Citrus Sinensis ID: 018706

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
Protein Sequence
MCKAQSVNSGLALRGCCLELIRSLSKLHQLSGMASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLKKNKEDGGDDDDDDED
Secondary Structure (PSIPRED)
cccccccccccHHHHHccccEEEEEEEcccccccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEEEcccccccEEEEEEEEEEccccccccEEcEEEEEEEccEEEEEEEccccEEEccccEEEEEEEEEEEHHHHHHHHHccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccccccEEEEEEEEEcccccEEEEEEEEEEcccccccccccEEEEEEEccEEEEEEEccccEEEccccEEEEEEEEEEccccHHHHHHHHHccccEEEEEEEEEEEEcccccEEEEEEEEEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccccHHHccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccEEEEEEEEEEccccccccEEEEEEEEEEcccEEEEcccccccEEcccccEEEEEEEEEcHHHHHHHHHHccccccccEEEEEEEEEEccEEEEEEEEcccccEEEcccccccEEccEEEEEEEccEEEEEEEEEEEccccccccccccEEEEEEcccEEEEEEcccccEEccccEEEEEEEEEEcHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccEEcccccEEEEccccccccccccccc
Coil and Loop (DISEMBL)
mckaqsvnsglaLRGCCLELIRSLSKLhqlsgmassdkpevverdvkekghkeddkeegkggfIEKVKDFIHDIGEKIEetigfgkptadvtavhipkinleRADIVIDVLiknpnpipiplidinylvesdgrklvsglipdsgtihahgeetvkiPVTLIYDDIknayddikpgmiipyKIKVDLIvdvpvfgrltlplekngeipipykpdidlekikferfSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTksakidkngisyidipitfrpkdfgSALWDMIrgkgtgytmkghidvdtpfgamklpiskeggttrlkknkedggdddddded
Flexible Loop (DISEMBL)
mckaqsvnsglaLRGCCLELIRSLSKLhqlsgmassdkpevverdvkekghkeddkeegkggfiekVKDFIHDIGEKIEetigfgkptadVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDsgtihahgeetvkiPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRltlplekngeipipykpDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAEltksakidkngisyidipitfrpkdfgSALWDMIRGKGTGYTMKGHIDVDTPFGAMKlpiskeggttrlkknkedggdddddded
Low Complexity Region (SEG)
MCKAQSVNSGLALRGCCLELIRSLSKLHQLSGMASSDKPEVVERdvkekghkeddkeegkggfiekvkDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVliknpnpipiplidinylVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLKKNKedggdddddded
Disordered region (IsUnstruct)
*********GLALRGCCLELIRSLSK***********************************GFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAM*****************************
Disordered Region (DISOPRED)
************LRGCCLELIRSLSKLHQ**********************************IEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIP****IHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELT*********ISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGG********************
Disordered Region (DISEMBL)
*********GLALRGCCLELIRSLSKLHQL*****************************KGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLK***************
Disordered Region (DISPRO)
*CKAQSVNSGLALRGCCLELIRSLSKLHQLSGMA*S**PEVVERD*KE***********KGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLKK**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCKAQSVNSGLALRGCCLELIRSLSKLHQLSGMASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLKKNKEDGGDDDDDDED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	351	2.2.26 [Sep-21-2011]
P46519	152	Desiccation protectant pr	no	no	0.418	0.967	0.294	4e-15
P46518	151	Late embryogenesis abunda	N/A	no	0.418	0.973	0.313	7e-15
O03983	151	Probable desiccation-rela	no	no	0.410	0.953	0.3	2e-13
O82355	166	Desiccation-related prote	no	no	0.452	0.957	0.290	2e-11
P22241	151	Desiccation-related prote	N/A	no	0.407	0.947	0.312	5e-11

>sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1

 Score = 82.8 bits (203), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 63  FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
            ++K K+++       E+     KP A VT V   +++ +  + +  V + NP   PIP+
Sbjct: 4   LLDKAKNYVA------EKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPI 57

Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYK 182
            +I Y ++S G+++ SG IPD G++ A     + +PV + +  + +   DI     I Y+
Sbjct: 58  CEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQ 117

Query: 183 IKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
           + + L++D+PV G  T+PL + GEI +P   D+
Sbjct: 118 LDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDM 150

Glycine max (taxid: 3847)

>sp|P46518|LEA14_GOSHI Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1

 Score = 82.0 bits (201), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 6/153 (3%)

Query: 63  FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
            +EK KDF+      +++     KP A V+ V +  ++ E  +    V + NP    IP+
Sbjct: 4   LLEKAKDFV------VDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPI 57

Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYK 182
            +I+Y   S GR + SG IPD G++ A     + +PV + Y+ + +   DI     I Y+
Sbjct: 58  CEISYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYE 117

Query: 183 IKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
           +++ L +D+P+ G  T+PL + GEI +P   DI
Sbjct: 118 LELGLTIDLPIVGNFTIPLSQKGEIKLPTLSDI 150

Gossypium hirsutum (taxid: 3635)

>sp|O03983|LEA14_ARATH Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana GN=LEA14 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 6/150 (4%)

Query: 61  GGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPI 120
              ++K KDF+ D      +     KP   VT V +  +N +  + +  V + NP    I
Sbjct: 2   ASLLDKAKDFVAD------KLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSI 55

Query: 121 PLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIP 180
           P+ +I++   S GR++  G IPD G++ A     + IPV + Y  + N   D+     I 
Sbjct: 56  PICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDID 115

Query: 181 YKIKVDLIVDVPVFGRLTLPLEKNGEIPIP 210
           Y++++ L +D+PV G  T+P+   GEI +P
Sbjct: 116 YELQIGLTIDLPVVGEFTIPISSKGEIKLP 145

Arabidopsis thaliana (taxid: 3702)

>sp|O82355|LEA2R_ARATH Desiccation-related protein At2g46140 OS=Arabidopsis thaliana GN=At2g46140 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 20/179 (11%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDK-EEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADV 91
           MAS+D     E+ V+EK        ++ KG F EK+ +                 P A V
Sbjct: 1   MASAD-----EKVVEEKASVISSLLDKAKGFFAEKLANI--------------PTPEATV 41

Query: 92  TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
             V    +  +  D    V +KNP    IP+  I+Y+++S  R + SG IPD G++   G
Sbjct: 42  DDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSG 101

Query: 152 EETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIP 210
              + +PV + Y    +   D+     I Y++ + L  D+PV G +T+P+   GEI +P
Sbjct: 102 TTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLP 160

Arabidopsis thaliana (taxid: 3702)

>sp|P22241|DRPD_CRAPL Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum PE=2 SV=1

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 14/157 (8%)

Query: 63  FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
            + K K+F+ +    +E      KP A V  V +  +       +  + ++NP    IP+
Sbjct: 4   LMNKAKNFVAEKVANVE------KPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPV 57

Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHG----EETVKIPVTLIYDDIKNAYDDIKPGMI 178
            +I Y ++S GR +VSG IPD G++  +     E  +K+P + +   IK    DI   M 
Sbjct: 58  GEIKYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIK----DIGADMD 113

Query: 179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
           I Y +++ L+VD+PV G  T+PL   GE+ +P   DI
Sbjct: 114 IDYVLELGLVVDLPVIGNFTIPLSHKGEMKLPGLSDI 150

Craterostigma plantagineum (taxid: 4153)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
359806904	320	uncharacterized protein LOC100802292 [Gl	0.863	0.946	0.854	1e-148
296084380	400	unnamed protein product [Vitis vinifera]	0.883	0.775	0.810	1e-147
363807896	320	uncharacterized protein LOC100800203 [Gl	0.863	0.946	0.844	1e-147
224095302	315	predicted protein [Populus trichocarpa]	0.863	0.961	0.834	1e-147
118486780	314	unknown [Populus trichocarpa]	0.860	0.961	0.833	1e-146
147853192	317	hypothetical protein VITISV_042205 [Viti	0.863	0.955	0.847	1e-146
225434253	315	PREDICTED: uncharacterized protein LOC10	0.863	0.961	0.847	1e-146
255585293	313	Late embryogenesis abundant protein Lea1	0.863	0.968	0.869	1e-143
359807014	312	desiccation-related protein At2g46140-li	0.880	0.990	0.811	1e-143
388518673	322	unknown [Lotus japonicus]	0.860	0.937	0.828	1e-143

>gi|359806904|ref|NP_001241577.1| uncharacterized protein LOC100802292 [Glycine max] gi|212552204|gb|ACJ31819.1| late-embryogenesis abundant protein 1 [Glycine max] gi|255646815|gb|ACU23879.1| unknown [Glycine max]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/303 (85%), Positives = 281/303 (92%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVT 92
           M++SDKPEVVER  K++ HKEDD+EEGKGGFIEKVKDFIHDIGEKIEE IGFGKPTADVT
Sbjct: 1   MSTSDKPEVVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVT 60

Query: 93  AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGE 152
           A+HIP INL +AD+V+DVLIKNPNP+PIPLIDI+YLV+SD RKLVSGLIPD+GTI AHGE
Sbjct: 61  AIHIPSINLHKADLVVDVLIKNPNPVPIPLIDIDYLVDSDERKLVSGLIPDAGTIGAHGE 120

Query: 153 ETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYK 212
           +TVKIPVTLIYDDIK  Y DIKPG IIPY++KV LI DVP+ GRLTLPLEK GEIPIPYK
Sbjct: 121 QTVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVSLIFDVPILGRLTLPLEKTGEIPIPYK 180

Query: 213 PDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAK 272
           PDIDLEKI FERFSFEET+A LHLKLENKNDFDL LN+LDYEVWL D SIG AELTKSAK
Sbjct: 181 PDIDLEKIHFERFSFEETIATLHLKLENKNDFDLGLNALDYEVWLGDVSIGGAELTKSAK 240

Query: 273 IDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGT 332
           I+K+GISYIDIPITFRPKDFGSALWDMIRG+GTGYTMKGHIDVDTPFGAMKLPISKEGGT
Sbjct: 241 IEKSGISYIDIPITFRPKDFGSALWDMIRGRGTGYTMKGHIDVDTPFGAMKLPISKEGGT 300

Query: 333 TRL 335
           TRL
Sbjct: 301 TRL 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084380|emb|CBI24768.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/328 (81%), Positives = 291/328 (88%), Gaps = 18/328 (5%)

Query: 16  CCLELIRSLSKLHQLSGMASSDKPE-VVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDI 74
           CCL             GM+SSDKPE VVERD KEK    DDK E KGGFIEKVKDFIHDI
Sbjct: 82  CCL-------------GMSSSDKPEEVVERDAKEK----DDKNEEKGGFIEKVKDFIHDI 124

Query: 75  GEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGR 134
           GEKIEE IGFGKPTADVT +HIPKINLERADIVIDVL+ NPNPIPIPL+DI+YL+ESDGR
Sbjct: 125 GEKIEEAIGFGKPTADVTGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGR 184

Query: 135 KLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVF 194
           KLVSGLIPD+GTI+AHG ETVKIPV+LIYDDIKN Y DIKPG IIPYKIKV+LIVDVPVF
Sbjct: 185 KLVSGLIPDAGTINAHGSETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVF 244

Query: 195 GRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYE 254
           GRLTLPLEK GEIPIPYKPDIDLEK++F+ FSFEETVA+LHLKL+NKNDFDL LN LDYE
Sbjct: 245 GRLTLPLEKTGEIPIPYKPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYE 304

Query: 255 VWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHID 314
           VWL+D SIG AEL+KSAKI+KNGIS I++PITFRP++FGSALWDMIRGKGTGYTMKG+ID
Sbjct: 305 VWLADVSIGGAELSKSAKIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNID 364

Query: 315 VDTPFGAMKLPISKEGGTTRLKKNKEDG 342
           VDTPFGAMKLPISKEGG+TRLKK+K  G
Sbjct: 365 VDTPFGAMKLPISKEGGSTRLKKDKGVG 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807896|ref|NP_001242703.1| uncharacterized protein LOC100800203 [Glycine max] gi|255644372|gb|ACU22691.1| unknown [Glycine max]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/303 (84%), Positives = 280/303 (92%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVT 92
           M++SDKPE VER  K++ HKEDD+EEGKGGFIEKVKDFIHDIGEKIEE IGFGKP+ADVT
Sbjct: 1   MSTSDKPEEVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPSADVT 60

Query: 93  AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGE 152
           A+HIP INL +AD+V+DVLIKNPNP+PIPLIDI+YLV+SDGRKLVSGLIPD+GTIHAHGE
Sbjct: 61  AIHIPSINLHKADLVVDVLIKNPNPVPIPLIDIDYLVDSDGRKLVSGLIPDAGTIHAHGE 120

Query: 153 ETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYK 212
           +TVKIPVTLIYDDIK  Y DIKPG IIPY++KV LI DVP+ GRLTLPLEK GEIPIPYK
Sbjct: 121 QTVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVSLIFDVPILGRLTLPLEKTGEIPIPYK 180

Query: 213 PDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAK 272
           PDIDLEKI FERFSFEET+A LHLKLENKNDFDL LN+LDYE WL D SIG AELTKSAK
Sbjct: 181 PDIDLEKIHFERFSFEETIATLHLKLENKNDFDLGLNALDYEAWLGDVSIGGAELTKSAK 240

Query: 273 IDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGT 332
           I+K+GISYIDIPITFRPKDFGSALWDMIRG+GT YT+KGHIDVDTPFGAMKLPISKEGGT
Sbjct: 241 IEKSGISYIDIPITFRPKDFGSALWDMIRGRGTAYTIKGHIDVDTPFGAMKLPISKEGGT 300

Query: 333 TRL 335
           TRL
Sbjct: 301 TRL 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095302|ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|222853276|gb|EEE90823.1| predicted protein [Populus trichocarpa]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/308 (83%), Positives = 285/308 (92%), Gaps = 5/308 (1%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVT 92
           MASSDKPE+V+RDVKE     DDK+E KGGFI+KVKDFI DIGEKIE  IGFGKPTADVT
Sbjct: 1   MASSDKPEIVDRDVKE-----DDKDEEKGGFIDKVKDFIQDIGEKIEGAIGFGKPTADVT 55

Query: 93  AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGE 152
            +H P INLE+A+IV+DVLIKNPNP+PIPLIDINYL+ESDGRKL+SGLIPD+GTI AHGE
Sbjct: 56  EIHFPTINLEKAEIVVDVLIKNPNPVPIPLIDINYLIESDGRKLISGLIPDAGTIRAHGE 115

Query: 153 ETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYK 212
           ETVKIP+ L+YDDIKN YDDIKPG IIPY+IKVD IVDVP+FGRLTLPLEK GEIP+PYK
Sbjct: 116 ETVKIPIHLVYDDIKNTYDDIKPGSIIPYRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYK 175

Query: 213 PDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAK 272
           PDID+EKIKFERFSFEETVA+LHLKLENKNDFDL LNSLDYEVWLS+ SIG AEL +S K
Sbjct: 176 PDIDIEKIKFERFSFEETVAVLHLKLENKNDFDLGLNSLDYEVWLSNVSIGGAELAESTK 235

Query: 273 IDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGT 332
           +DKNGI+Y+DIPITF+PKDFGSALWDMIRGKGTGY+MKGHI+VDTPFGAMKLPISKEGGT
Sbjct: 236 LDKNGINYVDIPITFKPKDFGSALWDMIRGKGTGYSMKGHINVDTPFGAMKLPISKEGGT 295

Query: 333 TRLKKNKE 340
           TRLKK+KE
Sbjct: 296 TRLKKSKE 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486780|gb|ABK95225.1| unknown [Populus trichocarpa]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/307 (83%), Positives = 284/307 (92%), Gaps = 5/307 (1%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVT 92
           MASSDKPE+V+RDVKE     DDK+E KGGFI+KVKDFI DIGEKIE  IGFGKPTADVT
Sbjct: 1   MASSDKPEIVDRDVKE-----DDKDEEKGGFIDKVKDFIQDIGEKIEGAIGFGKPTADVT 55

Query: 93  AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGE 152
            +H P INLE+A+IV+DVLIKNPNP+PIPLIDINYL+ESDGRKL+SGLIPD+GTI AHGE
Sbjct: 56  EIHFPTINLEKAEIVVDVLIKNPNPVPIPLIDINYLIESDGRKLISGLIPDAGTIRAHGE 115

Query: 153 ETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYK 212
           ETVKIP+ L+YDDIKN YDDIKPG IIPY+IKVD IVDVP+FGRLTLPLEK GEIP+PYK
Sbjct: 116 ETVKIPIHLVYDDIKNTYDDIKPGSIIPYRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYK 175

Query: 213 PDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAK 272
           PDID+EKIKFERFSFEETVA+LHLKLENKNDFDL LNSLDYEVWLS+ SIG AEL +S K
Sbjct: 176 PDIDIEKIKFERFSFEETVAVLHLKLENKNDFDLGLNSLDYEVWLSNVSIGGAELAESTK 235

Query: 273 IDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGT 332
           +DKNGI+Y+DIPITF+PKDFGSALWDMIRGKGTGY+MKGHI+VDTPFGAMKLPISKEGGT
Sbjct: 236 LDKNGINYVDIPITFKPKDFGSALWDMIRGKGTGYSMKGHINVDTPFGAMKLPISKEGGT 295

Query: 333 TRLKKNK 339
           TRLKK+K
Sbjct: 296 TRLKKSK 302

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853192|emb|CAN78553.1| hypothetical protein VITISV_042205 [Vitis vinifera]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/308 (84%), Positives = 286/308 (92%), Gaps = 5/308 (1%)

Query: 33  MASSDKPE-VVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADV 91
           M+SSDKPE VVERD KEK    DDK E KGGFIEKVKDFIHDIGEKIEE IGFGKPTADV
Sbjct: 1   MSSSDKPEEVVERDAKEK----DDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 56

Query: 92  TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
           T +HIPKINLERADIVIDVL+ NPNPIPIPL+DI+YL+ESDGRKLVSGLIPD+GTI+AHG
Sbjct: 57  TGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHG 116

Query: 152 EETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPY 211
            ETVKIPV+LIYDDIKN Y DIKPG IIPYKIKV+LIVDVPVFGRLTLPLEK GEIPIPY
Sbjct: 117 SETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPY 176

Query: 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSA 271
           KPDIDLEK++F+ FSFEETVA+LHLKL+NKNDFDL LN LDYEVWL+D SIG AEL+KSA
Sbjct: 177 KPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYEVWLADVSIGGAELSKSA 236

Query: 272 KIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGG 331
           KI+KNGIS I++PITFRP++FGSALWDMIRGKGTGYTMKG+IDVDTPFGAMKLPISKEGG
Sbjct: 237 KIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGG 296

Query: 332 TTRLKKNK 339
           +TRLKK+K
Sbjct: 297 STRLKKDK 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434253|ref|XP_002280489.1| PREDICTED: uncharacterized protein LOC100266227 [Vitis vinifera]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/308 (84%), Positives = 286/308 (92%), Gaps = 5/308 (1%)

Query: 33  MASSDKPE-VVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADV 91
           M+SSDKPE VVERD KEK    DDK E KGGFIEKVKDFIHDIGEKIEE IGFGKPTADV
Sbjct: 1   MSSSDKPEEVVERDAKEK----DDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 56

Query: 92  TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
           T +HIPKINLERADIVIDVL+ NPNPIPIPL+DI+YL+ESDGRKLVSGLIPD+GTI+AHG
Sbjct: 57  TGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHG 116

Query: 152 EETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPY 211
            ETVKIPV+LIYDDIKN Y DIKPG IIPYKIKV+LIVDVPVFGRLTLPLEK GEIPIPY
Sbjct: 117 SETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPY 176

Query: 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSA 271
           KPDIDLEK++F+ FSFEETVA+LHLKL+NKNDFDL LN LDYEVWL+D SIG AEL+KSA
Sbjct: 177 KPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYEVWLADVSIGGAELSKSA 236

Query: 272 KIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGG 331
           KI+KNGIS I++PITFRP++FGSALWDMIRGKGTGYTMKG+IDVDTPFGAMKLPISKEGG
Sbjct: 237 KIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGG 296

Query: 332 TTRLKKNK 339
           +TRLKK+K
Sbjct: 297 STRLKKDK 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585293|ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis] gi|223526810|gb|EEF29030.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/307 (86%), Positives = 286/307 (93%), Gaps = 4/307 (1%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVT 92
           MASSDKPEVV+RDVK+K    DDK+E KGGFI+KVKDFIHDIGEKIEE IGFGKPTADVT
Sbjct: 1   MASSDKPEVVDRDVKDK----DDKDEEKGGFIDKVKDFIHDIGEKIEEAIGFGKPTADVT 56

Query: 93  AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGE 152
            VHIP INLE+ADIV+DVLIKNPNP+PIPL+DINYL+ESDGRKL+SGLIPD+GTI AHGE
Sbjct: 57  GVHIPSINLEKADIVVDVLIKNPNPVPIPLVDINYLIESDGRKLISGLIPDAGTIRAHGE 116

Query: 153 ETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYK 212
           ETVKIPVTLIYDDIKN YDDI+PG IIPY+IKVDLI+DVPVFGRLTLPLEK GEIPIPYK
Sbjct: 117 ETVKIPVTLIYDDIKNTYDDIQPGSIIPYRIKVDLIIDVPVFGRLTLPLEKTGEIPIPYK 176

Query: 213 PDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAK 272
           PDIDLEKI FERFSFEETVA+LH+KLEN NDFDL LN LDYEVWLSD SIG AEL +S K
Sbjct: 177 PDIDLEKIHFERFSFEETVAVLHVKLENMNDFDLGLNGLDYEVWLSDVSIGGAELAESTK 236

Query: 273 IDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGGT 332
           I+K GISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHI+VDTPFGAMKLPISKEGGT
Sbjct: 237 IEKKGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHINVDTPFGAMKLPISKEGGT 296

Query: 333 TRLKKNK 339
           TRLKKNK
Sbjct: 297 TRLKKNK 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807014|ref|NP_001241079.1| desiccation-related protein At2g46140-like [Glycine max] gi|212552206|gb|ACJ31820.1| late-embryogenesis abundant protein 2 [Glycine max] gi|255634580|gb|ACU17652.1| unknown [Glycine max]

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/318 (81%), Positives = 287/318 (90%), Gaps = 9/318 (2%)

Query: 33  MASSDKPEVVERDVKEKGHKEDDK---EEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTA 89
           M++SDK EVVER     G K+D+K   E  KGGF++ VKDFI DIGEKIE  +GFGKPTA
Sbjct: 1   MSTSDKSEVVER-----GAKDDEKPKEEHEKGGFLDTVKDFIQDIGEKIEGAVGFGKPTA 55

Query: 90  DVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHA 149
           DVT +HIP INLE+A++V+DVLIKNPNP+PIPLIDINYLVESDGRKLVSGLIPDSGTIHA
Sbjct: 56  DVTGIHIPSINLEKAELVVDVLIKNPNPVPIPLIDINYLVESDGRKLVSGLIPDSGTIHA 115

Query: 150 HGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPI 209
           HGEETVKIP+TLI+DDI+N YDDIKPG IIPY++KVDLIVDVPVFGRLTLPLEK GEIPI
Sbjct: 116 HGEETVKIPLTLIFDDIRNTYDDIKPGSIIPYRVKVDLIVDVPVFGRLTLPLEKTGEIPI 175

Query: 210 PYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTK 269
           PYKPDIDL+KI+FERFSFEETVAILHLKL+NKNDFDL LN+LDYEVWL D SIG AEL K
Sbjct: 176 PYKPDIDLDKIQFERFSFEETVAILHLKLDNKNDFDLGLNALDYEVWLGDVSIGGAELAK 235

Query: 270 SAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKE 329
           SAK+ K+GIS ID+PITFRPKDFGSALWDMIRG+GTGYT KGHIDVDTPFGAMKLPI+KE
Sbjct: 236 SAKLVKSGISDIDVPITFRPKDFGSALWDMIRGRGTGYTFKGHIDVDTPFGAMKLPITKE 295

Query: 330 GGTTRLKKNKEDGGDDDD 347
           GGTTRLKKN ED GDD++
Sbjct: 296 GGTTRLKKN-EDSGDDEE 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518673|gb|AFK47398.1| unknown [Lotus japonicus]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/304 (82%), Positives = 279/304 (91%), Gaps = 2/304 (0%)

Query: 34  ASSDKPEVVERDV-KEKGHKEDD-KEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADV 91
            S DKPEVVER + K + HKEDD KEEGKGGFIEKVKDFIHDIGEKIEE IGFGKPTADV
Sbjct: 3   TSDDKPEVVERGLFKNEKHKEDDGKEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 62

Query: 92  TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
           + +HIP IN+ + D+V+DVLIKNPNP+PIPLIDINYL+ESDGRKLVSGLIPD+GTIHAHG
Sbjct: 63  SGIHIPSINIHKVDLVVDVLIKNPNPVPIPLIDINYLIESDGRKLVSGLIPDAGTIHAHG 122

Query: 152 EETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPY 211
           EETVKIPVTLIYDDIK  Y DIKPG IIPY++KVDLI DVP+ GRLTLPLEK GEIPIPY
Sbjct: 123 EETVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVDLIFDVPILGRLTLPLEKTGEIPIPY 182

Query: 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSA 271
           KPDID++KI+FE+FSFEET+A LHLKLENKNDFDL LN+LDYEVWL D SIG A+LTKSA
Sbjct: 183 KPDIDVDKIQFEKFSFEETIANLHLKLENKNDFDLGLNALDYEVWLGDVSIGGAQLTKSA 242

Query: 272 KIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTPFGAMKLPISKEGG 331
           K++K+GISYID+PITFRPKDFGSALWDMIRG+GTGYTMKG+IDVDTPFGAMKLPI KEGG
Sbjct: 243 KLEKSGISYIDVPITFRPKDFGSALWDMIRGRGTGYTMKGNIDVDTPFGAMKLPIIKEGG 302

Query: 332 TTRL 335
           TTRL
Sbjct: 303 TTRL 306

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
TAIR|locus:2051749	325	AT2G44060 "AT2G44060" [Arabido	0.766	0.827	0.758	3.9e-108
TAIR|locus:2025346	151	LEA14 "AT1G01470" [Arabidopsis	0.356	0.827	0.28	3.3e-11
TAIR|locus:2062933	166	AT2G46140 "AT2G46140" [Arabido	0.233	0.493	0.317	4.4e-08

TAIR|locus:2051749 AT2G44060 "AT2G44060" [Arabidopsis thaliana (taxid:3702)]

 Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
 Identities = 204/269 (75%), Positives = 228/269 (84%)

Query:    69 DFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXX 128
             DFIHDIGEK+E TIGFGKPTADV+A+HIPKINLERADIV+DV                  
Sbjct:    48 DFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLIDVNYL 107

Query:   129 VESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLI 188
             VESDGRKLVSGLIPD+GT+ AHGEETVKIP+TLIYDDIK+ Y+DI PGMIIPY+IKVDLI
Sbjct:   108 VESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRIKVDLI 167

Query:   189 VDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLAL 248
             VDVPV GRLTLPLEK GEIPIP KPD+D+EKIKF++FS EETVAILH++L+N NDFDL L
Sbjct:   168 VDVPVLGRLTLPLEKCGEIPIPKKPDVDIEKIKFQKFSLEETVAILHVRLQNMNDFDLGL 227

Query:   249 NSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYT 308
             N LD EVWL D SIG AE+  S K+DKNG   I++P+TFRPKDFGSALWDMIRGKGTGYT
Sbjct:   228 NDLDCEVWLCDVSIGKAEIADSIKLDKNGSGLINVPMTFRPKDFGSALWDMIRGKGTGYT 287

Query:   309 MKGHIDVDTPFGAMKLPISKEGGTTRLKK 337
             +KG+IDVDTPFGAMKLPI KEGG TRLKK
Sbjct:   288 IKGNIDVDTPFGAMKLPIIKEGGETRLKK 316

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009269 "response to desiccation" evidence=IEA;ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2025346 LEA14 "AT1G01470" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 35/125 (28%), Positives = 57/125 (45%)

Query:    86 KPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXXVESDGRKLVSGLIPDSG 145
             KP   VT V +  +N +  + +  V                    S GR++  G IPD G
Sbjct:    21 KPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPG 80

Query:   146 TIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNG 205
             ++ A     + IPV + Y  + N   D+     I Y++++ L +D+PV G  T+P+   G
Sbjct:    81 SLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKG 140

Query:   206 EIPIP 210
             EI +P
Sbjct:   141 EIKLP 145

GO:0003674 "molecular_function" evidence=ND

GO:0009269 "response to desiccation" evidence=IEA;ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:0050832 "defense response to fungus" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2062933 AT2G46140 "AT2G46140" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query:   129 VESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLI 188
             ++S  R + SG IPD G++   G   + +PV + Y    +   D+     I Y++ + L 
Sbjct:    79 LKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLT 138

Query:   189 VDVPVFGRLTLPLEKNGEIPIP 210
              D+PV G +T+P+   GEI +P
Sbjct:   139 FDIPVVGDITIPVSTQGEIKLP 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.139   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      351       297   0.00093  115 3  11 22  0.42    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.28u 0.13s 21.41t   Elapsed:  00:00:01
  Total cpu time:  21.28u 0.13s 21.41t   Elapsed:  00:00:01
  Start:  Thu May  9 23:09:41 2013   End:  Thu May  9 23:09:42 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009269 "response to desiccation" evidence=IEA;ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	351
smart00769	100	smart00769, WHy, Water Stress and Hypersensitive r	4e-26
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	2e-24
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	8e-18
smart00769	100	smart00769, WHy, Water Stress and Hypersensitive r	2e-16
COG5608	161	COG5608, COG5608, LEA14-like dessication related p	6e-10
COG5608	161	COG5608, COG5608, LEA14-like dessication related p	6e-07

>gnl|CDD|214812 smart00769, WHy, Water Stress and Hypersensitive response

 Score = 99.6 bits (249), Expect = 4e-26
 Identities = 35/100 (35%), Positives = 55/100 (55%)

Query: 90  DVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHA 149
           DV  V    ++    +IV+ V ++NPNP PIP+  ++Y +  +G +L SG IPDSGT+  
Sbjct: 1   DVVDVEWGPVSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPG 60

Query: 150 HGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIV 189
           +G   + +PVT+     +     I  G  IPY++   L V
Sbjct: 61  NGRTVLDVPVTVNLFLAEALIWHIANGEEIPYRLDGKLTV 100

Length = 100

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 95.1 bits (237), Expect = 2e-24
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 109 DVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKN 168
            + ++NPN  P+P   ++Y +  +G++L SG  P  GT+ A G  T+++PVT+  DD+  
Sbjct: 1   TLRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLAR 60

Query: 169 AY-DDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNG 205
              D +  G+ +PY ++  L V  PV G  T+PL K G
Sbjct: 61  LLKDLLAVGLELPYTLRGRLKVGGPVKGSRTVPLSKEG 98

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 77.4 bits (191), Expect = 8e-18
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 235 HLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGS 294
            L++ N N F L  + L Y++  +   + +    +   +   G + +++P+T    D   
Sbjct: 1   TLRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLAR 60

Query: 295 ALWDMI-RGKGTGYTMKGHIDVDTP-FGAMKLPISKEG 330
            L D++  G    YT++G + V  P  G+  +P+SKEG
Sbjct: 61  LLKDLLAVGLELPYTLRGRLKVGGPVKGSRTVPLSKEG 98

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

>gnl|CDD|214812 smart00769, WHy, Water Stress and Hypersensitive response

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 24/96 (25%), Positives = 51/96 (53%)

Query: 216 DLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDK 275
           D+  +++   S  E   +L +K++N N F + +N L Y+++L+   +G+ E+  S  +  
Sbjct: 1   DVVDVEWGPVSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPG 60

Query: 276 NGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKG 311
           NG + +D+P+T       + +W +  G+   Y + G
Sbjct: 61  NGRTVLDVPVTVNLFLAEALIWHIANGEEIPYRLDG 96

Length = 100

>gnl|CDD|227895 COG5608, COG5608, LEA14-like dessication related protein [Defense mechanisms]

 Score = 57.1 bits (138), Expect = 6e-10
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 2/128 (1%)

Query: 81  TIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGL 140
            I   KP  +       K+     +IV  + I NPNP PIP+  + Y V  +  K+  G 
Sbjct: 27  MIPVKKPGVESMKAKWGKVTNSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGE 86

Query: 141 IPDSGTIHAHGEETVKIPVTLIYDDIKNAY-DDIKPGMIIPYKIKVDLIVDVPVFGRLTL 199
           I    T+  +  ETV +P+ L    IK  +   I+ G     ++++  +V V       +
Sbjct: 87  ILKGTTVPPNSRETVDVPLRLDNSKIKEWWVTHIENGERSTIRVRIKGVVKVGGMDY-EV 145

Query: 200 PLEKNGEI 207
           P++ N   
Sbjct: 146 PIKDNETT 153

Length = 161

>gnl|CDD|227895 COG5608, COG5608, LEA14-like dessication related protein [Defense mechanisms]

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 205 GEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGA 264
             IP+  KP ++  K K+ + +  ET  +  LK+ N N F + +  L Y V+++D  IG 
Sbjct: 26  CMIPVK-KPGVESMKAKWGKVTNSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGE 84

Query: 265 AELTKSAKIDKNGISYIDIPITFR 288
            E+ K   +  N    +D+P+   
Sbjct: 85  GEILKGTTVPPNSRETVDVPLRLD 108

Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	351
COG5608	161	LEA14-like dessication related protein [Defense me	99.87
COG5608	161	LEA14-like dessication related protein [Defense me	99.86
smart00769	100	WHy Water Stress and Hypersensitive response.	99.83
smart00769	100	WHy Water Stress and Hypersensitive response.	99.82
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.51
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.5
PLN03160	219	uncharacterized protein; Provisional	98.25
PLN03160	219	uncharacterized protein; Provisional	98.05
PF12505	125	DUF3712: Protein of unknown function (DUF3712); In	96.32
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	92.14
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	92.09
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	90.88
PF08626	1185	TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC	90.73
PF11906	149	DUF3426: Protein of unknown function (DUF3426); In	89.43
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	89.09

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=99.87  E-value=3.2e-21  Score=166.08  Aligned_cols=122  Identities=29%  Similarity=0.415  Sum_probs=111.1

Q ss_pred             ccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEE
Q 018706           81 TIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVT  160 (351)
Q Consensus        81 ~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~  160 (351)
                      +.-|++|.++.-..+|+.++..+++|...++|+||||||||+.++.|++||||++++.|...++.++|+++.++++++++
T Consensus        27 ~i~~~~p~ve~~ka~wGkvt~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~  106 (161)
T COG5608          27 MIPVKKPGVESMKAKWGKVTNSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLR  106 (161)
T ss_pred             ceEcCCCCceEEEEEEEEEeccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEEE
Confidence            56689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EehhhHHHHH-hccCCCce--eeEEEEEEEEEecccccceeeeeeecc
Q 018706          161 LIYDDIKNAY-DDIKPGMI--IPYKIKVDLIVDVPVFGRLTLPLEKNG  205 (351)
Q Consensus       161 l~~~~L~~~l-~~l~~~e~--i~Y~l~g~l~vd~pilG~~tiP~e~sG  205 (351)
                      +++..+.+|| +||.++++  +.|++++.+  ++.+. .+.+|+...+
T Consensus       107 ~d~~~~ke~w~~hi~ngErs~Ir~~i~~~v--~vg~~-d~eVpi~~~~  151 (161)
T COG5608         107 LDNSKIKEWWVTHIENGERSTIRVRIKGVV--KVGGM-DYEVPIKDNE  151 (161)
T ss_pred             EehHHHHHHHHHHhhccCcccEEEEEEEEE--EEccE-EEEEEEEEcc
Confidence            9999999999 79999998  666666666  44432 4788987766

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=99.86  E-value=4.5e-21  Score=165.16  Aligned_cols=131  Identities=24%  Similarity=0.382  Sum_probs=114.8

Q ss_pred             eeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCe
Q 018706          199 LPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGI  278 (351)
Q Consensus       199 iP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~  278 (351)
                      +|+-.+|-.-...+|.++..+++|++++..++++...++|+|||+||||++++.|++++||+.+|+|.+.++.+|||++.
T Consensus        19 v~~~lS~~~i~~~~p~ve~~ka~wGkvt~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~   98 (161)
T COG5608          19 VPSHLSGCMIPVKKPGVESMKAKWGKVTNSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSR   98 (161)
T ss_pred             hHHHhhCCceEcCCCCceEEEEEEEEEeccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCe
Confidence            34444444444489999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEecccchHHHHHHhh-cCC--CeeEEEEEEEEEccCccceEeeeecccc
Q 018706          279 SYIDIPITFRPKDFGSALWDMI-RGK--GTGYTMKGHIDVDTPFGAMKLPISKEGG  331 (351)
Q Consensus       279 t~i~Vpvtv~~~~~~~~l~~l~-~~~--~i~Y~l~G~l~vd~pfG~~~iP~s~~G~  331 (351)
                      +++++++++++..+..+|..++ ++.  .++|+++|.+.+++.+  ..+|+...++
T Consensus        99 ~tvdv~l~~d~~~~ke~w~~hi~ngErs~Ir~~i~~~v~vg~~d--~eVpi~~~~~  152 (161)
T COG5608          99 ETVDVPLRLDNSKIKEWWVTHIENGERSTIRVRIKGVVKVGGMD--YEVPIKDNET  152 (161)
T ss_pred             EEEEEEEEEehHHHHHHHHHHhhccCcccEEEEEEEEEEEccEE--EEEEEEEccc
Confidence            9999999999999999887555 554  4899999988876554  7899988875

>smart00769 WHy Water Stress and Hypersensitive response

Probab=99.83  E-value=6e-20  Score=150.08  Aligned_cols=99  Identities=24%  Similarity=0.524  Sum_probs=94.9

Q ss_pred             eeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchHHHH
Q 018706          217 LEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSAL  296 (351)
Q Consensus       217 i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~~~l  296 (351)
                      +++++|+++++.++++.++++|+|||+||+++.+++|+|++||..+|+|+..+...||+++++++++|++++...+.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~~~~~~~~   81 (100)
T smart00769        2 VVDVEWGPVSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNLFLAEALI   81 (100)
T ss_pred             cceeEeccccceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeehhHhHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999988888889


Q ss_pred             HHhhcCCCeeEEEEEEEEE
Q 018706          297 WDMIRGKGTGYTMKGHIDV  315 (351)
Q Consensus       297 ~~l~~~~~i~Y~l~G~l~v  315 (351)
                      +++.+++.++|+++|++++
T Consensus        82 ~~l~~~~~~~y~l~g~l~~  100 (100)
T smart00769       82 WHIANGEEIPYRLDGKLTV  100 (100)
T ss_pred             HhhccCCCccEEEEEEECC
Confidence            9999999999999999863

>smart00769 WHy Water Stress and Hypersensitive response

Probab=99.82  E-value=1.4e-19  Score=147.91  Aligned_cols=98  Identities=34%  Similarity=0.515  Sum_probs=94.1

Q ss_pred             EEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHHHH
Q 018706           91 VTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAY  170 (351)
Q Consensus        91 v~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l  170 (351)
                      +.+++|+.+++.+++|.++++|+|||++|+++.+++|+|++||+++++|..++.++|||+|++++++|+++++..+..++
T Consensus         2 ~~~~~~~~~~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~~~~~~~~   81 (100)
T smart00769        2 VVDVEWGPVSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNLFLAEALI   81 (100)
T ss_pred             cceeEeccccceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeehhHhHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999888888888


Q ss_pred             hccCCCceeeEEEEEEEE
Q 018706          171 DDIKPGMIIPYKIKVDLI  188 (351)
Q Consensus       171 ~~l~~~e~i~Y~l~g~l~  188 (351)
                      .|+.+++.++|+++|++.
T Consensus        82 ~~l~~~~~~~y~l~g~l~   99 (100)
T smart00769       82 WHIANGEEIPYRLDGKLT   99 (100)
T ss_pred             HhhccCCCccEEEEEEEC
Confidence            999999999999999984

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.51  E-value=2.6e-13  Score=109.00  Aligned_cols=97  Identities=26%  Similarity=0.441  Sum_probs=85.3

Q ss_pred             EEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccC---CCceeeEEEEE
Q 018706          109 DVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIK---PGMIIPYKIKV  185 (351)
Q Consensus       109 ~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~---~~e~i~Y~l~g  185 (351)
                      ++.|+|||++++++++++|+++++|.+++++...+...+|+++++++.+++.+++..+.+++..+.   ....+.|++++
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l~~~l~~~~~~~~~~~v~~~~~g   80 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDLPRLLKDLLAGRVPFDVTYRIRG   80 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHHHHHHHhhhccccceEEEEEEEE
Confidence            589999999999999999999999999998888889999999999999999999999988885554   67789999999


Q ss_pred             EEE-Eecccccceeeeeeecc
Q 018706          186 DLI-VDVPVFGRLTLPLEKNG  205 (351)
Q Consensus       186 ~l~-vd~pilG~~tiP~e~sG  205 (351)
                      ++. ++.++++..++|++.+|
T Consensus        81 ~~~v~~~~~~~~~~v~~~~~~  101 (101)
T PF03168_consen   81 TFKVLGTPIFGSVRVPVSCEC  101 (101)
T ss_dssp             EEE-EE-TTTSCEEEEEEEEE
T ss_pred             EEEEcccceeeeEEEeEEeEC
Confidence            998 57787788999998764

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.50  E-value=2.1e-13  Score=109.62  Aligned_cols=96  Identities=23%  Similarity=0.498  Sum_probs=86.0

Q ss_pred             EEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchHHHHHHhh---cCCCeeEEEEE
Q 018706          235 HLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMI---RGKGTGYTMKG  311 (351)
Q Consensus       235 ~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~~~l~~l~---~~~~i~Y~l~G  311 (351)
                      +|+|+|||++++.+++++|+++.+|..+|.|...++..+|+++++.+.++++++...+.+.+.++.   ....+.|+++|
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l~~~l~~~~~~~~~~~v~~~~~g   80 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDLPRLLKDLLAGRVPFDVTYRIRG   80 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHHHHHHHhhhccccceEEEEEEEE
Confidence            589999999999999999999999999999999999999999999999999999999999998888   44589999999


Q ss_pred             EEE-EccC-ccceEeeeeccc
Q 018706          312 HID-VDTP-FGAMKLPISKEG  330 (351)
Q Consensus       312 ~l~-vd~p-fG~~~iP~s~~G  330 (351)
                      ++. ++.+ ++..++|++.+|
T Consensus        81 ~~~v~~~~~~~~~~v~~~~~~  101 (101)
T PF03168_consen   81 TFKVLGTPIFGSVRVPVSCEC  101 (101)
T ss_dssp             EEE-EE-TTTSCEEEEEEEEE
T ss_pred             EEEEcccceeeeEEEeEEeEC
Confidence            999 5777 589999999875

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>PLN03160 uncharacterized protein; Provisional

Probab=98.25  E-value=4.1e-05  Score=71.30  Aligned_cols=107  Identities=20%  Similarity=0.294  Sum_probs=79.8

Q ss_pred             CCCeEEEEeEEecccccc---------eeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEE
Q 018706           85 GKPTADVTAVHIPKINLE---------RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETV  155 (351)
Q Consensus        85 ~~P~Vsv~~v~i~~vs~~---------~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v  155 (351)
                      ..|++++.++++..++..         .++|.+++.|+|||..++...+.+-.++-.|..++.+..+ ++.++++++..+
T Consensus        65 k~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p-~g~~~ar~T~~l  143 (219)
T PLN03160         65 KDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTP-PGKAKARRTMRM  143 (219)
T ss_pred             cCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcC-CcccCCCCeEEE
Confidence            789999999999877642         4568888899999999999999999999999999999988 889999987777


Q ss_pred             EEEEEEehhhH---HHHHhccCCCceeeEEEEEEEEEeccc
Q 018706          156 KIPVTLIYDDI---KNAYDDIKPGMIIPYKIKVDLIVDVPV  193 (351)
Q Consensus       156 ~vpv~l~~~~L---~~~l~~l~~~e~i~Y~l~g~l~vd~pi  193 (351)
                      ...+.+....+   ..+..++. ++.+++.....+...+.+
T Consensus       144 ~~tv~~~~~~~~~~~~L~~D~~-~G~v~l~~~~~v~gkVkv  183 (219)
T PLN03160        144 NVTVDIIPDKILSVPGLLTDIS-SGLLNMNSYTRIGGKVKI  183 (219)
T ss_pred             EEEEEEEeceeccchhHHHHhh-CCeEEEEEEEEEEEEEEE
Confidence            76665555443   23334433 445666555555444433

>PLN03160 uncharacterized protein; Provisional

Probab=98.05  E-value=0.00012  Score=68.20  Aligned_cols=82  Identities=11%  Similarity=0.254  Sum_probs=68.2

Q ss_pred             CCCCceeeeeeeEEeeccc---------ceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEE
Q 018706          210 PYKPDIDLEKIKFERFSFE---------ETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISY  280 (351)
Q Consensus       210 p~~P~v~i~~v~~~~vs~~---------~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~  280 (351)
                      |..|.++++++++..+++.         .+++.+.+++.|||...+...+.+-.++-.|..+|+|.++ ++.+++.+++.
T Consensus        64 Pk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p-~g~~~ar~T~~  142 (219)
T PLN03160         64 VKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTP-PGKAKARRTMR  142 (219)
T ss_pred             ccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcC-CcccCCCCeEE
Confidence            7899999999999887753         2457777899999999999999999999999999999986 47799998888


Q ss_pred             EEEEEEecccch
Q 018706          281 IDIPITFRPKDF  292 (351)
Q Consensus       281 i~Vpvtv~~~~~  292 (351)
                      +.+.+.+....+
T Consensus       143 l~~tv~~~~~~~  154 (219)
T PLN03160        143 MNVTVDIIPDKI  154 (219)
T ss_pred             EEEEEEEEecee
Confidence            887776654443

>PF12505 DUF3712: Protein of unknown function (DUF3712); InterPro: IPR022185 This domain family is found in eukaryotes, and is approximately 130 amino acids in length

Probab=96.32  E-value=0.1  Score=44.12  Aligned_cols=117  Identities=9%  Similarity=0.091  Sum_probs=73.6

Q ss_pred             EEEEEcCCceeecCCCeEEE-EEEEEEehhhHH-HHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCC---
Q 018706          136 LVSGLIPDSGTIHAHGEETV-KIPVTLIYDDIK-NAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIP---  210 (351)
Q Consensus       136 vasG~~~~~~~Ipa~g~t~v-~vpv~l~~~~L~-~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp---  210 (351)
                      +++-..+ ...+.+.+...+ .-++.+...+.. ++...+-..+++.++++|...+.+..+-...+|++  +.++++   
T Consensus         3 f~~~~lP-~~~~~~~~~~~~~~~~l~i~d~~~f~~f~~~~~~~~~~~l~l~g~~~~~~g~l~~~~i~~~--k~i~l~Gln   79 (125)
T PF12505_consen    3 FATLDLP-QIKIKGNGTISIIDQTLTITDQDAFTQFVTALLFNEEVTLTLRGKTDTHLGGLPFSGIPFD--KTITLKGLN   79 (125)
T ss_pred             eEEEECC-CEEecCCceEEEeeeeEEecCHHHHHHHHHHHHhCCcEEEEEEEeeeEEEccEEEEEEeec--ceeeccccC
Confidence            4444555 233333333333 334444443333 44477777888999999996444332211235554  444443   


Q ss_pred             CCCceeeeeeeEEeec-ccceEEEEEEEEECCCCcccccCCeEEEE
Q 018706          211 YKPDIDLEKIKFERFS-FEETVAILHLKLENKNDFDLALNSLDYEV  255 (351)
Q Consensus       211 ~~P~v~i~~v~~~~vs-~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l  255 (351)
                      ....+.+.++++-.-+ .++..+.+.+.+.||-++.+.+..+..+|
T Consensus        80 ~l~g~~I~~~~v~~~~~~~g~~~~~~~~l~NPS~~ti~lG~v~~~l  125 (125)
T PF12505_consen   80 GLKGFTISDFDVTGGTPADGINLNATVTLPNPSPLTIDLGNVTLNL  125 (125)
T ss_pred             CCCCceEeeEEeecCCCCCcEEEEEEEEEcCCCeEEEEeccEEEeC
Confidence            4567778889877555 68899999999999999999998887764

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=92.14  E-value=1.8  Score=41.01  Aligned_cols=87  Identities=16%  Similarity=0.111  Sum_probs=62.4

Q ss_pred             eEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhh----HHHHHhcc-CCCce
Q 018706          104 ADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDD----IKNAYDDI-KPGMI  178 (351)
Q Consensus       104 ~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~----L~~~l~~l-~~~e~  178 (351)
                      ..+.-.+.|.|||=+|+.+.+++-++...-..++++.......|++.+...+.+.+......    +.++-..- ..=..
T Consensus       124 l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t~i~~~~~yv~~~Ct~~~ikvH~  203 (238)
T PF07092_consen  124 LNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKTTIGDENSYVYKYCTWPKIKVHN  203 (238)
T ss_pred             EEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeEEecCcchhHhHhhcCccceEEE
Confidence            34555699999999999999999999988889999998888899999888777766555432    22322211 11235


Q ss_pred             eeEEEEEEEEEe
Q 018706          179 IPYKIKVDLIVD  190 (351)
Q Consensus       179 i~Y~l~g~l~vd  190 (351)
                      +-..+++++++.
T Consensus       204 i~l~~Q~Tvt~s  215 (238)
T PF07092_consen  204 IVLHMQGTVTVS  215 (238)
T ss_pred             EEEEEEEEEEEE
Confidence            667777777653

The function of this family is unknown.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=92.09  E-value=1.9  Score=40.76  Aligned_cols=101  Identities=13%  Similarity=0.162  Sum_probs=73.1

Q ss_pred             eeeeeeeEEeec-ccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchH
Q 018706          215 IDLEKIKFERFS-FEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFG  293 (351)
Q Consensus       215 v~i~~v~~~~vs-~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~  293 (351)
                      ++...+.|..-. .-...+...|.|.|||=+|+.+.+++-++.-....+|++.......|+|-+..++.+.+..+..+-.
T Consensus       108 v~s~~V~f~~~~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t~i~~~~  187 (238)
T PF07092_consen  108 VKSVTVSFNPDKSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKTTIGDEN  187 (238)
T ss_pred             EEEEEEEEeCCCCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeEEecCcc
Confidence            444455554322 1234677779999999999999999999998889999999999999998887777665555544445


Q ss_pred             HHHHHhhcCC-----CeeEEEEEEEEE
Q 018706          294 SALWDMIRGK-----GTGYTMKGHIDV  315 (351)
Q Consensus       294 ~~l~~l~~~~-----~i~Y~l~G~l~v  315 (351)
                      ..++.+....     .+-..|.+.+++
T Consensus       188 ~yv~~~Ct~~~ikvH~i~l~~Q~Tvt~  214 (238)
T PF07092_consen  188 SYVYKYCTWPKIKVHNIVLHMQGTVTV  214 (238)
T ss_pred             hhHhHhhcCccceEEEEEEEEEEEEEE
Confidence            6577777654     455566666655

The function of this family is unknown.

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=90.88  E-value=2  Score=33.50  Aligned_cols=72  Identities=11%  Similarity=0.183  Sum_probs=47.1

Q ss_pred             CCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEec
Q 018706          212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFR  288 (351)
Q Consensus       212 ~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~  288 (351)
                      +|++.+.....-..-..+..+.+.+.|.|....+  ...+...++++|..+++-.+   ..|+++.+.++.+..+..
T Consensus         1 ~pDL~v~~~~~~~~~~~g~~~~i~~~V~N~G~~~--~~~~~v~~~~~~~~~~~~~i---~~L~~g~~~~v~~~~~~~   72 (101)
T PF07705_consen    1 KPDLTVSITVSPSNVVPGEPVTITVTVKNNGTAD--AENVTVRLYLDGNSVSTVTI---PSLAPGESETVTFTWTPP   72 (101)
T ss_dssp             ---EEE-EEEC-SEEETTSEEEEEEEEEE-SSS---BEEEEEEEEETTEEEEEEEE---SEB-TTEEEEEEEEEE-S
T ss_pred             CCCEEEEEeeCCCcccCCCEEEEEEEEEECCCCC--CCCEEEEEEECCceeccEEE---CCcCCCcEEEEEEEEEeC
Confidence            5777772222222334567889999999988777  66788889999999955444   578999999998888874

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=90.73  E-value=3.7  Score=47.39  Aligned_cols=52  Identities=21%  Similarity=0.307  Sum_probs=40.0

Q ss_pred             EEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceee-cCCCeEEEEEEEE
Q 018706          105 DIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTI-HAHGEETVKIPVT  160 (351)
Q Consensus       105 ~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~I-pa~g~t~v~vpv~  160 (351)
                      ...+.+.++||.+|.|.|.+|  .+...|..+.+-  +....| |++...++.+...
T Consensus       652 ~~~v~VtLqNPf~fel~I~~I--~L~~egv~fes~--~~s~~l~~p~s~~~v~L~g~  704 (1185)
T PF08626_consen  652 PAEVKVTLQNPFKFELEISSI--SLSTEGVPFESY--PVSIVLLPPNSTQTVRLSGT  704 (1185)
T ss_pred             eEEEEEEEECCccceEEEEEE--EEEEcCCccccc--eeeeEecCCCcceEEEEEEE
Confidence            467788999999999999999  888889887433  334666 7777777776544

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].

>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised

Probab=89.43  E-value=4.6  Score=34.76  Aligned_cols=76  Identities=14%  Similarity=0.208  Sum_probs=62.3

Q ss_pred             ceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEE-ECCeEEEEEEeCC----------ceEEcCCCeEEEE
Q 018706          214 DIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVW-LSDASIGAAELTK----------SAKIDKNGISYID  282 (351)
Q Consensus       214 ~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~-lnG~~ia~G~~~~----------~~~I~~~g~t~i~  282 (351)
                      .+++.+.++.......-.+.+...+.|..+++.++-.+.-++. .+|+.+++-.+.-          ...++++++..+.
T Consensus        52 ~l~i~~~~~~~~~~~~~~l~v~g~i~N~~~~~~~~P~l~l~L~D~~g~~l~~r~~~P~~yl~~~~~~~~~l~pg~~~~~~  131 (149)
T PF11906_consen   52 ALKIESSDLRPVPDGPGVLVVSGTIRNRADFPQALPALELSLLDAQGQPLARRVFTPADYLPPGLAAQAGLPPGESVPFR  131 (149)
T ss_pred             eEEEeeeeEEeecCCCCEEEEEEEEEeCCCCcccCceEEEEEECCCCCEEEEEEEChHHhcccccccccccCCCCeEEEE
Confidence            4666666777776667789999999999999999999999999 8999998877722          5678999998888


Q ss_pred             EEEEecc
Q 018706          283 IPITFRP  289 (351)
Q Consensus       283 Vpvtv~~  289 (351)
                      +.+...+
T Consensus       132 ~~~~~p~  138 (149)
T PF11906_consen  132 LRLEDPP  138 (149)
T ss_pred             EEeeCCC
Confidence            8877544

This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=89.09  E-value=4  Score=31.80  Aligned_cols=72  Identities=21%  Similarity=0.208  Sum_probs=46.0

Q ss_pred             CCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEe
Q 018706           86 KPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI  162 (351)
Q Consensus        86 ~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~  162 (351)
                      +|.+.+........-.....+.+.+.|.|.-...  ...+...++++|..+.+-..   ..|+++.+.++.+.+...
T Consensus         1 ~pDL~v~~~~~~~~~~~g~~~~i~~~V~N~G~~~--~~~~~v~~~~~~~~~~~~~i---~~L~~g~~~~v~~~~~~~   72 (101)
T PF07705_consen    1 KPDLTVSITVSPSNVVPGEPVTITVTVKNNGTAD--AENVTVRLYLDGNSVSTVTI---PSLAPGESETVTFTWTPP   72 (101)
T ss_dssp             ---EEE-EEEC-SEEETTSEEEEEEEEEE-SSS---BEEEEEEEEETTEEEEEEEE---SEB-TTEEEEEEEEEE-S
T ss_pred             CCCEEEEEeeCCCcccCCCEEEEEEEEEECCCCC--CCCEEEEEEECCceeccEEE---CCcCCCcEEEEEEEEEeC
Confidence            5777773333333334568889999999988755  66777789999998844333   478888888888877765

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	351
1xo8_A	151	Solution Structure Of At1g01470 From Arabidopsis Th		1e-08
1yyc_A	174	Solution Structure Of A Putative Late Embryogenesis		5e-07

>pdb|1XO8|A Chain A, Solution Structure Of At1g01470 From Arabidopsis Thaliana Length = 151

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 86  KPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXXVESDGRKLVSGLIPDSG 145
           KP   VT V +  +N +  + +  V                    S GR++  G IPD G
Sbjct: 21  KPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPG 80
Query: 146 TIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNG 205
           ++ A     + IPV + Y  + N   D+     I Y++++ L +D+PV G  T+P+   G
Sbjct: 81  SLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKG 140
Query: 206 EIPIP 210
           EI +P
Sbjct: 141 EIKLP 145

>pdb|1YYC|A Chain A, Solution Structure Of A Putative Late Embryogenesis Abundant (Lea) Protein At2g46140.1 Length = 174

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 129 VESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLI 188
           ++S  R + SG IPD G++   G   + +PV + Y    +   D+     I Y++ + L 
Sbjct: 87  LKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLT 146
Query: 189 VDVPVFGRLTLPLEKNGEIPIP 210
            D+PV G +T+P+   GEI +P
Sbjct: 147 FDIPVVGDITIPVSTQGEIKLP 168

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	351
1yyc_A	174	LEA protein, putative late embryogenesis abundant	2e-53
1yyc_A	174	LEA protein, putative late embryogenesis abundant	6e-15
1xo8_A	151	AT1G01470; structural genomics, protein structure	2e-51
1xo8_A	151	AT1G01470; structural genomics, protein structure	8e-16
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	3e-26
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	2e-09

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana} Length = 174

 Score =  172 bits (438), Expect = 2e-53
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 6/171 (3%)

Query: 45  DVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERA 104
           +        ++K       ++K K F        E+      P A V  V    +  +  
Sbjct: 9   EASADEKVVEEKASVISSLLDKAKGFF------AEKLANIPTPEATVDDVDFKGVTRDGV 62

Query: 105 DIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYD 164
           D    V +KNP    IP+  I+Y+++S  R + SG IPD G++   G   + +PV + Y 
Sbjct: 63  DYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYS 122

Query: 165 DIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
              +   D+     I Y++ + L  D+PV G +T+P+   GEI +P   D 
Sbjct: 123 IAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDF 173

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana} Length = 174

 Score = 71.2 bits (174), Expect = 6e-15
 Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 4/131 (3%)

Query: 201 LEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDA 260
            EK   IP    P+  ++ + F+  + +       + ++N     + +  + Y +  +  
Sbjct: 36  AEKLANIP---TPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATR 92

Query: 261 SIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTP-F 319
           +I +  +     +  +G + +D+P+        S + DM       Y +   +  D P  
Sbjct: 93  TIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVV 152

Query: 320 GAMKLPISKEG 330
           G + +P+S +G
Sbjct: 153 GDITIPVSTQG 163

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1 Length = 151

 Score =  167 bits (423), Expect = 2e-51
 Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 62  GFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIP 121
             ++K KDF+       ++     KP   VT V +  +N +  + +  V + NP    IP
Sbjct: 3   SLLDKAKDFVA------DKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIP 56

Query: 122 LIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPY 181
           + +I++   S GR++  G IPD G++ A     + IPV + Y  + N   D+     I Y
Sbjct: 57  ICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDY 116

Query: 182 KIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
           ++++ L +D+PV G  T+P+   GEI +P   D 
Sbjct: 117 ELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDF 150

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1 Length = 151

 Score = 73.1 bits (179), Expect = 8e-16
 Identities = 17/120 (14%), Positives = 46/120 (38%), Gaps = 1/120 (0%)

Query: 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSA 271
           KP+  +  +  +  + +    +  + + N     + +  + +    +   IG  ++    
Sbjct: 21  KPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPG 80

Query: 272 KIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEG 330
            +    ++ +DIP+        +   D+       Y ++  + +D P  G   +PIS +G
Sbjct: 81  SLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKG 140

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304} Length = 136

 Score =  100 bits (251), Expect = 3e-26
 Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 92  TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
                  +   + +IV    ++N + +PI +   +Y +E +G K+  G      T+    
Sbjct: 6   VKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPAS 65

Query: 152 EETVKIPVTLIYDDIKNAY-DDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
             T+K  + L    ++  +   I  G     ++ +   +++     + +P+
Sbjct: 66  ATTLKFSLRLNNSFLREWWVTHIANGEKTKIRVAIKPTIEIG-GRDVEVPV 115

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304} Length = 136

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 10/131 (7%), Positives = 37/131 (28%), Gaps = 3/131 (2%)

Query: 219 KIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGI 278
           K  +   +  +T  +   K+ N++   + ++   Y + ++   +          +     
Sbjct: 7   KAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASA 66

Query: 279 SYIDIPITFRPKDFGSALWDMIR-GKGTGYTMKGHIDVDTPFGAMKLPISKEGGTTRLKK 337
           + +   +              I  G+ T   +     ++     +++P+      +    
Sbjct: 67  TTLKFSLRLNNSFLREWWVTHIANGEKTKIRVAIKPTIEIGGRDVEVPVFLR--ESEFTT 124

Query: 338 NKEDGGDDDDD 348
                G     
Sbjct: 125 KLLSEGHHHHH 135

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	351
1yyc_A	174	LEA protein, putative late embryogenesis abundant	100.0
1xo8_A	151	AT1G01470; structural genomics, protein structure	100.0
1yyc_A	174	LEA protein, putative late embryogenesis abundant	99.95
1xo8_A	151	AT1G01470; structural genomics, protein structure	99.95
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	99.86
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	99.83
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	89.65
1ex0_A	731	Coagulation factor XIII A chain; transglutaminase,	82.05
1g0d_A	695	Protein-glutamine gamma-glutamyltransferase; tissu	81.39

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=100.00  E-value=1.5e-37  Score=276.58  Aligned_cols=153  Identities=29%  Similarity=0.561  Sum_probs=148.1

Q ss_pred             cccccchhHHHHHHHHhhhhhhhcccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEE
Q 018706           57 EEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKL  136 (351)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~k~~~~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~v  136 (351)
                      ...|+|||||||+|+   ||||++   +++|+|++++++|.++++.+++|.++++|+|||++|||+.+++|+|++||+++
T Consensus        21 ~~~~~~~~~~~k~f~---~~ki~~---~~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~l   94 (174)
T 1yyc_A           21 ASVISSLLDKAKGFF---AEKLAN---IPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTI   94 (174)
T ss_dssp             HHHHHHHHHHHHHHH---HHTTTT---SCCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCE
T ss_pred             hhhhhHHHHHhhhhH---HHhhcC---CCCCEEEEEEeEEeccccceEEEEEEEEEECCCCCCccccceEEEEEECCEEE
Confidence            467899999999999   999987   49999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCCCCCce
Q 018706          137 VSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI  215 (351)
Q Consensus       137 asG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v  215 (351)
                      ++|+++++++|||+|++++++|++++|..+.+.++++.+++.++|+++|++.+++|++|.+++||+++|+++||++|++
T Consensus        95 asG~s~~~~tIpa~g~~~v~Vpv~v~~~~l~~~~~~l~~~~~i~Y~L~g~L~id~pv~G~~tip~s~~Gei~LP~l~d~  173 (174)
T 1yyc_A           95 ASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDF  173 (174)
T ss_dssp             EEEEESCCCBCCSSEEEEEEEEEEESHHHHHHTCCCCCSSEEECEEEEEEEEEECTTSSEEEEEEEEECCEEECTTSSC
T ss_pred             EEEecCCCceECCCCcEEEEEEEEEEHHHHHHHHHhcCCCCccceEEEEEEEeccCCcCCEEEeEeeceEEECCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999988999999999999999999975

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=100.00  E-value=1.7e-37  Score=270.98  Aligned_cols=150  Identities=31%  Similarity=0.606  Sum_probs=145.7

Q ss_pred             ccchhHHHHHHHHhhhhhhhcccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEE
Q 018706           60 KGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSG  139 (351)
Q Consensus        60 ~~~~~~~~~~~~~~~~~k~~~~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG  139 (351)
                      |+|||||||+|+   ||||++   +++|+|++++++|.++++.+++|.++++|+|||++||++.+++|+|++||+++++|
T Consensus         1 ~~~~~~~~~~f~---~~k~~~---~~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG   74 (151)
T 1xo8_A            1 MASLLDKAKDFV---ADKLTA---IPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKG   74 (151)
T ss_dssp             CTTSCSCCCTTC---SSSCCC---CCSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEE
T ss_pred             ChhHHHHHHHHH---HHhhcC---CCCCEEEEEEeEEeccCcceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEE
Confidence            789999999999   999987   49999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCCCCCce
Q 018706          140 LIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI  215 (351)
Q Consensus       140 ~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v  215 (351)
                      +++++++|||+|++++++|++++|..+.+.++++.+++.++|+++|++.+++|++|.+++||+++|++++|++|++
T Consensus        75 ~~~~~~~ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~i~lp~~G~~tip~~~~Gei~lp~~~d~  150 (151)
T 1xo8_A           75 KIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDF  150 (151)
T ss_dssp             EEEECCCCSSSSEEEEEECCCEEHHHHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECCSCSSC
T ss_pred             ecCCCcEECCCCcEEEEEEEEEEHHHHHHHHHhcccCCcccEEEEEEEEEcccccCcEEEeEeeccEEECCCCCCC
Confidence            9999999999999999999999999999999999899999999999999999977999999999999999999975

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=99.95  E-value=5.2e-28  Score=215.11  Aligned_cols=125  Identities=14%  Similarity=0.287  Sum_probs=121.0

Q ss_pred             CCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEeccc
Q 018706          211 YKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPK  290 (351)
Q Consensus       211 ~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~  290 (351)
                      .+|+|++++++|.++++.++++.++|+|+|||+||||+++++|+|++||+.+++|+++++++|||+++++++||+++++.
T Consensus        43 ~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~v~~~  122 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYS  122 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEEESHH
T ss_pred             CCCEEEEEEeEEeccccceEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEEEEHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             chHHHHHHhhcCCCeeEEEEEEEEEccC-ccceEeeeecccceeee
Q 018706          291 DFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEGGTTRL  335 (351)
Q Consensus       291 ~~~~~l~~l~~~~~i~Y~l~G~l~vd~p-fG~~~iP~s~~G~~~~~  335 (351)
                      ++.+.+.++.++|.++|+++|++.+++| ||.++|||+++|++++=
T Consensus       123 ~l~~~~~~l~~~~~i~Y~L~g~L~id~pv~G~~tip~s~~Gei~LP  168 (174)
T 1yyc_A          123 IAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLP  168 (174)
T ss_dssp             HHHHTCCCCCSSEEECEEEEEEEEEECTTSSEEEEEEEEECCEEEC
T ss_pred             HHHHHHHhcCCCCccceEEEEEEEeccCCcCCEEEeEeeceEEECC
Confidence            8888888888888999999999999999 89999999999999984

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=99.95  E-value=3e-28  Score=212.38  Aligned_cols=125  Identities=14%  Similarity=0.287  Sum_probs=121.8

Q ss_pred             CCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEeccc
Q 018706          211 YKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPK  290 (351)
Q Consensus       211 ~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~  290 (351)
                      .+|+|++++++|.++++.++++.++|+|+|||+|||++++++|+|++||+.+++|+++++.+||++|+++++||+++++.
T Consensus        20 ~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~v~~~   99 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYS   99 (151)
T ss_dssp             CSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCCEEHH
T ss_pred             CCCEEEEEEeEEeccCcceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEEEEHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             chHHHHHHhhcCCCeeEEEEEEEEEccC-ccceEeeeecccceeee
Q 018706          291 DFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEGGTTRL  335 (351)
Q Consensus       291 ~~~~~l~~l~~~~~i~Y~l~G~l~vd~p-fG~~~iP~s~~G~~~~~  335 (351)
                      .+.+.+.++.++|.++|+++|++.+++| +|.++|||+++|++++=
T Consensus       100 ~l~~~~~~l~~~~~i~Y~l~g~l~i~lp~~G~~tip~~~~Gei~lp  145 (151)
T 1xo8_A          100 ILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLP  145 (151)
T ss_dssp             HHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECC
T ss_pred             HHHHHHHhcccCCcccEEEEEEEEEcccccCcEEEeEeeccEEECC
Confidence            8888899998999999999999999999 89999999999999984

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=99.86  E-value=1.1e-20  Score=161.76  Aligned_cols=113  Identities=15%  Similarity=0.260  Sum_probs=105.4

Q ss_pred             EEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHH
Q 018706           89 ADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKN  168 (351)
Q Consensus        89 Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~  168 (351)
                      |.-.+.+|+.++.+.++|.++++|+|||++||++.+++|+|++||+++++|.+.+.++||++|++++++++++++.++++
T Consensus         3 v~~i~~~WG~v~~~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~   82 (136)
T 3but_A            3 LESVKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE   82 (136)
T ss_dssp             EEEEEEEECCCCSSEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred             ccceeeeeccEeCcEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence            45567789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-hccCCCceeeEEEEEEEEEecccccceeeeee
Q 018706          169 AY-DDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLE  202 (351)
Q Consensus       169 ~l-~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e  202 (351)
                      || +|+++++...|+++.++.++++. +.+++|+.
T Consensus        83 ~~~~hi~nge~s~l~i~~~~~l~v~g-~~~~vp~~  116 (136)
T 3but_A           83 WWVTHIANGEKTKIRVAIKPTIEIGG-RDVEVPVF  116 (136)
T ss_dssp             HHHHHHHTTSEEEEEEEEEEEEECC--CCEECCCE
T ss_pred             HHHHHhhcCCceEEEEEEEEEEEeCC-EEEEEccc
Confidence            88 99999999999999999999986 57787764

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=99.83  E-value=6.1e-20  Score=157.21  Aligned_cols=113  Identities=8%  Similarity=0.122  Sum_probs=106.0

Q ss_pred             eeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchHH
Q 018706          215 IDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGS  294 (351)
Q Consensus       215 v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~~  294 (351)
                      |.-++.+|+.++.+.++|.++|+|+|||++||++++++|+|++||+.+|+|.+.+..+||+++++++++++++++..+.+
T Consensus         3 v~~i~~~WG~v~~~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~   82 (136)
T 3but_A            3 LESVKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE   82 (136)
T ss_dssp             EEEEEEEECCCCSSEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred             ccceeeeeccEeCcEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence            56678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCeeEEEEEEEEEccCccceEeeee
Q 018706          295 ALWDMIR-GKGTGYTMKGHIDVDTPFGAMKLPIS  327 (351)
Q Consensus       295 ~l~~l~~-~~~i~Y~l~G~l~vd~pfG~~~iP~s  327 (351)
                      +|..+++ ++...|+++.++.++.+.+.+++|+.
T Consensus        83 ~~~~hi~nge~s~l~i~~~~~l~v~g~~~~vp~~  116 (136)
T 3but_A           83 WWVTHIANGEKTKIRVAIKPTIEIGGRDVEVPVF  116 (136)
T ss_dssp             HHHHHHHTTSEEEEEEEEEEEEECC-CCEECCCE
T ss_pred             HHHHHhhcCCceEEEEEEEEEEEeCCEEEEEccc
Confidence            9977764 45899999999999999999999987

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=89.65  E-value=0.96  Score=36.02  Aligned_cols=70  Identities=17%  Similarity=0.311  Sum_probs=45.3

Q ss_pred             CCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEE
Q 018706           84 FGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVT  160 (351)
Q Consensus        84 f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~  160 (351)
                      |..|.+++.   +.+----...+.+.+.++||.+  .+|.+..+.++--|.  ..+..-+...|+++++..+++.++
T Consensus         3 ~~~P~i~I~---v~g~~~v~~~l~v~vsf~NPL~--~~L~~c~~~vEG~GL--~~~~~~~~~~v~pg~~~~~~~~~~   72 (102)
T 2xzz_A            3 YFQSMLSLT---LLGAAVVGQECEVQIVFKNPLP--VTLTNVVFRLEGSGL--QRPKILNVGDIGGNETVTLRQSFV   72 (102)
T ss_dssp             ---CEEEEE---ESSCCCSSSCEEEEEEEECCSS--SCBCSEEEEEEETTT--EEEEEEEECCBCTTCEEEEEEEEC
T ss_pred             ccCCcEEEE---ECCCcccCCeEEEEEEEECCCC--CcccCEEEEEECCCC--CcceEEEcCcCCCCCEEEEEEEEe
Confidence            567888654   4433445677899999999987  667788778887774  333333346688877777666543

>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A

Probab=82.05  E-value=32  Score=36.29  Aligned_cols=170  Identities=11%  Similarity=-0.014  Sum_probs=96.1

Q ss_pred             ceeEEEEEEEEECCCCCCeeeec--eEEEEEECCEEEEEEE-cCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCce
Q 018706          102 ERADIVIDVLIKNPNPIPIPLID--INYLVESDGRKLVSGL-IPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMI  178 (351)
Q Consensus       102 ~~~~l~v~l~V~NPNp~~L~l~~--i~Y~l~~nG~~vasG~-~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~  178 (351)
                      -+..|.+.+.+.|...-.-.+.-  -.-.++-+|.....-. .....+++++.+.+  +++.+.|.+=.+.+   .....
T Consensus       529 iG~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~--i~~~i~y~~Y~~~L---~d~~~  603 (731)
T 1ex0_A          529 LGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKK--EAVLIQAGEYMGQL---LEQAS  603 (731)
T ss_dssp             TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEE--EEEEECHHHHTTTC---CTTCE
T ss_pred             CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEE--EEEEECHHHHhhhc---cCCCE
Confidence            45689999999999886644311  1223444776443322 22246787775555  67778877544333   33333


Q ss_pred             eeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEEC
Q 018706          179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLS  258 (351)
Q Consensus       179 i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ln  258 (351)
                      +.  +.+...+...   ...+-.+  ..|.| .+|++.   +++.+-..-+..+.+.++++||-+.  ++.+-.+.|.-.
T Consensus       604 i~--~~a~~~v~et---~~~~~~~--~di~l-~~P~l~---I~v~g~~~v~~~l~v~vsf~NPL~~--~L~~c~~~vEG~  670 (731)
T 1ex0_A          604 LH--FFVTARINET---RDVLAKQ--KSTVL-TIPEII---IKVRGTQVVGSDMTVTVQFTNPLKE--TLRNVWVHLDGP  670 (731)
T ss_dssp             EE--EEEEEEETTT---CCEEEEE--EEEEC-BCCCCE---EEEEECCBTTSCEEEEEEEECCSSS--CEEEEEEEEEET
T ss_pred             EE--EEEEEEECCC---CeEEEEE--EEEEE-eCCCEE---EEeCCCcccCCeEEEEEEEECCCCC--cccceEEEEECC
Confidence            33  3333333321   1112122  22333 567765   3444444557789999999988655  455655566655


Q ss_pred             CeEEEEEEeCCceEEcCCCeEEEEEEEEecccchH
Q 018706          259 DASIGAAELTKSAKIDKNGISYIDIPITFRPKDFG  293 (351)
Q Consensus       259 G~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~  293 (351)
                      |  +-.+..-.-..|+|+++..+.+.++  |...+
T Consensus       671 G--L~~~~~~~~~~v~pg~~~~~~~~~~--P~~~G  701 (731)
T 1ex0_A          671 G--VTRPMKKMFREIRPNSTVQWEEVCR--PWVSG  701 (731)
T ss_dssp             T--TEEEEEEEEEEECTTCEEEEEEEEC--CSSCE
T ss_pred             C--CCceeeEecCccCCCCEEEEEEEEE--ecccc
Confidence            5  4444544567899998877766665  54433

>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4

Probab=81.39  E-value=25  Score=36.89  Aligned_cols=170  Identities=15%  Similarity=0.078  Sum_probs=93.0

Q ss_pred             ceeEEEEEEEEECCCCCCeee--eceEEEEEECCEEEEE-EEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCce
Q 018706          102 ERADIVIDVLIKNPNPIPIPL--IDINYLVESDGRKLVS-GLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMI  178 (351)
Q Consensus       102 ~~~~l~v~l~V~NPNp~~L~l--~~i~Y~l~~nG~~vas-G~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~  178 (351)
                      -+..|.+.+.+.|...-.-.+  .--.-.++-+|..... +...-..+++++.+.+  +++.+.|.+=.+.+   .....
T Consensus       484 ~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~--v~~~i~y~~Y~~~L---~d~~~  558 (695)
T 1g0d_A          484 FGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHK--EVMRLHYDDYVRCV---SEHHL  558 (695)
T ss_dssp             TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEE--EEEEECHHHHTTTC---CTTCE
T ss_pred             CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEE--EEEEECHHHHhhhc---ccCCe
Confidence            567899999999988866433  1111233336653322 1122246777766554  67778877544333   33333


Q ss_pred             eeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEEC
Q 018706          179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLS  258 (351)
Q Consensus       179 i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ln  258 (351)
                      +..  .+...+...   ...+  -.+..|.| .+|++.|.   +.+-..-+..+.+.+.++||-+  +++.+..+.|.-.
T Consensus       559 i~~--~a~~~v~et---~~~~--~~~~di~l-~~P~l~I~---v~g~~~v~~~l~a~vsf~NPL~--~~L~~c~~~vEG~  625 (695)
T 1g0d_A          559 IRV--KALLDAPGE---NGPI--MTVANIPL-STPELLVQ---VPGKAVVWEPLTAYVSFTNPLP--VPLKGGVFTLEGA  625 (695)
T ss_dssp             EEE--EEEEECCC------EE--EEEEEEEC-BCCCCEEE---CCSCEETTCCEEEEEEEECCSS--SCEESCEEEEEET
T ss_pred             EEE--EEEEEECCC---CeEE--EEEEEEEE-cCCCEEEE---eCCCcccCCeEEEEEEEECCCC--CcccceEEEEECC
Confidence            333  333332211   1112  22233333 56776533   3333344678888999988755  5566777777777


Q ss_pred             CeEEEEEEeCCc-eEEcCCCeEEEEEEEEecccchH
Q 018706          259 DASIGAAELTKS-AKIDKNGISYIDIPITFRPKDFG  293 (351)
Q Consensus       259 G~~ia~G~~~~~-~~I~~~g~t~i~Vpvtv~~~~~~  293 (351)
                      |..  .+..-.- ..|+|+++..+.+.++  |...+
T Consensus       626 GL~--~~~~~~~~~~v~Pg~~~~~~~~~~--P~~~G  657 (695)
T 1g0d_A          626 GLL--SATQIHVNGAVAPSGKVSVKLSFS--PMRTG  657 (695)
T ss_dssp             TTE--EEEEEECSSEECTTCEEEEEEEEC--CSSCE
T ss_pred             CCC--cceEEecCCCcCCCCEEEEEEEEE--cCCcc
Confidence            743  3333333 5799998877666655  55443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	351
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	3e-51
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	9e-26

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  165 bits (419), Expect = 3e-51
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 62  GFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIP 121
             ++K KDF+ D    I       KP   VT V +  +N +  + +  V + NP    IP
Sbjct: 3   SLLDKAKDFVADKLTAIP------KPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIP 56

Query: 122 LIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPY 181
           + +I++   S GR++  G IPD G++ A     + IPV + Y  + N   D+     I Y
Sbjct: 57  ICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDY 116

Query: 182 KIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
           ++++ L +D+PV G  T+P+   GEI +P   D 
Sbjct: 117 ELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDF 150

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.7 bits (246), Expect = 9e-26
 Identities = 17/120 (14%), Positives = 46/120 (38%), Gaps = 1/120 (0%)

Query: 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSA 271
           KP+  +  +  +  + +    +  + + N     + +  + +    +   IG  ++    
Sbjct: 21  KPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPG 80

Query: 272 KIDKNGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEG 330
            +    ++ +DIP+        +   D+       Y ++  + +D P  G   +PIS +G
Sbjct: 81  SLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKG 140

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	351
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	100.0
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	99.95
d1jz8a2	105	beta-Galactosidase, domains 2 and 4 {Escherichia c	93.86
d2je8a1	111	Beta-mannosidase, domains 2, 4 and 5 {Bacteroides	92.49
d1jz8a2	105	beta-Galactosidase, domains 2 and 4 {Escherichia c	89.2
d2je8a1	111	Beta-mannosidase, domains 2, 4 and 5 {Bacteroides	85.22
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	82.9

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-37  Score=270.20  Aligned_cols=150  Identities=31%  Similarity=0.602  Sum_probs=146.7

Q ss_pred             ccchhHHHHHHHHhhhhhhhcccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEE
Q 018706           60 KGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSG  139 (351)
Q Consensus        60 ~~~~~~~~~~~~~~~~~k~~~~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG  139 (351)
                      |+|||||||+|+   |||++++   ++|+|++++++|.+++++++++.++++|+|||+++|++.+++|+|++||+++++|
T Consensus         1 ~~~~~~~~~~~~---~~~~~~~---~kPev~l~~v~i~~v~~~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G   74 (151)
T d1xo8a_           1 MASLLDKAKDFV---ADKLTAI---PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKG   74 (151)
T ss_dssp             CTTSCSCCCTTC---SSSCCCC---CSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEE
T ss_pred             ChhHHHHHHHHH---HHHhcCC---CCCeEEEEEEEeeecccceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeE
Confidence            789999999999   9999887   8999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCCCCCce
Q 018706          140 LIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI  215 (351)
Q Consensus       140 ~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v  215 (351)
                      +++++++|||+|++.+++|++++|.++.++++++.+++.++|+++|++.+++|++|.++|||+++|+++||++|++
T Consensus        75 ~~~~~~~ipa~~~~~v~vpv~v~~~~l~~~~~~i~~~~~i~Y~l~g~l~~d~pv~G~~tiP~~~~Gei~lP~l~d~  150 (151)
T d1xo8a_          75 KIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDF  150 (151)
T ss_dssp             EEEECCCCSSSSEEEEEECCCEEHHHHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECCSCSSC
T ss_pred             ecCCCcEEcCCCcEEEEEEEEEEHHHHHHHHHhhccCCCccEEEEEEEEEecCccCceEeeeccCCEEECCccccc
Confidence            9999999999999999999999999999999999999999999999999999988999999999999999999985

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=4.1e-29  Score=215.76  Aligned_cols=124  Identities=14%  Similarity=0.296  Sum_probs=121.9

Q ss_pred             CCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEeccc
Q 018706          211 YKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPK  290 (351)
Q Consensus       211 ~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~  290 (351)
                      .+|+|++++++|.++++.++++.++++|+|||+|+|++++++|+|++||+.+++|++.++.+||+++++.++||+++++.
T Consensus        20 ~kPev~l~~v~i~~v~~~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~vpv~v~~~   99 (151)
T d1xo8a_          20 PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYS   99 (151)
T ss_dssp             CSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCCEEHH
T ss_pred             CCCeEEEEEEEeeecccceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEEEEEEEHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHhhcCCCeeEEEEEEEEEccC-ccceEeeeecccceee
Q 018706          291 DFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEGGTTR  334 (351)
Q Consensus       291 ~~~~~l~~l~~~~~i~Y~l~G~l~vd~p-fG~~~iP~s~~G~~~~  334 (351)
                      ++.++++++.++|+++|+++|++++++| +|.++|||+++|++++
T Consensus       100 ~l~~~~~~i~~~~~i~Y~l~g~l~~d~pv~G~~tiP~~~~Gei~l  144 (151)
T d1xo8a_         100 ILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKL  144 (151)
T ss_dssp             HHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEEC
T ss_pred             HHHHHHHhhccCCCccEEEEEEEEEecCccCceEeeeccCCEEEC
Confidence            9999999999999999999999999999 7999999999999987

>d1jz8a2 b.1.4.1 (A:626-730) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: beta-Galactosidase/glucuronidase domain
family: beta-Galactosidase/glucuronidase domain
domain: beta-Galactosidase, domains 2 and 4
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.051  Score=41.47  Aligned_cols=50  Identities=16%  Similarity=0.292  Sum_probs=40.8

Q ss_pred             EEEEECCCCcc-cccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEE
Q 018706          235 HLKLENKNDFD-LALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPIT  286 (351)
Q Consensus       235 ~l~V~NPN~fp-L~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvt  286 (351)
                      .++|.|.+.|- +.=-.+.|+|..||+.+++|.+.  ..|+|+++..+.+|..
T Consensus        10 ~v~V~N~~~F~~l~~~~l~w~l~~dG~~i~sg~~~--l~i~P~~s~~i~lp~~   60 (105)
T d1jz8a2          10 TIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVP--LDVAPQGKQLIELPEL   60 (105)
T ss_dssp             EEEEEECCSSCCCTTCEEEEEEEETTEEEEEEEEE--CCCCTTCEEEEECCCC
T ss_pred             EEEEEEEeecccCCCcEEEEEEEECCEEEecceEc--cccCCCccEEEEcCCC
Confidence            48999999984 33225889999999999999994  4699999999988743

>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: beta-Galactosidase/glucuronidase domain
family: beta-Galactosidase/glucuronidase domain
domain: Beta-mannosidase, domains 2, 4 and 5
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=92.49  E-value=1.3  Score=32.95  Aligned_cols=94  Identities=14%  Similarity=0.220  Sum_probs=66.7

Q ss_pred             EEEEeEEec--ccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhH
Q 018706           89 ADVTAVHIP--KINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDI  166 (351)
Q Consensus        89 Vsv~~v~i~--~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L  166 (351)
                      +.|.++.+.  .++...+.+.+++.|.|....+..+ .+...+..+|..+++....  ..+.+ +...+.+++.+.+-  
T Consensus         2 a~I~D~~i~~~~~~~~~A~l~~~~~l~n~~~~~~~~-~v~~~i~~~~~~~~~~~~~--~~~~~-~~~~v~~~~~i~~p--   75 (111)
T d2je8a1           2 ATISDYYVRQLSLTDENARLSNELIVNQIVPQKIPA-EVRVNVSLNGTTVTEVKQQ--VTLQP-GINHITLPAEVTNP--   75 (111)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEEEEEECSSSCEEE-EEEEEEEETTEEEEEEEEE--EEECS-EEEEEEEEEEEESC--
T ss_pred             eEEEEEEEecCccCCcEEEEEEEEEEEeCCCCceEE-EEEEEEecCCcEEEEEEEE--EEecc-cccEEEEEEEeCCc--
Confidence            356777774  6677889999999999999877764 3566778899988877644  55554 45678888887763  


Q ss_pred             HHHHhccCCCceeeEEEEEEEEE
Q 018706          167 KNAYDDIKPGMIIPYKIKVDLIV  189 (351)
Q Consensus       167 ~~~l~~l~~~e~i~Y~l~g~l~v  189 (351)
                       .+|.--.-|+.--|+++..+..
T Consensus        76 -~LW~P~g~g~P~LY~~~v~l~~   97 (111)
T d2je8a1          76 -VRWMPNGWGTPTLYDFSAQIAC   97 (111)
T ss_dssp             -CCBCCTTSSCBCCEEEEEEEEE
T ss_pred             -cCcCCCCCCCCceEEEEEEEEE
Confidence             4442112346678888888864

>d1jz8a2 b.1.4.1 (A:626-730) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: beta-Galactosidase/glucuronidase domain
family: beta-Galactosidase/glucuronidase domain
domain: beta-Galactosidase, domains 2 and 4
species: Escherichia coli [TaxId: 562]

Probab=89.20  E-value=0.25  Score=37.30  Aligned_cols=47  Identities=19%  Similarity=0.420  Sum_probs=38.9

Q ss_pred             EEEEECCCCCCeee--eceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEE
Q 018706          109 DVLIKNPNPIPIPL--IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIP  158 (351)
Q Consensus       109 ~l~V~NPNp~~L~l--~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vp  158 (351)
                      .+.|.|-+.|- .+  -.+.|+|..||+.+.+|...  ..|+|+++.++.+|
T Consensus        10 ~v~V~N~~~F~-~l~~~~l~w~l~~dG~~i~sg~~~--l~i~P~~s~~i~lp   58 (105)
T d1jz8a2          10 TIEVTSEYLFR-HSDNELLHWMVALDGKPLASGEVP--LDVAPQGKQLIELP   58 (105)
T ss_dssp             EEEEEECCSSC-CCTTCEEEEEEEETTEEEEEEEEE--CCCCTTCEEEEECC
T ss_pred             EEEEEEEeecc-cCCCcEEEEEEEECCEEEecceEc--cccCCCccEEEEcC
Confidence            47899999873 34  35889999999999999985  46899999888876

>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: beta-Galactosidase/glucuronidase domain
family: beta-Galactosidase/glucuronidase domain
domain: Beta-mannosidase, domains 2, 4 and 5
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=85.22  E-value=3.9  Score=30.05  Aligned_cols=94  Identities=12%  Similarity=0.114  Sum_probs=66.6

Q ss_pred             eeeeeeEE--eecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchH
Q 018706          216 DLEKIKFE--RFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFG  293 (351)
Q Consensus       216 ~i~~v~~~--~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~  293 (351)
                      .+.++.+.  .++...+.+.+.+.|.|....+..+ .+...+..+|..+.+...  ...+.++ ...+.+++.+..   +
T Consensus         3 ~I~D~~i~~~~~~~~~A~l~~~~~l~n~~~~~~~~-~v~~~i~~~~~~~~~~~~--~~~~~~~-~~~v~~~~~i~~---p   75 (111)
T d2je8a1           3 TISDYYVRQLSLTDENARLSNELIVNQIVPQKIPA-EVRVNVSLNGTTVTEVKQ--QVTLQPG-INHITLPAEVTN---P   75 (111)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEEEEEECSSSCEEE-EEEEEEEETTEEEEEEEE--EEEECSE-EEEEEEEEEEES---C
T ss_pred             EEEEEEEecCccCCcEEEEEEEEEEEeCCCCceEE-EEEEEEecCCcEEEEEEE--EEEeccc-ccEEEEEEEeCC---c
Confidence            45666665  4566778899999999988877663 357777889988887663  4556654 567888888754   4


Q ss_pred             HHHHHhhcCCCeeEEEEEEEEEc
Q 018706          294 SALWDMIRGKGTGYTMKGHIDVD  316 (351)
Q Consensus       294 ~~l~~l~~~~~i~Y~l~G~l~vd  316 (351)
                      +.||-..-|.+--|+++..+..+
T Consensus        76 ~LW~P~g~g~P~LY~~~v~l~~~   98 (111)
T d2je8a1          76 VRWMPNGWGTPTLYDFSAQIACG   98 (111)
T ss_dssp             CCBCCTTSSCBCCEEEEEEEEET
T ss_pred             cCcCCCCCCCCceEEEEEEEEEC
Confidence            44554444677889999888753

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=82.90  E-value=1.7  Score=32.48  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=38.1

Q ss_pred             ceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEE
Q 018706          102 ERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPV  159 (351)
Q Consensus       102 ~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv  159 (351)
                      -+..+.+.+.++||.+  .+|.+..+.++--|..  ....-....|+++++.++++.+
T Consensus        15 v~~~~~v~v~F~NPL~--~~L~nc~~~vEG~GL~--~~~~~~~~~v~p~~~~~~~~~~   68 (100)
T d1ex0a3          15 VGSDMTVTVQFTNPLK--ETLRNVWVHLDGPGVT--RPMKKMFREIRPNSTVQWEEVC   68 (100)
T ss_dssp             TTSCEEEEEEEECCSS--SCEEEEEEEEEETTTE--EEEEEEEEEECTTCEEEEEEEE
T ss_pred             cCCeEEEEEEEECCCC--CchhCEEEEEEcCCCc--eeeEEecCccCCCCEEEEEEEE
Confidence            4567889999999887  6677887788887853  3333345678888777665553