Citrus Sinensis ID: 018724
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| 388523085 | 367 | unknown [Lotus japonicus] | 0.991 | 0.948 | 0.619 | 1e-133 | |
| 359485318 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.988 | 0.636 | 1e-132 | |
| 356567386 | 352 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.980 | 0.634 | 1e-130 | |
| 255637255 | 352 | unknown [Glycine max] | 0.974 | 0.971 | 0.64 | 1e-130 | |
| 356567743 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.955 | 0.618 | 1e-130 | |
| 356566157 | 426 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.809 | 0.613 | 1e-130 | |
| 357459321 | 351 | hypothetical protein MTR_3g049330 [Medic | 0.985 | 0.985 | 0.629 | 1e-129 | |
| 356567745 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.955 | 0.604 | 1e-126 | |
| 255551531 | 360 | conserved hypothetical protein [Ricinus | 0.974 | 0.95 | 0.6 | 1e-126 | |
| 356553583 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.912 | 0.646 | 1e-125 |
| >gi|388523085|gb|AFK49604.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/368 (61%), Positives = 278/368 (75%), Gaps = 20/368 (5%)
Query: 1 MDSFAIGAKLLLLLLSLVVHGE----------------SKGCDIFQGSWVHDETYPLYDA 44
M S + +L L L + +HG+ GCD+F+G WV+DE+YPLYD+
Sbjct: 3 MRSLTTISAVLFLALLIQIHGKDDHDVNYQKQLTAGFGKSGCDLFEGRWVYDESYPLYDS 62
Query: 45 STDCPFIEKQFDCQKNGRPDKDYLKYRWQPTGCNLPRFNGRDFLLRHQGKSILFVGDSLS 104
S CPF E+QFDCQKNGRPDK +LKYRWQPTGCNLPRFNG DFL R++GKSI+FVGDSLS
Sbjct: 63 SR-CPFFEQQFDCQKNGRPDKFHLKYRWQPTGCNLPRFNGEDFLRRYRGKSIMFVGDSLS 121
Query: 105 LNQWQSLTCMLHKAVPESKYQLTRVGDLSTFTFLRFNTQVMFSRKPFLVDLVKTSAGRVL 164
LNQWQSLTCMLH AVP+++Y L R G LS FTF + ++MFSR +LVD+V GRV+
Sbjct: 122 LNQWQSLTCMLHTAVPQAQYTLVRTGGLSIFTFTTYGVKLMFSRNAYLVDIVGEPIGRVM 181
Query: 165 KLGSTESGALWKDKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTM-RDMNRLVAFEKALNT 223
KL S E+G WK KDVLIF++WHWWLH+GRKQ WD+I++G++ + DMNRLV +EKALNT
Sbjct: 182 KLDSIEAGKTWKGKDVLIFDSWHWWLHTGRKQAWDFIQEGNKPLVGDMNRLVVYEKALNT 241
Query: 224 WAKWVDANIDPTKTKVFYQGVSPDHTNATSWGHSNATKDCREETQPFIGHKYRRGSPAAE 283
WAKWV+ANIDPTKT+V +QGVSPDH NA WG A C +++P +G Y G AE
Sbjct: 242 WAKWVNANIDPTKTRVLFQGVSPDHANAGQWGEPGAN-SCVGQSRPLLGFNYPGGPHPAE 300
Query: 284 LVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVGGHMEADCSHWCLAGVPDTWNQL 343
LV+EKV+ M KPV+LL +T LSQLRKDAHPS+Y G GGH ADCSHWCLAGVPDTWNQL
Sbjct: 301 LVLEKVLGTMKKPVYLLNITTLSQLRKDAHPSVY-GAGGHRNADCSHWCLAGVPDTWNQL 359
Query: 344 LYATLVRS 351
LYATL+++
Sbjct: 360 LYATLIQN 367
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356567386|ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255637255|gb|ACU18958.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356566157|ref|XP_003551301.1| PREDICTED: uncharacterized protein LOC100785226 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356567745|ref|XP_003552077.1| PREDICTED: uncharacterized protein LOC100810868 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356553583|ref|XP_003545134.1| PREDICTED: uncharacterized protein LOC100799085 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.911 | 0.842 | 0.556 | 2.9e-103 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.940 | 0.926 | 0.533 | 8.8e-102 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.914 | 0.874 | 0.552 | 8.8e-102 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.914 | 0.833 | 0.537 | 2.1e-100 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.903 | 0.883 | 0.562 | 3.2e-97 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.905 | 0.873 | 0.513 | 1.6e-95 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.934 | 0.815 | 0.482 | 7.5e-89 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.894 | 0.828 | 0.402 | 4.9e-69 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.834 | 0.736 | 0.454 | 6.3e-69 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.917 | 0.663 | 0.401 | 3.5e-68 |
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 182/327 (55%), Positives = 225/327 (68%)
Query: 23 SKGCDIFQGSWVHDETYPLYDASTDCPFIEKQFDCQKNGRPDKDYLKYRWQPTGCNLPRF 82
+ GC++FQG WV D +YP YD+S CPFI+ +FDC K GRPDK +LKY WQP C +PRF
Sbjct: 58 ASGCNLFQGRWVFDASYPFYDSSK-CPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRF 116
Query: 83 NGRDFLLRHQGKSILFVGDSLSLNQWQSLTCMLHKAVPESKYQLTRVGDLSTFTFLRFNT 142
+G FL +++GK ++FVGDSLSLN W+SL CM+H +VP +K + LST TF +
Sbjct: 117 DGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLSTLTFQEYGV 176
Query: 143 QVMFSRKPFLVDLVKTSAGRVLKLGSTESGA-LWKDKDVLIFNTWHWWLHSGRKQEWDYI 201
+ R P++VD+ K GRVL LG+ E GA WK+ DVL+FN+WHWW H G+ Q WDYI
Sbjct: 177 TLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHKGQSQGWDYI 236
Query: 202 EDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGHSNATK 261
DGS +RDMNRL AF K L+TWA+WVD N+D KT+VF+QG+SP H W T
Sbjct: 237 RDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWNEPRKT- 295
Query: 262 DCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVG 321
C + QP G Y G P + VV KV+S+M KPV LL +T LSQLRKDAHPS YGG G
Sbjct: 296 -CSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDAHPSSYGGDG 354
Query: 322 GHMEADCSHWCLAGVPDTWNQLLYATL 348
G DCSHWCL G+PDTWNQLLYA L
Sbjct: 355 G---TDCSHWCLPGLPDTWNQLLYAAL 378
|
|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-138 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-100 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-28 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 398 bits (1025), Expect = e-138
Identities = 174/335 (51%), Positives = 219/335 (65%), Gaps = 12/335 (3%)
Query: 26 CDIFQGSWVHDETYPLYDASTDCP-FIEKQFDCQKNGRPDKDYLKYRWQPTGCNLPRFNG 84
C +F G+WV D++YPLY +S DCP I+ +F+CQ GRPD DYLKYRWQP C LPRFNG
Sbjct: 53 CALFVGTWVRDDSYPLYQSS-DCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNG 111
Query: 85 RDFLLRHQGKSILFVGDSLSLNQWQSLTCMLHKAVPESKYQLTRVGDLSTFTFLRFNTQV 144
+FLL+ +GK+++FVGDSL NQW+SL C++ +VP ++ Q++R LSTF FL + +
Sbjct: 112 LEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSI 171
Query: 145 MFSRKPFLVDLVKTSAGRVLKLGSTESGA-LWKDKDVLIFNTWHWWLHSGRKQEWDYIED 203
F + P+LVD+ RVLKL A W+D DVLIFNT HWW H G Q WDYIE
Sbjct: 172 SFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIES 231
Query: 204 GSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSW--GHSNATK 261
G +DM+RLVA EKAL TWA WVD N+D ++T+VF+Q +SP H N + W G S TK
Sbjct: 232 GGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTTK 291
Query: 262 DCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGG-- 319
+C ET P G Y P VV++VI M P +LL +T+LS+LRKD HPSIY G
Sbjct: 292 NCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDL 351
Query: 320 -----VGGHMEADCSHWCLAGVPDTWNQLLYATLV 349
ADCSHWCL G+PDTWNQL Y L
Sbjct: 352 SPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.88 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 97.2 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 97.03 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 96.96 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 96.2 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 96.02 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 95.08 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 94.59 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 91.32 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 88.83 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 88.27 | |
| cd01844 | 177 | SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG | 88.16 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 86.79 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 82.48 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 81.86 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 81.64 | |
| cd01835 | 193 | SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG | 80.52 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-114 Score=840.07 Aligned_cols=328 Identities=52% Similarity=1.040 Sum_probs=302.3
Q ss_pred CCCCcccCccCCcccCCCCCCCCCCCCCC-CcccCcccccCCCCCCccccceeecCCCCCCCCChHHHHHHHcCCeEEEE
Q 018724 21 GESKGCDIFQGSWVHDETYPLYDASTDCP-FIEKQFDCQKNGRPDKDYLKYRWQPTGCNLPRFNGRDFLLRHQGKSILFV 99 (351)
Q Consensus 21 ~~~~~Cd~~~G~WV~d~~~p~Y~~~~~Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~Lprfd~~~fl~~lrgk~i~FV 99 (351)
..+++||+|+|+||+|+++|+|+++ +|| +|++++||++|||||++|++|||||++|+||||||.+||++||||||+||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~-~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSS-DCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCC-CCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 4567899999999999999999998 999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHhhhhcCCCCceeEeecCceeeEEEeecCeEEEEEecccccccccccCCceeeeccCCcC-CCCCCc
Q 018724 100 GDSLSLNQWQSLTCMLHKAVPESKYQLTRVGDLSTFTFLRFNTQVMFSRKPFLVDLVKTSAGRVLKLGSTESG-ALWKDK 178 (351)
Q Consensus 100 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~~~~~-~~~~~~ 178 (351)
||||+|||||||+|||++++++..+....+++..+|+|++||+||+||||||||+.+..+..+.|+||+++.. +.|.++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999999887655556677789999999999999999999999887666789999999865 889999
Q ss_pred cEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCCCC
Q 018724 179 DVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGHSN 258 (351)
Q Consensus 179 DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~g~ 258 (351)
|||||||||||.+.+...+++|++.|+..+++|++.+||++||+||++||++++++.+++|||||+||+||+||+||+|+
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 99999999999999988899999999998999999999999999999999999988999999999999999999999985
Q ss_pred C--CCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCCCceEEeeccccccccccCCCCcccCCC-------CCCCCCcc
Q 018724 259 A--TKDCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVG-------GHMEADCS 329 (351)
Q Consensus 259 ~--~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~-------~~~~~DC~ 329 (351)
+ +|+|+++|+|+.++++.+....+++++++++++++.+|++||||+||++|||||||+|+... ...++||+
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~ 366 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS 366 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence 2 46899999999977776666667789999999999999999999999999999999996421 13578999
Q ss_pred ccccCCchHHHHHHHHHHHh
Q 018724 330 HWCLAGVPDTWNQLLYATLV 349 (351)
Q Consensus 330 HWClPG~~DtWn~lL~~~L~ 349 (351)
||||||||||||||||++|+
T Consensus 367 HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 367 HWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCCCccHHHHHHHHHh
Confidence 99999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 8e-05
Identities = 56/356 (15%), Positives = 102/356 (28%), Gaps = 93/356 (26%)
Query: 9 KLLLLLLSL------VVHGESKGCDIFQG-SWVHDETYPLYDASTDCPFIEKQF-----D 56
KL LL L ++ G G G +WV + C K F +
Sbjct: 139 KLRQALLELRPAKNVLIDG-VLGS----GKTWVALDV--CLSYKVQCKMDFKIFWLNLKN 191
Query: 57 CQKNGRPDKDY-----LKYRWQPTGCNLPRFNGRDFLLRHQGKSILFVGDSLSLNQWQSL 111
C P+ L Y+ P + + L H ++ L L
Sbjct: 192 CN---SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL----RRLLKSKPYE 244
Query: 112 TCMLHKAVPESKYQLTRVGDLSTFTFLRFNTQVMF-SRKPFLVDLVKTSAGRVLKLGSTE 170
C+L V L V + + + +++ +R + D + + + L
Sbjct: 245 NCLL---V------LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 171 SGALWKDKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLV------AFEKALNTW 224
L D+ + + L +D R + N + L TW
Sbjct: 296 MT-LTPDEVKSLLLKY---LDCR-------PQDLPREVLTTNPRRLSIIAESIRDGLATW 344
Query: 225 AKWVDANID--------------PTKTKVFYQ--GVSPDHTNATS------WGHSNATKD 262
W N D P + + + V P + + W D
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF------D 398
Query: 263 CREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQLRKDA--HPSI 316
+ + +K + S +VEK + + + + + +L + H SI
Sbjct: 399 VIKSDVMVVVNKLHKYS-----LVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.55 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 95.48 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 95.2 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 84.62 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.55 E-value=6.1e-05 Score=65.44 Aligned_cols=91 Identities=13% Similarity=0.113 Sum_probs=54.8
Q ss_pred CccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 018724 177 DKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGH 256 (351)
Q Consensus 177 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~ 256 (351)
.+|+||++.|..=.. ...+.|+..|+++++.+.+. .++++++|-+..|...... .
T Consensus 74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~~--~- 128 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGEG--M- 128 (200)
T ss_dssp CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESGG--G-
T ss_pred CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccccc--c-
Confidence 479999999964110 01356888888888887653 3567899999888653210 0
Q ss_pred CCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCCCceEEeecccccc
Q 018724 257 SNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQ 307 (351)
Q Consensus 257 g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdit~ls~ 307 (351)
.. .. .........+++++++.++ .++.++|++..+.
T Consensus 129 -----~~---~~-----~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~ 164 (200)
T 4h08_A 129 -----KE---FA-----PITERLNVRNQIALKHINR--ASIEVNDLWKVVI 164 (200)
T ss_dssp -----CE---EC-----THHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred -----cc---cc-----hhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence 00 00 0000012235667777666 3599999987654
|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.25 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.09 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 84.69 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.25 E-value=0.00027 Score=59.55 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=48.1
Q ss_pred CCccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCC
Q 018724 176 KDKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWG 255 (351)
Q Consensus 176 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 255 (351)
...|+||+..|.-= ....+ ....+.|+..++++++-+.+ ....+++-+..| ++..
T Consensus 70 ~~~D~vvi~~G~ND----------~~~~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~---- 124 (208)
T d2o14a2 70 KPGDYFMLQLGIND----------TNPKH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD---- 124 (208)
T ss_dssp CTTCEEEEECCTGG----------GCGGG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC----
T ss_pred CCCCEEEEEcCCCc----------ccccc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc----
Confidence 44699999988431 11000 11246788888888887644 234455544333 2111
Q ss_pred CCCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCCCceEEeecccccc
Q 018724 256 HSNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQ 307 (351)
Q Consensus 256 ~g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdit~ls~ 307 (351)
........+ .....+.+++++.++. .+.++|++.++.
T Consensus 125 -----~~~~~~~~~--------~~~~~~~~~~~~a~~~--~v~~vD~~~~~~ 161 (208)
T d2o14a2 125 -----FTSEGIHSS--------VNRWYRASILALAEEE--KTYLIDLNVLSS 161 (208)
T ss_dssp -----BCTTSCBCC--------TTSTTHHHHHHHHHHT--TCEEECHHHHHH
T ss_pred -----cccccchHH--------HHHHHHHHHHHhhccC--CcEEeccHHHHH
Confidence 000001011 1122356677776664 588999887763
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|