Citrus Sinensis ID: 018766
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| 255538514 | 339 | conserved hypothetical protein [Ricinus | 0.962 | 0.994 | 0.637 | 1e-119 | |
| 225458432 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.974 | 0.613 | 1e-116 | |
| 356510304 | 356 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.960 | 0.566 | 1e-111 | |
| 449476766 | 345 | PREDICTED: uncharacterized LOC101207359 | 0.885 | 0.898 | 0.639 | 1e-111 | |
| 356519084 | 356 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.957 | 0.567 | 1e-110 | |
| 449460131 | 345 | PREDICTED: uncharacterized protein LOC10 | 0.885 | 0.898 | 0.636 | 1e-110 | |
| 297847108 | 331 | hypothetical protein ARALYDRAFT_473986 [ | 0.945 | 1.0 | 0.580 | 1e-107 | |
| 255647675 | 356 | unknown [Glycine max] | 0.974 | 0.957 | 0.550 | 1e-106 | |
| 15221197 | 340 | uncharacterized protein [Arabidopsis tha | 0.971 | 1.0 | 0.586 | 1e-105 | |
| 8778686 | 343 | T1N15.7 [Arabidopsis thaliana] | 0.971 | 0.991 | 0.581 | 1e-104 |
| >gi|255538514|ref|XP_002510322.1| conserved hypothetical protein [Ricinus communis] gi|223551023|gb|EEF52509.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/350 (63%), Positives = 269/350 (76%), Gaps = 13/350 (3%)
Query: 3 MEVQSVCRGLQLPKFKSSNCGFLSHQFVSPSASQFGSRSQSIRFGNAYKWYSAWSSKRGA 62
ME+QSVC GL PK + L+H+ S ++ S++ G A K Y + S+KR
Sbjct: 1 MELQSVCHGLTAPKLR------LTHRL-----SSHQHQTVSLKIGIASKSYLSSSNKRVT 49
Query: 63 ILCASNSGSDTK-LGFPSGENSSLPVAIFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSA 121
I +S++ S L E + +P A FN EPFRGKSGS+SF GLTHQ VE GKL+SA
Sbjct: 50 IRASSSNSSRNTNLELSDREGTGVPDASFNELEPFRGKSGSISFYGLTHQSVEAGKLVSA 109
Query: 122 PFQ-EDKGSFLWILAPVVLISSLILPQMFLGNVIEDFIKDNLLMEIVSSLTFESMFYVGL 180
PF ED GSFLWIL P LI+SL +PQ F+ NVIE F+KD +L+EIV+SL+ E+MFY+GL
Sbjct: 110 PFNGEDNGSFLWILGPAALIASLFIPQFFISNVIEAFLKDEILVEIVASLSSEAMFYIGL 169
Query: 181 AIFLRITDRVQRPYLQFSPKRWGLITGLRGYLTSAFFTTGLKVVAPLFAVYVTWPVLRLP 240
+IFL +TDRVQRP+LQFSPKRWGLITGL+GYLTSAFF G KV+APLF VY TWPVLRLP
Sbjct: 170 SIFLLVTDRVQRPFLQFSPKRWGLITGLKGYLTSAFFIMGFKVIAPLFIVYATWPVLRLP 229
Query: 241 ALVAVLPFLVGCAAQLAFETNLDKRGSSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMK 300
ALVAVLPFLVGC AQ FE LD+ GSSCWP++PIIFEVYR+YQLSKAA+FIE+LMFSM+
Sbjct: 230 ALVAVLPFLVGCIAQRVFEIRLDQLGSSCWPIVPIIFEVYRIYQLSKAAHFIEKLMFSMR 289
Query: 301 DLPRSPELLERGSAMVSMVVIFQILGVVCLWSLLTFLLRLFPSRPVAENY 350
LP S +LLER +A+++M+V FQ LGV+CLWSLLTF LRLFPSRPVAENY
Sbjct: 290 GLPESVQLLERNNALIAMIVTFQFLGVLCLWSLLTFFLRLFPSRPVAENY 339
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458432|ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245429 [Vitis vinifera] gi|302142414|emb|CBI19617.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356510304|ref|XP_003523879.1| PREDICTED: uncharacterized protein LOC100805065 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449476766|ref|XP_004154828.1| PREDICTED: uncharacterized LOC101207359 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356519084|ref|XP_003528204.1| PREDICTED: uncharacterized protein LOC100780682 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449460131|ref|XP_004147799.1| PREDICTED: uncharacterized protein LOC101207359 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297847108|ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata] gi|297337277|gb|EFH67694.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|255647675|gb|ACU24299.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|15221197|ref|NP_175279.1| uncharacterized protein [Arabidopsis thaliana] gi|56381889|gb|AAV85663.1| At1g48460 [Arabidopsis thaliana] gi|57222220|gb|AAW39017.1| At1g48460 [Arabidopsis thaliana] gi|332194175|gb|AEE32296.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|8778686|gb|AAF79694.1|AC020889_2 T1N15.7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| TAIR|locus:2198070 | 340 | AT1G48460 "AT1G48460" [Arabido | 0.971 | 1.0 | 0.517 | 3.8e-85 | |
| TAIR|locus:2166330 | 366 | AT5G63040 "AT5G63040" [Arabido | 0.648 | 0.620 | 0.294 | 8.7e-24 |
| TAIR|locus:2198070 AT1G48460 "AT1G48460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 180/348 (51%), Positives = 225/348 (64%)
Query: 3 MEVQSVCRGLQLPKFKSSNCGFLSHQFVSPSASQFGSRSQSIRFGNAYKWYSAWSSKRGA 62
ME +++C G P+ + S+ LS P++S F +R + + W S R
Sbjct: 1 MESKAICLGFLPPRLRFSSPRLLSLPPSPPASSTFATRHK-LDSRQTLLWNKPQLS-RVR 58
Query: 63 ILCASNSGSDTKLGFPSGENSSLPVAIFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSAP 122
+ C+S S SD++ + S+ A E FRGKSGSVSF GLTHQLVEE KL+SAP
Sbjct: 59 VACSS-SQSDSRPEKKQSDKSNYARA-----ELFRGKSGSVSFNGLTHQLVEESKLVSAP 112
Query: 123 FQEDKGSFLWILAPVVLISSLILPQMFLGNVIEDFIKDNLLMEIVSSLTFESMFYVGLAI 182
FQE+KGSFLW+LAPVVLISSLILPQ FL +IE K++ + EIV+S FE++FY GLAI
Sbjct: 113 FQEEKGSFLWVLAPVVLISSLILPQFFLSGIIEATFKNDTVAEIVTSFCFETVFYAGLAI 172
Query: 183 FLRITDRVQRPYLQFSPKRWGLITGLRGYLTSAFFTTGLKVVAPLFAVYVTWXXXXXXXX 242
FL +TDRVQRPYL FS KRWGLITGLRGYLTSAF T GLKVV P+FAVY+TW
Sbjct: 173 FLSVTDRVQRPYLDFSSKRWGLITGLRGYLTSAFLTMGLKVVVPVFAVYMTWPALGIDAL 232
Query: 243 XXXXXXXXGCAAQLAFETNLDKRGSSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMKDL 302
GCA Q FE L++RGSSCWP++PI+FEVYRLYQ+++AA F++RLMF MKD
Sbjct: 233 IAVLPFLVGCAVQRVFEARLERRGSSCWPIVPIVFEVYRLYQVTRAATFVQRLMFMMKDA 292
Query: 303 PRSPELLERGSAMVSMVVIFQILGVVCXXXXXXXXXXXXXXXXVAENY 350
+ E+ ERG A+V +VV Q L V+C V ENY
Sbjct: 293 ATTAEITERGVALVGLVVTLQFLAVMCLWSFITFLMRLFPSRPVGENY 340
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| TAIR|locus:2166330 AT5G63040 "AT5G63040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 350 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 54.5 bits (130), Expect = 3e-08
Identities = 51/354 (14%), Positives = 94/354 (26%), Gaps = 118/354 (33%)
Query: 50 YKW-YSAWSSKRGAILCASNSGSDTKLGFPSGENSSLPVAIFNGPEPFRGKSGSVSFCGL 108
YK+ S ++ S + + ++N + F +VS
Sbjct: 91 YKFLMSPIKTE-------QRQPSMMTRMYIEQRDR-----LYNDNQVFA--KYNVSRLQP 136
Query: 109 THQLVEEGKLMSAPFQEDKGSFL--------WILAPVVLISSLILPQMF-------LGNV 153
+L + L+ + K + +A V +S + +M L N
Sbjct: 137 YLKLRQ--ALLEL--RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 154 IEDFIKDNLLMEIVSSL--TFESMFYVGLAIFLRITDRVQ------RPYLQFSPKRWGLI 205
++E++ L + + I R+ R L+ P L+
Sbjct: 193 NSP----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 206 TGLR----GYLTSAF-------FTTGLKVVA--------------------------PLF 228
L +AF TT K V L
Sbjct: 249 V-LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 229 AVYVTWPVLRLPALV-AVLPFLVG-CAAQLAFETNLDKRGSSCWPLIPIIFEVYRLYQLS 286
Y+ LP V P + A + + G + W + ++
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESI-------RDGLATW-------DNWKHVNCD 353
Query: 287 KAANFIERLMFSMKDLPRSPELLERGSAMVSMVVIF--------QILGVVCLWS 332
K IE S+ L P + M + +F +L + +W
Sbjct: 354 KLTTIIES---SLNVL--EPAEYRK---MFDRLSVFPPSAHIPTILLSL--IWF 397
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00