+.+.+++|.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG~-~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~- 250 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS--TIVLKSH-RTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP- 250 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS--EEEECST-TCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc--EEEEeCC-ceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 99875432 22 4456666 54 5666664 555665 433455555667788999999975555555569999
Q ss_pred ccchHHHHHHHHHHHHHHhHHhcc---cCCCCCCCCHHHHHHHH
Q 018696 305 IKDENRLREALLFANACGALTVTE---RGAIPALPTKEAALKLL 345 (351)
Q Consensus 305 ~~~~~~~~~a~~~a~~~Aa~~i~~---~g~~~~~~~~~~v~~~l 345 (351)
+.+|++.|+.+.+..-+. .| ++ ....+|.+.|
T Consensus 251 ------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l 285 (310)
T 2r3b_A 251 ------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQAL 285 (310)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHH
Confidence 899999887666654331 24 23 3555665544
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-08 Score=87.95 Aligned_cols=159 Identities=14% Similarity=0.039 Sum_probs=106.3
Q ss_pred hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHh
Q 018696 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEIT 227 (351)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~ 227 (351)
.+..+.++.+.+.--. ..+...+.+...++.+++.+.|+++||..... +.. ..+....++ .++++|.+|..|+.
T Consensus 53 ~e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~~-r~~~~~~Ll~~~~~VItpN~~E~~ 127 (273)
T 3dzv_A 53 PQMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SDI-RNEVGEKLVHNQPTVVKGNLSEMR 127 (273)
T ss_dssp HHHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CHH-HHHHHHHHHHTCCSEEEEEHHHHH
T ss_pred HHHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---ccc-CHHHHHHHHhcCCcEECCCHHHHH
Confidence 3456777887765433 33434567777888899999999999964321 111 112222222 37899999999999
Q ss_pred hhcCCCCC----C------------hhHHHHHHHhcCCC-eEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHH
Q 018696 228 FLTGGDDH----N------------DDNVVLEKLFHPNL-KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSF 290 (351)
Q Consensus 228 ~l~~~~~~----~------------~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f 290 (351)
.|+|.... + +....++++.+... ..|++|- ... +++++++.+.++.-....-.++|.||++
T Consensus 128 ~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG-~~D-~i~dg~~~~~~~~G~~~~~~v~GtGc~L 205 (273)
T 3dzv_A 128 TFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATG-IQD-VLVSQEQVIVLQNGVPELDCFTGTGDLV 205 (273)
T ss_dssp HHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEES-SSE-EEECSSCEEEECCCCGGGGSSTTHHHHH
T ss_pred HHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEEC-Cee-EEEcCCEEEEeCCCCcccCCcCCchHHH
Confidence 99986521 1 22345667766544 5566654 433 4455556667766555556679999999
Q ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Q 018696 291 VSGILNCLAADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 291 ~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
.|.+.+.+++|.+ +.+|+..|...
T Consensus 206 s~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 206 GALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 9999999999998 88888877654
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-07 Score=83.57 Aligned_cols=170 Identities=15% Similarity=0.086 Sum_probs=106.3
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
++.+|++.++.-.-.+ +...++++.+.+.+.++++|...... +.+ ......+||+||..|++.|++
T Consensus 96 l~~~davviGPGlg~~----~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l-~~~~~~~vlTPN~~E~~~L~g 161 (279)
T 3rpz_A 96 EETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAK---------RTY-PKREGPVILTPHPGEFFRMTG 161 (279)
T ss_dssp SSCCSEEEECTTCCCC----HHHHHHHHHHTTSSSCEEECGGGCCS---------CCC-CCCSSCEEECCCHHHHHHHHC
T ss_pred ccCCCEEEECCCCCCC----HHHHHHHHHHHhhCCCEEEECCccch---------hhh-hhccCCEEEecCHHHHHHHhC
Confidence 4678888886432121 23345556666678899999742210 000 012467899999999999999
Q ss_pred CCCC---ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccch
Q 018696 232 GDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308 (351)
Q Consensus 232 ~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~ 308 (351)
.... ++....++++.+.+.. +|+-.|. +.+++++++.+++........+++|+||++.+.+.+.+++|.+
T Consensus 162 ~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~----- 234 (279)
T 3rpz_A 162 VPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED----- 234 (279)
T ss_dssp CCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-----
T ss_pred CCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC-----
Confidence 7632 2334456666653322 5555565 3455565545556555566788999999986666666779998
Q ss_pred HHHHHHHHHHHH----HHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 309 NRLREALLFANA----CGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 309 ~~~~~a~~~a~~----~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+.+|+..|+. ++-...++.|.. + ....||.+.+.
T Consensus 235 --~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp 272 (279)
T 3rpz_A 235 --PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILP 272 (279)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9999998874 444445555543 2 35666666553
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.72 E-value=5.1e-07 Score=83.96 Aligned_cols=167 Identities=11% Similarity=0.065 Sum_probs=99.3
Q ss_pred cccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCC-----Ce---e----ecCCCCCeEEEEEEe
Q 018696 57 KKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTS-----GV---R----YDSTARTALAFVTLR 123 (351)
Q Consensus 57 ~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~-----~v---~----~~~~~~t~~~~~~~~ 123 (351)
..+.||.+.-+|..|+++|. +|.+.+..+..... +.| ..+|-.- -+ . +.++.+.-..+++..
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~~~----~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~Ey 187 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRLA----ELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEF 187 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHHHH----TTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEEE
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHHHH----Hhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEEEc
Confidence 56899999999999999999 58888877764333 333 1111110 00 0 011122333333333
Q ss_pred cCCC--------------ceEEEe-cCCcccccCCccccch---hhhcCccEEEEccccccCc-----hh----HHHHHH
Q 018696 124 ADGE--------------REFLFF-RHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAE-----PC----RSTQLA 176 (351)
Q Consensus 124 ~~g~--------------~~~~~~-~~~~~~~~~~~~~i~~---~~i~~~~~~~~~~~~~~~~-----~~----~~~~~~ 176 (351)
..|. +++++. +..+.......+.+.. +.-+..|.+.++|+..+.+ .. .+...+
T Consensus 188 ~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e 267 (474)
T 3drw_A 188 RKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKE 267 (474)
T ss_dssp CTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHH
T ss_pred CCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHHH
Confidence 3332 233332 2222201222233321 2223689999999998766 11 223334
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCC
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGG 232 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 232 (351)
.++..+..++++-+...+. .+.+-....+..+++++|.+-+|++|+..+.+.
T Consensus 268 ~i~~l~~~~~~iH~E~As~----~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 268 DIIEFKEKDVKIHVEFASV----QDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHTTCEEEEECCCC----SCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCcc----ccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 5555567899999998754 356666677778999999999999999987653
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=90.40 Aligned_cols=173 Identities=13% Similarity=0.034 Sum_probs=106.5
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
+.++.++++.++.-....+...+. +.+.+++.+.++++|+..... . . .+.+ +..+..++|+||..|+..|
T Consensus 316 ~~~~~~davviGpGlg~~~~~~~~---~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~L 385 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEHVREF---VNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMARL 385 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHHHHHH---HHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHH---HHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHHH
Confidence 456788998887432222211222 222445668999999842110 0 0 1122 1234678999999999999
Q ss_pred cCCCCC---ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCccc
Q 018696 230 TGGDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK 306 (351)
Q Consensus 230 ~~~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~ 306 (351)
+|.... ++ ...++++.+.+- .+|+..|.. .+++++++.+ +........+++|+||+|++.+.+.+++|.+
T Consensus 386 ~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~~-~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~--- 458 (502)
T 3rss_A 386 VKKTVGDVKYN-YELAEEFAKEND-CVLVLKSAT-TIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS--- 458 (502)
T ss_dssp HTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSSS-EEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC---
T ss_pred hCCCccchHHH-HHHHHHHHHHcC-CEEEEeCCC-eEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC---
Confidence 986531 22 445666665432 256667764 4455555443 4444556788999999998888888889999
Q ss_pred chHHHHHHHHHHHHHHhHHhccc--CCCCCCCCHHHHHHHH
Q 018696 307 DENRLREALLFANACGALTVTER--GAIPALPTKEAALKLL 345 (351)
Q Consensus 307 ~~~~~~~a~~~a~~~Aa~~i~~~--g~~~~~~~~~~v~~~l 345 (351)
+.+|+.+|+...+.+-+.. +.. + ....+|.+.+
T Consensus 459 ----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~l 493 (502)
T 3rss_A 459 ----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLI 493 (502)
T ss_dssp ----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHH
Confidence 9999999987766653332 322 2 3566665554
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.53 E-value=4.8e-07 Score=84.29 Aligned_cols=163 Identities=10% Similarity=0.109 Sum_probs=98.2
Q ss_pred ccCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCCCee--e---------cCCCCCeEEEEEEec
Q 018696 58 KAPGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTSGVR--Y---------DSTARTALAFVTLRA 124 (351)
Q Consensus 58 ~~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~~v~--~---------~~~~~t~~~~~~~~~ 124 (351)
.+.||.+..+|..|+.+|.++.+ ++.+|.. +.+.|...+|..-.+. . ....+....+++...
T Consensus 108 ~~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef~ 182 (455)
T 1ua4_A 108 LRMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEFP 182 (455)
T ss_dssp EEEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEEC
T ss_pred cccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEcC
Confidence 38999999999999999999988 7777753 3333432223220000 0 113345555555555
Q ss_pred CCC----------ceEEEecCCcccccCCccccchhhh----cCccEEEEccccccCchh----HHHHHHHHHHHHHcCC
Q 018696 125 DGE----------REFLFFRHPSADMLLCESELDKNLI----KQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESGS 186 (351)
Q Consensus 125 ~g~----------~~~~~~~~~~~~~~~~~~~i~~~~i----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~ 186 (351)
.|+ ++++...+.........+.+. +.+ ..+|.+.++|+..+.+.. .+...+.++.....+.
T Consensus 183 ~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~-~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 183 RGFRVFEFEAPRENRFIGSADDYNTTLFIREEFR-ESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp TTCEETTEECSSCEEEEEECCSSGGGTCCCGGGS-TTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCeecceeccccceeEEecCCCcccCcccHHHH-HHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 554 234333222222222233332 233 459999999998876532 2222222223366789
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
++-++..+.. +.+.....+ .+++++|.+-+|++|+..+..
T Consensus 262 ~iH~ElAs~~----~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 262 PVHLEFAFTP----DEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp CEEEECCCCC----CHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred eEEEEeCCcc----CHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 9999987643 454556666 999999999999999987643
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-05 Score=75.61 Aligned_cols=156 Identities=17% Similarity=0.009 Sum_probs=99.7
Q ss_pred hhhcC-ccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHH
Q 018696 150 NLIKQ-GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEI 226 (351)
Q Consensus 150 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~ 226 (351)
+..+. ++.+.+.--++ .+ .+.+..+.+.+++.+.|+++||..... +. ...+...++++ +.+||.+|..|+
T Consensus 301 e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~~-~r~~~~~~Ll~~~~~~vItpN~~E~ 373 (540)
T 3nl6_A 301 DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---TE-TRLLLNNKLLTFGQFSCIKGNSSEI 373 (540)
T ss_dssp HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---SH-HHHHHHHHHTTSCCCSEEEECHHHH
T ss_pred HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---cc-ccHHHHHHHHhhCCCeEECCCHHHH
Confidence 34555 77776654332 22 677888888899999999999964322 21 12344456666 799999999999
Q ss_pred hhhcCCCC-------------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEec-------------------Cceeeec
Q 018696 227 TFLTGGDD-------------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK-------------------EFKGRVP 274 (351)
Q Consensus 227 ~~l~~~~~-------------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~-------------------~~~~~v~ 274 (351)
..|+|... .++....++++.+..-. +|+-.|+.-. +.++ +..+.++
T Consensus 374 ~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~-vVvlkG~~D~-I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (540)
T 3nl6_A 374 LGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKT-VAVCTGEFDF-IADGTIEGKYSLSKGTNGTSVEDIPCVAVE 451 (540)
T ss_dssp HHHTTC--------------CCHHHHHHHHHHHHHTTS-EEEECSSSEE-EEECCGGGBCCSSSCCSSCCTTSSCEEEEE
T ss_pred HHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCC-EEEEcCCCeE-EECCCccccccccccccccccCCccEEEEC
Confidence 99998542 12333456677664433 4444555444 3344 3445555
Q ss_pred Ccc-cccccCCCCchHHHHHHHHHHHhcC---CcccchHHHHHHHHHHHHH
Q 018696 275 GVK-TKAVDTTGAGDSFVSGILNCLAADQ---NLIKDENRLREALLFANAC 321 (351)
Q Consensus 275 ~~~-~~~vd~tGaGD~f~ag~~~~l~~g~---~~~~~~~~~~~a~~~a~~~ 321 (351)
.-. .-.-.++|.||++.+.+.+.++.+. + +.+|+..|+..
T Consensus 452 ~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 452 AGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp CSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred CCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 444 2334469999999998888888887 5 66776666543
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.7e-05 Score=66.47 Aligned_cols=155 Identities=15% Similarity=0.059 Sum_probs=89.9
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhh-hcCcEEEeCHHHHhhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVSDDEITFL 229 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l 229 (351)
..+.++.+.+.--+ +.+...+.+....+.+++.+.|+++||..... +.-+ .+...+++ .++++|.+|..|...|
T Consensus 53 ~~~~a~al~iNiGt-l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~R-~~~~~~ll~~~~~vIrgN~sEi~~L 127 (265)
T 3hpd_A 53 MIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHCCeEEEECCC-CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHHH-HHHHHHHHhcCCcEEcCCHHHHHHH
Confidence 34445555443221 23444566777888899999999999954321 1111 12222222 3789999999999999
Q ss_pred cCCCC-----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH
Q 018696 230 TGGDD-----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 230 ~~~~~-----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l 298 (351)
.|... .++....++.+.+..-. +|+-.|+.- ++.++++.+.++.-..-.-..+|.||++.+.+.+.+
T Consensus 128 ~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~-vVvlkG~~d-~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~l 205 (265)
T 3hpd_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNT-TVAVTGAVD-YVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFV 205 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHHTTS-EEEEESSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred hcccCCCCCccCccccHHHHHHHHHHHHHHhCC-EEEEeCCCe-EEEcCCEEEEECCCChHhhcCCccchHHHHHHHHHH
Confidence 86321 12233455566553322 444456644 344555666555444344445899999877666666
Q ss_pred HhcCCcccchHHHHHHHHHHHH
Q 018696 299 AADQNLIKDENRLREALLFANA 320 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~ 320 (351)
+++ + +.+|...|+.
T Consensus 206 A~~-~-------~~~Aa~~a~~ 219 (265)
T 3hpd_A 206 AVT-E-------PLKATTSALV 219 (265)
T ss_dssp TTS-C-------HHHHHHHHHH
T ss_pred hcC-C-------hHHHHHHHHH
Confidence 666 4 4556555553
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.2e-05 Score=74.68 Aligned_cols=160 Identities=11% Similarity=0.152 Sum_probs=92.3
Q ss_pred cCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCC----C-eee------cCCCCCeEEEEEEecC
Q 018696 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTS----G-VRY------DSTARTALAFVTLRAD 125 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~----~-v~~------~~~~~t~~~~~~~~~~ 125 (351)
+.||.+.-+|..|+.+|.++.+ ++.+|. ...+.|...+|..- + +.. ..+.+.-..+++....
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~~ 186 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFPR 186 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEECT
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999987 566554 23334431222100 0 000 0011223333333333
Q ss_pred CC----------ceEEEecCC-cccccCCccccc---hhhhcCccEEEEccccccCch---h-HHHHHHHHHHHHHcCCe
Q 018696 126 GE----------REFLFFRHP-SADMLLCESELD---KNLIKQGSIFHYGSISLIAEP---C-RSTQLAAMNLAKESGSI 187 (351)
Q Consensus 126 g~----------~~~~~~~~~-~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~~ 187 (351)
|. ++++...++ +..... .+.+. .+.....|.+.++|+..+.+. . .+...+.++.....+++
T Consensus 187 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 187 NFKVLDFEAPRENRFIGAADDYNPILYV-REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TCEETTEECSSCEEEEEEECSSGGGTCC-CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeecceecCCCCeEEEEcCCCCCCCcc-cHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 32 344333222 222222 22222 123356999999999887651 1 12222333344678899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
+-+...+. .+.+-....+ .+++++|.+-+|++|+..+
T Consensus 266 iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 266 AHLEFAFT----PDEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp EEEECCCC----SSHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred EEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 99998764 3455566677 9999999999999999874
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.08 E-value=4.9e-05 Score=70.76 Aligned_cols=161 Identities=7% Similarity=0.100 Sum_probs=93.5
Q ss_pred cCCChHHHHHHHHHHcCCCeEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCCeEEEEEEecC
Q 018696 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTS-----GVRY------DSTARTALAFVTLRAD 125 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~~--v~~vG~D~~g~~i~~~l~~~gid~~-----~v~~------~~~~~t~~~~~~~~~~ 125 (351)
+.||.+.-+|..|+.+|.++.+ ++.+|. .+.+.|...+|..- .+.. ..+.+.-..+++....
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 9999999999999999999988 666554 23334432222110 0000 0012344444444444
Q ss_pred CC----------ceEEEecCCcccccCCccccc---hhhhcCccEEEEccccccCc-----hhHHH-HHH---HHHHHHH
Q 018696 126 GE----------REFLFFRHPSADMLLCESELD---KNLIKQGSIFHYGSISLIAE-----PCRST-QLA---AMNLAKE 183 (351)
Q Consensus 126 g~----------~~~~~~~~~~~~~~~~~~~i~---~~~i~~~~~~~~~~~~~~~~-----~~~~~-~~~---~~~~a~~ 183 (351)
|. ++++...++........+.+. .+.....|.+.++|+..+.+ ...+. +.+ .++....
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~ 271 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNR 271 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcC
Confidence 43 344433222111111222221 12235699999999987665 21222 222 2333255
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
.++++-+...+. .+.+-....+ .+++++|.+-+|++|+..+
T Consensus 272 ~~~~iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 312 (467)
T 1gc5_A 272 YNVKSHFEFAYT----ANRRVREALV-ELLPKFTSVGLNEVELASI 312 (467)
T ss_dssp TTCEEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred CCCeEEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 789999998764 3555566677 9999999999999999843
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0013 Score=61.87 Aligned_cols=168 Identities=14% Similarity=0.055 Sum_probs=96.2
Q ss_pred cCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCC
Q 018696 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGG 232 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 232 (351)
+.++.+.++.-.-..+ . + +.++++ .+ ++++|..--.. ..+.+.++...||.||..|+..|++.
T Consensus 291 ~~~~a~~iGPGlG~~~-~-~-l~~~l~----~~-p~VlDADaL~~---------~~~~~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 291 NLLSAFALGMGLENIP-K-D-FNRWLE----LA-PCVLDAGVFYH---------KEILQALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp SSCSEEEECTTCSSCC-T-T-HHHHHH----HS-CEEEEGGGGGS---------GGGGTTTTSSEEEECCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCH-H-H-HHHHHh----cC-CEEEECcccCC---------chhhhccCCCEEECCCHHHHHHHhCC
Confidence 5678887765432222 1 2 333332 34 99999632100 01122344568999999999999875
Q ss_pred -----CCCC---hhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCc
Q 018696 233 -----DDHN---DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNL 304 (351)
Q Consensus 233 -----~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~ 304 (351)
...+ +....++++.+.....+|+-.|..-. +..+++.+ +.........+.|.||++++.+.+.+++|.+
T Consensus 354 ~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~v-I~~~~~~~-~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~~- 430 (475)
T 3k5w_A 354 VGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTL-IAHQGQVF-INILGSVALAKAGSGDVLAGLILSLLSQNYT- 430 (475)
T ss_dssp TSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEE-EEETTEEE-EECCCCGGGCSTTHHHHHHHHHHHHHHTTCC-
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCE-EECCCEEE-EECCCCCCCCCCCHHHHHHHHHHHHHHcCCC-
Confidence 2211 22334566665441334444555443 34444443 3333334556899999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHhh
Q 018696 305 IKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 347 (351)
Q Consensus 305 ~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~~ 347 (351)
+.+|+..|...-+.+-+......+ ....||.+.+.+
T Consensus 431 ------~~~Aa~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 431 ------PLDAAINASLAHALASLEFKNNYA-LTPLDLIEKIKQ 466 (475)
T ss_dssp ------HHHHHHHHHHHHHHGGGGCSSTTC-CCHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHhccCCC-cCHHHHHHHhhh
Confidence 888888776554444333211113 467777776653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 351 | ||||
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 3e-53 | |
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 5e-52 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 5e-49 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 1e-45 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 4e-43 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 4e-40 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 8e-40 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 4e-38 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 3e-31 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 7e-31 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 9e-31 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 4e-28 | |
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 2e-27 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 5e-05 | |
| d1lhpa_ | 309 | c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) | 0.004 |
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 176 bits (447), Expect = 3e-53
Identities = 61/331 (18%), Positives = 114/331 (34%), Gaps = 31/331 (9%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
VV FGE+++ P + + +F GGA ANVA ++++G + FV KL ++ G
Sbjct: 6 VVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLG 64
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
A L++ V T + + + ++ R SA + D
Sbjct: 65 DAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWE 124
Query: 151 LIKQGSIFHYGSISLIA--EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREG 208
I G+ + + S + A+ +A E G + ++E A++
Sbjct: 125 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKG-VTVSCDLNYRARLWTKEEAQKV 183
Query: 209 IMSIWDQADIIKVSDDEITFLTGGDDHNDDN------------VVLEKLFHPNLKLLIVT 256
++ + D++ ++++I + G D + E N K + +T
Sbjct: 184 MIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGIT 243
Query: 257 --------EGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308
+ + VD GAGDSF ++ +
Sbjct: 244 LRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD----- 298
Query: 309 NRLREALLFANACGALTVTERGAIPALPTKE 339
++ FA A L T G L +E
Sbjct: 299 --SQKKAEFAAAASCLKHTIPGDFVVLSIEE 327
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 172 bits (436), Expect = 5e-52
Identities = 108/315 (34%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
V G+ +D VP ++ K PGGA ANV V ++RLGG F+G LGDD+ G
Sbjct: 3 VWVIGDASVDLVPEKQN-------SYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAG 55
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
L + ++N VD + +R D+ +A+ V L ADGER F + HP AD S D
Sbjct: 56 RFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADT--YVSPQDLP 113
Query: 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIM 210
+Q F++ SI L P R L +E+G + +D NLR +W + + E I
Sbjct: 114 PFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIA 173
Query: 211 SIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFK 270
A I KVS DE+ + L I++ G+ G T E +
Sbjct: 174 RSAALASICKVSADELCQ---LSGASHWQDARYYLRDLGCDTTIISLGADGALLITAEGE 230
Query: 271 GRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG 330
P + VDTTGAGD+FV G+L L+ D L EA+ ANACGA+ VT +G
Sbjct: 231 FHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCW--DHALLAEAISNANACGAMAVTAKG 288
Query: 331 AIPALPTKEAALKLL 345
A+ ALP + L
Sbjct: 289 AMTALPFPDQLNTFL 303
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 164 bits (416), Expect = 5e-49
Identities = 86/316 (27%), Positives = 124/316 (39%), Gaps = 19/316 (6%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
VV GE L+ VP G L + GGA NVAV ++RLG FVG++G+DE G
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELG 62
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
M+ L+ VD + R G+ ++R SA L D +
Sbjct: 63 AMVEERLRAEGVDLTHFRRAPGFTGLYLREY-LPLGQGRVFYYRKGSAGSALAPGAFDPD 121
Query: 151 LIKQGSIFHYGSISLIA-EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
++ H I+ R+ L AM AK G +S D N R LW EE AR +
Sbjct: 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEE-ARGFL 180
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269
D++ +S++E L G + + +++ G+KG +
Sbjct: 181 ERALPGVDLLFLSEEEAELLFGRVEEALR--------ALSAPEVVLKRGAKGAWAFVDGR 232
Query: 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTER 329
+ +AVD GAGD+F +G L + E L AN GA R
Sbjct: 233 RVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASR 285
Query: 330 GAIPALPTKEAALKLL 345
G P +E LL
Sbjct: 286 GDHEGAPYREDLEVLL 301
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 156 bits (393), Expect = 1e-45
Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 16/317 (5%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
++ GE+LI+F G L F+K G+ AN V + G + K+GDDEFG
Sbjct: 3 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFG 61
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLR--ADGEREFLFFRHPSADMLLCESELD 148
Y L+ VD S ++ D +A T + F+ + E +++R SA L ++D
Sbjct: 62 YNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD 121
Query: 149 KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREG 208
+ +K + H I+ ST A+ A E S S+D N+RL LW +EEA RE
Sbjct: 122 EEYVKSADLVHSSGIT---LAISSTAKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREI 178
Query: 209 IMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE 268
+ + ++D + + + G+ D K F +++++ G KG Y
Sbjct: 179 LKLLSKFHLKFLITDTDDSKIILGESDPDK---AAKAFSDYAEIIVMKLGPKGAIVYYDG 235
Query: 269 FKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTE 328
K G + D TGAGD+ L+ + +AL +A L V
Sbjct: 236 KKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMI 288
Query: 329 RGAIPALPTKEAALKLL 345
RG LPT + L
Sbjct: 289 RGDQENLPTTKDIETFL 305
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 149 bits (376), Expect = 4e-43
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 32/323 (9%)
Query: 31 VVCFGEMLIDFV------PTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84
+V G + D + PT G ++ A GG AN AV R G + AF+
Sbjct: 4 LVVLGSINADHILNLQSFPTPGETVTGNH--YQVAFGGKGANQAVAAGRSGANIAFIACT 61
Query: 85 GDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE 144
GDD G + L +N+D + V T +A + + +GE +A +
Sbjct: 62 GDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPAL 121
Query: 145 SELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEA 204
E + I S S + +AA +A ++ +I++ +P L
Sbjct: 122 VEAQRERIANASALLMQLES-----PLESVMAAAKIAHQNKTIVALNPAPARELP----- 171
Query: 205 AREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNV--VLEKLFHPNLKLLIVTEGSKGC 262
+ DII ++ E LTG ND++ + L ++ +++T GS+G
Sbjct: 172 -----DELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGV 226
Query: 263 RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 322
RVPG + +AVDT AGD+F ++ L ++ L EA+ FA+A
Sbjct: 227 WASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAA 279
Query: 323 ALTVTERGAIPALPTKEAALKLL 345
A+ VT +GA P++P +E L
Sbjct: 280 AIAVTRKGAQPSVPWREEIDAFL 302
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (355), Expect = 4e-40
Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 27/317 (8%)
Query: 31 VVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD 86
VV G + D V + F GG AN V +RLG ++ V K+G
Sbjct: 4 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGK 63
Query: 87 DEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESE 146
D FG LK+N++ T A T A + + +G+ + + + +
Sbjct: 64 DSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLR 123
Query: 147 LDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAR 206
N+I + + +T L A+ +A+ SG ++P +
Sbjct: 124 AAANVISRAKVMVCQLE-----ITPATSLEALTMARRSGVKTLFNPAPAIADL------- 171
Query: 207 EGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVTEGSKGCRY 264
+ +D+ ++ E LTG + + L +++I+T G++GC
Sbjct: 172 --DPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVV 229
Query: 265 YTKEFK--GRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACG 322
++ +P K KAVDTTGAGDSFV + LA NL L + L +N
Sbjct: 230 LSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNL-----SLEDMLNRSNFIA 284
Query: 323 ALTVTERGAIPALPTKE 339
A++V G + P K+
Sbjct: 285 AVSVQAAGTQSSYPYKK 301
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 140 bits (352), Expect = 8e-40
Identities = 42/306 (13%), Positives = 82/306 (26%), Gaps = 37/306 (12%)
Query: 31 VVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFG 90
+ G + D G + A GG A+ S LG + + K ++
Sbjct: 9 ITFIGHVSKDVNVVDGKR--------EIAYGGGVVMGAITSSLLGVKTKVITKCTREDVS 60
Query: 91 YMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN 150
+ L++N V+ ++ T + +D + F + + +
Sbjct: 61 KF--SFLRDNGVEVVFLKSPRTTSIENRYG---SDPDTRESFLISAADPFTESDLAFIE- 114
Query: 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP---LWPSEEAARE 207
G H + + + + LS D + E
Sbjct: 115 ----GEAVHINPLWY-----GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 165
Query: 208 GIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267
D+ KV E LTG +D + + I+
Sbjct: 166 MKEKYLKYLDLFKVDSREAETLTGTNDLRESCR-----IIRSFGAKIILATHASGVIVFD 220
Query: 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVT 327
TG GD+ + L + + + +A FA A ++ +
Sbjct: 221 GNFYEASFRSWSLEGRTGRGDTCTAAFLVG------FVFKKMSIEKATKFAAAVTSVKMR 274
Query: 328 ERGAIP 333
G +
Sbjct: 275 HPGPLR 280
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 136 bits (342), Expect = 4e-38
Identities = 74/327 (22%), Positives = 119/327 (36%), Gaps = 41/327 (12%)
Query: 31 VVCFGEMLIDFV------PTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSS-AFVGK 83
+ G ID V G A PGG AN AV ++++G FV
Sbjct: 5 ISVVGSSNIDIVLKVDHFTKPGETQKAIE--MNVFPGGKGANQAVTVAKIGEKGCRFVTC 62
Query: 84 LGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLC 143
+G+D++ +L ++ + T R F+ + G+ + F +A+ L
Sbjct: 63 IGNDDYSDLLIENYEKLGITGYIRVSLPTGRA---FIEVDKTGQNRIIIFPGANAE--LK 117
Query: 144 ESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEE 203
+ +D N + + I + + I+ +DP +
Sbjct: 118 KELIDWNTLSESDILLLQNEIPFETTLECAKRF--------NGIVIFDPAPAQGINEE-- 167
Query: 204 AAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVL--EKLFHPNLKLLIVTEGSKG 261
I+ D + ++ EI L+ V EK +K +IV G KG
Sbjct: 168 --------IFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKG 219
Query: 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANAC 321
K K P K KAVDTT AGD F L+ +N EA++F A
Sbjct: 220 VLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAA 272
Query: 322 GALTVTERGAIPALPTKEAALKLLHTV 348
A++VT GA ++P +E L +
Sbjct: 273 AAISVTRLGAQSSIPAREEVEAFLKNL 299
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 117 bits (294), Expect = 3e-31
Identities = 49/300 (16%), Positives = 90/300 (30%), Gaps = 19/300 (6%)
Query: 52 EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN-NVDTSGVRYD 110
+ + +PGG NV++ +S+LG S G +G ++ + K + + T+ V +
Sbjct: 30 DLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGYMGKILVEELRKISKLITTNFVYVE 89
Query: 111 STARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPC 170
R + + + F DM + + S S+
Sbjct: 90 GETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVN 149
Query: 171 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230
+ LA+E G + + + +
Sbjct: 150 EGICNELVRLARERGV--------FVFVEQTPRLLERIYEGPEFPNVVKPDLRGNHASFL 201
Query: 231 GGDDHN-DDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKE-FKGRVPGVKTKAVDTTGAGD 288
G D DD V L + ++ +V+ K T+E + GAGD
Sbjct: 202 GVDLKTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGD 261
Query: 289 SFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTV 348
++V+G++ IK E F A + +P EA K
Sbjct: 262 AYVAGMVYY------FIKHGANFLEMAKFGFASALAATRRKEK--YMPDLEAIKKEYDHF 313
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 117 bits (292), Expect = 7e-31
Identities = 60/317 (18%), Positives = 106/317 (33%), Gaps = 28/317 (8%)
Query: 39 IDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLAN 95
ID + + L K PGG NV I LGG G LG G +AN
Sbjct: 11 IDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIAN 69
Query: 96 ILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQG 155
LK+ N+ + R ++A + + E L + + + + + +
Sbjct: 70 ELKKANIPQAFTSIKEETRDSIAIL--HEGNQTEILEAGPTVSPEEISNFLENFDQLIKQ 127
Query: 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ 215
+ S SL + A + S ++ R+ + W
Sbjct: 128 AEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLL--------DTSGDSLRQVLQGPWK- 178
Query: 216 ADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL----KLLIVTEGSKGCRYYTKEFKG 271
+IK + +E+ L G D + ++ + + ++++ G G +
Sbjct: 179 PYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFY 238
Query: 272 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331
RV +A + G+GD+ ++G+ LA D E L + A G ER
Sbjct: 239 RVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT 291
Query: 332 IPALPTKEAALKLLHTV 348
E K L +
Sbjct: 292 --GHVDVENVKKHLMNI 306
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 116 bits (291), Expect = 9e-31
Identities = 56/313 (17%), Positives = 113/313 (36%), Gaps = 28/313 (8%)
Query: 39 IDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLAN 95
ID++ V + +K PGG NV+ + RLG + +G LG G + N
Sbjct: 11 IDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGGF-TGAYVRN 69
Query: 96 ILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQG 155
L++ + S + + R V ++ E E + +++G
Sbjct: 70 ALEKEEIGLSFIEVEGDTRI---NVKIKGKQETELNGTAPLIKKEHVQALLEQLTELEKG 126
Query: 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ 215
+ + S+ ++ + +AKE G+ ++ D + +++
Sbjct: 127 DVLVL-AGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHE---------VLAAKPS 176
Query: 216 ADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPG 275
+ D +++L ++ ++V+ G + + E V
Sbjct: 177 FIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNV 236
Query: 276 VKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPAL 335
+ ++ GAGDS V+G L L ++ L +A+ FA A G+ T G
Sbjct: 237 PSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSDG----F 285
Query: 336 PTKEAALKLLHTV 348
T+E +L +
Sbjct: 286 CTREEVERLQQQL 298
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 110 bits (274), Expect = 4e-28
Identities = 60/356 (16%), Positives = 113/356 (31%), Gaps = 71/356 (19%)
Query: 31 VVCFGEMLIDFVPTV------------GGVSLAEAPAFK-----------KAPGGAPANV 67
V G ++D V V G +LA + PGG+ N
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNS 65
Query: 68 AVGISRL---GGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRA 124
+ +L GS+ ++G +GDD G +L + + + T + T + V +
Sbjct: 66 VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQ-STGVCAVLINE 124
Query: 125 DGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184
+ L D G++ Y + + ++ A
Sbjct: 125 KERTLCTHLGACGSFRLPE----DWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIP 180
Query: 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEK 244
+I + + + E ++ + S+ +I+ +++E L +
Sbjct: 181 NAIFTLNLSA----PFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 236
Query: 245 LFHP---------------------NLKLLIVTEGSKGCRYYTKEFKG-------RVPGV 276
+ KL+++T G + G VP V
Sbjct: 237 TANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVV 296
Query: 277 K-TKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 331
K VDT GAGD+FV G L L+ + +++ ++ NAC + G
Sbjct: 297 AAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGF 345
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (269), Expect = 2e-27
Identities = 49/304 (16%), Positives = 99/304 (32%), Gaps = 28/304 (9%)
Query: 50 LAEAPAFKKAPGGAPANVAVGISRLG----GSSAFVGKLGDDEFGYMLANILKENNVDTS 105
L + + GG+ N + ++ F G +G D+FG +L E +VD
Sbjct: 49 LVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAH 108
Query: 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL 165
+ + D + +L+KN +
Sbjct: 109 YYEQNEQPTGT-CAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGF 167
Query: 166 IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDE 225
+ L + A E+ I + + + + +E +M + DI+ ++ E
Sbjct: 168 FLTVSPESVLKVAHHASENNRIFTLNLSA----PFISQFYKESLMKVMPYVDILFGNETE 223
Query: 226 ITFLTGGDDHNDDNVVL--------EKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV- 276
++ K+ +++I T+G T+ +
Sbjct: 224 AATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLD 283
Query: 277 --KTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA-IP 333
+ + +DT GAGD+FV G L+ L +D+ L E + + ++ + G P
Sbjct: 284 QDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCTFP 336
Query: 334 ALPT 337
P
Sbjct: 337 EKPD 340
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 42.1 bits (98), Expect = 5e-05
Identities = 26/162 (16%), Positives = 48/162 (29%), Gaps = 21/162 (12%)
Query: 199 WPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVL--EKLFHPNLKLLIVT 256
+ A + +DII + E+ L +N + VL +L ++++V
Sbjct: 123 IVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVK 182
Query: 257 EGSKGCRYY----------TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIK 306
++ + + P V G GD +L L
Sbjct: 183 HLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGAT--- 239
Query: 307 DENRLREALLFANAC--GALTVTERGAIPALPTKEAALKLLH 346
L+EAL A + T+ L A ++
Sbjct: 240 ----LQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK 277
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 36.3 bits (83), Expect = 0.004
Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 209
+ + G ++++ + + + L ++ N ++ ++
Sbjct: 75 DYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYR 134
Query: 210 MSIWDQADIIKVSDDEITFLTGGDDHNDDNVV--LEKLFHPNLKLLIVT----------- 256
+ ADII + E LTG H+ + + ++ L +++T
Sbjct: 135 EKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSD 194
Query: 257 ----EGSKGCRYYTKEFKGRVPGVKTKAVDT--TGAGDSFVSGILNCLAADQNLIKDENR 310
GS+ R + ++ VD G GD F + +L K N
Sbjct: 195 YLMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTH------KHPNN 248
Query: 311 LREALLFANA 320
L+ A +
Sbjct: 249 LKVACEKTVS 258
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 99.98 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.67 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.48 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.45 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.43 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.69 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.45 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 98.37 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.12 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 98.02 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.96 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 97.88 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.53 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 84.22 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 80.03 |
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.3e-45 Score=326.73 Aligned_cols=300 Identities=30% Similarity=0.406 Sum_probs=257.2
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
++|+|+|++++|++...++.. .....+..++||+|.|+|.+|++||.+|.++|.+|+|..|+.+++.|++.||++.++.
T Consensus 2 ~~i~viG~~~vD~~~~~~~~~-~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~~~~iG~D~~g~~i~~~l~~~gi~~~~~~ 80 (302)
T d1v19a_ 2 LEVVTAGEPLVALVPQEPGHL-RGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (302)
T ss_dssp CSEEEESCCEEEEEESSSSCG-GGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CeEEEECcceEEEecCCCCce-eecceEEEecCcHHHHHHHHHHHcCCCEEEEEEEcCCcccccchhhhhhcccccchhc
Confidence 579999999999987665432 3456678899999999999999999999999999999999999999999999999887
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccc-cCchhHHHHHHHHHHHHHcCCe
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSI 187 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 187 (351)
..+. .++.+++.+..+|++++.....+.....++.++.....++++++++.+.+.. ..+...+....+++..++.+..
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T d1v19a_ 81 RAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR 159 (302)
T ss_dssp EESS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETHHHHHCHHHHHHHHHHHHHHHTTTCE
T ss_pred cccc-cccccchhhccccccccccccccccchhhccccccHHHHhcccEEeeeccccccchhHHHHHHHHHHHHHhcCCc
Confidence 7765 5566677778889888887766666666677777777899999999877654 3444557778899999999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEec
Q 018696 188 LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTK 267 (351)
Q Consensus 188 v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 267 (351)
+.+|++.+...+ ........+...++.+|++++|++|+....+... +.+...+.+.+|||+|++|++++.+
T Consensus 160 ~~~d~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~~--------~~~~~~~~~~viit~G~~G~~~~~~ 230 (302)
T d1v19a_ 160 VSLDVNYRQTLW-SPEEARGFLERALPGVDLLFLSEEEAELLFGRVE--------EALRALSAPEVVLKRGAKGAWAFVD 230 (302)
T ss_dssp EEEECCCCTTTC-CHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSTT--------HHHHHTCCSEEEEECTTSCEEEEET
T ss_pred cccccchhhhcc-chhhhHHHHHhhhhhccchhhhhhhhhhhhhhhh--------hhhhhccceEEEEecCCCCCccccc
Confidence 999998776544 3445667788889999999999999988776432 2445578899999999999999999
Q ss_pred CceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 268 EFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 268 ~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
++.+++|+++++++|+|||||+|+|||++++++|++ +++|+++|+++|++++++.|+.+++|+++||+++|+
T Consensus 231 ~~~~~~p~~~v~vvDttGAGDaf~a~~~~~~~~g~~-------~~~a~~~a~~~Aa~~v~~~G~~~~~p~~~~i~~~l~ 302 (302)
T d1v19a_ 231 GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK 302 (302)
T ss_dssp TEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHCC-
T ss_pred cccccccccccccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhC
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999875
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=7.8e-44 Score=319.33 Aligned_cols=303 Identities=36% Similarity=0.556 Sum_probs=256.8
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
+|+|||++++|++.... ..+...+||++.|+|.+|++||.+|.++|++|+|.+|+.+++.|++.||+++++..
T Consensus 2 ki~viG~~~~D~i~~~~-------~~~~~~~GG~~~NvA~~l~~lG~~v~~v~~vG~D~~g~~i~~~L~~~gi~~~~v~~ 74 (304)
T d1tyya_ 2 KVWVIGDASVDLVPEKQ-------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRL 74 (304)
T ss_dssp CEEEESCCEEEEEECSS-------SEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEE
T ss_pred eEEEECccEEEEecCCC-------CeEEEccCcHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHhhhccccccccccc
Confidence 69999999999987543 23567899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEE
Q 018696 110 DSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILS 189 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~ 189 (351)
.+..+++.+++..+.++++++..++.......+++.+. ..+...+++++.+..+......+...++++.+++.+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 152 (304)
T d1tyya_ 75 DADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL--PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVL 152 (304)
T ss_dssp CTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC--CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cccccccceeeEeecccccccceecccccccccchhhh--hhhccceEEEEecccccccchHHHHHHHHHHhhhcCceEe
Confidence 99988898888888889888887766666655555544 3456778888888777777778888899999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCc
Q 018696 190 YDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEF 269 (351)
Q Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 269 (351)
+|++.+...|.........+...+...+....+..+............ +.+.+.+.|++.+|+|+|++|++++++++
T Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---a~~~~~~~g~~~vivt~G~~Ga~~~~~~~ 229 (304)
T d1tyya_ 153 FDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQD---ARYYLRDLGCDTTIISLGADGALLITAEG 229 (304)
T ss_dssp EECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGGG---GSSTTGGGTCSCEEEECGGGCEEEESSSC
T ss_pred eccccccccccchhhhhhhhhhcccccccccccccccccccccchHHH---HHHHHHhcccceeeeecccceeeeeccCC
Confidence 999988877777777888888888999999999988887766554433 34566778999999999999999999999
Q ss_pred eeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHHHh
Q 018696 270 KGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 270 ~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~l~ 346 (351)
.+++|+++++++|++||||+|+|||++++++|++. +..++++|+++|+++|++++++.|+.+.+|+.+||++||+
T Consensus 230 ~~~~p~~~v~vvdt~GAGDaf~ag~~~~l~~g~~~--~~~~l~~al~~a~~~As~~v~~~G~~~~~P~~~ev~~~l~ 304 (304)
T d1tyya_ 230 EFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCW--DHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS 304 (304)
T ss_dssp EEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSC--CHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHHHHHHHC
T ss_pred ccccCcccccCCCCCCchHHHHHHHHHHHHhCCCc--cchHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHhhC
Confidence 99999999999999999999999999999999872 4556799999999999999999999999999999999984
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=2.4e-42 Score=310.42 Aligned_cols=302 Identities=28% Similarity=0.448 Sum_probs=244.4
Q ss_pred eEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRY 109 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~ 109 (351)
||++||++++|++...++. ......+..++||.+.|+|.+|++||.+|.++|.+|+|.+|+.+++.|+++||+++++.+
T Consensus 2 ki~~iG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~vG~D~~g~~i~~~L~~~gI~~~~i~~ 80 (308)
T d2dcna1 2 KLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKI 80 (308)
T ss_dssp EEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCEE
T ss_pred EEEEECcceEEEecCCCCc-eeecceeEEecCcHHHHHHHHHHHCCCCEEEEEEeCCcccccccccccccccccccceee
Confidence 7999999999988765443 335566778999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEec--CCCceEEEecCCcccccCCccccchhhhcCccEEEEcccccc-CchhHHHHHHHHHHHHHcCC
Q 018696 110 DSTARTALAFVTLRA--DGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 110 ~~~~~t~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~ 186 (351)
.++.+|+++++..+. +......++...++......++.....+..+++++.+.+... .+... ..+..+.+.+.
T Consensus 81 ~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 156 (308)
T d2dcna1 81 DPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAK----EAVYKAFEIAS 156 (308)
T ss_dssp ETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHH----HHHHHHHHHCS
T ss_pred eecccceEEEEEeccccccccccceeeecccccccccccccccccccceEEEeeccccccccchh----HHHHHHHhhcc
Confidence 999999998876542 233333344456666667777777788899999998876542 33333 33334445556
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEE
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRY 264 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 264 (351)
...+|...+...|..... ...+...+. ..+.+..|++|...+......+. +.+++..+++.++||.|++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~vvvt~G~~G~~~ 231 (308)
T d2dcna1 157 NRSFDTNIRLKLWSAEEA-KREILKLLSKFHLKFLITDTDDSKIILGESDPDK----AAKAFSDYAEIIVMKLGPKGAIV 231 (308)
T ss_dssp SEEEECCCCTTTSCHHHH-HHHHHHHHHHCCEEEEEEEHHHHHHHHSCCCHHH----HHHHHTTTEEEEEEEEETTEEEE
T ss_pred ccccccceeccccchhhh-hhhhhhhccccccccccchhhhhhhhcchhhhhh----hhhhcccceeEEeeccccCceee
Confidence 677888777666643333 333333333 46778899999999887665433 34566778999999999999999
Q ss_pred EecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHHH
Q 018696 265 YTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKL 344 (351)
Q Consensus 265 ~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~~ 344 (351)
+.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+.+|+.++++++
T Consensus 232 ~~~~~~~~~~~~~v~vvDt~GAGDaf~ag~i~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~~~~~~ 304 (308)
T d2dcna1 232 YYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIETF 304 (308)
T ss_dssp EETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred ecCCcccccccceeeecCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCCCcCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred Hhhh
Q 018696 345 LHTV 348 (351)
Q Consensus 345 l~~~ 348 (351)
|+++
T Consensus 305 l~~~ 308 (308)
T d2dcna1 305 LREM 308 (308)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 9975
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.9e-42 Score=310.16 Aligned_cols=291 Identities=26% Similarity=0.362 Sum_probs=246.7
Q ss_pred CceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCC-eEEEeecCCChHHHHHHHHHHHCCC
Q 018696 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGS-SAFVGKLGDDEFGYMLANILKENNV 102 (351)
Q Consensus 28 ~~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~-v~~v~~vG~D~~g~~i~~~l~~~gi 102 (351)
.|+|+|+|++++|++..+++.|.. .+..+..++||++.|+|.+|++||.+ |.++|.+|+|..|+.+++.|++.||
T Consensus 2 ~m~I~ViG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~i~~vG~D~~g~~~~~~l~~~gv 81 (299)
T d1vm7a_ 2 FLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI 81 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE
T ss_pred eeEEEEeCeeeEEEEEEeCCCCCCCcEEeeeeEEEecCCHHHHHHHHHHHcCCCceEEEEeeeccchhHHHHHHHhhhcc
Confidence 478999999999999998888764 35568889999999999999999997 8999999999999999999999999
Q ss_pred CCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHH
Q 018696 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (351)
Q Consensus 103 d~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 182 (351)
++..+ .+.+|+.+.+.++.+|++++..+ ......++.+.++...+...+++++++... .....+...
T Consensus 82 ~~~~~---~~~~t~~~~i~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 148 (299)
T d1vm7a_ 82 TGYIR---VSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQNEIP--------FETTLECAK 148 (299)
T ss_dssp EEEEE---CSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECSSSC--------HHHHHHHHH
T ss_pred ccccc---cccccceeEEEecCCCCeeEecc--CCcchhCCHhHhChhhcccccceeeccccc--------chhhhHhhh
Confidence 87644 35578889999999999988776 455566888888888888999999876531 112345567
Q ss_pred HcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCC--CCChhHHHHHHHhcCCCeEEEEeeCCc
Q 018696 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGD--DHNDDNVVLEKLFHPNLKLLIVTEGSK 260 (351)
Q Consensus 183 ~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--~~~~~~~~~~~l~~~g~~~vvvt~G~~ 260 (351)
+.+.++++++......+ ..+++.+|++++|.+|+....+.. .........+.+.+.+++.+++|.|++
T Consensus 149 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvvt~G~~ 218 (299)
T d1vm7a_ 149 RFNGIVIFDPAPAQGIN----------EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDK 218 (299)
T ss_dssp HCCSEEEECCCSCTTCC----------GGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGGG
T ss_pred hcCceEEEecCcchhhh----------HHHHhhcccccccHHHHHhhhccccccchhhhhhhhhhhcCCCcEEEEeCCCC
Confidence 78899999987544322 345789999999999988765432 223334456778899999999999999
Q ss_pred ceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHH
Q 018696 261 GCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEA 340 (351)
Q Consensus 261 G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~ 340 (351)
|++++.+++.+++|+++++++|+|||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+.+|
T Consensus 219 g~~~~~~~~~~~~~~~~~~vvDttGAGDaf~Ag~i~~l~~g~~-------~~~al~~a~~~aa~~~~~~G~~~~~p~~~e 291 (299)
T d1vm7a_ 219 GVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPAREE 291 (299)
T ss_dssp CEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHHH
T ss_pred ceEEEeccceEEEeeeeeeeECCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCCCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999989999999
Q ss_pred HHHHHhhh
Q 018696 341 ALKLLHTV 348 (351)
Q Consensus 341 v~~~l~~~ 348 (351)
|+++|+++
T Consensus 292 i~~~lk~~ 299 (299)
T d1vm7a_ 292 VEAFLKNL 299 (299)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999875
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-41 Score=304.35 Aligned_cols=296 Identities=26% Similarity=0.383 Sum_probs=242.1
Q ss_pred eEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 30 LVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 30 ~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
+|+|+|++++|+++.+++.|.. .+..+...+||++.|+|++|++||.+|.++|.+|+|..++.+++.+++.|+++.
T Consensus 3 ~IlviG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~v~~~~~vG~d~~~~~~~~~l~~~gi~~~ 82 (306)
T d1rkda_ 3 SLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDIT 82 (306)
T ss_dssp EEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEECT
T ss_pred EEEEEceeeEEEEEeeCCCCCCCceEeeceEEEecCCHHHHHHHHHHHcCCCEEEEEEECCccccchhhhcccccccccc
Confidence 7999999999999999988764 355678899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc--hhhhcCccEEEEccccccCchhHHHHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 183 (351)
++...+...++.+...+..++.+........ .......... .........+.... ....+...........
T Consensus 83 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 155 (306)
T d1rkda_ 83 PVSVIKGESTGVALIFVNGEGENVIGIHAGA--NAALSPALVEAQRERIANASALLMQL-----ESPLESVMAAAKIAHQ 155 (306)
T ss_dssp TEEEETTCCCEEEEEEECTTSCEEEEEECGG--GGGCCHHHHHTTHHHHHHCSEEEECS-----SSCHHHHHHHHHHHHH
T ss_pred ccccccccccccceeeEeecCcceeeeeccc--hhhhhhhhhhhhHhhhhhheeeeecc-----cchhhhhhhHHHHhhh
Confidence 9999999999999998888888877665322 2223222221 11222222222211 2234555566666777
Q ss_pred cCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhH--HHHHHHhcCCCeEEEEeeCCcc
Q 018696 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDN--VVLEKLFHPNLKLLIVTEGSKG 261 (351)
Q Consensus 184 ~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~--~~~~~l~~~g~~~vvvt~G~~G 261 (351)
.+.....++...... +..+++++|++++|.+|+..+++........ ...+.+.+.+++.+++|+|++|
T Consensus 156 ~~~~~~~~~~~~~~~----------~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vivt~G~~g 225 (306)
T d1rkda_ 156 NKTIVALNPAPAREL----------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRG 225 (306)
T ss_dssp TTCEEEECCCSCCCC----------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGGGC
T ss_pred cccccccCchhhhhh----------HHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHHHHhhcCCcEEEEecCCce
Confidence 788888887654332 2456889999999999999999877665432 3355667799999999999999
Q ss_pred eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHH
Q 018696 262 CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAA 341 (351)
Q Consensus 262 ~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v 341 (351)
++++.+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+++|++.|+.+++|+.+||
T Consensus 226 ~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~Ag~l~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev 298 (306)
T d1rkda_ 226 VWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPWREEI 298 (306)
T ss_dssp EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred EEEeecCceEEeCCccCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999999999 9999999999999999999999899999999
Q ss_pred HHHHhhhc
Q 018696 342 LKLLHTVA 349 (351)
Q Consensus 342 ~~~l~~~~ 349 (351)
+++|++.+
T Consensus 299 ~~~l~~~~ 306 (306)
T d1rkda_ 299 DAFLDRQR 306 (306)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99999864
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-40 Score=297.01 Aligned_cols=294 Identities=27% Similarity=0.367 Sum_probs=236.7
Q ss_pred ceEEEEccceeecccCCCCCCCC----CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~ 104 (351)
++|+|+|++++|++...+..|.. .+..+...+||++.|+|++|++||.+|.++|.+|+|..|+.+++.|++.||++
T Consensus 2 ~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~is~vG~D~~g~~i~~~L~~~gi~~ 81 (308)
T d2fv7a1 2 AAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIST 81 (308)
T ss_dssp CSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTEEC
T ss_pred CEEEEEChhheEeEeecCCCCCCCceEeeceEEEecCCHHHHHHHHHHHCCCCEEEEEEeccccccccccchhccccccc
Confidence 36999999999999998887764 34567889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccch--hhhcCccEEEEccccccCchhHHHHHHHHHHHH
Q 018696 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (351)
Q Consensus 105 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 182 (351)
.++...+..+++.+.+.++.++++.+..+.. ....+....+.. .......+..+.. ....+......+.++
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 154 (308)
T d2fv7a1 82 EFTYQTKDAATGTASIIVNNEGQNIIVIVAG--ANLLLNTEDLRAAANVISRAKVMVCQL-----EITPATSLEALTMAR 154 (308)
T ss_dssp TTEEEESSSCCEEEEEEECTTSCEEEEEECG--GGGGCCHHHHHHTHHHHHHCSEEEECS-----SSCHHHHHHHHHHHH
T ss_pred ccccccccccccceEEEEecCCceEEEeeec--chhhhchhhhhhhhhhcccceEEeecc-----ccchHHHHHHHHHhh
Confidence 9999998989999988888899888877633 232343333321 2222333332222 223556777888899
Q ss_pred HcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh--HHHHHHHhcCCCeEEEEeeCCc
Q 018696 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD--NVVLEKLFHPNLKLLIVTEGSK 260 (351)
Q Consensus 183 ~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~--~~~~~~l~~~g~~~vvvt~G~~ 260 (351)
+.+.++++|+......+. .......+++..|..|..........+.. ...++.+++.+++.+++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vivT~G~~ 225 (308)
T d2fv7a1 155 RSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAE 225 (308)
T ss_dssp HTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred hcCceEEecccchhhhhh---------hhHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHHHHHhcCCCEEEEEeccc
Confidence 999999999986655443 12345678899998888877665544332 3446778889999999999999
Q ss_pred ceEEEecC--ceeeecCcccccccCCCCchHHHHHHHHHH--HhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCC
Q 018696 261 GCRYYTKE--FKGRVPGVKTKAVDTTGAGDSFVSGILNCL--AADQNLIKDENRLREALLFANACGALTVTERGAIPALP 336 (351)
Q Consensus 261 G~~~~~~~--~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l--~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~ 336 (351)
|++++.++ ..+++|+++++++|+|||||+|+|||++++ .+|++ +++|+++|+++|++++++.|+.+++|
T Consensus 226 G~~~~~~~~~~~~~~p~~~v~vvDttGAGDaF~ag~~~~l~~~~~~~-------~~~a~~~a~~~aa~~v~~~G~~~~~p 298 (308)
T d2fv7a1 226 GCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQSSYP 298 (308)
T ss_dssp CEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGGGGCC
T ss_pred ceeeecccccceeecccccccccCCCChhHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999754 578899999999999999999999999987 47888 99999999999999999999998899
Q ss_pred CHHHHHHHH
Q 018696 337 TKEAALKLL 345 (351)
Q Consensus 337 ~~~~v~~~l 345 (351)
+++||+++|
T Consensus 299 ~~~ei~~~l 307 (308)
T d2fv7a1 299 YKKDLPLTL 307 (308)
T ss_dssp CGGGSCGGG
T ss_pred CHHHHHHhh
Confidence 999998765
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=1.4e-39 Score=293.47 Aligned_cols=287 Identities=22% Similarity=0.238 Sum_probs=231.5
Q ss_pred cceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCC
Q 018696 36 EMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST 112 (351)
Q Consensus 36 ~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~ 112 (351)
++++|+++.++..+.. +......++||++.|+|.+|++||.++.++|.+|+| .++.+.+.|++.||++.++...+
T Consensus 8 np~vD~~~~vd~~~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vGdd-~~~~i~~~l~~~gi~~~~i~~~~- 85 (313)
T d2f02a1 8 NPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAFTSIKE- 85 (313)
T ss_dssp SCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHHHHHHTTCCBCCEEESS-
T ss_pred ChHHcEEEEeCCccCCCEEEeCeeeecCCCHHHHHHHHHHHCCCCEEEEEEecCc-cHHHHHHHHHhhccCceEEEeec-
Confidence 4569999998877443 356788999999999999999999999999999976 88999999999999999987654
Q ss_pred CCCeEEEEEEecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCC
Q 018696 113 ARTALAFVTLRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (351)
Q Consensus 113 ~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 186 (351)
.|++++.+++.++++.+.. . ...++++++. .+.+.+++++++++.. ......+.+..+++.+++.+.
T Consensus 86 -~t~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T d2f02a1 86 -ETRDSIAILHEGNQTEILE---A--GPTVSPEEISNFLENFDQLIKQAEIVTISGSL-AKGLPSDFYQELVQKAHAQEV 158 (313)
T ss_dssp -CCEEEEEEEETTEEEEEEE---C--CCBCCHHHHHHHHHHHHHHHTTCSEEEEESCC-CBTSCTTHHHHHHHHHHHTTC
T ss_pred -CCceEEEEEeCCCceEEee---c--cccCCHHHHHHHHHHhhhhhcccceEEEeccc-ccccCHHHHHHHHHHHHhcCC
Confidence 4666666666555444432 2 2224444433 3568899999998753 223344677888999999999
Q ss_pred eEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChh----HHHHHHHhcCCCeEEEEeeCCcce
Q 018696 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDD----NVVLEKLFHPNLKLLIVTEGSKGC 262 (351)
Q Consensus 187 ~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~----~~~~~~l~~~g~~~vvvt~G~~G~ 262 (351)
++++|+.. ..... ....+.++|++++|+.|+..+++....+.. ...++++...|++.++||+|++|+
T Consensus 159 ~~~~~~~~--------~~~~~-~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~g~~~vivT~G~~Ga 229 (313)
T d2f02a1 159 KVLLDTSG--------DSLRQ-VLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGA 229 (313)
T ss_dssp EEEEECCT--------HHHHH-HHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSEEEEECGGGCE
T ss_pred ceeecchH--------HHHHH-HhhhcccceEEEehhhhHHHhhccccccchhhHHHHHHHHHHhcCCceeEEecccceE
Confidence 99999852 12222 233466899999999999999987644322 234566777899999999999999
Q ss_pred EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHH
Q 018696 263 RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAAL 342 (351)
Q Consensus 263 ~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~ 342 (351)
+++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|+ ..|+.++++
T Consensus 230 ~~~~~~~~~~~~~~~v~vvDttGAGD~f~ag~i~~l~~g~~-------~~~al~~A~a~aa~~~~~~g~--~~~~~e~~~ 300 (313)
T d2f02a1 230 IAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT--GHVDVENVK 300 (313)
T ss_dssp EEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSS--SCCCHHHHH
T ss_pred EEEeCCceEecccccCCCCCCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCC--CCCCHHHHH
Confidence 99999999999999999999999999999999999999999 999999999999999999996 568999999
Q ss_pred HHHhhhc
Q 018696 343 KLLHTVA 349 (351)
Q Consensus 343 ~~l~~~~ 349 (351)
+++++++
T Consensus 301 ~~~~~~~ 307 (313)
T d2f02a1 301 KHLMNIQ 307 (313)
T ss_dssp HHHTTCE
T ss_pred HHHhcCc
Confidence 9998765
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=1.1e-39 Score=293.29 Aligned_cols=289 Identities=20% Similarity=0.236 Sum_probs=233.7
Q ss_pred ceEEEEccceeecccCCCCCCCC---CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCC
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~ 105 (351)
|-+.|..+++||+++.++++++. ++......+||++.|+|.+|++||.++.++|.+|+| .|+.+++.|++.||+++
T Consensus 1 ~~~~~~~np~iD~~~~v~~~~~g~~~~~~~~~~~~GG~~~N~A~~l~~lG~~~~~ig~vG~D-~g~~i~~~L~~~gi~~~ 79 (306)
T d2abqa1 1 MIYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGGF-TGAYVRNALEKEEIGLS 79 (306)
T ss_dssp CEEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEHH-HHHHHHHHHHHTTCEEC
T ss_pred CEEEEeCchhHeEEEEeCCcCCCCeEEcCeeeecCCCHHHHHHHHHHHcCCCEEEEEEecCc-cHHHHHHHHHhcccccc
Confidence 34678889999999999987653 355667889999999999999999999999999998 79999999999999999
Q ss_pred CeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc-----hhhhcCccEEEEccccccCchhHHHHHHHHHH
Q 018696 106 GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD-----KNLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (351)
Q Consensus 106 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
++...++ |..++...+. ++... . ........+++. ...+..++++++++.. ......+....+++.
T Consensus 80 ~v~~~~~--t~~~i~~~~~--~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 150 (306)
T d2abqa1 80 FIEVEGD--TRINVKIKGK--QETEL-N---GTAPLIKKEHVQALLEQLTELEKGDVLVLAGSV-PQAMPQTIYRSMTQI 150 (306)
T ss_dssp CEEESSC--CEEEEEEESS--SCEEE-B---CCCCCCCHHHHHHHHHHHTTCCTTCEEEEESCC-CTTSCTTHHHHHHHH
T ss_pred cceeeee--eEEEEEEecc--ccccc-c---cccccCCHHHhhhhhhhHhhhccCCEEEEcCcc-ccchHHHHHHHHHHH
Confidence 9987643 5555554332 22222 1 122223333332 2456788999888753 233344677788899
Q ss_pred HHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCCh--hHHHHHHHhcCCCeEEEEeeC
Q 018696 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHND--DNVVLEKLFHPNLKLLIVTEG 258 (351)
Q Consensus 181 a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~--~~~~~~~l~~~g~~~vvvt~G 258 (351)
+++.+.++++|+.. +.........+|++++|+.|+..+++....+. ..+.++++.+.+++.++||+|
T Consensus 151 a~~~~~~~~~d~~~-----------~~~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G 219 (306)
T d2abqa1 151 AKERGAFVAVDTSG-----------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFA 219 (306)
T ss_dssp HHTTTCEEEEECCH-----------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred HHHcCCceeccchh-----------hHHHHHhhhcceeecccccccccccccccccccchhhcccccccccccceeeeec
Confidence 99999999999852 23345567899999999999999998765433 345578888999999999999
Q ss_pred CcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCH
Q 018696 259 SKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTK 338 (351)
Q Consensus 259 ~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~ 338 (351)
++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|. |+.
T Consensus 220 ~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~aa~~~~~~G~----~~~ 288 (306)
T d2abqa1 220 GDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSDGF----CTR 288 (306)
T ss_dssp GGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSC----CCH
T ss_pred ccCcccccccccccccccCCccCCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCC----CCH
Confidence 999999999999999999999999999999999999999999999 999999999999999999873 689
Q ss_pred HHHHHHHhhhc
Q 018696 339 EAALKLLHTVA 349 (351)
Q Consensus 339 ~~v~~~l~~~~ 349 (351)
+++++++++++
T Consensus 289 ~~v~~~~~~~~ 299 (306)
T d2abqa1 289 EEVERLQQQLQ 299 (306)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999999876
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=3e-38 Score=288.88 Aligned_cols=290 Identities=21% Similarity=0.269 Sum_probs=217.4
Q ss_pred CCceEEEEccceeecccCCCC-------CCCC----------------CCCCccccCCChHHHHHHHHHHc---CCCeEE
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLA----------------EAPAFKKAPGGAPANVAVGISRL---GGSSAF 80 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~----------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v~~ 80 (351)
.||+|++||++++|++..++. .++. .....+.++||++.|+|.+|++| |.+|.+
T Consensus 2 ~p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~~ 81 (350)
T d2absa1 2 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 81 (350)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHHhhhccCceEecCcHHHHHHHHHHHhccCCccEEE
Confidence 478999999999999987652 1110 11234567899999999999999 788999
Q ss_pred EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEE
Q 018696 81 VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHY 160 (351)
Q Consensus 81 v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~ 160 (351)
+|.+|+|.+|+.+++.|+++||+++++ +.++.+|+.++++++ ++++.+..+.. ....+...+.....+....+++.
T Consensus 82 ig~vG~D~~G~~i~~~l~~~gv~~~~~-~~~~~~t~~~~v~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
T d2absa1 82 MGAIGDDPRGQVLKELCDKEGLATRFM-VAPGQSTGVCAVLIN-EKERTLCTHLG--ACGSFRLPEDWTTFASGALIFYA 157 (350)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEE-ECTTCCCEEEEEEEE-TTEEEEEEECG--GGGGCCCCTTHHHHTTTCCEEEE
T ss_pred EecCCCChhhHhHHHHHHhcCCccccc-ccccccceEEEEEee-ccCcceEeeec--ccccccccccccccccccccccc
Confidence 999999999999999999999999876 566778999988887 45566666533 33345555555667888889888
Q ss_pred ccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCC----
Q 018696 161 GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHN---- 236 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---- 236 (351)
.+..+. .........+...++..+..+.+|+.... ....+......+++++|++++|++|++.+++.....
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~ 232 (350)
T d2absa1 158 TAYTLT-ATPKNALEVAGYAHGIPNAIFTLNLSAPF----CVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEK 232 (350)
T ss_dssp EGGGGT-TCHHHHHHHHHHHHTSTTCEEEEECCCHH----HHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----
T ss_pred eeeeec-cccchhHHHHHHhhhhccceEEEecchhh----hhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHH
Confidence 876543 33445555566667777888999875311 122345667778899999999999999987643211
Q ss_pred ---------hhHHH---HHHH-----hcCCCeEEEEeeCCcceEEEecCc-------eeeecCccc-ccccCCCCchHHH
Q 018696 237 ---------DDNVV---LEKL-----FHPNLKLLIVTEGSKGCRYYTKEF-------KGRVPGVKT-KAVDTTGAGDSFV 291 (351)
Q Consensus 237 ---------~~~~~---~~~l-----~~~g~~~vvvt~G~~G~~~~~~~~-------~~~v~~~~~-~~vd~tGaGD~f~ 291 (351)
+.... +.++ ...+++.+|+|+|++|++++.++. ...+|+.+. ++||||||||+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~ 312 (350)
T d2absa1 233 TALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFV 312 (350)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHH
T ss_pred HHhhhcchhhHHHHHHHHHHHHHhhhhccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHH
Confidence 00111 1111 135688999999999999987652 223444443 6999999999999
Q ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 292 SGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 292 ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
|||++++++|++ +++|+++|+++|+.+|++.|++
T Consensus 313 ag~l~~ll~g~~-------~~~al~~a~~~Aa~~v~~~Ga~ 346 (350)
T d2absa1 313 GGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 346 (350)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHCCCC-------HHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999 9999999999999999999975
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-38 Score=285.90 Aligned_cols=295 Identities=17% Similarity=0.160 Sum_probs=226.2
Q ss_pred EEEEc-cceeecccCCCCCCCC------CCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCC
Q 018696 31 VVCFG-EMLIDFVPTVGGVSLA------EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (351)
Q Consensus 31 i~v~G-~~~iD~~~~~~~~~~~------~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid 103 (351)
|+.+| ++++|+++.+++.+.. ........+||++.|+|++|++||.+|.+++++|+| +|+.+.+.|++.|++
T Consensus 2 i~t~~lnp~iD~~~~v~~l~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~g~~~~~~L~~~~~~ 80 (319)
T d2ajra1 2 VLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKISKL 80 (319)
T ss_dssp EEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHHCTT
T ss_pred EEEEeCChHHcEEEEECCccCCCceeeeecceeeECCCCHHHHHHHHHHHCCCCEEEEEEecCc-cHHHHHHHHHHhCCC
Confidence 45556 6789999998876432 234567789999999999999999999999999965 899999999998776
Q ss_pred CCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc------hhhhcCccEEEEccccccCchhHHHHHHH
Q 018696 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD------KNLIKQGSIFHYGSISLIAEPCRSTQLAA 177 (351)
Q Consensus 104 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (351)
++...+....+|++++.+++.++++.+.+. .+++. ++..+.+ ...+.+++++++++.. ....+.+.+..+
T Consensus 81 i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~sGs~-~~~~~~~~~~~l 156 (319)
T d2ajra1 81 ITTNFVYVEGETRENIEIIDEKNKTITAIN-FPGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGSI-PPGVNEGICNEL 156 (319)
T ss_dssp EEEEEEEESSCCEEEEEEEETTTTEEEEEE-CCCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESCC-CTTSCTTHHHHH
T ss_pred CCceeEecCCCCceEEEEEECCCCeEEEEe-cCCCc--CCHHHHHHHHHHHHhhcccccEEEEecCC-cccccHHHHHHH
Confidence 665433334478888888877776655543 23222 4443332 2468899999998632 222344678889
Q ss_pred HHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeC-HHHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEE
Q 018696 178 MNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVS-DDEITFLTGGDDH--NDDNVVLEKLFHPNLKLLI 254 (351)
Q Consensus 178 ~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N-~~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vv 254 (351)
++.++++++++++|+. + .....+.+....++++++| +.|++.+++.... ++..+.++.|.+.+. .+|
T Consensus 157 ~~~a~~~~~~v~~D~s--------~-~~~~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~~~~~l~~~~~-~vv 226 (319)
T d2ajra1 157 VRLARERGVFVFVEQT--------P-RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQ-VSV 226 (319)
T ss_dssp HHHHHHTTCEEEEECC--------H-HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHHSS-EEE
T ss_pred HHHHHhcCCcccccch--------h-hHHHHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHHHHhhhhhhcc-eee
Confidence 9999999999999973 2 2334455566788999999 5688888886543 333445677777774 578
Q ss_pred EeeCCcceEEEecCcee-eecCcccccccCCCCchHHHHHHHHHHH-hcCCcccchHHHHHHHHHHHHHHhHHhcccCCC
Q 018696 255 VTEGSKGCRYYTKEFKG-RVPGVKTKAVDTTGAGDSFVSGILNCLA-ADQNLIKDENRLREALLFANACGALTVTERGAI 332 (351)
Q Consensus 255 vt~G~~G~~~~~~~~~~-~v~~~~~~~vd~tGaGD~f~ag~~~~l~-~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~ 332 (351)
||+|.+|++++.+++.+ +.++++++++|||||||+|.|||+++++ +|++ +++|+++|+++|+.++++.|.
T Consensus 227 vt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~i~~~l~~g~~-------~~~a~~~a~a~aa~~~~~~g~- 298 (319)
T d2ajra1 227 VSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASALAATRRKEK- 298 (319)
T ss_dssp EEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHHHHTTSSSC-
T ss_pred eecccceeeeeccCCceEecccccCCCCCCCChHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCC-
Confidence 99999999998776544 4566678999999999999999999976 5999 999999999999999999995
Q ss_pred CCCCCHHHHHHHHhhhc
Q 018696 333 PALPTKEAALKLLHTVA 349 (351)
Q Consensus 333 ~~~~~~~~v~~~l~~~~ 349 (351)
.+|+++++++++++++
T Consensus 299 -~~~~~~~~~~~~~~~~ 314 (319)
T d2ajra1 299 -YMPDLEAIKKEYDHFT 314 (319)
T ss_dssp -CCCCHHHHHTTGGGEE
T ss_pred -CCCCHHHHHHHHhcCc
Confidence 6799999999998765
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-39 Score=292.38 Aligned_cols=294 Identities=20% Similarity=0.280 Sum_probs=224.2
Q ss_pred CCceEEEEccceeecccCCCC-------CCCC-----------------CCCCccccCCChHHHHHHH----HHHcCCCe
Q 018696 27 YDRLVVCFGEMLIDFVPTVGG-------VSLA-----------------EAPAFKKAPGGAPANVAVG----ISRLGGSS 78 (351)
Q Consensus 27 ~~~~i~v~G~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~n~a~~----l~~lG~~v 78 (351)
++..|++||++++|++..++. .++. ....+...+||++.|+|.+ +++||.++
T Consensus 2 ~~~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~~ 81 (342)
T d1bx4a_ 2 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 81 (342)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred CCCEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCceE
Confidence 466799999999999987652 1110 1234567899999997776 67899999
Q ss_pred EEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccc----hhhhcC
Q 018696 79 AFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD----KNLIKQ 154 (351)
Q Consensus 79 ~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~----~~~i~~ 154 (351)
.++|.+|+|.+|+++++.|+++||+++++...+ .+|+.++++++.++++.+..+ ...+.....+... ...++.
T Consensus 82 ~~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~-~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 158 (342)
T d1bx4a_ 82 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNE-QPTGTCAACITGDNRSLIANL--AAANCYKKEKHLDLEKNWMLVEK 158 (342)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEESS-SCCCEEEEEEETTEEEEEEEC--GGGGGCCGGGTTTSHHHHHHHHH
T ss_pred EEEeecCCChhhhhhhhhhhhhcccceeeeeec-ccceEEEEEecCCccceeeec--cccccccchhhhhhhhhHHHHhh
Confidence 999999999999999999999999999887664 477777777777777766654 3333333332221 345788
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCC
Q 018696 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDD 234 (351)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~ 234 (351)
++++++.++.. ....+....+++.+++.+..+.+|+... ...+..+..+..+++++|++++|++|++.+++...
T Consensus 159 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~ 232 (342)
T d1bx4a_ 159 ARVCYIAGFFL--TVSPESVLKVAHHASENNRIFTLNLSAP----FISQFYKESLMKVMPYVDILFGNETEAATFAREQG 232 (342)
T ss_dssp CSEEEEEGGGG--GTCHHHHHHHHHHHHHTTCEEEEECCSH----HHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTT
T ss_pred cccceeccccc--chhHHHHHHHHHHhhhccceeecccccc----cchhccccchhhhhccccEEeecHHHHHHhhCcCC
Confidence 89999887643 3345677778888999999999987521 12234456778889999999999999999987543
Q ss_pred C--ChhHHH---HHHH---hcCCCeEEEEeeCCcceEEEecCceeeecCc---ccccccCCCCchHHHHHHHHHHHhcCC
Q 018696 235 H--NDDNVV---LEKL---FHPNLKLLIVTEGSKGCRYYTKEFKGRVPGV---KTKAVDTTGAGDSFVSGILNCLAADQN 303 (351)
Q Consensus 235 ~--~~~~~~---~~~l---~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~---~~~~vd~tGaGD~f~ag~~~~l~~g~~ 303 (351)
. .+..++ ++.+ ...+...+++|+|++|++++.+++..+++++ .++++|||||||+|+|||++++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~ 312 (342)
T d1bx4a_ 233 FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP 312 (342)
T ss_dssp CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccchhhhhHHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCC
Confidence 2 122222 2222 2457788999999999999988876655544 357999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHhHHhcccCCC-CCCC
Q 018696 304 LIKDENRLREALLFANACGALTVTERGAI-PALP 336 (351)
Q Consensus 304 ~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~-~~~~ 336 (351)
+++|+++|+++|+.+|++.|++ |..|
T Consensus 313 -------~~~a~~~a~~~Aa~~v~~~Ga~~p~~~ 339 (342)
T d1bx4a_ 313 -------LTECIRAGHYAASIIIRRTGCTFPEKP 339 (342)
T ss_dssp -------HHHHHHHHHHHHHHHTTSSSSCCCSSC
T ss_pred -------HHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 9999999999999999999984 4443
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=99.98 E-value=1.9e-32 Score=243.20 Aligned_cols=276 Identities=19% Similarity=0.156 Sum_probs=195.9
Q ss_pred ceEEEEccceeecccCCCCCCCCCCCCccccCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 018696 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (351)
Q Consensus 29 ~~i~v~G~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~ 108 (351)
.+|+++|++++|++.... ..+..+||.+.|+|.++++||.++.++|.+|+|..+. .+.|++.||+++++.
T Consensus 7 ~~i~~vg~~~~d~~~~~~--------~~~~~~GG~~~n~a~~~~~lG~~~~~i~~vG~D~~~~--~~~l~~~gi~~~~i~ 76 (288)
T d1vk4a_ 7 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTREDVSK--FSFLRDNGVEVVFLK 76 (288)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTTGGG--GTTTGGGTCEEEEEE
T ss_pred ceEEEECCceeeEEecCC--------cEEEecCCHHHHHHHHHHHcCCCEEEEEEeCCChHHH--HHHHHHcCCcEEeec
Confidence 469999999999887643 2457899999999999999999999999999998775 478999999998775
Q ss_pred ecCCCCCeEEEEEEecCCCceEEEecCCcccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeE
Q 018696 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (351)
Q Consensus 109 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v 188 (351)
.+.+|.+..++......+..... .....++.+++. ..+++++++.+... .+.. .++++.+++.+.++
T Consensus 77 --~~~~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~ 143 (288)
T d1vk4a_ 77 --SPRTTSIENRYGSDPDTRESFLI---SAADPFTESDLA---FIEGEAVHINPLWY-GEFP----EDLIPVLRRKVMFL 143 (288)
T ss_dssp --CSSCEEEEEEC-----CCEEEEE---ECCCCCCGGGGG---GCCSSEEEECCSST-TSSC----GGGHHHHHHHCSEE
T ss_pred --cCCcceEEEEEecCCCeeEEEee---hhhhcCChhhhh---hhccceEEEchhhh-ccch----HHHHHHHHHhCcce
Confidence 23344444444433344444433 222234444432 23567787766532 2222 34566678888999
Q ss_pred EEcCCCCCC---CCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcCCCCCChhHHHHHHHhcCCCeEEEEeeCCcceEEE
Q 018696 189 SYDPNLRLP---LWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYY 265 (351)
Q Consensus 189 ~~d~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 265 (351)
++|++.... ...........+.++++++|++++|++|++.+++....++ .++.+.+.+.. +|++.|..|+.++
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~~~~~~~---~~~~~~~~~~~-~v~~~g~~~~~~~ 219 (288)
T d1vk4a_ 144 SADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDLRE---SCRIIRSFGAK-IILATHASGVIVF 219 (288)
T ss_dssp EEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCSCHHH---HHHHHHHTTCS-SEEEEETTEEEEE
T ss_pred eeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhhhhhHHH---HHhhhhcccce-eeeccccceeecc
Confidence 999742100 0000000123456788999999999999999988765333 44566666665 5666677777654
Q ss_pred ecCceeeecCcccccccCCCCchHHHHHHHHHHH-hcCCcccchHHHHHHHHHHHHHHhHHhcccCCCCCCCCHHHHHH
Q 018696 266 TKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLA-ADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALK 343 (351)
Q Consensus 266 ~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~-~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~~g~~~~~~~~~~v~~ 343 (351)
.++.++.+.++++++|+|||||+|+|||+++++ +|++ +++|+++|+++|+.++++.|+ ++++|+++
T Consensus 220 -~~~~~~~~~~~~~vvDttGAGDsF~ag~i~~~l~~g~~-------~~~a~~~A~~~Aa~~v~~~Gp----~~~~~~~~ 286 (288)
T d1vk4a_ 220 -DGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGP----LRREDLEA 286 (288)
T ss_dssp -SSSEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSS----CCGGGGGG
T ss_pred -ccccccccCCCCccCCCCCHHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCC----CCHHHHHh
Confidence 566788888899999999999999999999975 7888 999999999999999999984 46777765
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=5.6e-16 Score=135.81 Aligned_cols=166 Identities=16% Similarity=0.088 Sum_probs=123.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHc--CCeEEEcCCCC---CCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKES--GSILSYDPNLR---LPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 228 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~~---~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 228 (351)
++|.+..+.+ .+....+.+.++++..++. +.++++||... ......++......+++++++|+++||..|++.
T Consensus 75 ~~daI~tG~l--~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~ 152 (288)
T d1vi9a_ 75 TCDAVLSGYL--GSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEI 152 (288)
T ss_dssp GCCEEEECCC--SCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCEEEEecc--CChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHH
Confidence 5777766643 2444456677777776653 68899999642 112223444555667899999999999999999
Q ss_pred hcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCcc--------eEEEecCceeee--cCcccccccCCCCchHHHHHHHH
Q 018696 229 LTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSKG--------CRYYTKEFKGRV--PGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 229 l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G--------~~~~~~~~~~~v--~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
|+|.+.. ++..+++++|.+.|++.|+||.+..| .+++.+++.+++ |..+....+++|+||+|.|+|++
T Consensus 153 L~g~~i~~~~~~~~aa~~L~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GtGD~fsa~l~a 232 (288)
T d1vi9a_ 153 LCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLV 232 (288)
T ss_dssp HHTSCCCSHHHHHHHHHHHHHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECCCCTTCCCSCHHHHHHHHHHH
T ss_pred hhccccchhHHHHHHHHHHHhcCCCEEEEEecCccccccCceeEEEEeCCceEEecccccccCCCCCCChhHHHHHHHHH
Confidence 9997644 34456788999999999999976654 245555555444 44456788999999999999999
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHHHhHHhcc
Q 018696 297 CLAADQNLIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+|++|.+ +++|+++|.+.-...++.
T Consensus 233 ~l~~G~~-------l~~A~~~A~~~v~~~l~~ 257 (288)
T d1vi9a_ 233 KLLQGAT-------LQEALEHVTAAVYEIMVT 257 (288)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHh
Confidence 9999999 999999999876655543
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=6.4e-13 Score=114.24 Aligned_cols=164 Identities=18% Similarity=0.118 Sum_probs=119.7
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCC---CCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP---LWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+.+.++.+. +....+.+.++++. ....++++||..... .....+......+.+++.+|++.||..|++.|+
T Consensus 70 ~~daIkiG~l~--s~~~~~~i~~~l~~--~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L~ 145 (258)
T d1ub0a_ 70 PLHAAKTGALG--DAAIVEAVAEAVRR--FGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALL 145 (258)
T ss_dssp CCSEEEECCCC--SHHHHHHHHHHHHH--TTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHH
T ss_pred CccEEEEeccc--cchHHHHHHHHHHH--hccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhhc
Confidence 66888776542 22233334444332 234679999964321 222345566677789999999999999999999
Q ss_pred CCCCCC--hhHHHHHHHhcCCCeEEEEeeCCc----ce-EEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCC
Q 018696 231 GGDDHN--DDNVVLEKLFHPNLKLLIVTEGSK----GC-RYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQN 303 (351)
Q Consensus 231 ~~~~~~--~~~~~~~~l~~~g~~~vvvt~G~~----G~-~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~ 303 (351)
+..... +..+++++|.++|++.|+||.|.. .. +++.+++.+.+..+++...++.|+||+|.+++++.|++|.+
T Consensus 146 g~~~~~~~d~~~aa~~L~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtGd~~asaia~~La~G~~ 225 (258)
T d1ub0a_ 146 GRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRP 225 (258)
T ss_dssp CSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCeEEEeccccccccccceeccCCeEEecccceecCCCCCChHHHHHHHHHHHHHcCCC
Confidence 976543 445678899999999999997643 22 44556677777777777888999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHhHHhcc
Q 018696 304 LIKDENRLREALLFANACGALTVTE 328 (351)
Q Consensus 304 ~~~~~~~~~~a~~~a~~~Aa~~i~~ 328 (351)
+++|++.|......++..
T Consensus 226 -------l~~Av~~A~~~v~~~i~~ 243 (258)
T d1ub0a_ 226 -------LAEAVAEAKAYLTRALKT 243 (258)
T ss_dssp -------HHHHHHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHHHHHHHHh
Confidence 999999999988777754
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.45 E-value=2.5e-13 Score=119.73 Aligned_cols=164 Identities=16% Similarity=0.118 Sum_probs=109.7
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHH--cCCeEEEcCCCCC------CCCCCHHHHHHHHHHhhhcCcEEEeCH
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL------PLWPSEEAAREGIMSIWDQADIIKVSD 223 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~------~~~~~~~~~~~~~~~~l~~~dvl~~N~ 223 (351)
+...|.+..+.+ .+....+.+.++++..+. .+.++++||.... ..+.+.+......+.+++++|++.||.
T Consensus 71 l~~~daI~tG~l--~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp~adiITPN~ 148 (309)
T d1lhpa_ 71 VNQYDYVLTGYT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIITPNQ 148 (309)
T ss_dssp CCCCSEEEECCC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGGGCSEECCCH
T ss_pred ccccCeeeeccc--CCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcCcCcEEeccH
Confidence 446788766643 233344556666666554 3688999997532 123333333333345899999999999
Q ss_pred HHHhhhcCCCCC--ChhHHHHHHHhcCCCeEEEEeeCCc------ceEEEecCc------------eeeecCcccccccC
Q 018696 224 DEITFLTGGDDH--NDDNVVLEKLFHPNLKLLIVTEGSK------GCRYYTKEF------------KGRVPGVKTKAVDT 283 (351)
Q Consensus 224 ~E~~~l~~~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~~~~~------------~~~v~~~~~~~vd~ 283 (351)
.|++.|+|.+.. ++..+++++|.++|++.|+||-|.. +.++....+ .+.++.+.+ ..++
T Consensus 149 ~Ea~~Ltg~~~~~~~~~~~aa~~L~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~ 227 (309)
T d1lhpa_ 149 FEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHKV-DAVF 227 (309)
T ss_dssp HHHHHHHTCCCCSHHHHHHHHHHHHHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEEECC-SSCC
T ss_pred HHHhHHhccccCCHHHHHHHHHHHHhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEeeccc-CCCC
Confidence 999999997754 3445678899999999999997642 222221110 112222222 2467
Q ss_pred CCCchHHHHHHHHHHHhcC-CcccchHHHHHHHHHHHHHHhHH
Q 018696 284 TGAGDSFVSGILNCLAADQ-NLIKDENRLREALLFANACGALT 325 (351)
Q Consensus 284 tGaGD~f~ag~~~~l~~g~-~~~~~~~~~~~a~~~a~~~Aa~~ 325 (351)
+|+||+|+|+|++++++|. + +++|++.|.+.-...
T Consensus 228 ~GtGD~fsa~l~a~l~~g~~~-------L~~A~~~A~~~v~~~ 263 (309)
T d1lhpa_ 228 VGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSAMHHV 263 (309)
T ss_dssp SSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHH
Confidence 9999999999999999885 6 999999998764433
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.43 E-value=2.1e-12 Score=111.36 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=113.7
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHc-CCeEEEcCCCCC---CCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKES-GSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
..+.+.++.+. + .+....+.+..++. ..++++||.... ....+.+......+.+++.+|++.||..|+..|
T Consensus 72 ~~~aIkiG~l~--s---~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~L 146 (266)
T d1jxha_ 72 RIDTTKIGMLA--E---TDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAAL 146 (266)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHH
T ss_pred cCceEEEcccc--h---HHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHH
Confidence 56777776542 2 23333344444443 467899985422 122344455555667999999999999999988
Q ss_pred cCCCCC---ChhHHHHHHHhcCCCeEEEEeeCCcc-----eEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc
Q 018696 230 TGGDDH---NDDNVVLEKLFHPNLKLLIVTEGSKG-----CRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD 301 (351)
Q Consensus 230 ~~~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g 301 (351)
++.... ++...+++.+.+.|++.|++|-|... .+++.+++......++....++.|.||+|.+++++.|++|
T Consensus 147 l~~~~~~~~~~~~~aa~~l~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hGTGc~lasaiaa~La~G 226 (266)
T d1jxha_ 147 LDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRH 226 (266)
T ss_dssp HTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGS
T ss_pred hcCCcccChHHHHHHHHHHHhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccccCCCCCCchHHHHHHHHHHHHcC
Confidence 775433 23345678899999999999976532 2555666666666666777788899999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHhHHhccc
Q 018696 302 QNLIKDENRLREALLFANACGALTVTER 329 (351)
Q Consensus 302 ~~~~~~~~~~~~a~~~a~~~Aa~~i~~~ 329 (351)
.+ +++|++.|......++...
T Consensus 227 ~~-------l~~Av~~A~~~v~~~i~~s 247 (266)
T d1jxha_ 227 RS-------WGETVNEAKAWLSAALAQA 247 (266)
T ss_dssp SS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CC-------HHHHHHHHHHHHHHHHHhC
Confidence 99 9999999999888887653
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=2.4e-07 Score=78.51 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=101.2
Q ss_pred hhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhh--cCcEEEeCHHHHh
Q 018696 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVSDDEIT 227 (351)
Q Consensus 150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 227 (351)
+..+.++.+.+.-- .+.+...+.+....+.+++.+.|+++||..-.. +. ...+...++++ +.+||.+|..|+.
T Consensus 54 e~~~~a~alviN~G-tl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvga---s~-~R~~~~~~ll~~~~~tVI~gN~~Ei~ 128 (269)
T d1ekqa_ 54 DMAKIAGALVLNIG-TLSKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEIA 128 (269)
T ss_dssp HHHHHSSEEEEECT-TCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhccceEEecC-CCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCC---ch-hHHHHHHHHHHhCCCceEcCCHHHHH
Confidence 44555666655332 233445577778889999999999999953221 11 22344455554 5799999999999
Q ss_pred hhcCCCC-----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHH
Q 018696 228 FLTGGDD-----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILN 296 (351)
Q Consensus 228 ~l~~~~~-----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~ 296 (351)
.|.|... .++....++++.++.-..|++ .|+.- ++.++++.+.++.-....-..+|.||++.+.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~d~~~~A~~la~~~~~vVvl-kG~~D-~I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa 206 (269)
T d1ekqa_ 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAI-TGEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (269)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEE-CSSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCccCCcCCcCCcccHHHHHHHHHHHHHhcCCEEEe-cCCce-EEEeCCeeEEecCCChhhccCCcchHHHHHHHHH
Confidence 9988432 122234566666644444555 45543 3455556666654444445568999999999888
Q ss_pred HHHhcCCcccchHHHHHHHHHHHHH
Q 018696 297 CLAADQNLIKDENRLREALLFANAC 321 (351)
Q Consensus 297 ~l~~g~~~~~~~~~~~~a~~~a~~~ 321 (351)
.+..+.+ +.+|+..|...
T Consensus 207 ~la~~~~-------~~~A~~~A~~~ 224 (269)
T d1ekqa_ 207 FCAVEEN-------PLFAAIAAISS 224 (269)
T ss_dssp HHTTCSS-------HHHHHHHHHHH
T ss_pred HHhCCCC-------HHHHHHHHHHH
Confidence 8888988 77777766644
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.45 E-value=2.4e-06 Score=72.03 Aligned_cols=155 Identities=15% Similarity=0.056 Sum_probs=92.7
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHh-hhcCcEEEeCHHHHhhh
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-WDQADIIKVSDDEITFL 229 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~-l~~~dvl~~N~~E~~~l 229 (351)
..+.++.+.+.--+ +.+...+.+....+.+++.+.|+++||..... +..+ .+...++ ..++++|.+|..|+..|
T Consensus 53 ~~~~a~al~iN~Gt-l~~~~~~~m~~a~~~A~~~~~PvVLDPVgvga---s~~R-~~~~~~ll~~~~~vItgN~~Ei~~L 127 (264)
T d1v8aa_ 53 MIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISAL 127 (264)
T ss_dssp HHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHhcCceEeeCCC-CCHHHHHHHHHHHHHHHHcCCCEEEcCcccCc---chhH-HHHHHHHhccCCcEEcCCHHHHHHH
Confidence 34445555443222 23445677788889999999999999953321 2211 2223333 24789999999999999
Q ss_pred cCCCC-----------CChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHH
Q 018696 230 TGGDD-----------HNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCL 298 (351)
Q Consensus 230 ~~~~~-----------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l 298 (351)
.|... .++..+.++.+.+..-. +|+-.|+.-. +.++++.+.++.-....-..+|.||++.+.+.+.+
T Consensus 128 ~g~~~~~~gvd~~~~~~~d~~~~a~~lA~~~~~-vVvlkG~~D~-I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa~l 205 (264)
T d1v8aa_ 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNT-TVAVTGAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFV 205 (264)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHHTTS-EEEEESSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred hCcccCCCCCCcccccHHHHHHHHHHHHHHhCC-EEEecCCeeE-EEcCCEEEEeCCCCchhccCCcccHHHHHHHHHHH
Confidence 86421 12233455666654323 4444576554 45566677766555445566899998766555555
Q ss_pred HhcCCcccchHHHHHHHHHHHH
Q 018696 299 AADQNLIKDENRLREALLFANA 320 (351)
Q Consensus 299 ~~g~~~~~~~~~~~~a~~~a~~ 320 (351)
..+ + ..+++..|..
T Consensus 206 a~~-~-------~~~Aa~~A~~ 219 (264)
T d1v8aa_ 206 AVT-E-------PLKATTSALV 219 (264)
T ss_dssp TTS-C-------HHHHHHHHHH
T ss_pred hcC-C-------HHHHHHHHHH
Confidence 555 4 4456555553
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.37 E-value=6e-06 Score=74.49 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=92.9
Q ss_pred cccCCChHHHHHHHHHHcCCCeE-EEeecCCChHHHHHHHHHHHCCC----------------------CCCCeeecCCC
Q 018696 57 KKAPGGAPANVAVGISRLGGSSA-FVGKLGDDEFGYMLANILKENNV----------------------DTSGVRYDSTA 113 (351)
Q Consensus 57 ~~~~GG~~~n~a~~l~~lG~~v~-~v~~vG~D~~g~~i~~~l~~~gi----------------------d~~~v~~~~~~ 113 (351)
..+.||.+..+|..|+++|.+.. +.+.++.- ...+.|++ ++ +-+.++..=+.
T Consensus 91 ~~r~GGnA~imAn~la~~g~~~vi~~~p~~sk----~~~~lf~~-~i~~P~v~~g~~~~~~p~~a~~~~d~~~iHlIlEy 165 (450)
T d1u2xa_ 91 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPK----RLAELFKK-GVLYPVVENGELQFKPIQEAYREGDPLKINRIFEF 165 (450)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEEECSCCCH----HHHTTSCT-TEEEEEEETTEEEEEEGGGCCCTTCCCCEEEEEEE
T ss_pred ccccCChHHHHHHHHHhcCCceEEEeCCCCcH----HHHHhccc-CccccccccCcccccCchhhcccCCccceEEEEEe
Confidence 45689999999999999998754 44555542 22233322 22 11111111122
Q ss_pred CCeEEEE----EEecCCCceEEEecCCcccc-cCCccccch---hhhcCccEEEEccccccCch-----hHH----HHHH
Q 018696 114 RTALAFV----TLRADGEREFLFFRHPSADM-LLCESELDK---NLIKQGSIFHYGSISLIAEP-----CRS----TQLA 176 (351)
Q Consensus 114 ~t~~~~~----~~~~~g~~~~~~~~~~~~~~-~~~~~~i~~---~~i~~~~~~~~~~~~~~~~~-----~~~----~~~~ 176 (351)
+.+..+- -+.....+++++.++...+. ....+.+.. +.-...|.+.++|+..+.+. ..+ ...+
T Consensus 166 ~~G~~~g~~~~~~~aPraNRfI~s~D~~nn~~l~~~e~f~~~l~~~~~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~ 245 (450)
T d1u2xa_ 166 RKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKE 245 (450)
T ss_dssp CTTCEEEETTEEEECCSCEEEEEEECCGGGGCCSCCTTTGGGHHHHHHTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHH
T ss_pred CCCCeeecCCceEecCCCceEEEecCCcccccccchHHHHHHHHhcccCCCEEEEechhhhhccccCchhHHHHHHHHHH
Confidence 2222221 11112234444443433332 222233321 11135799999999987432 222 2223
Q ss_pred HHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 177 ~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
.+...+..++++-+..++. .+.+-....+..+++++|.+=+|++|+..+.
T Consensus 246 ~l~~~~~~~i~iHlElAs~----~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~ 295 (450)
T d1u2xa_ 246 DIIEFKEKDVKIHVEFASV----QDRKLRKKIITNILPFVDSVGIDEAEIAQIL 295 (450)
T ss_dssp HHHHHHHTTCEEEEECCCC----CCHHHHHHHHHHHGGGSSEEEEEHHHHHHHH
T ss_pred HHHhCCCCCCeEEEEeccc----chHHHHHHHHHHhccccccCCCCHHHHHHHH
Confidence 3444456789999998764 3566667777789999999999999997664
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.12 E-value=1.1e-05 Score=68.47 Aligned_cols=169 Identities=15% Similarity=0.094 Sum_probs=104.0
Q ss_pred hcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhcC
Q 018696 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTG 231 (351)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 231 (351)
.+.++.+.++.-.-.. +...++++...+.+.++++|...-.... ....+...|+.||.-|+..|++
T Consensus 92 ~~~~~~~~iGpGlg~~----~~~~~~~~~l~~~~~p~VlDAdal~~~~----------~~~~~~~~IiTPH~gE~~rL~g 157 (275)
T d1kyha_ 92 EETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAKRT----------YPKREGPVILTPHPGEFFRMTG 157 (275)
T ss_dssp CSCCSEEEECTTCCSS----HHHHHHHHHHTTSSSCEEECGGGCCSCC----------CCCCSSCEEECCCHHHHHHHHC
T ss_pred hhccceEEEeccccch----HHHHHHHHHHhhccCceeehhhhhhhhh----------cccccCceEecccHHHHHHhcC
Confidence 3466777776543222 2334556666777899999985322110 1123456799999999999998
Q ss_pred CCCC---ChhHHHHHHHhcCCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccch
Q 018696 232 GDDH---NDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDE 308 (351)
Q Consensus 232 ~~~~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~~ 308 (351)
.... +.....++++.+..- .++|-.|....+ ...++..++.........+.|.||++.|.+...+++|.+
T Consensus 158 ~~~~~~~~~~~~~a~~~~~~~~-~~vllKG~~t~I-~~~~g~~~~~~~g~~~lat~GsGDvLaGiIa~~lAq~~~----- 230 (275)
T d1kyha_ 158 VPVNELQKKRAEYAKEWAAQLQ-TVIVLKGNQTVI-AFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED----- 230 (275)
T ss_dssp CCHHHHTTSHHHHHHHHHHHHT-SEEEECSTTCEE-ECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-----
T ss_pred cccchhhccHHHHHHHHHHHhC-CeEEeccCcceE-EcCCCceeecCCCCccccCCccccHHHHHHHHHHHcCCC-----
Confidence 6543 222334555554322 256666665554 444434445554445678899999999999999999999
Q ss_pred HHHHHHHHHHHH----HHhHHhcccCCCCCCCCHHHHHHHH
Q 018696 309 NRLREALLFANA----CGALTVTERGAIPALPTKEAALKLL 345 (351)
Q Consensus 309 ~~~~~a~~~a~~----~Aa~~i~~~g~~~~~~~~~~v~~~l 345 (351)
+.+|+..|+. +|-....+.+.. ++ ..+||.+.+
T Consensus 231 --~~~Aa~~a~~lh~~aa~~~~~~~~~~-~~-~asdi~~~i 267 (275)
T d1kyha_ 231 --PKHAVLNAVYLHGACAELWTDEHSAH-TL-LAHELSDIL 267 (275)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHSCGG-GC-CTHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCC-CC-CHHHHHHHH
Confidence 9999999953 333344444432 33 445554444
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=98.02 E-value=0.00014 Score=65.40 Aligned_cols=73 Identities=8% Similarity=0.107 Sum_probs=53.0
Q ss_pred cCccEEEEccccccCchh----HHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhh
Q 018696 153 KQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITF 228 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 228 (351)
...|.+.++|+.+++... ...+.+.++..+..++++-+...+.. + +..+..+.++++++|-|=+|++|+..
T Consensus 221 ~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~~----d-~~~~~~l~~vlp~vdSlGmNEqEL~~ 295 (451)
T d1l2la_ 221 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTP----D-EVVRLEIVKLLKHFYSVGLNEVELAS 295 (451)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCS----S-HHHHHHHHHHGGGCSEEEECHHHHHH
T ss_pred cCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccch----H-HHHHHHHHHhcccCccCCcCHHHHHH
Confidence 468999999998865433 23334445556667899999987532 2 46666677899999999999999875
Q ss_pred hc
Q 018696 229 LT 230 (351)
Q Consensus 229 l~ 230 (351)
+.
T Consensus 296 l~ 297 (451)
T d1l2la_ 296 VV 297 (451)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.96 E-value=0.0002 Score=64.62 Aligned_cols=162 Identities=8% Similarity=0.066 Sum_probs=92.1
Q ss_pred ccccCCChHHHHHHHHHHcCC-CeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecC--------------CCCCeEEEE
Q 018696 56 FKKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDS--------------TARTALAFV 120 (351)
Q Consensus 56 ~~~~~GG~~~n~a~~l~~lG~-~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~--------------~~~t~~~~~ 120 (351)
...+.||.+..+|..|+++|. +|.+.+.++.... .+.+++ +. .++.... +...-..++
T Consensus 114 ~~~rmGGnAgimAn~La~l~~~~vi~~~p~~~k~q----~~lf~~-~~--i~~P~v~~~~~~l~~p~e~~~~e~d~IHlI 186 (467)
T d1gc5a_ 114 DELRIGGQAGIMANLLGGVYRIPTIVHVPQNPKLQ----AELFVD-GP--IYVPVFEGNKLKLVHPKDAIAEEEELIHYI 186 (467)
T ss_dssp SEEEEESHHHHHHHHHHHTSCCCEEECCSCCCHHH----HTTSCS-SS--EEEEEECSSCEEEECGGGSCCSCCCCEEEE
T ss_pred hhcccCCHHHHHHHHHHhcCCceEEEecCcchHHH----HHHhcC-CC--cccceecCCceeecCchhhccCCCCceEEE
Confidence 357789999999999999984 5555555555311 112222 11 1111111 112334455
Q ss_pred EEecCCC----------ceEEEecCCcccccC-Cccccch---hhhcCccEEEEccccccCch-----h----HHHHHHH
Q 018696 121 TLRADGE----------REFLFFRHPSADMLL-CESELDK---NLIKQGSIFHYGSISLIAEP-----C----RSTQLAA 177 (351)
Q Consensus 121 ~~~~~g~----------~~~~~~~~~~~~~~~-~~~~i~~---~~i~~~~~~~~~~~~~~~~~-----~----~~~~~~~ 177 (351)
+....|+ +++++..+. .+..+ ..+.+.. +...+.|.+.++|+.++.+. . .+.+.+.
T Consensus 187 lEY~~G~~wg~~~aPraNRfI~s~D~-~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~~~ 265 (467)
T d1gc5a_ 187 YEFPRGFQVFDVQAPRENRFIANADD-YNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESH 265 (467)
T ss_dssp EEECSSCEETTEECSSCEEEEEECCS-STTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHH
T ss_pred EEeCCCCeecceecCCCCeEEEeCCC-CCccCcccHHHHHHHHhhccCCCEEEEEchhhccccCCCchhHHHHHHHHHHH
Confidence 5444543 344443222 22222 2222221 12246899999999887531 1 2233344
Q ss_pred HHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 178 MNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 178 ~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
+...++.++++-+..++.. + +.....+.++++++|.+=+|++|+..+.
T Consensus 266 l~~l~~~~i~iH~ElAs~~----d-~~l~~~i~~ilp~vDSlGmNEqEL~~l~ 313 (467)
T d1gc5a_ 266 LNILNRYNVKSHFEFAYTA----N-RRVREALVELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HHHHHHTTCEEEEECCCCC----C-HHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred HHhcCcCCCceEEEecchh----h-HHHHHHHHHhccccccCCCCHHHHHHHH
Confidence 4445567899999887532 3 3456666679999999999999987654
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.88 E-value=0.00078 Score=60.44 Aligned_cols=161 Identities=12% Similarity=0.113 Sum_probs=92.0
Q ss_pred cccCCChHHHHHHHHHHcCCCeEEE-eecCCChHHHHHHHHHHHCCCCCCCeee--------------cCCCCCeEEEEE
Q 018696 57 KKAPGGAPANVAVGISRLGGSSAFV-GKLGDDEFGYMLANILKENNVDTSGVRY--------------DSTARTALAFVT 121 (351)
Q Consensus 57 ~~~~GG~~~n~a~~l~~lG~~v~~v-~~vG~D~~g~~i~~~l~~~gid~~~v~~--------------~~~~~t~~~~~~ 121 (351)
..+.||.+..+|..|+++|....++ +.++..... +.+.+ |. .++.. .++.+.-..+++
T Consensus 106 ~~r~GGnAgimAn~la~l~~~~Vi~~~p~~sk~qa----~~f~~-~~--i~~P~~~~~~~~l~~p~e~~~~e~~~IHlIl 178 (454)
T d1ua4a_ 106 ELRMGGQAGIMANLLGGVYGVPVIVHVPQLSRLQA----NLFLD-GP--IYVPTLENGEVKLIHPKEFSGDEENCIHYIY 178 (454)
T ss_dssp EEEEESHHHHHHHHHTTTTCCCEEECCSCCCHHHH----TTSCS-SS--EEEEEEETTEEEEECGGGCSCCCCCCEEEEE
T ss_pred cEecCCHHHHHHHHHHhcCCceEEEecCCchHHHH----HHhcC-CC--cccceeecCceeecCchhhcCCCCcceEEEE
Confidence 5679999999999999999765444 454442111 11221 11 01111 112233344455
Q ss_pred EecCCC----------ceEEEecCCcccccCCccccchh---hhcCccEEEEccccccCchh----HHHHHHHHHHHHHc
Q 018696 122 LRADGE----------REFLFFRHPSADMLLCESELDKN---LIKQGSIFHYGSISLIAEPC----RSTQLAAMNLAKES 184 (351)
Q Consensus 122 ~~~~g~----------~~~~~~~~~~~~~~~~~~~i~~~---~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~ 184 (351)
....|+ +++++..+..-......+.+... ...+.|.+.++|+.+++... .+...+.+...+..
T Consensus 179 EY~~G~~wg~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~ 258 (454)
T d1ua4a_ 179 EFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNER 258 (454)
T ss_dssp EECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCeecceecCCCceEEEeCCCCCccCcccHHHHHHHHHhccCCCEEEEEccccccchhhHHHHHHHHHHHHhcCcc
Confidence 444443 34444333221222222333221 22368899999998775332 22333344455567
Q ss_pred CCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhh
Q 018696 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFL 229 (351)
Q Consensus 185 ~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 229 (351)
++++-+...+.. + +..+..+..+++++|-|=+|++|+..+
T Consensus 259 ~i~IH~ElAs~~----d-~~l~~~i~~vlp~vDSlGmNEqEL~~l 298 (454)
T d1ua4a_ 259 EIPVHLEFAFTP----D-EKVREEILNVLGMFYSVGLNEVELASI 298 (454)
T ss_dssp TCCEEEECCCCC----C-HHHHHHHHHHGGGCSEEEECHHHHHHH
T ss_pred CCceEEEecccc----H-HHHHHHHHHhCCcCCcCCCCHHHHHHH
Confidence 899999987532 3 346666668999999999999998866
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.53 E-value=0.0011 Score=55.85 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=98.5
Q ss_pred hhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCCCHHHHHHHHHHhhhcCcEEEeCHHHHhhhc
Q 018696 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLT 230 (351)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 230 (351)
..+..+.+.++.-.-..+ +....+.+.....+.++++|...-.. . . ...+. ..+..-|+.||.-|++.|+
T Consensus 94 ~~~~~~a~~iGpGlg~~~---~~~~~~~~~~~~~~~~~vldadal~~-~-~----~~~l~-~~~~~~IlTPH~gE~~rL~ 163 (278)
T d2ax3a1 94 LSKDVDVVAIGPGLGNNE---HVREFVNEFLKTLEKPAVIDADAINV-L-D----TSVLK-ERKSPAVLTPHPGEMARLV 163 (278)
T ss_dssp HHHTCSEEEECTTCCCSH---HHHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHHH-TCSSCEEECCCHHHHHHHH
T ss_pred hcccCCEEEecCCcccch---HHHHHHHHHHhccchheecchhhhhh-h-h----hhhhh-hcCCCEEeCCCHhHHHHHh
Confidence 456778887765432222 33333444455667889998621100 0 0 11111 1234568899999999999
Q ss_pred CCCCC--ChhHHHHHHHhc-CCCeEEEEeeCCcceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCCcccc
Q 018696 231 GGDDH--NDDNVVLEKLFH-PNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKD 307 (351)
Q Consensus 231 ~~~~~--~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~vd~tGaGD~f~ag~~~~l~~g~~~~~~ 307 (351)
+.... ++....++.+.+ .++ +|+-.|..- ++..+++.+..+ .......+.|.||++.+.+.+.+++|.+
T Consensus 164 ~~~~~~~~~~~~~a~~~a~~~~~--~vvlKG~~t-~i~~~~~~~~~~-~g~~~la~~GtGDvLaGiIaallAq~~~---- 235 (278)
T d2ax3a1 164 KKTVGDVKYNYELAEEFAKENDC--VLVLKSATT-IVTDGEKTLFNI-TGNTGLSKGGSGDVLTGMIAGFIAQGLS---- 235 (278)
T ss_dssp TCCHHHHTTCHHHHHHHHHHHTS--EEEECSSSE-EEECSSCEEEEC-CCC-CCSSTTHHHHHHHHHHHHHHTTCC----
T ss_pred hcccchhhhHHHHHHHHHHHcCC--cEEecCccc-cccCcccceeec-CCCCccccccchhHHHHHHHHHHHcCCC----
Confidence 86532 112234444443 343 455555543 344444444433 3345567899999999988888899999
Q ss_pred hHHHHHHHHHHHHHHhHH---hcccCCCCCCCCHHHHHHHHh
Q 018696 308 ENRLREALLFANACGALT---VTERGAIPALPTKEAALKLLH 346 (351)
Q Consensus 308 ~~~~~~a~~~a~~~Aa~~---i~~~g~~~~~~~~~~v~~~l~ 346 (351)
+.+|+..|+..-+.+ .++.+ .+ ...++|.+.+.
T Consensus 236 ---~~~A~~~a~~lhg~aa~~a~~~~--~g-~~Asdi~~~ip 271 (278)
T d2ax3a1 236 ---PLEASTVSVYLHGFAAELFEQDE--RG-LTASELLRLIP 271 (278)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCSSCG--GG-CCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCC--CC-cCHHHHHHHHH
Confidence 899998886443333 33322 13 36667666553
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=84.22 E-value=1.5 Score=33.75 Aligned_cols=151 Identities=16% Similarity=0.193 Sum_probs=76.6
Q ss_pred cCCChHHHHHHHHHHcCCCeEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCCcc
Q 018696 59 APGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSA 138 (351)
Q Consensus 59 ~~GG~~~n~a~~l~~lG~~v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~ 138 (351)
-.||.|.|++-.+.+.|.+-.-+-.+-.| .+.|.....+.. +++-.....+ ....+++.+. . .
T Consensus 7 GvGGaG~n~v~~l~~~~~~~v~~iainTD------~~~L~~~~a~~k-i~iG~~~t~G-----~G~g~~p~~g----~-~ 69 (194)
T d1w5fa1 7 GVGGAGNNAINRMIEIGIHGVEFVAVNTD------LQVLEASNADVK-IQIGENITRG-----LGAGGRPEIG----E-Q 69 (194)
T ss_dssp EEHHHHHHHHHHHHHHCCTTEEEEEEESC------HHHHHTCCCSEE-EECCTTTTTT-----SCCTTCHHHH----H-H
T ss_pred EeCchHHHHHHHHHHcCCCceEEEEEcCC------HHHHhcCCcceE-EecccccCCC-----cccccCchhh----H-h
Confidence 47999999999999998763333356677 355665433322 1111110110 0111222211 0 0
Q ss_pred cccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCC--CHHHHHHHHHHhhhcC
Q 018696 139 DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWP--SEEAAREGIMSIWDQA 216 (351)
Q Consensus 139 ~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~--~~~~~~~~~~~~l~~~ 216 (351)
......+.+ .+.++++|.+++..- +....-......+.+.+++.+.+++-=...+..+.. ....+.+.++++-+++
T Consensus 70 aa~e~~~~I-~~~l~~~d~vfi~AG-lGGgTGtgaapviA~~ake~g~lvv~ivtlPF~~EG~~r~~~A~~gl~~L~~~~ 147 (194)
T d1w5fa1 70 AALESEEKI-REVLQDTHMVFITAG-FGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHV 147 (194)
T ss_dssp HHHHTHHHH-HHHTTTCSEEEEEEE-TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH-HHHhcCCCeEEEEEe-cCCCcccchHHHHHHHHHHcCCceEEEEeechhhhHHHHHHHHHHHHHHHHHHh
Confidence 011122222 356888998865432 222333445556788889999875443222111111 1235567888999999
Q ss_pred cEEE-eCHHHHhh
Q 018696 217 DIIK-VSDDEITF 228 (351)
Q Consensus 217 dvl~-~N~~E~~~ 228 (351)
|-++ ++.+.+..
T Consensus 148 D~~Ivi~Nd~L~~ 160 (194)
T d1w5fa1 148 DTLIKISNNKLME 160 (194)
T ss_dssp SEEEEEEHHHHHT
T ss_pred hhhheehHHHHHH
Confidence 9544 33333433
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.03 E-value=2.1 Score=32.94 Aligned_cols=152 Identities=14% Similarity=0.186 Sum_probs=77.6
Q ss_pred ccCCChHHHHHHHHHHcCCC-eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCCeEEEEEEecCCCceEEEecCC
Q 018696 58 KAPGGAPANVAVGISRLGGS-SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHP 136 (351)
Q Consensus 58 ~~~GG~~~n~a~~l~~lG~~-v~~v~~vG~D~~g~~i~~~l~~~gid~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 136 (351)
.-.||.|.|+.-.+.+.|.+ +.++ .+-.| .+.|.....+.. +.+ +.++.. -....+++...
T Consensus 7 iGvGGaG~n~vn~~~~~~~~~v~~i-ainTD------~~~L~~~~~~~k-i~i--G~~~t~---G~Gagg~p~~g----- 68 (198)
T d1rq2a1 7 VGIGGGGVNAVNRMIEQGLKGVEFI-AINTD------AQALLMSDADVK-LDV--GRDSTR---GLGAGADPEVG----- 68 (198)
T ss_dssp EEEHHHHHHHHHHHHHTTCCSEEEE-EEESC------HHHHHHCCCSEE-EEC--CTTTC--------CCCHHHH-----
T ss_pred EEeCchHHHHHHHHHHcCCCCceEE-EEcch------HHHHhcCCcchh-hcc--cccccc---CCCcCcChhhh-----
Confidence 34799999999999999875 5555 46677 345666444332 111 111110 01122222211
Q ss_pred cccccCCccccchhhhcCccEEEEccccccCchhHHHHHHHHHHHHHcCCeEEEcCCCCCCCCC---CHHHHHHHHHHhh
Q 018696 137 SADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWP---SEEAAREGIMSIW 213 (351)
Q Consensus 137 ~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~---~~~~~~~~~~~~l 213 (351)
.....-+.+.+ .+.++++|.+.+..- +....-......+.+.+++.++.++-=...+.. |. ....+.+.++++-
T Consensus 69 ~~aa~e~~~~I-~~~l~~~d~vfi~AG-lGGgTGtGaaPviA~iake~g~l~v~ivt~PF~-~EG~~r~~~A~~gl~~L~ 145 (198)
T d1rq2a1 69 RKAAEDAKDEI-EELLRGADMVFVTAG-EGGGTGTGGAPVVASIARKLGALTVGVVTRPFS-FEGKRRSNQAENGIAALR 145 (198)
T ss_dssp HHHHHHTHHHH-HHHHTTCSEEEEEEE-TTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCG-GGCHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHH-HHHhcCCCEEEEEEe-cCCCCCcchHHHHHHHHHHcCCcEEEEEecChH-HHHHHHHHHHHHHHHHHH
Confidence 00011222333 357889998865332 222223344556778888888775432221111 11 1234557788888
Q ss_pred hcCcEEE-eCHHHHhhhc
Q 018696 214 DQADIIK-VSDDEITFLT 230 (351)
Q Consensus 214 ~~~dvl~-~N~~E~~~l~ 230 (351)
+.+|-++ ++.+.+..+.
T Consensus 146 ~~~D~~Ivi~Nd~L~~~~ 163 (198)
T d1rq2a1 146 ESCDTLIVIPNDRLLQMG 163 (198)
T ss_dssp HHCSEEEEEEHHHHTTSS
T ss_pred HhhCeEEEechhhHHhhc
Confidence 9999444 3344444443
|