Citrus Sinensis ID: 018804

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPKISQGEP
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEEcHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHcHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccHHHccccccccccc
Coil and Loop (DISEMBL)
mkpsslhnvylrFKPLLLMVLAQLSYTFLYFITEasfnhgmnphvYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTvykgpaarnpghppihiqrnniIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVArkpadwriglNIDLWSTIYGGVVVSGLIVFIQLWctdkrgpvfatmfnPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLwgkegdhqeaqiktkeqsdpkisqgep
Flexible Loop (DISEMBL)
MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQiktkeqsdpkisqgep
Low Complexity Region (SEG)
MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPtfvasvvntvaavtfviavvLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFlgsivgavvvigglylllwgKEGDHQEAQIKTKEQSDPKISQGEP
Disordered region (IsUnstruct)
******HNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK************************
Disordered Region (DISOPRED)
***********RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP*********IQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG*************************
Disordered Region (DISEMBL)
MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGD*********************
Disordered Region (DISPRO)
*****LHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG*************EQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPKISQGEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
O80638	374	WAT1-related protein At2g	yes	no	0.945	0.885	0.408	5e-73
Q9FL41	402	WAT1-related protein At5g	no	no	0.988	0.860	0.380	1e-72
Q501F8	373	WAT1-related protein At4g	no	no	0.937	0.879	0.391	5e-72
Q9LPF1	370	WAT1-related protein At1g	no	no	0.968	0.916	0.395	3e-71
Q9SUF1	384	WAT1-related protein At4g	no	no	0.954	0.869	0.363	5e-67
F4HZQ7	389	WAT1-related protein At1g	no	no	0.937	0.843	0.351	7e-66
Q9LV20	383	WAT1-related protein At3g	no	no	0.934	0.853	0.366	2e-63
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.948	0.853	0.356	3e-63
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.962	0.886	0.353	5e-63
F4IJ08	394	WAT1-related protein At2g	no	no	0.911	0.809	0.342	8e-63

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  275 bits (702), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 208/335 (62%), Gaps = 4/335 (1%)

Query: 13  FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK 72
           +KP + +V  Q  Y  L  I + + N GM+PHV  +YRHIVA I + PFAYFL+RKIRPK
Sbjct: 6   WKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPK 65

Query: 73  LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLD 132
           +TL++F +I +L L+  T+  N+Y+  ++YTS TF A++ N + A  F++A + RLE ++
Sbjct: 66  MTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVN 125

Query: 133 LRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQR---NNIIQEQWLKGSFL 189
           ++     AK+LGT+V++ G  +MTV KGP    P   P  I +   N  +++   KG+ L
Sbjct: 126 VKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASL 185

Query: 190 TIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLN 248
                I W+    +QAITLK YP +LSLT ++CFLG+ +S +  + + R  P+ W I L+
Sbjct: 186 IAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLD 245

Query: 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGS 308
             L + +YGGV+ SG+  ++Q      RGPVF T FNP+S ++VAIL   +  E +FLG 
Sbjct: 246 SKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLGR 305

Query: 309 IVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDP 343
           I+GA+V++ GLY +LWGK  D   +     ++  P
Sbjct: 306 ILGAIVIVLGLYSVLWGKSKDEPSSSFSDMDKELP 340

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 226/371 (60%), Gaps = 25/371 (6%)

Query: 4   SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAY 63
           SS  +     KP   M+  Q  Y  +  IT+ S N GM+ +V V YRH +A   + PFA+
Sbjct: 7   SSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAF 66

Query: 64  FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIA 123
           F ERK +PK+T ++F+++F+L L+G  +  N Y+  L+YTSPTF  ++ N + A+TF++A
Sbjct: 67  FFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILA 126

Query: 124 VVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNN------ 177
           V+ R+E LDL+     AK+ GT+V++AG  +MT+YKGP         +HIQ ++      
Sbjct: 127 VLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTS 186

Query: 178 ----IIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPA-QLSLTTWMCFLGAAQSAVF 232
                  +++LKGS L I +++ W++++++QA  LK Y   QLSLTT +CF+G  Q+   
Sbjct: 187 SKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAV 246

Query: 233 TVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILV 292
           T ++   P+ WRIG +++L +  Y G+V S +  ++Q     KRGPVFAT F+P+  ++V
Sbjct: 247 TFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIV 306

Query: 293 AILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQ---------EAQIKTKEQ--- 340
           A++  FV  EK+FLG ++GAV+++ GLY +LWGK+ ++Q         ++  K  E    
Sbjct: 307 AVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVTICELAKIDSNSKVTEDVEA 366

Query: 341 --SDPKISQGE 349
             S  KIS+G+
Sbjct: 367 NGSKMKISEGD 377

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  271 bits (694), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 206/337 (61%), Gaps = 9/337 (2%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
           + KP++ ++  Q  Y  +Y IT  SF HGMN  +  TYRH+VA I + PFA  LERKIRP
Sbjct: 8   KLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRP 67

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
           K+T  LFL I  L  +   L  N+Y+  ++ TS T+ ++ VN + A+TF++AV+ R+ET+
Sbjct: 68  KMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETV 127

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--NPGHPPIHIQRNNIIQE----QWLK 185
           +L+  R +AKV+GT +++ G  +MT+YKGPA       H  +H   +    E     W+ 
Sbjct: 128 NLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVT 187

Query: 186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRI 245
           G+   + S  TW+  +I+Q+ TLK+YPA+LSL  W+C +G   + + ++I+ R  + W++
Sbjct: 188 GTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAWKV 247

Query: 246 GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLF 305
           G++    + +Y GVV SG+  +IQ     +RGPVF T F+P+  I+ A L   V  EK+ 
Sbjct: 248 GMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKIH 307

Query: 306 LGSIVGAVVVIGGLYLLLWGKEGDH---QEAQIKTKE 339
           LGSI+GA+ ++ GLY ++WGK  D     E +I  +E
Sbjct: 308 LGSIIGAIFIVFGLYSVVWGKAKDEVISVEEKIGMQE 344

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 212/349 (60%), Gaps = 10/349 (2%)

Query: 1   MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFP 60
           MK  S+     + KP+L ++  Q  Y  +Y IT  SF HGM+  V  TYRH+VA + M P
Sbjct: 1   MKGGSME----KIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAP 56

Query: 61  FAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTF 120
           FA   ERKIRPK+TLA+F  +  L ++   +  N+Y+  L+ TS ++ ++  N + AVTF
Sbjct: 57  FALMFERKIRPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTF 116

Query: 121 VIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--NPGHPPIHIQRNNI 178
           ++A++ RLET++ R    +AKV+GT++++ G  IMT+YKGPA       H   H   ++ 
Sbjct: 117 ILALIFRLETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSST 176

Query: 179 -IQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVA 237
              + W+ G+   + S  TW+A +I+Q+ TLK YPA+LSL T +C +G   +A+ ++I+ 
Sbjct: 177 PTGQHWVLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMV 236

Query: 238 RKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAY 297
           R P+ W+IG++    + +Y GVV SG+  +IQ     +RGPVF T F+P+  I+ A L  
Sbjct: 237 RDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGA 296

Query: 298 FVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH---QEAQIKTKEQSDP 343
            V  EK+ LGSI+GAV ++ GLY ++WGK  D     + +I  K Q  P
Sbjct: 297 LVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKDEVNPLDEKIVAKSQELP 345

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  254 bits (650), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 203/352 (57%), Gaps = 18/352 (5%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
           + +P LLM+  Q      Y +  A+ N G N +V + YR++VA + + PFA   ERK+RP
Sbjct: 10  KLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRP 69

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
           K+TL++  +I  L  +   L     +  +  TS T+ ++++N + +VTF+IA +LR+E +
Sbjct: 70  KMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKV 129

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRN---NIIQEQ--WLKG 186
           ++   R  AK++GTLV L G  +MT+YKGP    P   P   Q+N   N  Q+   W+ G
Sbjct: 130 NIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVG 189

Query: 187 SFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIG 246
           + L +   + WS  Y++Q+IT+K YPA LSL+  +C  GA QS    ++V R P+ W +G
Sbjct: 190 TLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVG 249

Query: 247 LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFL 306
            +  L++ +Y G+V SG+  ++Q      RGPVF T FNP+  ILVA++A F+  E++  
Sbjct: 250 WDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHF 309

Query: 307 GSIVGAVVVIGGLYLLLWGKEGDH-------------QEAQIKTKEQSDPKI 345
           G ++G  V+  GLY+++WGK  D+             QE  I TK + D K+
Sbjct: 310 GCVIGGAVIAAGLYMVVWGKGKDYEVSGLDILEKNSLQELPITTKSEDDNKL 361

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  251 bits (640), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 197/344 (57%), Gaps = 16/344 (4%)

Query: 13  FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK 72
            KP L M+  Q  Y  +Y IT  S  HGMN +V   YRH +A   + PFA F ERKIRPK
Sbjct: 9   LKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPK 68

Query: 73  LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLD 132
           +T  +FL+I +L  +   L  N+Y+  + YTS TF ++  N + A+TFV+A++ RLE+++
Sbjct: 69  MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVN 128

Query: 133 LRNARGMAKVLGTLVSLAGVTIMTVYKGP------------AARNPGHPPIHIQRNNIIQ 180
            +  R +AKV+GT+++++G  +MT+YKGP               +             + 
Sbjct: 129 FKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMD 188

Query: 181 EQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKP 240
           + W+ G+ + +  +  W+  +I+Q+ TLK+YPA+LSLTT +C +G  +    +++  R  
Sbjct: 189 KHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDL 248

Query: 241 ADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVF 300
           + W+IG + +L++  Y GV+ SG+  ++Q     +RGPVF   FNP+  ++ A L   V 
Sbjct: 249 SAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVL 308

Query: 301 GEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPK 344
            E + LGS++G + +I GLY ++WGK  D +     T +  D K
Sbjct: 309 SESIHLGSVIGTLFIIVGLYTVVWGKGKDKR----MTDDDEDCK 348

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  243 bits (619), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 124/338 (36%), Positives = 210/338 (62%), Gaps = 11/338 (3%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
           + K ++ ++  Q  +   + ++  + N G++  VY  YR+++A + + PFAYF E+K RP
Sbjct: 32  KVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERP 91

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
            LT++L  + F L+L+G+T     Y   L Y +PTF +++ N+V A+TF++A  LRLE +
Sbjct: 92  PLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHI 151

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNII----QEQWLKGS 187
           DL    G+AKVLGTLVS+ G T++T+Y+G    + G   +++Q+  ++          G 
Sbjct: 152 DLVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQG---LNMQKEEVVGSDNSHSLTLGW 208

Query: 188 FLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247
              +   ++W+   ++QA  LK+YPA+L+LT++ CF G  Q  V  + V     +W I  
Sbjct: 209 LYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVS 268

Query: 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLG 307
             +L++ +Y G++ SGL+V++Q WC  K GPVF  +F P+ T+LVA +A+ + G++L+ G
Sbjct: 269 WEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSG 328

Query: 308 SIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKE-QSDPK 344
            IVGAV ++ GLYL+LWGK   ++E ++  +E Q DP+
Sbjct: 329 GIVGAVFIMLGLYLVLWGK---NEERKLALEESQQDPE 363

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  242 bits (618), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 198/342 (57%), Gaps = 10/342 (2%)

Query: 5   SLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYF 64
           SL  V  + +  + M+  Q  Y   + ++ A+ N G++  V+  YR+I+A + + PFAYF
Sbjct: 10  SLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYF 69

Query: 65  LERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAV 124
           LE+K RP +TL   ++ F L+L+G+T     Y   L  TSPTF +S+ N+V A+TF++A 
Sbjct: 70  LEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAA 129

Query: 125 VLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG-HPPIHIQR-------- 175
           +LR+E + +    G++K+LGT + +AG +++T+YKGP    P  H   H+          
Sbjct: 130 LLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAP 189

Query: 176 -NNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTV 234
             N   + W  G    I   ++WS   + QA  LK YPA+LS+T++ CF G  Q  +   
Sbjct: 190 LGNAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAA 249

Query: 235 IVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAI 294
              R    W      +L++ +Y G+V SG+   +Q+WC D+ GPVF  ++ PV T++VAI
Sbjct: 250 FCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAI 309

Query: 295 LAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIK 336
           +A    GE+ +LG I+GAV++I GLY +L+GK  + + A ++
Sbjct: 310 MASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAALE 351

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  241 bits (616), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 127/359 (35%), Positives = 209/359 (58%), Gaps = 22/359 (6%)

Query: 1   MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFP 60
           M+     +   + +P + MV+ Q+    +  +++A  N GM+ +V V YRH VA I M P
Sbjct: 1   MEEVKKRDCMEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAP 60

Query: 61  FAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTF 120
           FA++ ++K+RPK+TL +F +I +L L+   +  N+Y+  ++YT+ TF  ++ N + A+TF
Sbjct: 61  FAFYFDKKVRPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITF 120

Query: 121 VIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGP----------AARNPGHPP 170
           V+A +  LE + LR  R   KV+GTL ++ G  IMT+ KGP          +A N     
Sbjct: 121 VLAYIFGLERVKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTD 180

Query: 171 IHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQ-S 229
           IH           +KG+ L      +++   I+QAITL+ YPA+LSLT W+C +G  + +
Sbjct: 181 IH---------SAIKGAVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGT 231

Query: 230 AVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVST 289
           AV  V+    P+ W IG +  L +  Y G+V S L  ++       RGPVF T F+P+  
Sbjct: 232 AVALVMEKGNPSAWAIGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCM 291

Query: 290 ILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQ-EAQIKTKEQS-DPKIS 346
           I+VAI++  +F E+++LG ++GAVV+  GLYL++WGK  D++  + ++  ++S  PK+ 
Sbjct: 292 IIVAIMSTIIFAEQMYLGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLE 350

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  241 bits (614), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 203/333 (60%), Gaps = 14/333 (4%)

Query: 14  KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL 73
           KP   MV  Q  Y  +  +T+   + GM+ +V V YR+  A  A+ PFA   ERK+R K+
Sbjct: 10  KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKM 69

Query: 74  TLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDL 133
           T  +F+ IF+L+L+G  +  N+Y+  L+ TSPTF ++V N V A+T ++A + R+E +++
Sbjct: 70  TFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEM 129

Query: 134 RNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQE------QWLKGS 187
           R  R + KV+GTLV++ G  +M  YKGP         I+  R+++          +LK +
Sbjct: 130 RKVRCLVKVMGTLVTVVGSILMIFYKGPF--------INFFRSHLTAASSPPTADYLKAA 181

Query: 188 FLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247
              + +S++W++ +++QA TLK+Y A LS++T +CF+G  QS     ++   P+   IG 
Sbjct: 182 VFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGF 241

Query: 248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLG 307
           +++L ++ Y G++ S +  ++Q     ++GPVF T FNP+  ++V+I+++FV G+ ++LG
Sbjct: 242 DMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLG 301

Query: 308 SIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQ 340
            ++G VV++ G+Y +LWGK  D    + + ++ 
Sbjct: 302 GVIGVVVLMVGVYAVLWGKHVDDDGEETRHEDN 334

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
225433049	368	PREDICTED: auxin-induced protein 5NG4 [V	0.962	0.915	0.739	1e-142
255576820	370	Auxin-induced protein 5NG4, putative [Ri	0.988	0.935	0.692	1e-137
356535430	354	PREDICTED: auxin-induced protein 5NG4 [G	0.948	0.937	0.722	1e-134
388500472	357	unknown [Medicago truncatula]	0.982	0.963	0.662	1e-131
297744123	364	unnamed protein product [Vitis vinifera]	0.962	0.925	0.667	1e-127
356533791	346	PREDICTED: LOW QUALITY PROTEIN: auxin-in	0.945	0.956	0.655	1e-123
218192100	390	hypothetical protein OsI_10035 [Oryza sa	0.965	0.866	0.605	1e-121
108706201	374	Integral membrane protein DUF6 containin	0.965	0.903	0.608	1e-121
449449012	360	PREDICTED: auxin-induced protein 5NG4-li	0.977	0.95	0.604	1e-117
326522246	381	predicted protein [Hordeum vulgare subsp	0.934	0.858	0.594	1e-116

>gi|225433049|ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296083618|emb|CBI23607.3| unnamed protein product [Vitis vinifera]

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/338 (73%), Positives = 290/338 (85%), Gaps = 1/338 (0%)

Query: 4   SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAY 63
           S L ++Y RFKP LLM LAQ  YTFLYFITEASFNHGMNPHVY+TYRHIV G+  FPFAY
Sbjct: 6   SKLSSIYRRFKPHLLMALAQFGYTFLYFITEASFNHGMNPHVYITYRHIVGGLVTFPFAY 65

Query: 64  FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIA 123
           FLERK+RPKLTLALF+E+F+LSL+GV L+LNMYFASLRYTSPTF+ASVVNT+A++TF+IA
Sbjct: 66  FLERKVRPKLTLALFVELFILSLLGVGLSLNMYFASLRYTSPTFIASVVNTIASLTFIIA 125

Query: 124 VVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQW 183
           VVLR+E LD RN RG+AKVLGTLVSLAGV  MT+YKGP  ++   P IHIQ N  I E W
Sbjct: 126 VVLRMEVLDFRNPRGIAKVLGTLVSLAGVMTMTLYKGPIMKSLWDPLIHIQGNTTIHENW 185

Query: 184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADW 243
           LKGS LT+AS +TWS  YIMQAITLKRYPAQLSLTTWM F+GAAQSAVFTV V    A W
Sbjct: 186 LKGSILTVASCVTWSIWYIMQAITLKRYPAQLSLTTWMSFIGAAQSAVFTVCVEHSRAAW 245

Query: 244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEK 303
            IG NIDLWST+Y GVV SGLI+F+QLWCT+++GPVF TMFNP+ST+LVA+LAYFV GEK
Sbjct: 246 TIGFNIDLWSTVYAGVVCSGLIIFVQLWCTEEKGPVFVTMFNPLSTVLVAVLAYFVLGEK 305

Query: 304 LFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQS 341
           L++GSI+G  +VI GLYLLLWGKEGD QEAQ+K++E+S
Sbjct: 306 LYMGSILGGAIVIVGLYLLLWGKEGD-QEAQVKSQEES 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576820|ref|XP_002529296.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223531220|gb|EEF33065.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/348 (69%), Positives = 282/348 (81%), Gaps = 2/348 (0%)

Query: 1   MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFP 60
           +K  +  ++  RF+P LLM  AQ+ YTFLY ITEASFN GMNPHVY+TYRH+VA + M P
Sbjct: 3   LKAYTCGHLCKRFRPHLLMFFAQVGYTFLYLITEASFNRGMNPHVYITYRHVVASVVMLP 62

Query: 61  FAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTF 120
            AYF ERK RPK+TLALF+EIF+LSL+GV+LTLNMY+ASLRYTSPTFVASVVNT+AA+ F
Sbjct: 63  IAYFAERKQRPKMTLALFVEIFILSLLGVSLTLNMYYASLRYTSPTFVASVVNTIAALAF 122

Query: 121 VIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNII- 179
           VIA+ LRLE+LDLRN RG+AK+LGTLVSLAGV  MT+YKGP  +N    PIHI+ N    
Sbjct: 123 VIAIALRLESLDLRNPRGLAKLLGTLVSLAGVMTMTLYKGPKMKNLSVTPIHIEGNTASN 182

Query: 180 QEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARK 239
            E WLKGS LT+AS ITWS  YIMQA+TLKRYPAQLSLT WM  +GAAQSA FTVIV  +
Sbjct: 183 HENWLKGSILTVASCITWSVWYIMQAVTLKRYPAQLSLTAWMSIVGAAQSAFFTVIVEHR 242

Query: 240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFV 299
            A W IG N+D WS +YGGVV+SG +VFIQLWCT+ +GPVF TMFNPVSTILVA++AYFV
Sbjct: 243 KAAWTIGFNVDFWSILYGGVVMSGAVVFIQLWCTEVKGPVFVTMFNPVSTILVAVIAYFV 302

Query: 300 FGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPKISQ 347
            GEKL+LGSIVGAVVVI GLYLLLWGKEGD Q  Q K+++Q D    +
Sbjct: 303 LGEKLYLGSIVGAVVVIFGLYLLLWGKEGD-QPVQSKSEDQFDSSCDE 349

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535430|ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glycine max]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/339 (72%), Positives = 289/339 (85%), Gaps = 7/339 (2%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
             KP LLMVL Q+ YTFLYFITEASFNHGM+P+VYVTYRHIVA + MFPFAYFLER  RP
Sbjct: 14  ELKPHLLMVLVQVGYTFLYFITEASFNHGMSPYVYVTYRHIVAAVVMFPFAYFLERNARP 73

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
           KLT ALF+EIFVLSL+GV++TLNMYFASL+YT+PTFVAS++NT+A++TF+IAV LR E L
Sbjct: 74  KLTFALFMEIFVLSLLGVSVTLNMYFASLKYTNPTFVASMINTIASLTFIIAVALRFEVL 133

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ-RNNIIQEQWLKGSFLT 190
           DLRN RG+AKV+GT++SLAGV IMT+YKGP  RN  HP IHI  ++  I E WLKGS LT
Sbjct: 134 DLRNPRGIAKVIGTIISLAGVLIMTLYKGPVMRNLWHPLIHIPGKSAAINEDWLKGSILT 193

Query: 191 IASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNID 250
           ++S +TWS  YIMQA TLKRYPAQLSLTTWM F+GAAQSA FTVIV    + W IGLN+D
Sbjct: 194 VSSCVTWSLWYIMQASTLKRYPAQLSLTTWMSFVGAAQSAAFTVIVEHNSSAWTIGLNVD 253

Query: 251 LWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIV 310
           LWSTIYGGVVV+GLI++IQLWCT+K+GPVF T+FNP+STILVAILAYFVFGEKL+LGSI+
Sbjct: 254 LWSTIYGGVVVAGLIIYIQLWCTEKKGPVFVTVFNPLSTILVAILAYFVFGEKLYLGSII 313

Query: 311 GAVVVIGGLYLLLWGKEGDHQEAQIKTKEQS-----DPK 344
           GA++VI GLY LLWGKEGD QE  +KTK++S     DP+
Sbjct: 314 GAIIVIIGLYFLLWGKEGD-QEVYMKTKDKSQCSTVDPE 351

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500472|gb|AFK38302.1| unknown [Medicago truncatula]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/347 (66%), Positives = 280/347 (80%), Gaps = 3/347 (0%)

Query: 5   SLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYF 64
           SL  VY  FKP LLMVL Q+ YT ++FIT+ASFNHGM+P+VYVTYRH+VAGIAMFPFAYF
Sbjct: 7   SLLLVYREFKPHLLMVLTQVGYTLIFFITQASFNHGMSPYVYVTYRHVVAGIAMFPFAYF 66

Query: 65  LERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAV 124
           LER  RPKLT AL +EIFVLS +G++L++N+YFASL+YTSPTF+AS+ NT+A++TF+IAV
Sbjct: 67  LERSARPKLTFALLVEIFVLSALGISLSINLYFASLKYTSPTFLASMYNTIASLTFIIAV 126

Query: 125 VLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNI-IQEQW 183
            LR E +DLRN RG AKVLGTL+SLAGV  MT+YKGP  RN   P IHIQ+ +    E W
Sbjct: 127 ALRFEVIDLRNPRGTAKVLGTLISLAGVMTMTLYKGPIMRNLWGPLIHIQQKSASTHESW 186

Query: 184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPAD 242
           LKGS +TI+  +T S  YIMQA TLKRYPAQLSLTTWMCF+GA QSAVFT+IV    P+ 
Sbjct: 187 LKGSLVTISCCVTTSIGYIMQASTLKRYPAQLSLTTWMCFMGAVQSAVFTIIVEHDNPSA 246

Query: 243 WRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGE 302
           W IG NIDLWS +YGG+ V+GL+ +IQLWCT+K+GPVF T+FNP+STI VAILAYFV GE
Sbjct: 247 WIIGFNIDLWSILYGGIFVAGLLTYIQLWCTEKKGPVFVTVFNPLSTIFVAILAYFVLGE 306

Query: 303 KLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPKISQGE 349
             +LGS++GA +VI GLYLLLWGKEGD +E  +KTK+ +  +  Q E
Sbjct: 307 NFYLGSLIGAFIVIMGLYLLLWGKEGD-KEIDLKTKQCNSSENQQLE 352

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744123|emb|CBI37093.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/340 (66%), Positives = 266/340 (78%), Gaps = 3/340 (0%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
           RFKP LLMVL    YT LYF  EA+FNHG+NPHV VTYRH + G+ MFPFAY LERK+RP
Sbjct: 20  RFKPHLLMVLVHTCYTILYFTAEAAFNHGLNPHVMVTYRHFIGGLVMFPFAYVLERKVRP 79

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
           KLTLALF EIFVLSL G+ LTLNMYFASL YTSPTF+AS+VNT+A++TFV+A++LRLE L
Sbjct: 80  KLTLALFAEIFVLSLFGIGLTLNMYFASLTYTSPTFLASMVNTIASLTFVMAIILRLEHL 139

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTI 191
           D+RN RG+AK+LGTL SL GV IMT  KGP  RN   P IHI RNN + E W KGS LT+
Sbjct: 140 DIRNPRGLAKILGTLFSLVGVMIMTSCKGPVIRNLSSPLIHIGRNN-MHENWTKGSILTV 198

Query: 192 ASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDL 251
           AS ITWS  YIMQA T+KRYPA LS+TTWM F+G AQSAV  VI+  KP  W   +NI L
Sbjct: 199 ASCITWSIWYIMQAFTMKRYPAPLSITTWMNFIGGAQSAVIAVIMQHKPEAWSFSVNIQL 258

Query: 252 WSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVG 311
           WSTIY GVV SG+++F+ LWCT ++GPVF TMFNP+STI+VA  AYFV GEKL+ GSIVG
Sbjct: 259 WSTIYAGVVCSGIMIFLLLWCTKQKGPVFVTMFNPLSTIMVAFTAYFVLGEKLYTGSIVG 318

Query: 312 AVVVIGGLYLLLWGKEGDHQEAQIKTKEQSD-PKISQGEP 350
           AV+ I GLYLLLWGKE D Q+  +K++EQS+     Q EP
Sbjct: 319 AVIAIIGLYLLLWGKEID-QQVGVKSQEQSNLTSEEQKEP 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533791|ref|XP_003535442.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like [Glycine max]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/334 (65%), Positives = 263/334 (78%), Gaps = 3/334 (0%)

Query: 13  FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK 72
           FKP LLMVL Q  Y+FLY IT ASF+HGMNP VYVTYRHI+A + MFPFAYFLER  RPK
Sbjct: 15  FKPHLLMVLVQFGYSFLYLITNASFDHGMNPFVYVTYRHILAAVLMFPFAYFLERNARPK 74

Query: 73  LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLD 132
           LT +LF+EIFVLSL+GV+LT+NM+FASL+YT+PTF+ +++NT+  +TFVIAV  R E LD
Sbjct: 75  LTFSLFMEIFVLSLLGVSLTINMHFASLKYTNPTFIVAMLNTIPTLTFVIAVAFRFELLD 134

Query: 133 LRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ-RNNIIQEQWLKGSFLTI 191
           L N+RG+AKVLGTL+SLAG  I+ +YKG   RN   P IHI  ++  I E WLKGS LT+
Sbjct: 135 LXNSRGIAKVLGTLISLAGALIIALYKGNLMRNLWRPLIHIPGKSAAINESWLKGSLLTV 194

Query: 192 ASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDL 251
            S +TWS  YIMQA TLKRYPAQLSL TWM F+GAAQSAVFTVIV    + W IGLNIDL
Sbjct: 195 LSCVTWSIWYIMQAATLKRYPAQLSLVTWMSFVGAAQSAVFTVIVEHNRSAWTIGLNIDL 254

Query: 252 WSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVG 311
           WSTIYGG+VV+ LI ++ LWCT+K+GPVF TMFNP+STILVA +AYF+ GEKL+LGSI+G
Sbjct: 255 WSTIYGGIVVACLITYVLLWCTEKKGPVFVTMFNPLSTILVAFVAYFILGEKLYLGSIIG 314

Query: 312 AVVVIGGLYLLLWGKEGDHQEAQIKTKEQSDPKI 345
           A  +I G+YLLLWGK    QE    + E S  +I
Sbjct: 315 AFTIIIGMYLLLWGK--SEQEVSQCSTEDSGCRI 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192100|gb|EEC74527.1| hypothetical protein OsI_10035 [Oryza sativa Indica Group]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/342 (60%), Positives = 264/342 (77%), Gaps = 4/342 (1%)

Query: 4   SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAY 63
           +S+ +++ R+ P  LM+L+QL YT +YFITEA+FN G+NP +YVTYRH+V  + + PFAY
Sbjct: 7   ASMGDLWRRYAPHNLMILSQLCYTLMYFITEAAFNKGLNPFIYVTYRHLVVAVFLAPFAY 66

Query: 64  FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIA 123
           + E+K+RP++TL LFLEIFVLSL+GV+LTLNMYFASL YTSPTFV SVVNTVA++TFVIA
Sbjct: 67  YQEKKLRPRMTLMLFLEIFVLSLLGVSLTLNMYFASLMYTSPTFVTSVVNTVASITFVIA 126

Query: 124 VVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ---RNNIIQ 180
           +V+R+E +D+R+ RG+AK+ GT+VS AGVT MT+YKG A  +P   PI I        + 
Sbjct: 127 IVVRMEIVDVRSIRGLAKIAGTVVSFAGVTTMTLYKGTAISSPWKAPISIHGGGGGGGVH 186

Query: 181 EQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKP 240
           E WLKGSFL +AS I WS  YI+QA +LKRYPAQLSLT WMC +G  QSAVFT  +  KP
Sbjct: 187 ESWLKGSFLAVASCICWSIWYILQASSLKRYPAQLSLTAWMCTVGGIQSAVFTAFMQHKP 246

Query: 241 ADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVF 300
            DWRIG  +  W  +Y G   +G  VF QLWCT+K+GPVF TMFNP+STI+VAILAYF+F
Sbjct: 247 EDWRIGFGLKFWCIVYSGFACNGFTVFAQLWCTEKKGPVFVTMFNPLSTIMVAILAYFMF 306

Query: 301 GEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSD 342
           GE L++GSI+G VVVI GLY+LLWGK+ D QE     +++SD
Sbjct: 307 GENLYVGSIIGGVVVILGLYMLLWGKDKD-QEYNANKQQESD 347

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108706201|gb|ABF93996.1| Integral membrane protein DUF6 containing protein, expressed [Oryza sativa Japonica Group] gi|215769112|dbj|BAH01341.1| unnamed protein product [Oryza sativa Japonica Group] gi|222624195|gb|EEE58327.1| hypothetical protein OsJ_09421 [Oryza sativa Japonica Group]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/342 (60%), Positives = 264/342 (77%), Gaps = 4/342 (1%)

Query: 4   SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAY 63
           +S+ +++ R+ P  LM+L+QL YT +YFITEA+FN G+NP +YVTYRH+V  + + PFAY
Sbjct: 7   ASMGDLWRRYAPHNLMILSQLCYTLMYFITEAAFNKGLNPFIYVTYRHLVVAVFLAPFAY 66

Query: 64  FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIA 123
           + E+K+RP++TL LFLEIFVLSL+GV+LTLNMYFASL YTSPTFV SVVNTVA++TFVIA
Sbjct: 67  YQEKKLRPRMTLMLFLEIFVLSLLGVSLTLNMYFASLMYTSPTFVTSVVNTVASITFVIA 126

Query: 124 VVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ---RNNIIQ 180
           +V+R+E +D+R+ RG+AKV GT+VS AGVT MT+YKG A  +P   PI I        + 
Sbjct: 127 IVVRMEIVDVRSIRGLAKVAGTVVSFAGVTTMTLYKGTAISSPWKAPISIHGGGGGGGVH 186

Query: 181 EQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKP 240
           E WLKGSFL +AS I WS  YI+QA +LKRYPAQLSLT WMC +G  QSAVFT  +  KP
Sbjct: 187 ESWLKGSFLAVASCICWSIWYILQASSLKRYPAQLSLTAWMCTVGGIQSAVFTAFMQHKP 246

Query: 241 ADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVF 300
            DWRIG  +  W  +Y G   +G  VF QLWCT+K+GPVF TMFNP+STI+VAILAYF+F
Sbjct: 247 EDWRIGFGLKFWCIVYSGFACNGFTVFAQLWCTEKKGPVFVTMFNPLSTIMVAILAYFMF 306

Query: 301 GEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSD 342
           GE L++GSI+G VVVI GLY+LLWGK+ D QE     +++SD
Sbjct: 307 GENLYVGSIIGGVVVILGLYMLLWGKDKD-QEYNANKQQESD 347

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449012|ref|XP_004142259.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/344 (60%), Positives = 264/344 (76%), Gaps = 2/344 (0%)

Query: 1   MKPSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFP 60
           M    L   ++RFKP +L++  Q  YTFLYF  +ASF HGMNPHV++TYR  +A I + P
Sbjct: 2   MNVCFLQVFFIRFKPHILIIFTQFGYTFLYFFVDASFKHGMNPHVHITYRQTLATITLLP 61

Query: 61  FAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTF 120
           FAYFLERK+RP++TLALFLEIFVLSL+GVTL+ N YFASLRYTSPTF+ S++NT+A +TF
Sbjct: 62  FAYFLERKLRPRITLALFLEIFVLSLLGVTLSTNTYFASLRYTSPTFITSMLNTIAGLTF 121

Query: 121 VIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNI-- 178
           +IAVV+RLE ++  N +G+AKV+GTLVSL GV IMT YKGP  RN   P IHIQ      
Sbjct: 122 IIAVVVRLEVVEFDNPKGIAKVMGTLVSLGGVLIMTFYKGPIIRNVCQPLIHIQHKATYH 181

Query: 179 IQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR 238
           + E WLKGS LT++S ++W+  YI+QA TLKRYPA LSLTTWM   GA Q+AV+TV    
Sbjct: 182 LHEDWLKGSLLTVSSCLSWAISYILQAFTLKRYPAPLSLTTWMNLFGAVQTAVYTVSTQH 241

Query: 239 KPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYF 298
           K   W IG NIDLW+ IY G++ S +I++IQLWCT++RGPVF TM+NP+ +ILVA+L+YF
Sbjct: 242 KAGVWNIGFNIDLWAIIYAGLMCSSIIIYIQLWCTEERGPVFVTMYNPLGSILVALLSYF 301

Query: 299 VFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQSD 342
           V G+KL+LGSIVG  +VI GLYLLLWGK+ D Q+ Q K+  +SD
Sbjct: 302 VVGQKLYLGSIVGGGIVIIGLYLLLWGKQDDEQKLQNKSPLESD 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326522246|dbj|BAK07585.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 253/328 (77%), Gaps = 1/328 (0%)

Query: 5   SLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYF 64
            L  ++ R+ P  +M++ QL YT +YF+TEA+FN G+NP+VYVTYRH++  + ++PFAY+
Sbjct: 7   GLGGLWRRYAPHNMMIMVQLCYTLMYFVTEAAFNRGLNPYVYVTYRHLLVAVLLWPFAYY 66

Query: 65  LERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAV 124
            E+K+RPK+T  LFLEIFVLSL+GV+LTLNMYFASL+YTSPTFV S+VNTVA++TFVIA+
Sbjct: 67  HEKKLRPKMTWMLFLEIFVLSLLGVSLTLNMYFASLKYTSPTFVTSMVNTVASITFVIAI 126

Query: 125 VLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHI-QRNNIIQEQW 183
            LR+E +DLR+ARG+AKV GT VS AGVT MT+YKG A  +P   P+HI    +   + W
Sbjct: 127 ALRIEIVDLRSARGLAKVAGTAVSFAGVTTMTLYKGAAIASPWKAPVHIPGGGDAAHDGW 186

Query: 184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADW 243
           LKGS L +AS + WS  YIMQA ++KRYPA+LSLT WM  +G  QS  FTV++  +  DW
Sbjct: 187 LKGSLLAVASCVCWSVWYIMQATSVKRYPAELSLTAWMATVGGVQSVAFTVLLQHEKQDW 246

Query: 244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEK 303
            IG  +  W  +Y G+  SG  VF QLWCT+K+GPVF TMFNPVSTI+VAILAYF+FGE 
Sbjct: 247 LIGFGLKFWCIVYSGIACSGFTVFAQLWCTEKKGPVFVTMFNPVSTIMVAILAYFIFGEN 306

Query: 304 LFLGSIVGAVVVIGGLYLLLWGKEGDHQ 331
           L++GSI+G VVVI GLY+LLWGK+ D +
Sbjct: 307 LYVGSIIGGVVVILGLYMLLWGKDKDQE 334

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.837	0.783	0.390	8.6e-56
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.862	0.751	0.364	4.8e-55
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.837	0.785	0.361	1.3e-54
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.837	0.791	0.378	2.1e-54
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.837	0.763	0.348	5.8e-50
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.831	0.748	0.330	8.5e-49
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.805	0.785	0.368	3.7e-48
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.831	0.759	0.325	1.6e-47
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.86	0.773	0.318	5.4e-47
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.825	0.733	0.317	1.8e-46

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 116/297 (39%), Positives = 173/297 (58%)

Query:    13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK 72
             +KP + +V  Q  Y  L  I + + N GM+PHV  +YRHIVA I + PFAYFL+RKIRPK
Sbjct:     6 WKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPK 65

Query:    73 LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETLD 132
             +TL++F +I +L L+  T+  N+Y+  ++YTS                      RLE ++
Sbjct:    66 MTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVN 125

Query:   133 LRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPP--IHIQRNNI-IQEQWLKGSFL 189
             ++     AK+LGT+V++ G  +MTV KGP    P   P  IH   +N  +++   KG+ L
Sbjct:   126 VKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASL 185

Query:   190 TIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLN 248
                  I W+    +QAITLK YP +LSLT ++CFLG+ +S +  + + R  P+ W I L+
Sbjct:   186 IAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLD 245

Query:   249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLF 305
               L + +YGGV+ SG+  ++Q      RGPVF T FNP+S ++VAIL   +  E +F
Sbjct:   246 SKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMF 302

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 114/313 (36%), Positives = 179/313 (57%)

Query:     4 SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAY 63
             SS  +     KP   M+  Q  Y  +  IT+ S N GM+ +V V YRH +A   + PFA+
Sbjct:     7 SSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAF 66

Query:    64 FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXX 123
             F ERK +PK+T ++F+++F+L L+G  +  N Y+  L+YTSP                  
Sbjct:    67 FFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILA 126

Query:   124 XXLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ--------- 174
                R+E LDL+     AK+ GT+V++AG  +MT+YKGP         +HIQ         
Sbjct:   127 VLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTS 186

Query:   175 -RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPA-QLSLTTWMCFLGAAQSAVF 232
              +N+   +++LKGS L I +++ W++++++QA  LK Y   QLSLTT +CF+G  Q+   
Sbjct:   187 SKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAV 246

Query:   233 TVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILV 292
             T ++   P+ WRIG +++L +  Y G+V S +  ++Q     KRGPVFAT F+P+  ++V
Sbjct:   247 TFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIV 306

Query:   293 AILAYFVFGEKLF 305
             A++  FV  EK+F
Sbjct:   307 AVMGSFVLAEKIF 319

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 108/299 (36%), Positives = 166/299 (55%)

Query:    12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
             + KP++ ++  Q  Y  +Y IT  SF HGMN  +  TYRH+VA I + PFA  LERKIRP
Sbjct:     8 KLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRP 67

Query:    72 KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETL 131
             K+T  LFL I  L  +   L  N+Y+  ++ TS                      R+ET+
Sbjct:    68 KMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETV 127

Query:   132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--NPGHPPIHIQRNNIIQE----QWLK 185
             +L+  R +AKV+GT +++ G  +MT+YKGPA       H  +H   +    E     W+ 
Sbjct:   128 NLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVT 187

Query:   186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRI 245
             G+   + S  TW+  +I+Q+ TLK+YPA+LSL  W+C +G   + + ++I+ R  + W++
Sbjct:   188 GTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAWKV 247

Query:   246 GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKL 304
             G++    + +Y GVV SG+  +IQ     +RGPVF T F+P+  I+ A L   V  EK+
Sbjct:   248 GMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKI 306

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 112/296 (37%), Positives = 168/296 (56%)

Query:    12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
             + KP+L ++  Q  Y  +Y IT  SF HGM+  V  TYRH+VA + M PFA   ERKIRP
Sbjct:     8 KIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRP 67

Query:    72 KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETL 131
             K+TLA+F  +  L ++   +  N+Y+  L+ TS                      RLET+
Sbjct:    68 KMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETV 127

Query:   132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--NPGHPPIHIQRNNIIQEQ-WLKGSF 188
             + R    +AKV+GT++++ G  IMT+YKGPA       H   H   ++    Q W+ G+ 
Sbjct:   128 NFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQHWVLGTI 187

Query:   189 LTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLN 248
               + S  TW+A +I+Q+ TLK YPA+LSL T +C +G   +A+ ++I+ R P+ W+IG++
Sbjct:   188 AIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKIGMD 247

Query:   249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKL 304
                 + +Y GVV SG+  +IQ     +RGPVF T F+P+  I+ A L   V  EK+
Sbjct:   248 SGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKI 303

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 104/298 (34%), Positives = 161/298 (54%)

Query:    12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
             + +P LLM+  Q      Y +  A+ N G N +V + YR++VA + + PFA   ERK+RP
Sbjct:    10 KLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRP 69

Query:    72 KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETL 131
             K+TL++  +I  L  +   L     +  +  TS                     LR+E +
Sbjct:    70 KMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKV 129

Query:   132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRN---NIIQEQ--WLKG 186
             ++   R  AK++GTLV L G  +MT+YKGP    P   P   Q+N   N  Q+   W+ G
Sbjct:   130 NIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVG 189

Query:   187 SFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIG 246
             + L +   + WS  Y++Q+IT+K YPA LSL+  +C  GA QS    ++V R P+ W +G
Sbjct:   190 TLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVG 249

Query:   247 LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKL 304
              +  L++ +Y G+V SG+  ++Q      RGPVF T FNP+  ILVA++A F+  E++
Sbjct:   250 WDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQI 307

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 100/303 (33%), Positives = 161/303 (53%)

Query:    14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL 73
             KP L M+  Q  Y  +Y IT  S  HGMN +V   YRH +A   + PFA F ERKIRPK+
Sbjct:    10 KPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKM 69

Query:    74 TLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETLDL 133
             T  +FL+I +L  +   L  N+Y+  + YTS                      RLE+++ 
Sbjct:    70 TFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNF 129

Query:   134 RNARGMAKVLGTLVSLAGVTIMTVYKGP-----------AARNPGHPPIHIQRNNIIQEQ 182
             +  R +AKV+GT+++++G  +MT+YKGP              + G    H        ++
Sbjct:   130 KKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDK 189

Query:   183 -WLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPA 241
              W+ G+ + +  +  W+  +I+Q+ TLK+YPA+LSLTT +C +G  +    +++  R  +
Sbjct:   190 HWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDLS 249

Query:   242 DWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFG 301
              W+IG + +L++  Y GV+ SG+  ++Q     +RGPVF   FNP+  ++ A L   V  
Sbjct:   250 AWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVLS 309

Query:   302 EKL 304
             E +
Sbjct:   310 ESI 312

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 108/293 (36%), Positives = 163/293 (55%)

Query:    14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL 73
             KP L++ + Q+ YT ++ I++A FN GMN  V+V YR   A I + P A+F ERK  P L
Sbjct:     7 KPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKSAPPL 66

Query:    74 TLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETLDL 133
             +   F++IF+LSL GVTL+L++   +L YTS                       +E L +
Sbjct:    67 SFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGMERLKV 126

Query:   134 RNARGMAKVLGTLVSLAGVTIMTVYKGPAARNP-----GHPPIHIQRNN---II--QEQW 183
             ++ +G AK++G  V + GV I+ +YKGP  + P      H   H  RNN   +      W
Sbjct:   127 KSIQGTAKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHPHRNNPGHVSGGSTSW 186

Query:   184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADW 243
             LKG  L I S+I W    ++Q   LK YP++L  TT  C L + QS V  + + R  + W
Sbjct:   187 LKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDISAW 246

Query:   244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILA 296
             ++G N+ L + IY G +V+G+  ++Q W  +KRGPVF +MF P+S +L  +L+
Sbjct:   247 KLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLS-LLFTLLS 298

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 97/298 (32%), Positives = 167/298 (56%)

Query:    12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
             + K ++ ++  Q  +   + ++  + N G++  VY  YR+++A + + PFAYF E+K RP
Sbjct:    32 KVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERP 91

Query:    72 KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETL 131
              LT++L  + F L+L+G+T     Y   L Y +P                    LRLE +
Sbjct:    92 PLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHI 151

Query:   132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNII----QEQWLKGS 187
             DL    G+AKVLGTLVS+ G T++T+Y+G    + G   +++Q+  ++          G 
Sbjct:   152 DLVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQG---LNMQKEEVVGSDNSHSLTLGW 208

Query:   188 FLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL 247
                +   ++W+   ++QA  LK+YPA+L+LT++ CF G  Q  V  + V     +W I  
Sbjct:   209 LYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVS 268

Query:   248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLF 305
               +L++ +Y G++ SGL+V++Q WC  K GPVF  +F P+ T+LVA +A+ + G++L+
Sbjct:   269 WEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLY 326

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 99/311 (31%), Positives = 161/311 (51%)

Query:     5 SLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYF 64
             SL  V  + +  + M+  Q  Y   + ++ A+ N G++  V+  YR+I+A + + PFAYF
Sbjct:    10 SLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYF 69

Query:    65 LERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXX 124
             LE+K RP +TL   ++ F L+L+G+T     Y   L  TSP                   
Sbjct:    70 LEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAA 129

Query:   125 XLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG-HPPIHIQRNN--IIQ- 180
              LR+E + +    G++K+LGT + +AG +++T+YKGP    P  H   H+   N  ++  
Sbjct:   130 LLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAP 189

Query:   181 ------EQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTV 234
                   + W  G    I   ++WS   + QA  LK YPA+LS+T++ CF G  Q  +   
Sbjct:   190 LGNAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAA 249

Query:   235 IVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAI 294
                R    W      +L++ +Y G+V SG+   +Q+WC D+ GPVF  ++ PV T++VAI
Sbjct:   250 FCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAI 309

Query:   295 LAYFVFGEKLF 305
             +A    GE+ +
Sbjct:   310 MASIALGEEFY 320

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 93/293 (31%), Positives = 165/293 (56%)

Query:    14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL 73
             KP   MV  Q  Y  +  +T+   + GM+ +V V YR+  A  A+ PFA   ERK+R K+
Sbjct:    10 KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKM 69

Query:    74 TLALFLEIFVLSLVGVTLTLNMYFASLRYTSPXXXXXXXXXXXXXXXXXXXXLRLETLDL 133
             T  +F+ IF+L+L+G  +  N+Y+  L+ TSP                     R+E +++
Sbjct:    70 TFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEM 129

Query:   134 RNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQR-NNIIQEQWLKGSFLTIA 192
             R  R + KV+GTLV++ G  +M  YKGP          H+   ++     +LK +   + 
Sbjct:   130 RKVRCLVKVMGTLVTVVGSILMIFYKGPFIN---FFRSHLTAASSPPTADYLKAAVFLLL 186

Query:   193 SSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLW 252
             +S++W++ +++QA TLK+Y A LS++T +CF+G  QS     ++   P+   IG +++L 
Sbjct:   187 ASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNLL 246

Query:   253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLF 305
             ++ Y G++ S +  ++Q     ++GPVF T FNP+  ++V+I+++FV G+ ++
Sbjct:   247 ASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIY 299

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80638	WTR14_ARATH	No assigned EC number	0.4089	0.9457	0.8850	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	3e-33
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-09
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-08
pfam00892	126	pfam00892, EamA, EamA-like transporter family	5e-06
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	7e-06

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  126 bits (317), Expect = 3e-33
 Identities = 77/332 (23%), Positives = 163/332 (49%), Gaps = 9/332 (2%)

Query: 16  LLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLER-KIRPKLT 74
           L  M+  + S   +  + + + + G+N + ++ Y +++A + + P  +F  R +  P L+
Sbjct: 15  LTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLS 74

Query: 75  LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLR 134
           +++  +I +L  +G    +  Y   + Y++PT  +++ N   A+TF++A++ R+E +  +
Sbjct: 75  VSILSKIGLLGFLGSMYVITGYIG-IEYSNPTLASAISNITPALTFILAIIFRMEKVSFK 133

Query: 135 NARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRN-----NIIQEQWLKGSFL 189
               +AKV+GT++SL G  ++  Y GP       PP    R      +     WL G  L
Sbjct: 134 ERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGAL 193

Query: 190 TIASSITWSAMYIMQAITLKRYPAQLSLT-TWMCFLGAAQSAVFTVIVARKPADWRIGLN 248
                I  S  +I+QA  +  YPA  +++  +   +    S +  V+    P+ W I  +
Sbjct: 194 LTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFD 253

Query: 249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGS 308
           I L + +   ++ S   V I  W    +GP++  +F P+S ++  ++      + L+LG 
Sbjct: 254 ITLITIVTMAIITSVYYV-IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC 312

Query: 309 IVGAVVVIGGLYLLLWGKEGDHQEAQIKTKEQ 340
           ++G +++  G Y ++WGK  + ++  +    +
Sbjct: 313 LIGGILITLGFYAVMWGKANEEKDQLLSFSGK 344

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 62/315 (19%), Positives = 119/315 (37%), Gaps = 30/315 (9%)

Query: 12  RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP 71
               LL ++L  L +   +   + +             R ++A + + P      R +RP
Sbjct: 5   LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP 64

Query: 72  KLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETL 131
            L   L L   +L+L+G+ L   + F +L+YTS +  + ++  +   T ++AV+L L   
Sbjct: 65  ALRPWLLL--LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL--- 119

Query: 132 DLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTI 191
                  + ++LG L++LAGV ++ +  G                       L G  L +
Sbjct: 120 --GERLSLLQILGILLALAGVLLILLGGGGGGILS-----------------LLGLLLAL 160

Query: 192 ASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDL 251
           A+++ W+    +    L R             L      +F +     P   R       
Sbjct: 161 AAALLWALYTALVKR-LSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSR-----AW 214

Query: 252 WSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVG 311
              +Y GV  +GL   +  +     G     + + +  +  A+L   + GE L    ++G
Sbjct: 215 LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLG 274

Query: 312 AVVVIGGLYLLLWGK 326
           A +V+ G+ L     
Sbjct: 275 AALVVLGVLLASLRA 289

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 23/130 (17%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 195 ITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWST 254
           ++W+  ++     L+R    L+ T +   +      +   ++ +  A   +     + + 
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKPFALLSLK---AILAL 56

Query: 255 IYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVV 314
           +Y G+  + L   +  +         A++   +S +   IL+  + GEKL L  ++G V+
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 315 VIGGLYLLLW 324
           ++ G+ L+L 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 7/129 (5%)

Query: 29  LYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG 88
           LYF+        ++P  +  YR ++AGI +     FL RK    L+L   L +  L L G
Sbjct: 5   LYFVFSKKLLERISPLTFTAYRFLIAGI-LLILLLFLLRKPFALLSLKAILALLYLGLFG 63

Query: 89  VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVS 148
             L   +YF +L+Y S +  + + +     T +++V+L  E L L+      ++LG ++ 
Sbjct: 64  TALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLLGIVLI 117

Query: 149 LAGVTIMTV 157
           L GV ++ +
Sbjct: 118 LLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 37/274 (13%)

Query: 47  VTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPT 106
           V  R I A + + P       + RP L   L L   +L  + + +   +YF +++     
Sbjct: 22  VFRRLIFALLLLLPL-----LRRRPPLKRLLRL--LLLGALQIGVFYVLYFVAVKRLPVG 74

Query: 107 FVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNP 166
             A ++        +++ ++  E            +L  ++ LAG  ++ +  G  + NP
Sbjct: 75  EAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAG-AVLLLSDGNLSINP 127

Query: 167 GHPPIHIQRNNIIQEQWLKGSFLTIASSITWSA-MYIMQAITLKRYPAQLSLTTWMCFLG 225
                              G  L + S I+++    + + +  K  P  L  T W+  LG
Sbjct: 128 ------------------AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLG 169

Query: 226 AAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFN 285
           A     F   +   P      L++   + +Y G++ + L  F+         P  A++  
Sbjct: 170 ALLLLPFAWFLGPNP----QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA 225

Query: 286 PVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL 319
               ++  +L   + GE L L  ++G  ++I  +
Sbjct: 226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
COG2962	293	RarD Predicted permeases [General function predict	99.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.91
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.88
KOG2765	416	consensus Predicted membrane protein [Function unk	99.85
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.81
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.76
KOG1580	337	consensus UDP-galactose transporter related protei	99.73
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.7
KOG1581	327	consensus UDP-galactose transporter related protei	99.69
COG2510	140	Predicted membrane protein [Function unknown]	99.68
KOG2766	336	consensus Predicted membrane protein [Function unk	99.67
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.64
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.64
COG2510	140	Predicted membrane protein [Function unknown]	99.63
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.59
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.48
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.42
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.37
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.35
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.34
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.34
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.31
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.26
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.24
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.23
KOG1582	367	consensus UDP-galactose transporter related protei	99.22
PRK11272	292	putative DMT superfamily transporter inner membran	99.22
PRK13499	345	rhamnose-proton symporter; Provisional	99.18
PLN00411	358	nodulin MtN21 family protein; Provisional	99.18
PRK15430	296	putative chloramphenical resistance permease RarD;	99.18
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.1
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.09
PRK11689	295	aromatic amino acid exporter; Provisional	99.08
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.05
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.01
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.92
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.92
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.89
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.85
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.76
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.72
COG2962	293	RarD Predicted permeases [General function predict	98.71
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.71
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.7
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.64
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.55
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.52
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.52
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.49
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.29
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.21
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.2
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.12
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.1
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.01
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.84
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.79
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.76
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.74
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.73
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.71
COG2076	106	EmrE Membrane transporters of cations and cationic	97.66
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.62
COG2076	106	EmrE Membrane transporters of cations and cationic	97.57
PRK11431	105	multidrug efflux system protein; Provisional	97.57
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.54
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.53
PRK11431	105	multidrug efflux system protein; Provisional	97.5
KOG2765	416	consensus Predicted membrane protein [Function unk	97.49
PRK13499	345	rhamnose-proton symporter; Provisional	97.42
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.32
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.18
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.08
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.01
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.87
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.69
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.66
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.64
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.33
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.29
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	96.29
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.15
KOG1581	327	consensus UDP-galactose transporter related protei	95.67
KOG1580	337	consensus UDP-galactose transporter related protei	95.27
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.17
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.58
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.45
KOG4831	125	consensus Unnamed protein [Function unknown]	93.37
KOG2766	336	consensus Predicted membrane protein [Function unk	91.16
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.88
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.61
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	89.96
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	86.82
PRK02237	109	hypothetical protein; Provisional	86.24
KOG1582	367	consensus UDP-galactose transporter related protei	86.24
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.31

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.5e-38  Score=289.45  Aligned_cols=322  Identities=21%  Similarity=0.476  Sum_probs=254.4

Q ss_pred             CccchhhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcccc-CCccCHHHHHHHH
Q 018804            4 SSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKI-RPKLTLALFLEIF   82 (350)
Q Consensus         4 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~   82 (350)
                      ++|+-+.|+.+.+..++...+.++...++.|.+.+.|++|+.+.++|+.++.++++++.+.++|++ .++.+++++..+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~   82 (358)
T PLN00411          3 GTVSLWRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIG   82 (358)
T ss_pred             cchhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence            345556778999999999999999999999999999999999999999999999999987654422 3445678889999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHh------ccccccccccccchhhHHHHHHHHHHHHh
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLR------LETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~------~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      +.|+++ .+.+.+++.+++|+++++++++.++.|+++.+++++++      |||+++.      +++|+++++.|+.++.
T Consensus        83 l~g~~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         83 LLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHH
Confidence            999997 66778999999999999999999999999999999994      6666666      9999999999999987


Q ss_pred             hccCCCCCCC---CCCCccCcc--cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHH
Q 018804          157 VYKGPAARNP---GHPPIHIQR--NNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAV  231 (350)
Q Consensus       157 ~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (350)
                      .++++.....   .+-+.++..  ......+...|++++++++++|++|++.+|+..+++++....++++..++.+...+
T Consensus       156 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~  235 (358)
T PLN00411        156 FYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSM  235 (358)
T ss_pred             HccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHH
Confidence            6444211000   000000000  00112344679999999999999999999999988855556677777777776666


Q ss_pred             HHHHHhc-CCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhh
Q 018804          232 FTVIVAR-KPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIV  310 (350)
Q Consensus       232 ~~~~~~~-~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~i  310 (350)
                      .....+. +...|..........+++.+++ +.++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++
T Consensus       236 ~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i  314 (358)
T PLN00411        236 IGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI  314 (358)
T ss_pred             HHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence            6665443 2223322122234457777765 6789999999999999999999999999999999999999999999999


Q ss_pred             hhHHHhhhheeeeecccCCcchh
Q 018804          311 GAVVVIGGLYLLLWGKEGDHQEA  333 (350)
Q Consensus       311 G~~li~~g~~l~~~~~~~~~~~~  333 (350)
                      |++++++|+++..+.++|+.|++
T Consensus       315 G~~LIl~Gv~l~~~~~~~~~~~~  337 (358)
T PLN00411        315 GGILITLGFYAVMWGKANEEKDQ  337 (358)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhc
Confidence            99999999999988776655433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=6.1e-33  Score=248.88  Aligned_cols=280  Identities=15%  Similarity=0.158  Sum_probs=232.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL   93 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   93 (350)
                      .-.+..+...++||.+.+..|...++ ++|.+++++|+.++.++++++...+++ +  ..+++++......|.++...++
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHH
Confidence            34567788899999999999998886 999999999999999998888654322 2  2356778888888988777788


Q ss_pred             HHHHHhh-hccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 018804           94 NMYFASL-RYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIH  172 (350)
Q Consensus        94 ~~~~~al-~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  172 (350)
                      .+++.+. +++++++++++.++.|+++.+++++ +|||++++      ++++++++++|+.++... ++           
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~~-----------  144 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-GN-----------  144 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-cc-----------
Confidence            8999999 9999999999999999999999985 69999999      999999999999988531 10           


Q ss_pred             CcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHH
Q 018804          173 IQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLW  252 (350)
Q Consensus       173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  252 (350)
                            . +....|++++++++++|+.|.+..|+..++  ++...+.++...+.+...+.....+.+..  ...+...|.
T Consensus       145 ------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  213 (292)
T PRK11272        145 ------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFL  213 (292)
T ss_pred             ------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHH
Confidence                  0 122479999999999999999999887654  44556677877887777776654322211  112345788


Q ss_pred             HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      .+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus       214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999999999999999999999999998876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=1.7e-32  Score=246.78  Aligned_cols=279  Identities=16%  Similarity=0.211  Sum_probs=216.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHH
Q 018804           16 LLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNM   95 (350)
Q Consensus        16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   95 (350)
                      .++.++++++||.++++.|...++ ++|.++.++|+.++.+.+.++.  + ++   +.++   ......|++.....+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~---~~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPL---NLLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--c-CC---CCch---HHHHHHHHHHHHHHHHH
Confidence            466888999999999999999887 9999999999999877766553  2 21   1122   23444566544556667


Q ss_pred             HHHhhhc-cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804           96 YFASLRY-TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ  174 (350)
Q Consensus        96 ~~~al~~-~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  174 (350)
                      ++.++++ .+++.++++.+++|+++.+++++++|||++++      ++++++++++|+.++...+.              
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~~~--------------  135 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIEDSL--------------  135 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccccC--------------
Confidence            8889998 57899999999999999999999999999999      99999999999998863211              


Q ss_pred             ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCc--hhHHHHHHHHHHHHHHHHHHHHHhcCC---ccccccchh
Q 018804          175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPA--QLSLTTWMCFLGAAQSAVFTVIVARKP---ADWRIGLNI  249 (350)
Q Consensus       175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~  249 (350)
                         +.......|+++++.++++|+.|.+..|+..++.++  ......+....+.+.........+...   ..+...+..
T Consensus       136 ---~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (299)
T PRK11453        136 ---NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMT  212 (299)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHH
Confidence               111122479999999999999999999998766522  233344444444433333333222211   112223445


Q ss_pred             hHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          250 DLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       250 ~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      .|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||.+++.+++|++++++|+++..+.++
T Consensus       213 ~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        213 TILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            799999999999999999999999999999999999999999999999999999999999999999999998776554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=2.5e-32  Score=244.91  Aligned_cols=284  Identities=11%  Similarity=0.077  Sum_probs=225.7

Q ss_pred             CCccchhhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHH
Q 018804            3 PSSLHNVYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIF   82 (350)
Q Consensus         3 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   82 (350)
                      |++.++ ..+.+++.+++++++.|+..+.+.|++.++ .+|..+.++|++++.++++++...  ++  .+.+++++...+
T Consensus         2 ~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~   75 (293)
T PRK10532          2 PGSLRK-LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLL   75 (293)
T ss_pred             CCcccc-cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHH
Confidence            334433 345889999999999999999999999998 999999999999999998876422  11  134567788888


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCC
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPA  162 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~  162 (350)
                      ..|.+ .+..+.+++++++++|++.++++..+.|+++.+++.    ||.  .      +..++.++++|+.++... +. 
T Consensus        76 ~~g~~-~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~------~~~~~~i~~~Gv~li~~~-~~-  140 (293)
T PRK10532         76 FYGVS-LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--V------DFVWVVLAVLGLWFLLPL-GQ-  140 (293)
T ss_pred             HHHHH-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--H------HHHHHHHHHHHHheeeec-CC-
Confidence            88887 677889999999999999999999999999988763    443  3      445677889999887532 11 


Q ss_pred             CCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018804          163 ARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPAD  242 (350)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (350)
                                     +.......|++++++++++|+.|.+..|+..++. ++... .+....+++...+.....+.. ..
T Consensus       141 ---------------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~  202 (293)
T PRK10532        141 ---------------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE-AL  202 (293)
T ss_pred             ---------------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc-cc
Confidence                           0111225799999999999999999999998776 66555 455566666666655543211 11


Q ss_pred             ccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804          243 WRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL  322 (350)
Q Consensus       243 ~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~  322 (350)
                         .+...|...+++|++++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|++..
T Consensus       203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence               12234666789999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             eecccC
Q 018804          323 LWGKEG  328 (350)
Q Consensus       323 ~~~~~~  328 (350)
                      .+..+|
T Consensus       280 ~~~~~~  285 (293)
T PRK10532        280 TLTIRR  285 (293)
T ss_pred             HhcCCC
Confidence            766544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=6e-32  Score=242.68  Aligned_cols=285  Identities=13%  Similarity=0.035  Sum_probs=215.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      +.++++++++++++||.+++..|...++ ++|..+.++|+.++.++++++..   +++.   ++ +.++....+.++...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~~-~~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---RQ-FPKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---cc-ccHHHHHHHhHHHHH
Confidence            4567889999999999999999999987 99999999999999999887631   2111   11 122334445555677


Q ss_pred             HHHHHHHhhhc----cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804           92 TLNMYFASLRY----TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG  167 (350)
Q Consensus        92 ~~~~~~~al~~----~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  167 (350)
                      +..+++.++++    .++++++++.++.|+++.+++++++|||++++      +++|++++++|++++...+.+....  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~~~~~~~--  145 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGDNGLSLA--  145 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCCccchhh--
Confidence            77778877765    56788899999999999999999999999999      9999999999999987421100000  


Q ss_pred             CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804          168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL  247 (350)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (350)
                         . .+   ........|+++++.++++|+.|+++.|+..++. ++.....   ..+.+...+.....+ .. . ...+
T Consensus       146 ---~-~~---~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-~-~~~~  211 (295)
T PRK11689        146 ---E-LI---NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-A-MVFS  211 (295)
T ss_pred             ---h-hh---hccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-c-ccCC
Confidence               0 00   0001224699999999999999999999998776 6554322   223333333333222 11 1 1123


Q ss_pred             hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      ...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++....++
T Consensus       212 ~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        212 LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            346777777774 7899999999999999999999999999999999999999999999999999999999888765443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=1.9e-31  Score=239.49  Aligned_cols=279  Identities=12%  Similarity=0.057  Sum_probs=208.8

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccC--C-ccCHHHHHHHHHHHH
Q 018804           10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR--P-KLTLALFLEIFVLSL   86 (350)
Q Consensus        10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~   86 (350)
                      .++.+|.+++++++++||..+++.|.. ++ ++|.++.++|+.++.+++.++...++++..  + ..+++++. ....+.
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHH
Confidence            356789999999999999999999985 55 999999999999999988777654422111  0 11333333 344666


Q ss_pred             HHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 018804           87 VGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNP  166 (350)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  166 (350)
                      ++.+.++.++++|++++++++++++.++.|+++.+++++++|||++++      ++.+++++++|++++...++      
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~------  148 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG------  148 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC------
Confidence            668889999999999999999999999999999999999999999999      99999999999999864211      


Q ss_pred             CCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q 018804          167 GHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWRI  245 (350)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (350)
                                 +.       ..++++++++|+.|.+..|+..++.. +....+.+....+.+...+.   .......+..
T Consensus       149 -----------~~-------~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  207 (296)
T PRK15430        149 -----------SL-------PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQ  207 (296)
T ss_pred             -----------Cc-------cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccC
Confidence                       00       14578899999999999888754321 12222333333333222111   1111111111


Q ss_pred             cchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804          246 GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       246 ~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~  325 (350)
                      .+...+..++..|+ .+.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+.+....
T Consensus       208 ~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        208 NPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             CcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            11112334444454 68899999999999999999999999999999999999999999999999999998887776543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=3.1e-31  Score=234.50  Aligned_cols=258  Identities=17%  Similarity=0.264  Sum_probs=219.4

Q ss_pred             HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 018804           26 YTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSP  105 (350)
Q Consensus        26 ~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  105 (350)
                      ||.+++..|...++..++....+.|...+.+++.++...  +     .+++++.+....|.++..+++.++++|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            889999999988766899999999999998888776432  2     245567788888888899999999999999999


Q ss_pred             chhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhh
Q 018804          106 TFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLK  185 (350)
Q Consensus       106 ~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
                      ++++++.+++|+++.+++++++|||++++      +++|++++++|+.++... +                  +......
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~~-~------------------~~~~~~~  128 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLSD-G------------------NLSINPA  128 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhccC-C------------------cccccHH
Confidence            99999999999999999999999999999      999999999999998632 1                  0112367


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGL  264 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~  264 (350)
                      |+.+++.++++|+.+.+..|+..++.+ ++.....+.+..+.+...+.....++.. .   .+...|..+++.+++++.+
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988762 2344555677788888777766543221 1   1345677788889999999


Q ss_pred             HHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804          265 IVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL  319 (350)
Q Consensus       265 ~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~  319 (350)
                      ++.+|++++++.++.+++.+.+++|+++++++++++||+++..+++|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999886

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-30  Score=235.17  Aligned_cols=284  Identities=14%  Similarity=0.122  Sum_probs=222.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHH
Q 018804           17 LLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMY   96 (350)
Q Consensus        17 ~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   96 (350)
                      ++.+...++.....+.+|++.++-..|..+++.|+.++.+.+.+.. ..+.+++++.+++++...+..|++ ..+++.+.
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~   82 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIV-HTIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHH
Confidence            4455556666667788999988635689999999998877765552 122233446778899999999999 68889999


Q ss_pred             HHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCccc
Q 018804           97 FASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRN  176 (350)
Q Consensus        97 ~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~  176 (350)
                      +++++|+++++++++.++.|+++++++++++|||++++      ++.+++++++|+.+...  +                
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~----------------  138 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T----------------  138 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C----------------
Confidence            99999999999999999999999999999999999999      99999999999987632  1                


Q ss_pred             chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--hcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc---ccc-----c
Q 018804          177 NIIQEQWLKGSFLTIASSITWSAMYIMQAITLK--RYPAQLSLTTWMCFLGAAQSAVFTVIVARKPAD---WRI-----G  246 (350)
Q Consensus       177 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~-----~  246 (350)
                        +......|++++++++++|++|.+..|+..+  +. |+...+.++...+.+..+|.....+.....   +..     .
T Consensus       139 --~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~  215 (302)
T TIGR00817       139 --ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVN  215 (302)
T ss_pred             --cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccC
Confidence              1112256999999999999999999999987  56 889999999999999999887765431100   000     0


Q ss_pred             chhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          247 LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       247 ~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      ....+...+..++.+....+.++++++++.++++.+...+++|++++++|++++||++|..+++|.+++++|++++.+.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            00112112233332333333466689999999999999999999999999999999999999999999999999998665


Q ss_pred             cCC
Q 018804          327 EGD  329 (350)
Q Consensus       327 ~~~  329 (350)
                      .++
T Consensus       296 ~~~  298 (302)
T TIGR00817       296 AQK  298 (302)
T ss_pred             ccC
Confidence            443

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.97  E-value=1.3e-28  Score=219.80  Aligned_cols=275  Identities=13%  Similarity=0.163  Sum_probs=202.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhc-cccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804           16 LLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLE-RKIRPKLTLALFLEIFVLSLVGVTLTLN   94 (350)
Q Consensus        16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   94 (350)
                      .++.++++++|+..++..|...++ -++.  .+++.....+.+.|+...+. ++.++..+ ++++.....+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence            567889999999999999966554 3443  46677777777777765432 22222233 3344455555555888999


Q ss_pred             HHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804           95 MYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ  174 (350)
Q Consensus        95 ~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  174 (350)
                      ++++++++.+++.++++.++.|+++.+++++++|||++++      +++|+.+++.|+.++...+.              
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~~--------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSRF--------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcccc--------------
Confidence            9999999999999999999999999999999999999999      99999999999998864211              


Q ss_pred             ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHH-HHHHHHHh-cCCccccccchhhHH
Q 018804          175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQS-AVFTVIVA-RKPADWRIGLNIDLW  252 (350)
Q Consensus       175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~~~~~~~~~  252 (350)
                         .  .....|+.++++++++|+.|.+..|+..++. ++..........+.+.. .++..... .+...+. .....++
T Consensus       139 ---~--~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  211 (281)
T TIGR03340       139 ---A--QHRRKAYAWALAAALGTAIYSLSDKAAALGV-PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF-PYARQIL  211 (281)
T ss_pred             ---c--ccchhHHHHHHHHHHHHHHhhhhccccccch-hcccccHHHHHHHHHHHHHHHHHHHHHHhccchh-hhHHHHH
Confidence               0  1113577889999999999999988765544 32221111111222111 22222111 0111111 1223455


Q ss_pred             HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhhee
Q 018804          253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYL  321 (350)
Q Consensus       253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l  321 (350)
                      ..++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            667777788999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.97  E-value=6.5e-28  Score=215.15  Aligned_cols=301  Identities=15%  Similarity=0.164  Sum_probs=235.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccc-cCCccCHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERK-IRPKLTLALFLEIFVLSLVGV   89 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~   89 (350)
                      -.+..++.=..+++-+.+...+.+..+.|.+ |....++-++.-.++..++...++++ +..+..+++|++.++.+++ .
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~-D   89 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL-D   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH-H
Confidence            3455555556667777777888777766666 77777777777777766666555433 2233445678888889999 7


Q ss_pred             HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804           90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP  169 (350)
Q Consensus        90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  169 (350)
                      +.++++.+.|++|++.+.++++.+++.+++++++++++|||+++.      +++|+++++.|+.++...|....      
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~------  157 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSG------  157 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccc------
Confidence            789999999999999999999999999999999999999999999      99999999999999876432211      


Q ss_pred             CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccccch
Q 018804          170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLN  248 (350)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~  248 (350)
                           +++....+..+|+++++.+++.||+++++.++..++. +.........+++.+++.+...+.+. .....++.. 
T Consensus       158 -----~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~-  230 (334)
T PF06027_consen  158 -----SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS-  230 (334)
T ss_pred             -----ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-
Confidence                 1112345668999999999999999999999999988 77778888888888888888776654 222222222 


Q ss_pred             hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ..+..++. ..++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++++.|.+++...+++
T Consensus       231 ~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  231 QVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             hhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            22333332 23356667777788899999999999999999999999999999999999999999999999999977665


Q ss_pred             Ccchh
Q 018804          329 DHQEA  333 (350)
Q Consensus       329 ~~~~~  333 (350)
                      .++++
T Consensus       310 ~~~~~  314 (334)
T PF06027_consen  310 EEEAR  314 (334)
T ss_pred             ccccc
Confidence            54433

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=1.7e-27  Score=217.94  Aligned_cols=284  Identities=14%  Similarity=0.155  Sum_probs=225.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCcc--CHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKL--TLALFLEIFVLSLVG   88 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   88 (350)
                      +.+..++.+....+........|.+++. ++ |..++.+|++++.+++..+.... .+++++.  .++++...+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            4566777788888888889999999998 99 99999999999988765553222 2222333  345778899999996


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH  168 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~  168 (350)
                      .. .+...+.|+++++++.++++.++.|+++++++++++|||++++      ++.+++++++|+.+....          
T Consensus       125 ~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~----------  187 (350)
T PTZ00343        125 LF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVK----------  187 (350)
T ss_pred             HH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheecc----------
Confidence            55 4666779999999999999999999999999999999999999      999999999999998631          


Q ss_pred             CCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC------chhHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018804          169 PPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP------AQLSLTTWMCFLGAAQSAVFTVIVARKP--  240 (350)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--  240 (350)
                               +.+ ....|++++++|+++|++++++.|+..++.+      ++.....+....+.++++|+....+...  
T Consensus       188 ---------~~~-~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~  257 (350)
T PTZ00343        188 ---------ELH-FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV  257 (350)
T ss_pred             ---------cch-hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence                     112 2367999999999999999999999887541      3555666668889999998887554211  


Q ss_pred             cccc----ccchhhHHHHHHHhHhHHHHHHHHHHH----hhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhh
Q 018804          241 ADWR----IGLNIDLWSTIYGGVVVSGLIVFIQLW----CTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGA  312 (350)
Q Consensus       241 ~~~~----~~~~~~~~~~l~~gi~~~~~~~~~~~~----a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~  312 (350)
                      ..+.    ......+..+++ .++.+++++.+++.    +++++++.+.+...+++|+++++++++++||++|+.+++|+
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~  336 (350)
T PTZ00343        258 PVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGM  336 (350)
T ss_pred             HHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHH
Confidence            0110    001111223333 34567888888885    99999999999999999999999999999999999999999


Q ss_pred             HHHhhhheeeeec
Q 018804          313 VVVIGGLYLLLWG  325 (350)
Q Consensus       313 ~li~~g~~l~~~~  325 (350)
                      +++++|+++++.-
T Consensus       337 ~lii~Gv~lYs~~  349 (350)
T PTZ00343        337 AVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999988754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=5.7e-26  Score=200.15  Aligned_cols=248  Identities=9%  Similarity=0.128  Sum_probs=185.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcccc-----CCccCHHH-HHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKI-----RPKLTLAL-FLEIFVLSLV   87 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~   87 (350)
                      +|++++++++++||...++.|. .++ ++|.+++++|++++.+++.++...+++++     .++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 455 99999999999999988877654433211     11122222 4456667777


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG  167 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  167 (350)
                       .++++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|++++...++       
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence             7889999999999999999999999999999999999999999999      99999999999998864211       


Q ss_pred             CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804          168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL  247 (350)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (350)
                                +.       ..+++.++++|+.|.+..|+..++  +....... .........+.... ...........
T Consensus       146 ----------~~-------~~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~  204 (256)
T TIGR00688       146 ----------SL-------PWEALVLAFSFTAYGLIRKALKNT--DLAGFCLE-TLSLMPVAIYYLLQ-TDFATVQQTNP  204 (256)
T ss_pred             ----------Cc-------hHHHHHHHHHHHHHHHHHhhcCCC--CcchHHHH-HHHHHHHHHHHHHH-hccCcccccCc
Confidence                      10       035788999999999998887653  32222111 11122222222211 11111111112


Q ss_pred             hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHH
Q 018804          248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFV  299 (350)
Q Consensus       248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~  299 (350)
                      ...|..+++.|++ +.++|.++++++|+.++++++.+.+++|+++.+++.++
T Consensus       205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            2468888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=5.7e-24  Score=190.89  Aligned_cols=283  Identities=21%  Similarity=0.314  Sum_probs=218.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT   90 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (350)
                      +...+....++..+.|+......|...++..++....+.|...+.+...+..... +... ....+++......+.++..
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~   81 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGL-RPALRPWLLLLLLALLGLA   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-cccc-cccccchHHHHHHHHHHHH
Confidence            3456778888888999999999999877535666666779998888844443221 1111 1122224566666777789


Q ss_pred             HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHH-HHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804           91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAV-VLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP  169 (350)
Q Consensus        91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~-~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  169 (350)
                      .++.+++.++++++++.++++.++.|+++.++++ +++|||+++.      ++.++.+++.|+.++...+..        
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~--------  147 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGG--------  147 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCc--------
Confidence            9999999999999999999999999999999997 7779999999      999999999999999753221        


Q ss_pred             CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHH-HHHHHHHHHHHHHHHHHhcCCccccccch
Q 018804          170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTT-WMCFLGAAQSAVFTVIVARKPADWRIGLN  248 (350)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  248 (350)
                              .... ...|+++++.++++++++.+..|+.. +. ++..... +..........+...  . +..  .....
T Consensus       148 --------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~--~~~~~  211 (292)
T COG0697         148 --------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL--S-GFG--APILS  211 (292)
T ss_pred             --------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh--c-ccc--ccCCH
Confidence                    1111 57899999999999999999999888 44 5455544 333311222222211  1 111  12234


Q ss_pred             hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804          249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~  325 (350)
                      ..+....+.|++++.+++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus       212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            57888899999988899999999999999999999999999999999999999999999999999999999988766

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.93  E-value=8.4e-24  Score=179.70  Aligned_cols=280  Identities=15%  Similarity=0.122  Sum_probs=227.5

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccC---CccCHHHHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR---PKLTLALFLEIFVLSLV   87 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~   87 (350)
                      +..+|++..+.+.++||..+.+.|.. ++ .++.++...|.+.+..+++.+....++.+.   ...+++.+....+.+++
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            35689999999999999999999985 55 999999999999999998887765543221   13456667778888888


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG  167 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  167 (350)
                       ...++..|.+|.....+-+++.-++..|++.++++.+++|||+++.      |+++++++.+||...+...|+      
T Consensus        82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~------  148 (293)
T COG2962          82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS------  148 (293)
T ss_pred             -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC------
Confidence             8999999999999999999999999999999999999999999999      999999999999999875332      


Q ss_pred             CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q 018804          168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGL  247 (350)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (350)
                                    -.    ..++.-+++|+.|...-| ..+-  |+.+-....+..-.+..+...+..++........+
T Consensus       149 --------------lp----wval~la~sf~~Ygl~RK-~~~v--~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~  207 (293)
T COG2962         149 --------------LP----WVALALALSFGLYGLLRK-KLKV--DALTGLTLETLLLLPVALIYLLFLADSGQFLQQNA  207 (293)
T ss_pred             --------------Cc----HHHHHHHHHHHHHHHHHH-hcCC--chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCC
Confidence                          11    233555689999998833 3322  55555555566666666666665554432112234


Q ss_pred             hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      ...+..++..|.+ +++...++..+-|+++-+..+.++|.+|..-.+++.+++||+++..+++..+.+.+|+.++....-
T Consensus       208 ~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         208 NSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             chHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5567777888875 999999999999999999999999999999999999999999999999999999999999886543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=2.6e-23  Score=171.92  Aligned_cols=275  Identities=12%  Similarity=0.067  Sum_probs=230.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804           15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN   94 (350)
Q Consensus        15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   94 (350)
                      ++..++.+...--....+.|..... +.+..++.+|..++.++++++..-    .+.+.+++++......|+. .+..|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvs-Lg~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVS-LGGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHH-HHHHHH
Confidence            6788888888888888899999998 999999999999999998888532    2346788899999999999 888999


Q ss_pred             HHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCc
Q 018804           95 MYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQ  174 (350)
Q Consensus        95 ~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  174 (350)
                      +||.+++.+|.+.+..+.++.|+.+.+++.    +  +.+      +.+.+.+++.|..++.. .++             
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~------d~vwvaLAvlGi~lL~p-~~~-------------  140 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLR------DFVWVALAVLGIWLLLP-LGQ-------------  140 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chh------hHHHHHHHHHHHHhhee-ccC-------------
Confidence            999999999999999999999998776543    1  234      88889999999998863 221             


Q ss_pred             ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHH
Q 018804          175 RNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWST  254 (350)
Q Consensus       175 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (350)
                         +...-...|..+++.++.||+.|.+..+|..+.. +...-....+.++.++.+|+.....    .....++.....-
T Consensus       141 ---~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~a----g~~l~~p~ll~la  212 (292)
T COG5006         141 ---SVWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQA----GPALFSPSLLPLA  212 (292)
T ss_pred             ---CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhc----chhhcChHHHHHH
Confidence               2233447899999999999999999999988765 6667777888889999999887432    2222344467777


Q ss_pred             HHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCC
Q 018804          255 IYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGD  329 (350)
Q Consensus       255 l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~  329 (350)
                      +.++++++++.|.+...++++.+....+++..+||.++.+.+++++||.+|..||+|+..++.+..-..+..+|+
T Consensus       213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            888999999999999999999999999999999999999999999999999999999999999988777655543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.91  E-value=4.8e-22  Score=177.51  Aligned_cols=274  Identities=15%  Similarity=0.138  Sum_probs=207.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804           15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN   94 (350)
Q Consensus        15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   94 (350)
                      +++++++++++||...+..|...  |.++.++.  |..++.+++..+....+++.  +..++.+...+..|++ .+.++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence            47889999999999999999865  58887775  67777777666554433211  2234445556667777 888999


Q ss_pred             HHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccch----hhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804           95 MYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAK----VLGTLVSLAGVTIMTVYKGPAARNPGHP  169 (350)
Q Consensus        95 ~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  169 (350)
                      +++.+.++++.+.+..+.+ +.+++..+.+.+++||+.+++      +    ++|++++++|+.++...+.+..+     
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~-----  143 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG-----  143 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence            9999999999999999988 899999999999999999999      8    99999999998888543211000     


Q ss_pred             CccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHH---HHHHHHHHHHHHHhcCCcccccc
Q 018804          170 PIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCF---LGAAQSAVFTVIVARKPADWRIG  246 (350)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~  246 (350)
                             ++...+...|..++++++++|+.|.+..|+.  ++ +|....+.+..   .+..+..+..   ... .++  .
T Consensus       144 -------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~--~  207 (290)
T TIGR00776       144 -------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPL--K  207 (290)
T ss_pred             -------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---hcc-cch--H
Confidence                   0000223679999999999999999998876  25 77777444444   3333222222   111 122  1


Q ss_pred             chhhHHHHHHHhHhHHHHHHHHHHHhhc-cCCcchhhhhhhHHHHHHHHHHHHHhccccchhhh----hhhHHHhhhhee
Q 018804          247 LNIDLWSTIYGGVVVSGLIVFIQLWCTD-KRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSI----VGAVVVIGGLYL  321 (350)
Q Consensus       247 ~~~~~~~~l~~gi~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~----iG~~li~~g~~l  321 (350)
                       +..++.....|++ ..+++.+|..+.+ +.+++.++.+.+.+|+.+.+++++++||+.++.++    +|+++++.|+.+
T Consensus       208 -~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       208 -KYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             -HHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence             2233334447887 7999999999999 99999999999999999999999999999999999    999999999887


Q ss_pred             eee
Q 018804          322 LLW  324 (350)
Q Consensus       322 ~~~  324 (350)
                      ...
T Consensus       286 ~~~  288 (290)
T TIGR00776       286 LGI  288 (290)
T ss_pred             Hhc
Confidence            643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.89  E-value=1.1e-24  Score=181.12  Aligned_cols=291  Identities=15%  Similarity=0.173  Sum_probs=217.4

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT   90 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (350)
                      +..+|..+..++.+ +....++.+...+  .+|.+..-.|++.-.++-.|....++....  .+......+++.|+.|+.
T Consensus        35 ~p~~gl~l~~vs~f-f~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG~t  109 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYF-FNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMGFT  109 (346)
T ss_pred             CCccCceehhhHHH-HhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhhhh
Confidence            45678888888844 4444444444443  689999999988887777776544332221  111223445667777644


Q ss_pred             HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 018804           91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPP  170 (350)
Q Consensus        91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~  170 (350)
                       +....|||++|.+.++++++.+++|+++.+++|.++|||.++.      +.++..+.+.||+++..+  +. .+.    
T Consensus       110 -gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvRP--pF-lFG----  175 (346)
T KOG4510|consen  110 -GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVRP--PF-LFG----  175 (346)
T ss_pred             -HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEecC--Cc-ccC----
Confidence             6667788999999999999999999999999999999999999      999999999999999743  21 111    


Q ss_pred             ccCcccchh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-ch
Q 018804          171 IHIQRNNII-QEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIG-LN  248 (350)
Q Consensus       171 ~~~~~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~  248 (350)
                      .++++++.. .+....|...++.+++.-+--.+..|++-|+. |......|..+++++.+++.....+    .+..+ ..
T Consensus       176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cg  250 (346)
T KOG4510|consen  176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG----AVQLPHCG  250 (346)
T ss_pred             CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc----ceecCccc
Confidence            111111111 23446778888888888888888889988887 6666666666666666665444322    22222 35


Q ss_pred             hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      ++|+.++.+|++ +++++.+...++|+..+..++++.+.+.+++.+++.++|||.||++.+.|+++++.+.+.....|
T Consensus       251 kdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  251 KDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             cceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            678888888986 78999999999999999999999999999999999999999999999999999999887776544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.88  E-value=4.3e-20  Score=166.43  Aligned_cols=267  Identities=16%  Similarity=0.187  Sum_probs=213.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHH
Q 018804           42 NPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFV  121 (350)
Q Consensus        42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~i  121 (350)
                      .|..+++.++....+...+.....++   ++.++..+...+..+++ ..++..+.+.|++|++.+...++.++.|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKF---PKSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccc---cCCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            48899999999988887776554431   23344456677777888 788999999999999999999999999999999


Q ss_pred             HHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 018804          122 IAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMY  201 (350)
Q Consensus       122 l~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~  201 (350)
                      ++.+++|+|.+..      ++.++++..+|+.+....+.+....          .+........|+++.+.+.++.+...
T Consensus       107 ~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~----------~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen  107 LGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS----------SNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc----------cccccccchhHHHHHHHHHHHHHHHH
Confidence            9999999999999      9999999999999997643321111          01122222349999999999999999


Q ss_pred             HHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHH--HhcCCccc--cccchhhHHHHHHHhHhHHHHHHHHHHHhhccC
Q 018804          202 IMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVI--VARKPADW--RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKR  276 (350)
Q Consensus       202 v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~  276 (350)
                      +++++..++++ ++....++...++.+...+....  .++....+  ....+..+..++...+ ++.+++.+.++..++.
T Consensus       171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~  249 (303)
T PF08449_consen  171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKF  249 (303)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            99999998876 78889999999998888887776  22211111  1222334555555444 6788888889999999


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCC
Q 018804          277 GPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGD  329 (350)
Q Consensus       277 ~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~  329 (350)
                      ++...+++..++.++++++|++++++++++.+|+|.++++.|..++...++|+
T Consensus       250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999998877654

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.85  E-value=4.5e-20  Score=161.11  Aligned_cols=301  Identities=15%  Similarity=0.177  Sum_probs=227.6

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCC--CchHHHHHHHHHHHHHHHHHH-------HhhccccC---------
Q 018804            9 VYLRFKPLLLMVLAQLSYTFLYFITEASFNHGM--NPHVYVTYRHIVAGIAMFPFA-------YFLERKIR---------   70 (350)
Q Consensus         9 ~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~--~p~~~~~~r~~~~~l~l~~~~-------~~~~~~~~---------   70 (350)
                      .+|...|+.++++...+|-.+..+.+...+++-  .|+..++.....-.+.+.++.       ...+|.++         
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            345678999999999999999999999988732  387777665544444444322       11111000         


Q ss_pred             ---------------------------------------------------CccCH------------HHHHHHHHHHHH
Q 018804           71 ---------------------------------------------------PKLTL------------ALFLEIFVLSLV   87 (350)
Q Consensus        71 ---------------------------------------------------~~~~~------------~~~~~~~~~g~~   87 (350)
                                                                         +...+            +.....+....+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                                               00011            223345667777


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPG  167 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  167 (350)
                       ..+.++.++.|+.+++++..+++.+++-+|+..++.++..||++..      +.+++.+.+.|+++++.++.. .+   
T Consensus       169 -WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~-~~---  237 (416)
T KOG2765|consen  169 -WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSK-QN---  237 (416)
T ss_pred             -HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccc-cc---
Confidence             6779999999999999999999999999999999999999999999      999999999999999864321 11   


Q ss_pred             CCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH---HHHHHHHHHHHhc-CCccc
Q 018804          168 HPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLG---AAQSAVFTVIVAR-KPADW  243 (350)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~-~~~~~  243 (350)
                              ++....+...|.++++++++.||+|.++.|+...+.++...+..+...+|   .++..|...+.+. ..+.+
T Consensus       238 --------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F  309 (416)
T KOG2765|consen  238 --------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF  309 (416)
T ss_pred             --------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc
Confidence                    11344556899999999999999999999988877632333333333333   3444444443332 23344


Q ss_pred             cccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       244 ~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      +.++......++..+++++.++-++|.+|.-.+++..+++-+.++.+.+++.+.++-+.++|+.+++|.+.|++|.++++
T Consensus       310 ~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  310 ELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             cCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence            45555567778888899999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ecccC
Q 018804          324 WGKEG  328 (350)
Q Consensus       324 ~~~~~  328 (350)
                      ...+.
T Consensus       390 ~~~~~  394 (416)
T KOG2765|consen  390 ISSEN  394 (416)
T ss_pred             ccccc
Confidence            76544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.81  E-value=4.1e-20  Score=163.11  Aligned_cols=288  Identities=13%  Similarity=0.141  Sum_probs=223.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804           16 LLLMVLAQLSYTFLYFITEASFN--HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL   93 (350)
Q Consensus        16 ~~~~l~~~~~~~~~~~~~k~~~~--~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   93 (350)
                      ..+......+........|+.++  ..--|..++..+...+.+.++.....+..+..+..++..+...+..|++ ..++.
T Consensus        19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~   97 (316)
T KOG1441|consen   19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISH   97 (316)
T ss_pred             HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHH
Confidence            33344444455556667788887  3334778888866677666666554443433333455678889999999 89999


Q ss_pred             HHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccC
Q 018804           94 NMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHI  173 (350)
Q Consensus        94 ~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  173 (350)
                      .+-+.|+++.+++.+..+..++|++++++++++.+|+.+..      .+..+.....||.+.+..               
T Consensus        98 v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~---------------  156 (316)
T KOG1441|consen   98 VLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT---------------  156 (316)
T ss_pred             HhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec---------------
Confidence            99999999999999999999999999999999999999999      999999999999999752               


Q ss_pred             cccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--hcC-chhHHHHHHHHHHHHHHH-HHHHHHhcCCc-cccc-cc
Q 018804          174 QRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLK--RYP-AQLSLTTWMCFLGAAQSA-VFTVIVARKPA-DWRI-GL  247 (350)
Q Consensus       174 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~~~~-~~  247 (350)
                           +..-+..|...+..+.+..+..+++.++..+  +.. ++++...++..++.+.++ |.....+.+.. .+.. ..
T Consensus       157 -----e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~  231 (316)
T KOG1441|consen  157 -----ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPW  231 (316)
T ss_pred             -----cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecccc
Confidence                 2233379999999999999999999999984  333 899999999999999998 77665544322 0011 11


Q ss_pred             hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          248 NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       248 ~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      .......++.. ++...-+...+..+.+++|.+.++.+...-++.++.|+++|+++.|+.+..|+++.++|+++|++.|.
T Consensus       232 ~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  232 FVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             chhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            11233333333 34445556677889999999999999999999999999999999999999999999999999998876


Q ss_pred             CCcc
Q 018804          328 GDHQ  331 (350)
Q Consensus       328 ~~~~  331 (350)
                      ++++
T Consensus       311 ~~~~  314 (316)
T KOG1441|consen  311 KEKK  314 (316)
T ss_pred             hhhc
Confidence            6543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.8e-15  Score=132.71  Aligned_cols=299  Identities=14%  Similarity=0.113  Sum_probs=222.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCC---CCchHHHHHHHHHHHHHHHHHHHhhccc----cCC------ccCHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHG---MNPHVYVTYRHIVAGIAMFPFAYFLERK----IRP------KLTLALFLE   80 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~------~~~~~~~~~   80 (350)
                      ...+.++...+.++......|+....+   +.|...++.--++-.+++....+...|+    ..+      ...+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            667778888889999999999987764   6677888887777777777766554322    111      123456777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccC
Q 018804           81 IFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKG  160 (350)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~  160 (350)
                      ..+.+++ +.+.+.++|.++.+.+++..++..++-.+.|+++..+++++|+++.      ||.++.+.++|+.++-.+..
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            8888888 8999999999999999999999999999999999999999999999      99999999999999953212


Q ss_pred             CCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHH-HHHHHHHHHHHHHHHHHHhcC
Q 018804          161 PAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLT-TWMCFLGAAQSAVFTVIVARK  239 (350)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~  239 (350)
                      +..+         +.++....+...|....+.+++..+...++..|.+|+...+..+. ....++|.++.+...+..+.+
T Consensus       168 ~~~~---------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~  238 (345)
T KOG2234|consen  168 SPTG---------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGE  238 (345)
T ss_pred             CCCC---------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            1111         111234566689999999999999999999999998865444444 344555555555555433322


Q ss_pred             CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804          240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL  319 (350)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~  319 (350)
                      ...|... ...|-...+.-++..+.+-.+...-+|+.+-..=+....+..+++.+.++.++|-.||....+|..+++.++
T Consensus       239 ~i~~~gf-f~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si  317 (345)
T KOG2234|consen  239 AINEYGF-FYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSI  317 (345)
T ss_pred             ccccCCc-cccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHH
Confidence            1111111 112222233334455666667777888888888888888999999999999999999999999999999999


Q ss_pred             eeeeecccCC
Q 018804          320 YLLLWGKEGD  329 (350)
Q Consensus       320 ~l~~~~~~~~  329 (350)
                      .++...+.++
T Consensus       318 ~lY~~~P~~~  327 (345)
T KOG2234|consen  318 FLYSLYPARD  327 (345)
T ss_pred             HHhhcCCccc
Confidence            9999554443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.3e-16  Score=130.93  Aligned_cols=262  Identities=11%  Similarity=0.083  Sum_probs=201.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHH
Q 018804           43 PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVI  122 (350)
Q Consensus        43 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il  122 (350)
                      ...+++++++...++--++..++++.   +.+...-+.....++- +.+.....+.|++|.|-....+-.++-|+=++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            45667777777777754443333221   2222223333344444 5666677789999999999999999999999999


Q ss_pred             HHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH
Q 018804          123 AVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI  202 (350)
Q Consensus       123 ~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v  202 (350)
                      +.++.+++.++.      +...++++++||.+....++...+             ........|.++.+++-..-++...
T Consensus       129 GVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv~g-------------~e~~t~g~GElLL~lSL~mDGlTg~  189 (337)
T KOG1580|consen  129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKVGG-------------AEDKTFGFGELLLILSLAMDGLTGS  189 (337)
T ss_pred             ehhhhcccccHH------HHHHHHHHHHHHHHhhccccccCC-------------CcccccchHHHHHHHHHHhcccchh
Confidence            999999999999      999999999999999865444333             2334457899999999999999999


Q ss_pred             HHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhc--CCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcc
Q 018804          203 MQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVAR--KPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPV  279 (350)
Q Consensus       203 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~  279 (350)
                      .+.+....+. ..-.++.+..+++.+.+..-.++.+.  ++..+....+..|+-+...++ ++++++++.+.-....+|.
T Consensus       190 ~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPL  268 (337)
T KOG1580|consen  190 IQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPL  268 (337)
T ss_pred             HHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCe
Confidence            9888877654 56678888888888777665554432  122223344567888888887 7999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ..+++..++-.++++.|.++++.+++..||+|..+++.++..=....++
T Consensus       269 tCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  269 TCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             eEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            9999999999999999999999999999999999999998775544333

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.70  E-value=5.1e-15  Score=128.13  Aligned_cols=231  Identities=16%  Similarity=0.177  Sum_probs=172.4

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804           73 LTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV  152 (350)
Q Consensus        73 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv  152 (350)
                      .++++..+..+.+++ +.+.+.+.+.++++.+++...++.++..+++++++++++|+|+++.      ||.++.+.++|+
T Consensus        12 ~~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv   84 (244)
T PF04142_consen   12 KSPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGV   84 (244)
T ss_pred             HhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHH
Confidence            466788899999999 9999999999999999999999999999999999999999999999      999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchh-HHHHHHHHHHHHHHHH
Q 018804          153 TIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQL-SLTTWMCFLGAAQSAV  231 (350)
Q Consensus       153 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~  231 (350)
                      .++-....+.  .+...+.+ ...+....+...|.++.+.++++.++..++.+|..|+.+.+. ..+......+.++.++
T Consensus        85 ~lv~~~~~~~--~~~~~~~~-~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~  161 (244)
T PF04142_consen   85 VLVQLSSSQS--SDNSSSSS-VHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL  161 (244)
T ss_pred             heeecCCccc--cccccccc-cccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence            9985422211  10000000 000123455689999999999999999999999999875333 3444445566666655


Q ss_pred             HHHHHhcC-CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhh
Q 018804          232 FTVIVARK-PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIV  310 (350)
Q Consensus       232 ~~~~~~~~-~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~i  310 (350)
                      .....+.+ ..+......  +-...+.-++.++++-.+....+|+.+...=+.....+.+.+.+.++.+||.++|....+
T Consensus       162 ~~~~~~~~~~~~~g~f~G--~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l  239 (244)
T PF04142_consen  162 ALLLSDGSAISESGFFHG--YSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL  239 (244)
T ss_pred             HHhcccccccccCCchhh--cchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence            54433221 111111111  111222234456667777888999999999999999999999999999999999999999


Q ss_pred             hhHHH
Q 018804          311 GAVVV  315 (350)
Q Consensus       311 G~~li  315 (350)
                      |+.++
T Consensus       240 g~~~V  244 (244)
T PF04142_consen  240 GAALV  244 (244)
T ss_pred             heecC
Confidence            98764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.69  E-value=1.1e-15  Score=130.46  Aligned_cols=265  Identities=13%  Similarity=0.177  Sum_probs=211.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHH
Q 018804           42 NPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFV  121 (350)
Q Consensus        42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~i  121 (350)
                      ++....+.+.+.+.+.-...+.+++++   ...++.++.....++. +.++..+.+.|++|++-....+-.++--+=+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~t-n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFT-NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHH-hhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            477778888888877765554433222   3344457777888888 778999999999999988888888877777789


Q ss_pred             HHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 018804          122 IAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMY  201 (350)
Q Consensus       122 l~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~  201 (350)
                      .+.++.|.|.+..      +.....++-+|+.+....+.+.           +.++..+.+...|..+....-+.-++.+
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-----------s~~~~g~~ns~~G~~Ll~~~L~fDgfTn  188 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-----------SSSKSGRENSPIGILLLFGYLLFDGFTN  188 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-----------CccccCCCCchHhHHHHHHHHHHHhhHH
Confidence            9999999999999      9999999999999987653321           1112444566899999999999999999


Q ss_pred             HHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcC--CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCc
Q 018804          202 IMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARK--PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGP  278 (350)
Q Consensus       202 v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~  278 (350)
                      ..++++.++++ ++..++++..+++.+......+..+..  .-.+-..++..++-++.... ++++++.+.++.+++.++
T Consensus       189 ~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGs  267 (327)
T KOG1581|consen  189 ATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGS  267 (327)
T ss_pred             hHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhccc
Confidence            99999999876 889999999999998888774422221  11222334556666766665 688999999999999999


Q ss_pred             chhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          279 VFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       279 ~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      .+.+.+..++-+++++++.+++|.+++..|++|..+++.|+.+-..-+++
T Consensus       268 lt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  268 LTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999887655544

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.68  E-value=4.5e-16  Score=115.69  Aligned_cols=135  Identities=16%  Similarity=0.241  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC-ccCHHHHHHHHHHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-KLTLALFLEIFVLSLVGVTLT   92 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   92 (350)
                      ...+++++++++++..+++.|...+. +||...++.|..+...++..+....++.+.. ..+.|.|..+.+.|+. .+++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence            45789999999999999999999986 9999999999999999998888765543322 3577778888888877 7999


Q ss_pred             HHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804           93 LNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        93 ~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      +.+||.|++..+++.+..+..++|+++++++++++|||+|..      +++|+++..+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      9999999999998874

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.67  E-value=3.6e-17  Score=135.75  Aligned_cols=287  Identities=15%  Similarity=0.146  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      .++..+.=+-.++-......+.+..+.|++ |...+|..+..-+++..+++..|+  +.   -...|...++.+++ -+=
T Consensus        17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~---~~~~~~hYilla~~-DVE   90 (336)
T KOG2766|consen   17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KY---IKAKWRHYILLAFV-DVE   90 (336)
T ss_pred             hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HH---HHHHHHHhhheeEE-eec
Confidence            333333333333333344444444444344 777788888888888888876643  22   22335557777887 566


Q ss_pred             HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCc
Q 018804           92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPI  171 (350)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~  171 (350)
                      ++++...|.||++...+..+-+-..+.+.+++|+++|.|.++.      ++.|+++++.|++++...+-..         
T Consensus        91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a---------  155 (336)
T KOG2766|consen   91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA---------  155 (336)
T ss_pred             ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc---------
Confidence            8888899999999999999999999999999999999999999      9999999999999997643211         


Q ss_pred             cCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhH
Q 018804          172 HIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDL  251 (350)
Q Consensus       172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  251 (350)
                         ++.....+..+|+++.++++-+||+.++....+.|+. |....+....++|++++.+-..+...+.....+.    +
T Consensus       156 ---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~----~  227 (336)
T KOG2766|consen  156 ---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVSTLHWD----S  227 (336)
T ss_pred             ---ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh----H
Confidence               1113456668999999999999999999999999999 8888888999999999998844322222222211    2


Q ss_pred             HHHHHH-hHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804          252 WSTIYG-GVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH  330 (350)
Q Consensus       252 ~~~l~~-gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~  330 (350)
                      -...++ ..++.++-|.+.-..+|..+++..++-..+.-.+++++  ..||-+.+|...+..+.+..|.+++..+++.+.
T Consensus       228 ~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~  305 (336)
T KOG2766|consen  228 AIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEE  305 (336)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcH
Confidence            222221 23344445555556789999999999999999999998  677778999999999999999999976554433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.64  E-value=1e-13  Score=120.13  Aligned_cols=289  Identities=13%  Similarity=0.101  Sum_probs=223.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHH--HHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMN-PHVYV--TYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG   88 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~--~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (350)
                      ...+...++.-++.-....+..|+...+ .+ |..+.  ++|.+...+.+...-..+ --+.++.+++..++++...++ 
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-lv~~~~l~~~~~kk~~P~~~l-   86 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLG-LVNFRPLDLRTAKKWFPVSLL-   86 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhc-eeecCCcChHHHHHHccHHHH-
Confidence            4455666666777777788889988876 33 44444  478888877766653322 122457889999999999999 


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH  168 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~  168 (350)
                      +.+....--.+++|.++...+++.+.+|+++++....++|.|++.+      .+.++...+.|.......          
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~----------  150 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT----------  150 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc----------
Confidence            7888888889999999999999999999999999999999999988      999999999998877542          


Q ss_pred             CCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhc-C---Cccc
Q 018804          169 PPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVAR-K---PADW  243 (350)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~  243 (350)
                                +..-...|..+++...++.+.+.+..|+..+..+ +.....++..+.+.........+.++ +   .+..
T Consensus       151 ----------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~  220 (314)
T KOG1444|consen  151 ----------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFD  220 (314)
T ss_pred             ----------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcc
Confidence                      1222245899999999999999999998876654 66788899999998888888877664 1   1111


Q ss_pred             cccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          244 RIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       244 ~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      .+.....+..+...++.+.++.| +-.++.+..++...++.+..+...+.+...+..|++.++...+|..+-++|-++++
T Consensus       221 ~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  221 NWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             cccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            12233456667777776666666 55689999999999999977777788878788888999999999999999999998


Q ss_pred             ecccCCc
Q 018804          324 WGKEGDH  330 (350)
Q Consensus       324 ~~~~~~~  330 (350)
                      ..+.+++
T Consensus       300 ~~~~~~k  306 (314)
T KOG1444|consen  300 YATFRKK  306 (314)
T ss_pred             hhhhhhc
Confidence            7764433

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.64  E-value=6.4e-14  Score=119.70  Aligned_cols=254  Identities=13%  Similarity=0.151  Sum_probs=194.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhcccc---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHH
Q 018804           43 PHVYVTYRHIVAGIAMFPFAYFLERKI---RPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVT  119 (350)
Q Consensus        43 p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~  119 (350)
                      |..++.++.++-.++-.......+++.   +-..+|++..+-+....++.++...+-+++++|++.+..++..+..++|+
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            777888887777766555544444322   23567777776555555558889999999999999999999999999999


Q ss_pred             HHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHH
Q 018804          120 FVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSA  199 (350)
Q Consensus       120 ~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  199 (350)
                      .+++.++.-|++++.      -..-+.++.+|+.+++.. +                   .+-...|.++...++++-++
T Consensus       125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~K-s-------------------Tqf~i~Gf~lv~~aS~~sGl  178 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTYK-S-------------------TQFNIEGFFLVLAASLLSGL  178 (349)
T ss_pred             HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEec-c-------------------cceeehhHHHHHHHHHhhhh
Confidence            999999999999998      788888888888888763 2                   12236899999999999999


Q ss_pred             HHHHHHHHhhhcC----chhHHHHHHHHHHHHHHHHHHHHHhcCCc-----cccccchh-hHHHHHHHhHhHHHHHHH--
Q 018804          200 MYIMQAITLKRYP----AQLSLTTWMCFLGAAQSAVFTVIVARKPA-----DWRIGLNI-DLWSTIYGGVVVSGLIVF--  267 (350)
Q Consensus       200 ~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~l~~gi~~~~~~~~--  267 (350)
                      -..+.+..+++.+    +|............+.++|..+.++....     .+...++. .+..+...+ +++..++.  
T Consensus       179 RW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l~  257 (349)
T KOG1443|consen  179 RWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLLE  257 (349)
T ss_pred             hHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHHH
Confidence            8888888887764    78888888888888999999888875221     12222221 222222222 23334443  


Q ss_pred             -HHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          268 -IQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       268 -~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                       ..+.-+.+++....++.+...-+-..+++.++.+|.++...|.|..+...|+..+.
T Consensus       258 ~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  258 FSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence             33456888999999999999999999999999999999999999999999999984

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.63  E-value=8.7e-15  Score=108.86  Aligned_cols=136  Identities=16%  Similarity=0.127  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI  265 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~  265 (350)
                      ..++++++++++++..++.|.-.|+. ||...+..+.+...+.+......... .......+++.|.++...|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence            46889999999999999999999988 99999999999888887777665442 11222236678989988885 79999


Q ss_pred             HHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804          266 VFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW  324 (350)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~  324 (350)
                      ..+|++|+|..+++++..+.-++|+++++++++++||++|..+++|+.++.+|.+++..
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999998864

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.59  E-value=8.2e-15  Score=114.36  Aligned_cols=125  Identities=21%  Similarity=0.423  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 018804           24 LSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYT  103 (350)
Q Consensus        24 ~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  103 (350)
                      ++||...++.|...++ .||...+++|+..+.+ ++++....+++.....+++++......|.++..+++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4689999999999998 9999999999999998 6666655555444567788888899999997899999999999999


Q ss_pred             CcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804          104 SPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus       104 ~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      +++.++++.+++|+++.+++++++||++++.      +++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999      9999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=4.1e-15  Score=124.85  Aligned_cols=266  Identities=14%  Similarity=0.076  Sum_probs=206.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhcccc----C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchh
Q 018804           42 NPHVYVTYRHIVAGIAMFPFAYFLERKI----R--PKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTV  115 (350)
Q Consensus        42 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~  115 (350)
                      .|..+++++++....+...+.....+-.    .  .+.+.+..+......++ +.+...+-+++++|.+++...+-.++.
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLt  138 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLT  138 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchh
Confidence            4888999999999999888775543321    1  23556666777777777 777888888999999999999999999


Q ss_pred             hHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHH
Q 018804          116 AAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSI  195 (350)
Q Consensus       116 pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  195 (350)
                      .+|+++++++++|++-+..      -..++.++++|-.+=..++|                 ..+.-...|.++++.|++
T Consensus       139 tvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~-----------------~~~~ls~~GvifGVlaSl  195 (347)
T KOG1442|consen  139 TVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEG-----------------STGTLSWIGVIFGVLASL  195 (347)
T ss_pred             hhHHHHhHHhhcccccccc------cceeehhheehheecccccc-----------------ccCccchhhhHHHHHHHH
Confidence            9999999999999999998      88888888888655432211                 122334689999999999


Q ss_pred             HHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCcccc---ccchhhHHHHHHHhHhHHHHHHHHHHH
Q 018804          196 TWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWR---IGLNIDLWSTIYGGVVVSGLIVFIQLW  271 (350)
Q Consensus       196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~gi~~~~~~~~~~~~  271 (350)
                      +-|+..+..|+...... .-...+.+..+.+.++.+|...+.++-..-+.   .+....|..+...|+++..++| .-.+
T Consensus       196 ~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy-vTg~  274 (347)
T KOG1442|consen  196 AVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY-VTGW  274 (347)
T ss_pred             HHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh-eeeE
Confidence            99999999997766544 45667889999999999999887654211111   2233356666666665555554 3446


Q ss_pred             hhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCcch
Q 018804          272 CTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDHQE  332 (350)
Q Consensus       272 a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~~~  332 (350)
                      -+|.++|.+-.+-....-....+++..+++|..+...|-|-.++++|..++.+.|++++++
T Consensus       275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999999999999999887665543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.48  E-value=1.4e-13  Score=107.25  Aligned_cols=125  Identities=19%  Similarity=0.415  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhc
Q 018804          195 ITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTD  274 (350)
Q Consensus       195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~  274 (350)
                      ++||.+.+..|+..++. |+.....+++..+.+ .++...+.....  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            46899999999999998 999999999999988 666666554432  22334556777888888888999999999999


Q ss_pred             cCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          275 KRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       275 ~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      +.+++.++.+.+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.42  E-value=1.5e-10  Score=99.97  Aligned_cols=253  Identities=14%  Similarity=0.141  Sum_probs=175.0

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhccccCCccC--HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhc-hhh
Q 018804           40 GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLT--LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVN-TVA  116 (350)
Q Consensus        40 g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p  116 (350)
                      |-+|.+-.+.-.+-+.++ ........+   +..+  .+.+...++.|++ ..+++..++.|.++.+++.+.++.. ++-
T Consensus         9 gG~~~~Q~lG~t~Gali~-alv~~~~~~---p~~~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QL   83 (269)
T PF06800_consen    9 GGKPANQILGTTIGALIF-ALVVFLFRQ---PAFSMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQL   83 (269)
T ss_pred             CCcHHHHHHHHHHHHHHH-HHHHHHHhC---CCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence            445655555433333333 333333333   2333  4778888999999 8889999999999999999998885 788


Q ss_pred             HHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHH
Q 018804          117 AVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSIT  196 (350)
Q Consensus       117 i~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  196 (350)
                      +.+.+++.++++|--+..++  .....++++.++|+.+.+..+.+....            +...+...|....+++.+.
T Consensus        84 vg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~~------------~~~~~~~kgi~~Ll~stig  149 (269)
T PF06800_consen   84 VGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDKS------------SSKSNMKKGILALLISTIG  149 (269)
T ss_pred             HHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcccccccccc------------ccccchhhHHHHHHHHHHH
Confidence            88999999999997766511  112457888899998887643221100            1234557899999999999


Q ss_pred             HHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccC
Q 018804          197 WSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKR  276 (350)
Q Consensus       197 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~  276 (350)
                      |..|.+.-|..  +. ++.....-+.+...+....+..+....  .   .....|.. +..|+ .-.++..++..+.++.
T Consensus       150 y~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~---~~k~~~~n-il~G~-~w~ignl~~~is~~~~  219 (269)
T PF06800_consen  150 YWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--F---FEKKSWKN-ILTGL-IWGIGNLFYLISAQKN  219 (269)
T ss_pred             HHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--c---cccchHHh-hHHHH-HHHHHHHHHHHhHHhc
Confidence            99999996642  23 666665555544444444444432111  1   11222333 33455 3678888999999999


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHHhccccchhh----hhhhHHHhhhhee
Q 018804          277 GPVFATMFNPVSTILVAILAYFVFGEKLFLGS----IVGAVVVIGGLYL  321 (350)
Q Consensus       277 ~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~----~iG~~li~~g~~l  321 (350)
                      +....=.+.-+.++++.+.+.+++||+=+..+    ++|+++++.|.++
T Consensus       220 G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  220 GVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             cchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999988654    5688888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.40  E-value=2.1e-12  Score=108.85  Aligned_cols=266  Identities=12%  Similarity=0.094  Sum_probs=184.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CcchhhhhhchhhHHHHHH
Q 018804           44 HVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYT-SPTFVASVVNTVAAVTFVI  122 (350)
Q Consensus        44 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~~i~~~~pi~~~il  122 (350)
                      -.+++.++++-..--+++---. ...+++.+.|++......    +...+.+-++++++- +...-.++.+-.++.++++
T Consensus        34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            5667777766555544432100 111245556655554433    233455556888854 7788889999999999999


Q ss_pred             HHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH
Q 018804          123 AVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI  202 (350)
Q Consensus       123 ~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v  202 (350)
                      +++++|+|.+.+      |+.++++.-+|+++.+..+...... -.++-+..+...+...+..|+.+...+.+..|.-.+
T Consensus       109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~-~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgi  181 (330)
T KOG1583|consen  109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS-KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGI  181 (330)
T ss_pred             HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh-hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999      9999999999999998653322211 111111222224556778999999999999999999


Q ss_pred             HHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCC-cc--------------ccccchhhHHHHHHHhHhHHHHHH
Q 018804          203 MQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKP-AD--------------WRIGLNIDLWSTIYGGVVVSGLIV  266 (350)
Q Consensus       203 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~l~~gi~~~~~~~  266 (350)
                      +++...|+++ ++-...+|.    -.+.+|..++..++. .+              .....+..|+.++... +.+..+.
T Consensus       182 yqE~~Y~kyGKh~~EalFyt----H~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~-L~Qy~Ci  256 (330)
T KOG1583|consen  182 YQETTYQKYGKHWKEALFYT----HFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV-LTQYFCI  256 (330)
T ss_pred             HHHHHHHHhcCChHHHHHHH----HHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHH-HHHHHHH
Confidence            9998888876 667766665    445556665544321 01              1111234565555433 3455555


Q ss_pred             HHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          267 FIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      --.+....+.++.++++...++-.++.++|.+.|+.+++++.|+|..++..|..++....
T Consensus       257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            555566778888999999999999999999999999999999999999999988887443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.37  E-value=1.9e-11  Score=107.87  Aligned_cols=133  Identities=19%  Similarity=0.354  Sum_probs=115.0

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc--hHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNP--HVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG   88 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (350)
                      ...+|..+.++++++|+...+..|...++ .++  .....+++.++.+++.++.+..++.  +..+.+++...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            34689999999999999999999998875 664  4555578999999988887654332  233667777888899998


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV  152 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv  152 (350)
                      ..+++.++++++++.+++.++.+.++.|+++.++++++++|++++.      ++.|..+.+.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence            8999999999999999999999999999999999999999999999      999999999986

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.35  E-value=1.4e-11  Score=100.78  Aligned_cols=275  Identities=12%  Similarity=0.147  Sum_probs=194.3

Q ss_pred             HHHHHHHHhhhC-CCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 018804           28 FLYFITEASFNH-GMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSP  105 (350)
Q Consensus        28 ~~~~~~k~~~~~-g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  105 (350)
                      ++.+..|+..+. |++ -+.+.+.+.+...+-+..+-..+..    ..+.++...++..+++ .....+.--.+++|.+.
T Consensus        20 lmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~----~fR~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~v   94 (309)
T COG5070          20 LMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV----EFRLTKAKKWFPISFL-LVVMIYTSSKSLQYLAV   94 (309)
T ss_pred             HHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh----heehhhhhhhcCHHHH-HHHHHHhcccceeeeee
Confidence            455566766553 333 2455566666555554444322211    2223334444555555 44455555679999999


Q ss_pred             chhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCccCcccchhhhhhhh
Q 018804          106 TFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIHIQRNNIIQEQWLK  185 (350)
Q Consensus       106 ~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
                      ...+++.+++.+.++.....++|.|.+-.      +..+.++.++.-+...+.+.+...             -..+..+.
T Consensus        95 piYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~~-------------~~~~~lN~  155 (309)
T COG5070          95 PIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQASA-------------FKAQILNP  155 (309)
T ss_pred             eHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHHH-------------HHhcccCC
Confidence            99999999999999999999999999999      999999988888877654221110             12234468


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcC-Cccc-cccchhhHHHHHHHhHhHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARK-PADW-RIGLNIDLWSTIYGGVVVS  262 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~gi~~~  262 (350)
                      |.+++....+..+.+....|+..+-.. .....++|..+.+..+++.+...+++. +... +..+.....++...|+. +
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-s  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-S  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-H
Confidence            999999999999999998887755432 556778899999999999999888752 2211 11122234556666664 4


Q ss_pred             HHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          263 GLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      ..--++-.|+++.++.+..++++.++-.-..+.|.++|||+.+...+..+.+-..+..++...+.
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks  299 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS  299 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334667899999999999999999999999999999999999999998887777666665543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.34  E-value=2.4e-11  Score=102.79  Aligned_cols=277  Identities=14%  Similarity=0.149  Sum_probs=191.4

Q ss_pred             HHHHHHHHHhhh---CCCC----chHHHHHHHHHHHHHHHHHHHhhccccCC---------------ccCHHHHHHHHHH
Q 018804           27 TFLYFITEASFN---HGMN----PHVYVTYRHIVAGIAMFPFAYFLERKIRP---------------KLTLALFLEIFVL   84 (350)
Q Consensus        27 ~~~~~~~k~~~~---~g~~----p~~~~~~r~~~~~l~l~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   84 (350)
                      +.+.+..|++-+   +|.+    |+..+..-++--++.++.+.+++.+...+               +.++   ...+.-
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl~P   92 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP---VLFLPP   92 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc---ceecCh
Confidence            446667777643   2333    55555555555455556665555442221               1222   223335


Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR  164 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  164 (350)
                      .++ -..+..+.|.++.+++++.-+++.....+|+.+++.-+++.+++..      ||.|+.....|++.+...+  ...
T Consensus        93 al~-Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d--~~~  163 (372)
T KOG3912|consen   93 ALC-DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD--VHL  163 (372)
T ss_pred             HHH-HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee--ccc
Confidence            555 6778889999999999999999999999999999999999999999      9999999999999885431  111


Q ss_pred             CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHHhcCCc--
Q 018804          165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIVARKPA--  241 (350)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--  241 (350)
                      ..++        -.+..+...|+++.+.+-+.-|+.+++.+|..++.. +|.....|.-++|..+...+...+...+.  
T Consensus       164 ~~~p--------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~  235 (372)
T KOG3912|consen  164 VTDP--------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD  235 (372)
T ss_pred             ccCC--------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence            1000        023355689999999999999999999999988876 89999999988885544444443321000  


Q ss_pred             cccccc---hhhHH---------HHHHHhHhHHHHHHHHHHHh----hccCCcchhhhhhhHHHHHHHHHHHHHhccccc
Q 018804          242 DWRIGL---NIDLW---------STIYGGVVVSGLIVFIQLWC----TDKRGPVFATMFNPVSTILVAILAYFVFGEKLF  305 (350)
Q Consensus       242 ~~~~~~---~~~~~---------~~l~~gi~~~~~~~~~~~~a----~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t  305 (350)
                      .+...+   ..+|.         ..+++...+...+..+++.+    .|..++++-.++-.++..+--+++.....|.+.
T Consensus       236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence            000000   00110         11222223334444445433    778888888899999999999999999999999


Q ss_pred             hhhhhhhHHHhhhheeee
Q 018804          306 LGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       306 ~~~~iG~~li~~g~~l~~  323 (350)
                      ..|+.|..+.+.|++++.
T Consensus       316 llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999987

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.34  E-value=6.1e-12  Score=100.93  Aligned_cols=218  Identities=10%  Similarity=0.051  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCC
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPA  162 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~  162 (350)
                      ...++ ....++.|..+++..+++.++.+..+...|+.+++++++|+|+...      ++.+.++++.|++++...+   
T Consensus        58 PF~i~-Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D---  127 (290)
T KOG4314|consen   58 PFSIF-WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD---  127 (290)
T ss_pred             ceEEE-EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc---
Confidence            33444 4568899999999999999999999999999999999999999999      9999999999999997532   


Q ss_pred             CCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC--c-hhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018804          163 ARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP--A-QLSLTTWMCFLGAAQSAVFTVIVARK  239 (350)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~-~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (350)
                                     +.......|+.+++.+++..++|-+..|....+..  + ...+....++--.+...|.....-..
T Consensus       128 ---------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~  192 (290)
T KOG4314|consen  128 ---------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG  192 (290)
T ss_pred             ---------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence                           23345589999999999999999999998877653  2 11112222222223333333322234


Q ss_pred             CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhh
Q 018804          240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGL  319 (350)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~  319 (350)
                      .++|.......|..+...+.+..++. ++.+.++..+.|...++-.....+-....+.++-+-..+.....|..+++.|.
T Consensus       193 VE~~qsFA~~PWG~l~G~A~L~lAFN-~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F  271 (290)
T KOG4314|consen  193 VEHLQSFAAAPWGCLCGAAGLSLAFN-FLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF  271 (290)
T ss_pred             hHHHHHHhhCCchhhhhHHHHHHHHh-hheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            45666555667888887777644444 46788999999999999999999999999976666667888999999999998


Q ss_pred             eeeeecc
Q 018804          320 YLLLWGK  326 (350)
Q Consensus       320 ~l~~~~~  326 (350)
                      .+....+
T Consensus       272 iLiiiP~  278 (290)
T KOG4314|consen  272 ILIIIPE  278 (290)
T ss_pred             Hheeccc
Confidence            8776544

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.31  E-value=1.3e-11  Score=94.31  Aligned_cols=104  Identities=19%  Similarity=0.304  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcccc--CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHH
Q 018804           48 TYRHIVAGIAMFPFAYFLERKI--RPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVV  125 (350)
Q Consensus        48 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~  125 (350)
                      .+|+..+.+++..+...+++.+  .+..+++.+......|.++...++.++++|+++.+ +.++++.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5789999999888877654422  12334455667778888877789999999999999 58899999999999999999


Q ss_pred             HhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804          126 LRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY  158 (350)
Q Consensus       126 ~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  158 (350)
                      ++|||++++      ++.+++++++|++++...
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence            999999999      999999999999999864

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.26  E-value=2.2e-10  Score=92.70  Aligned_cols=138  Identities=20%  Similarity=0.219  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhc-----C-chhHHHHHHHHHHHHHHHHHHHHHhcCCcccc---cc------chhh
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRY-----P-AQLSLTTWMCFLGAAQSAVFTVIVARKPADWR---IG------LNID  250 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~------~~~~  250 (350)
                      |.++++.+.++.+++.+..|+..++.     . ++.....+....+.+..++..++.+.......   ..      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988772     3 89999999999999999999888775321110   00      2234


Q ss_pred             HHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804          251 LWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW  324 (350)
Q Consensus       251 ~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~  324 (350)
                      +..++..|++ ...-+...+..+++++|...++....+.+..++.+++++||++|..+++|+.+.++|.+++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555555554 556666788999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.24  E-value=6.3e-10  Score=99.94  Aligned_cols=137  Identities=12%  Similarity=0.120  Sum_probs=114.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      ...|.++.++++++|+...+..|...++ .++.... +...++.+++.++......  ....+...+...+..|+++.++
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence            3569999999999999999999998766 7887764 4556666777776654322  1234555566667899999999


Q ss_pred             HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804           92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY  158 (350)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  158 (350)
                      ++.+|++++++.+++.++++.+++|+++.++++++++|+++..      +++|.++.+.|+......
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999      999999999999998754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.23  E-value=2.6e-10  Score=101.74  Aligned_cols=277  Identities=14%  Similarity=0.171  Sum_probs=158.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC-ccCHHH-HHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-KLTLAL-FLEIFVLSLVG   88 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~   88 (350)
                      +...|...+++++++.+....+.|....+ .+.                       +..+. ...++. ....++.|.+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence            35679999999999999999999987665 111                       00000 001111 12344555555


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGH  168 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~  168 (350)
                      .+++..+.+.|+.+.|.+.++++..+.-++.++++.+++|||++..      ++.|+.++++|..++... ++.....  
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~--  130 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPI--  130 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCc--
Confidence            6777888889999999999999999999999999999999999999      999999999999988653 3221110  


Q ss_pred             CCccCcccchhhhhhhhHHH-H-HHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHH---HHHHHhcCC-cc
Q 018804          169 PPIHIQRNNIIQEQWLKGSF-L-TIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAV---FTVIVARKP-AD  242 (350)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~-~-~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~-~~  242 (350)
                          .+.++-...-...+.+ + .+.......+.....+|..++  +...........++...+.   ......... .+
T Consensus       131 ----~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~  204 (300)
T PF05653_consen  131 ----HTLDELIALLSQPGFLVYFILVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD  204 (300)
T ss_pred             ----CCHHHHHHHhcCcceehhHHHHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc
Confidence                0000000111111111 1 111111222222222222221  2221111112222211111   111111100 01


Q ss_pred             ccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--ch----hhhhhhHHH
Q 018804          243 WRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKL--FL----GSIVGAVVV  315 (350)
Q Consensus       243 ~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~--t~----~~~iG~~li  315 (350)
                      .....+..|..++.+ +.+........++|+++.+++.+..+.+ .-...+++-|.++++|..  +.    ....|+.++
T Consensus       205 ~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i  283 (300)
T PF05653_consen  205 NQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII  283 (300)
T ss_pred             hhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence            112223344444333 3455666677889999999987775554 556667777888888754  44    335688889


Q ss_pred             hhhheeeeeccc
Q 018804          316 IGGLYLLLWGKE  327 (350)
Q Consensus       316 ~~g~~l~~~~~~  327 (350)
                      +.|++++...|+
T Consensus       284 i~GV~lL~~~~~  295 (300)
T PF05653_consen  284 IIGVFLLSSSKD  295 (300)
T ss_pred             HHhhheeeccCc
Confidence            999999975543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.22  E-value=8.1e-10  Score=93.20  Aligned_cols=226  Identities=12%  Similarity=0.137  Sum_probs=177.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           78 FLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        78 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      |+....++.+ ...+..+-.-++.|++-..-.++.++--+=+.+-+.++-+.|....      +.++..+..+|.++.+.
T Consensus       106 ~rtY~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  106 WRTYVILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTL  178 (367)
T ss_pred             hhHhhhhHhh-hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhh
Confidence            4555555555 4557777778899998777778888766666688999999999999      99999999999999987


Q ss_pred             ccCCCCCCCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC-chhHHHHHHHHHHHHHHHHHHHHH
Q 018804          158 YKGPAARNPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYP-AQLSLTTWMCFLGAAQSAVFTVIV  236 (350)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~  236 (350)
                      .|+.                ..+.-...|..+.-.|-++-|.-.-.+.+..+..+ +...+.++...+|.+..+......
T Consensus       179 ADs~----------------~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT  242 (367)
T KOG1582|consen  179 ADSQ----------------TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT  242 (367)
T ss_pred             cccc----------------cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence            6442                12233368999999999999998888898888876 667777888888888877776655


Q ss_pred             hcCCcccccc---chhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhH
Q 018804          237 ARKPADWRIG---LNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAV  313 (350)
Q Consensus       237 ~~~~~~~~~~---~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~  313 (350)
                      ..-...|+.-   +.+..+..++.+. .+.+++.....-++..++..++.+...+-.+++++|+++|..++|....-|..
T Consensus       243 ge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gl  321 (367)
T KOG1582|consen  243 GELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGL  321 (367)
T ss_pred             ccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhH
Confidence            5444444432   2223445555454 46778888888899999999999999999999999999999999999999999


Q ss_pred             HHhhhheeeeeccc
Q 018804          314 VVIGGLYLLLWGKE  327 (350)
Q Consensus       314 li~~g~~l~~~~~~  327 (350)
                      +++.|+++-.+.++
T Consensus       322 lv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  322 LVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHhhcccCC
Confidence            99999999887763

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.22  E-value=5.2e-10  Score=100.48  Aligned_cols=138  Identities=19%  Similarity=0.194  Sum_probs=116.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      ...|.++.++++++|+......|...+.  ++.....++..++.+.+.++............+.+.+......++++.++
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999999986533  45667788888888888777654332211223567788888899998999


Q ss_pred             HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ++.+|++++++.+++.++++..+.|++++++++++++|+++..      +++|.++.+.|+.+...
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      99999999999999864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.18  E-value=2.4e-08  Score=89.86  Aligned_cols=301  Identities=15%  Similarity=0.085  Sum_probs=181.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHH--Hhhcc---ccCCccCHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFA--YFLER---KIRPKLTLALFLEIFVLSL   86 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~--~~~~~---~~~~~~~~~~~~~~~~~g~   86 (350)
                      -..|++..++++++||..++-.|.. +. . +++..+.-..+-.-++.|+.  .+..+   ......+.+.+...++.|+
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w-~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-KK-W-SWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-CC-C-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            4579999999999999999999983 33 2 33332221111111112211  01001   1112356777888889999


Q ss_pred             HHHHHHHHHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccc-cccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804           87 VGVTLTLNMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLR-NARGMAKVLGTLVSLAGVTIMTVYKGPAAR  164 (350)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~-~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  164 (350)
                      + ..+++..++.++++.+.+.+..+.. ++-+...++..++++|=.+.. .+-.....+|+++.++|+++..........
T Consensus        82 ~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         82 L-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             H-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            9 8999999999999999999986655 888999999999988643111 111223688999999999999762111100


Q ss_pred             CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHH-------HHHHHhhhcCchhHHHHHHHH---HHHHHHH-HHH
Q 018804          165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYI-------MQAITLKRYPAQLSLTTWMCF---LGAAQSA-VFT  233 (350)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v-------~~~~~~~~~~~~~~~~~~~~~---~~~i~~~-~~~  233 (350)
                      .       .+.++....+..+|..+++++++.++.|+.       ..+...+...++.....-+..   .+.++.- ...
T Consensus       161 ~-------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~  233 (345)
T PRK13499        161 K-------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFC  233 (345)
T ss_pred             c-------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            0       000002235668999999999999999994       322211111144444333333   3333222 222


Q ss_pred             HH---HhcCCcccccc--c----hhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhh----hhhhHHHHHHHHHHHHHh
Q 018804          234 VI---VARKPADWRIG--L----NIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFAT----MFNPVSTILVAILAYFVF  300 (350)
Q Consensus       234 ~~---~~~~~~~~~~~--~----~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~pv~~~l~~~~~~  300 (350)
                      .+   .+++.......  +    .+........|+ .=.+++.+|..+-++.+.....    +.+.+..+++.+.+. ++
T Consensus       234 ~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~l  311 (345)
T PRK13499        234 FIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VL  311 (345)
T ss_pred             HHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hh
Confidence            21   11111111111  1    122222344444 3667778888888877654333    444888899999998 59


Q ss_pred             ccccc------hhhhhhhHHHhhhheeeeec
Q 018804          301 GEKLF------LGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       301 ~e~~t------~~~~iG~~li~~g~~l~~~~  325 (350)
                      +|.=+      ...++|++++++|.++....
T Consensus       312 kE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        312 KEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            99866      45678999999998776544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.18  E-value=1.4e-09  Score=99.65  Aligned_cols=138  Identities=9%  Similarity=0.160  Sum_probs=106.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch-HHHHHHHHHHHHHHHHHHHhhccccC----CccCHHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPH-VYVTYRHIVAGIAMFPFAYFLERKIR----PKLTLALFLEIFVLSLV   87 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~-~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   87 (350)
                      ..|.++++.++++|+.+.++.|..... .++. ..+++....+.+.+.+......+...    ...+.. ....+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            458899999999999999999987765 6554 55667777666666555544322111    112222 2224444554


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhcc
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYK  159 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~  159 (350)
                       ..+.+.+|++++++.+++.++++.++.|++++++++++++|++++.      +++|.++++.|+.++...+
T Consensus       266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence             5678899999999999999999999999999999999999999999      9999999999999987543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.18  E-value=4.6e-10  Score=100.99  Aligned_cols=138  Identities=14%  Similarity=0.176  Sum_probs=109.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc--ccchhhHHHHHHHhH
Q 018804          182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWR--IGLNIDLWSTIYGGV  259 (350)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~gi  259 (350)
                      +..+|.++++++++.|+...+..|.. .+. +|....+++..++.++.++......+ .....  ..+...+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence            34689999999999999999999765 556 89999999999998877766543321 11110  00122232 233555


Q ss_pred             hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      ++.+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|++++.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6677889999999999999999999999999999999999999999999999999999988765

>TIGR00688 rarD rarD protein

Probab=99.10  E-value=1.3e-09  Score=96.11  Aligned_cols=136  Identities=10%  Similarity=0.188  Sum_probs=107.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCC---ccccccchhh-HHHHHHHhHh
Q 018804          185 KGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKP---ADWRIGLNID-LWSTIYGGVV  260 (350)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~l~~gi~  260 (350)
                      +|..+.++++++|+...+..|. ..+. +|....+++++.+.+...+......+..   ..++...... +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999997 4456 9999999999999877766554432110   1111111222 3344555554


Q ss_pred             HHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          261 VSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                       ....+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             67888999999999999999999999999999999999999999999999999999987664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.09  E-value=2e-09  Score=96.18  Aligned_cols=133  Identities=15%  Similarity=0.162  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHH
Q 018804          187 SFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIV  266 (350)
Q Consensus       187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~  266 (350)
                      .++.+.++++++...+..|+..++. ++  ...+....+.+...|+...... ...|+..+. .++..+..+.++....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            4678999999999999999887764 43  2355555566666666553211 123332222 33434444555678888


Q ss_pred             HHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804          267 FIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW  324 (350)
Q Consensus       267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~  324 (350)
                      .++++++++.+++.++.+.+++|+++.+++++++||+++..+++|+.++++|+++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999887764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.08  E-value=4.4e-09  Score=94.58  Aligned_cols=134  Identities=10%  Similarity=0.105  Sum_probs=105.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      ...|.+++++++++|+...+..|...++ .++....+   ..+.+.+.+....... .....+...+...+..|+ +.++
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~-~t~~  227 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQ-PAMVFSLPAIIKLLLAAA-AMGF  227 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcC-ccccCCHHHHHHHHHHHH-HHHH
Confidence            3468999999999999999999997665 77765432   2233333332222221 112345666777777775 4788


Q ss_pred             HHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           92 TLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ++.+|++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++++.|+.+...
T Consensus       228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      99999999999988864

>TIGR00803 nst UDP-galactose transporter

Probab=99.05  E-value=3.8e-09  Score=90.96  Aligned_cols=209  Identities=9%  Similarity=-0.050  Sum_probs=128.8

Q ss_pred             CcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCC--------CCCCCCccCcc
Q 018804          104 SPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR--------NPGHPPIHIQR  175 (350)
Q Consensus       104 ~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~--------~~~~~~~~~~~  175 (350)
                      +........+..++++++..+...+||.+..      ++++.++...|++.....+.+...        .....+.. ++
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~-~~   75 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS-SA   75 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC-Cc
Confidence            3445566777888888888888888888888      888888888888754332111100        00000000 00


Q ss_pred             cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHH-HHHHHHHHHHHHHHHhcCC-cccccc-chhhHH
Q 018804          176 NNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWM-CFLGAAQSAVFTVIVARKP-ADWRIG-LNIDLW  252 (350)
Q Consensus       176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~-~~~~~~-~~~~~~  252 (350)
                      .+....+...|....+.+..+-+...+++++..|+.+......... ...+.+.........+.+. ..+... ....+.
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV  155 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH
Confidence            0011124467888888888888888898888776652211111111 1222221111111111110 011100 001111


Q ss_pred             HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804          253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL  322 (350)
Q Consensus       253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~  322 (350)
                      +.   -++..+++..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       156 ~~---~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       156 WI---VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HH---HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            11   12346677778999999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.01  E-value=1.6e-08  Score=91.11  Aligned_cols=138  Identities=18%  Similarity=0.232  Sum_probs=108.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc---hHHHHHHHHHHHHHHHHHHHhhcccc-----CCccCHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNP---HVYVTYRHIVAGIAMFPFAYFLERKI-----RPKLTLALFLEIFVL   84 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p---~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~   84 (350)
                      ..|.+++++++++|+...+..|...++ .++   ....++....+.+.+.......+...     ....+...+...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            469999999999999999999987554 332   33344444444443333322222211     123466778889999


Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      |+++.++++.+|+.++++.+++.++.+..++|++..++++++++|+++..      +++|.++++.|+.+...
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999      99999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.92  E-value=3.2e-08  Score=76.72  Aligned_cols=123  Identities=20%  Similarity=0.175  Sum_probs=92.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHH
Q 018804          185 KGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGL  264 (350)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~  264 (350)
                      .|.++.+.+.++-+...++.|+-.++.++ ...... .    + ......           .+   -...++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~-----------~~---p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF-----------GL---ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH-----------hc---cHHHHHHHHHHHHH
Confidence            47788899999999999999988877632 221111 0    0 000000           01   11245667888999


Q ss_pred             HHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHH--HhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          265 IVFIQLWCTDKRGPVFATMFNPVSTILVAILAYF--VFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       265 ~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~--~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ++.+|.+++++.+.+.+..+....++...+.++.  ++||++|+.+++|++++++|+++..++++|
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888875  899999999999999999999998765443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.92  E-value=1.6e-08  Score=91.35  Aligned_cols=139  Identities=14%  Similarity=0.193  Sum_probs=108.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHhhccccCCcc---------CH-HHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFN--HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKL---------TL-ALFL   79 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~--~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~   79 (350)
                      ...|.++++++++.|+...+..|...+  + .+|....++....+.+.+.|+....+.......         .. ..+.
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            356999999999999999999998776  4 899999999999999999998765432110000         00 0111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           80 EIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        80 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ..+..+..+....+.+++.+++++++..+++...+.|+++.++++++++|+++..      +++|.++++.|+.+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            1223333234444567778999999999999999999999999999999999999      99999999999999864

specificities overlap.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.89  E-value=4.2e-10  Score=93.71  Aligned_cols=278  Identities=14%  Similarity=0.189  Sum_probs=191.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL   93 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   93 (350)
                      ..++.+++-++.||..+.+....   |-.|.+-+... .++++++....++...   |..+.+.+...++.|++ ..+++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGt-T~GALifaiiv~~~~~---p~~T~~~~iv~~isG~~-Ws~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGT-TLGALIFAIIVFLFVS---PELTLTIFIVGFISGAF-WSFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhc-cHHHHHHHHHHheeec---CccchhhHHHHHHhhhH-hhhhh
Confidence            35678889999999998886654   67787776654 4444444444444323   46677888888899999 88899


Q ss_pred             HHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCCCcc
Q 018804           94 NMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHPPIH  172 (350)
Q Consensus        94 ~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  172 (350)
                      ..++.|+++.+++.+.++.. ++-+-+.+++.++++|=.+..+.  ....+++++.++|+.+-...+ +.          
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~-~~----------  140 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQD-RN----------  140 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeec-cc----------
Confidence            99999999999999998877 88888999999999997666500  001345666666766665421 11          


Q ss_pred             CcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHH
Q 018804          173 IQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLW  252 (350)
Q Consensus       173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  252 (350)
                       +.+++..++...|....+.+.+.|..|.+..+...  . |..+...-+.....+..+.+.....      +....+..+
T Consensus       141 -nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~~~------~~~~~K~t~  210 (288)
T COG4975         141 -NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFFKM------EKRFNKYTW  210 (288)
T ss_pred             -cccccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhccc------ccchHHHHH
Confidence             11114455667899999999999999999855443  2 3334333333333333333333211      111233334


Q ss_pred             HHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhh----hhhhHHHhhhheeee
Q 018804          253 STIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGS----IVGAVVVIGGLYLLL  323 (350)
Q Consensus       253 ~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~----~iG~~li~~g~~l~~  323 (350)
                      .-...|.. -+++..++..+.++.+..+.=.+.-+..+.+++-+.++++|+=|..+    ++|++++++|..+..
T Consensus       211 ~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         211 LNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            44445653 67788888999999998888888889999999999999999998766    468888888866554

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.85  E-value=1.6e-08  Score=77.19  Aligned_cols=108  Identities=15%  Similarity=0.250  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHH
Q 018804          220 WMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFV  299 (350)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~  299 (350)
                      ++...+.+.............+.+.....+.+...+..|.++...++.++.++.++.+ ..++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            3445555555555554322111222222345666666677666689999999999999 588899999999999999999


Q ss_pred             hccccchhhhhhhHHHhhhheeeeecccC
Q 018804          300 FGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       300 ~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ++|+++..+++|++++++|++++.+.+.+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.77  E-value=1.8e-07  Score=83.76  Aligned_cols=129  Identities=15%  Similarity=0.181  Sum_probs=105.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHH----HHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHI----VAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG   88 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (350)
                      .+|+++.+++.+.++.+....|..   +.+|...++.+..    .+.+++.++   +  +.++ .+.+..+..+..|++ 
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~-  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLM-  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHH-
Confidence            679999999999999999999976   3788888666655    444444333   1  1122 234445556668999 


Q ss_pred             HHHHHHHHHHhhh-ccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchh----hHHHHHHHHHHHHhh
Q 018804           89 VTLTLNMYFASLR-YTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKV----LGTLVSLAGVTIMTV  157 (350)
Q Consensus        89 ~~~~~~~~~~al~-~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~----~~~~l~~~Gv~l~~~  157 (350)
                      .++++.+|+.+.+ +.+++.+.++.+..|+...+.+++++||+.+++      ++    +|.++.+.|+.++..
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence            7999999999999 999999999999999999999999999999999      99    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.76  E-value=3.7e-07  Score=73.70  Aligned_cols=133  Identities=17%  Similarity=0.297  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhC------CCCchHHHHHHHHHHHHHHHHHHHhhccccCCc----c-------CHHH
Q 018804           15 PLLLMVLAQLSYTFLYFITEASFNH------GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPK----L-------TLAL   77 (350)
Q Consensus        15 g~~~~l~~~~~~~~~~~~~k~~~~~------g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   77 (350)
                      |.++++.+.++.+...+..|...++      ..++.++..+....+.+++.+.....++.+..+    .       +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678899999999999999987665      689999999999999999999887765543110    0       2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHH
Q 018804           78 FLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTI  154 (350)
Q Consensus        78 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l  154 (350)
                      +...+..|++ ..+.+...+..++++++...++......+.+.++++++++|+++..      ++.|++++++|+.+
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            5556667777 5678889999999999999999999999999999999999999999      99999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.72  E-value=6.8e-07  Score=79.92  Aligned_cols=135  Identities=17%  Similarity=0.252  Sum_probs=109.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHH-HHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVT-YRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVT   90 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (350)
                      ...|..+.+.+++.|+...+..|... + .++..... +..........+... ...+  .....+.+......|+++.+
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHH
Confidence            35899999999999999999999876 4 67766666 444422222222221 1111  35567788999999999887


Q ss_pred             HHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           91 LTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        91 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      +++.+++++++..+++.++.+..+.|++..++++++++|+++..      +++|..+.+.|+.+...
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~  287 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999      99999999999998864

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.71  E-value=1.5e-07  Score=81.09  Aligned_cols=140  Identities=10%  Similarity=0.148  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc-ccchhhHHHHHHHhHhHH
Q 018804          184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWR-IGLNIDLWSTIYGGVVVS  262 (350)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~gi~~~  262 (350)
                      ..|+++++.|-+.|+....+.|-+.+.  ++..+..++.+.+.+..+.......+...-+. ...++.+......+.. -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            579999999999999998886655444  77889999999888888877776654322222 2234456666666664 5


Q ss_pred             HHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          263 GLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      ...+..|.+|.++....++++-.+++|.+.+++|.++++|+++..|++.+++..+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999999999999999999999999999999988876554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.71  E-value=2.8e-08  Score=86.41  Aligned_cols=274  Identities=12%  Similarity=0.136  Sum_probs=165.4

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhcc-ccCCccCHHHHHHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLER-KIRPKLTLALFLEIFVLSLVGV   89 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   89 (350)
                      +...|..+++.+.++.|.+..+-|+...+ ...                  .-.+.+ ...+..  +  -..++.|.+..
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~------------------~~~ra~~gg~~yl--~--~~~Ww~G~ltm   74 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA------------------SGLRAGEGGYGYL--K--EPLWWAGMLTM   74 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh------------------hcccccCCCcchh--h--hHHHHHHHHHH
Confidence            45788999999999999999999988766 111                  001111 111122  1  13455666667


Q ss_pred             HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC
Q 018804           90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP  169 (350)
Q Consensus        90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  169 (350)
                      .++...-|.|+.+.|.+.++++.+++-++.++++..++||+++..      ..+|+.++++|-.++... +|......+ 
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t-  146 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIES-  146 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCccccccc-
Confidence            778888889999999999999999999999999999999999999      999999999999998764 332211100 


Q ss_pred             CccCcccchhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHhhhcC--chhHHHHHHHHHHHHHHH-------HHHHHHhcC
Q 018804          170 PIHIQRNNIIQEQWLKGSFLT-IASSITWSAMYIMQAITLKRYP--AQLSLTTWMCFLGAAQSA-------VFTVIVARK  239 (350)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~-l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-------~~~~~~~~~  239 (350)
                           ..+-.......+++.- ..-.....+-....   .+++.  +.+.+.....+.|.+..+       .+-.....+
T Consensus       147 -----~~el~~~~~~~~Fliy~~~iil~~~il~~~~---~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~  218 (335)
T KOG2922|consen  147 -----VEEVWELATEPGFLVYVIIIILIVLILIFFY---APRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN  218 (335)
T ss_pred             -----HHHHHHHhcCccHHHHHHHHHHHHHHHheee---cccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC
Confidence                 0000111111222211 11111111111121   22221  344444444333322111       111111111


Q ss_pred             CccccccchhhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--c----hhhhhhh
Q 018804          240 PADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKL--F----LGSIVGA  312 (350)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~--t----~~~~iG~  312 (350)
                       .+  ...+..|..++.+.. |........++|++..+++.++.+.| .-..++++.|.++|+|--  +    .....|+
T Consensus       219 -~q--l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf  294 (335)
T KOG2922|consen  219 -NQ--LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGF  294 (335)
T ss_pred             -cc--cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhH
Confidence             12  222345555555444 55666677789999999988876555 456777788889998854  2    2456789


Q ss_pred             HHHhhhheeeeeccc
Q 018804          313 VVVIGGLYLLLWGKE  327 (350)
Q Consensus       313 ~li~~g~~l~~~~~~  327 (350)
                      ..++.|++++...|.
T Consensus       295 ~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  295 VTIFLGIFLLHRTKD  309 (335)
T ss_pred             HHhhheeeEeeeecc
Confidence            999999999965443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.70  E-value=7e-07  Score=82.17  Aligned_cols=139  Identities=15%  Similarity=0.192  Sum_probs=102.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhC------CCCchHHHHHHHHHHHHHHHHHHHhhccccCC-----------ccC
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNH------GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-----------KLT   74 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~------g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----------~~~   74 (350)
                      ...|.++++++++.|+...+..|...++      ..++.....+....+.++++|+....+.....           ...
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            3569999999999999999999997764      14566677777888888888887543221100           001


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHH
Q 018804           75 LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTI  154 (350)
Q Consensus        75 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l  154 (350)
                      ..........+.+...+.+.+.+++++++++..+++...+.|+++.++++++++|+++..      +++|.++++.|+.+
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l  345 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL  345 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence            111111122222223344444446999999999999999999999999999999999999      99999999999987


Q ss_pred             Hh
Q 018804          155 MT  156 (350)
Q Consensus       155 ~~  156 (350)
                      ..
T Consensus       346 Ys  347 (350)
T PTZ00343        346 YS  347 (350)
T ss_pred             Hh
Confidence            64

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.64  E-value=1e-06  Score=66.71  Aligned_cols=70  Identities=17%  Similarity=0.213  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804           81 IFVLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      ....++++.++++.++..++++.|.+.+..+.++.++++.+++++++|||++..      +++|+.+++.|++++.
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            344455778889999999999999999999999999999999999999999999      9999999999999885

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.55  E-value=5.3e-07  Score=68.23  Aligned_cols=66  Identities=18%  Similarity=0.221  Sum_probs=61.0

Q ss_pred             hHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          258 GVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       258 gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      ++++.++++.++..++++.+.+.+-.+.++.++++.+.++++|||+++..+++|.+++++|++++.
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            345678899999999999999999999999999999999999999999999999999999987764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.52  E-value=2.8e-06  Score=71.57  Aligned_cols=139  Identities=14%  Similarity=0.110  Sum_probs=118.3

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHH
Q 018804            9 VYLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVG   88 (350)
Q Consensus         9 ~~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (350)
                      ..-+-.|..+++.+..+|+.+.+..|.+-+. .+.-.-+..-+.++.++.+|+..-.....  -.++......+..++++
T Consensus       143 ~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlS  219 (292)
T COG5006         143 WSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLS  219 (292)
T ss_pred             CcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHh
Confidence            3446789999999999999999999988654 56666677789999999999875432222  34666677888899999


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      ..+.+.+-..+++..|...-+++.++.|.+.++.++++++|+++..      ||.++...+.+..=.+
T Consensus       220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~  281 (292)
T COG5006         220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST  281 (292)
T ss_pred             cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999999      9999999988876443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.52  E-value=3.2e-06  Score=65.57  Aligned_cols=119  Identities=19%  Similarity=0.257  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTL   93 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   93 (350)
                      .++++++++.++-+..-++.|...++ .+....... . ...    ....            ......+..|+++.++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~----~~~~------------~~p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAA----LLAF------------GLALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHH----HHHH------------hccHHHHHHHHHHHHHHH
Confidence            46788888888889999999998876 544332221 0 000    0000            001235778888899999


Q ss_pred             HHHHHhhhccCcchhhhhhchhhHHHHHHHHH--HhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           94 NMYFASLRYTSPTFVASVVNTVAAVTFVIAVV--LRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        94 ~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~--~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      .++.+++++.|.+.+..+.+..++++.+.++.  ++||+++..      +++|+++.++|++++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999888888885  899999999      99999999999999863

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.49  E-value=4.4e-06  Score=75.38  Aligned_cols=141  Identities=15%  Similarity=0.077  Sum_probs=114.0

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCC--ccCHHHHHHHHHHHHH
Q 018804           10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP--KLTLALFLEIFVLSLV   87 (350)
Q Consensus        10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~   87 (350)
                      .+..+|-++++.++.++|..++..++..++ .++.++..+-.+.+.++..+.....++++..  +.+.+.....+..+++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence            467899999999999999999999998887 8999988888888888888877666665533  2344434333333333


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY  158 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  158 (350)
                       ....+.+.-..+++.+++...+-..++.++..++..+++|+++++.      .++|.+++++|.++....
T Consensus       243 -lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  243 -LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA  306 (334)
T ss_pred             -HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence             5556667778899999988888888899999999999999999999      999999999999988653

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.29  E-value=1.9e-07  Score=79.03  Aligned_cols=137  Identities=12%  Similarity=0.095  Sum_probs=102.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhH
Q 018804          182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVV  261 (350)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~  261 (350)
                      ..++|..+..++ ..+...++..++..+.  +|.......++.-.+...|..++..+..  +.....+.|  +++=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehhh-
Confidence            446888888888 8888888888888877  6677766666655555555554332211  111111222  2233443 


Q ss_pred             HHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          262 SGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       262 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      +..+..+.++++++.+.+.+.++...+|+++.++++++++|+.|....+|..+.+.|++++.+..
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            45677788999999999999999999999999999999999999999999999999999998654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.21  E-value=3.3e-05  Score=67.12  Aligned_cols=117  Identities=12%  Similarity=0.075  Sum_probs=92.1

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHH
Q 018804           10 YLRFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGV   89 (350)
Q Consensus        10 ~~~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (350)
                      .+..+++..++++.+.+..+..+.|+.   +.+|....+=+.+-..+--..+.... +   ++...|..++-++.|++ .
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~---~~~~~k~~~~nil~G~~-w  205 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-K---KPFFEKKSWKNILTGLI-W  205 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-c---ccccccchHHhhHHHHH-H
Confidence            345789999999999999999999985   47888777765544444433333322 1   13333456777888999 8


Q ss_pred             HHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccc
Q 018804           90 TLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLR  134 (350)
Q Consensus        90 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~  134 (350)
                      ..++.+++.|.+....+.+-.+.++..++..+-+.+++||+-+++
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            999999999999999999999999999999999999999998777

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.20  E-value=4.3e-05  Score=68.99  Aligned_cols=129  Identities=13%  Similarity=0.062  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHhhhcC-c--hhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHHh
Q 018804          196 TWSAMYIMQAITLKRYP-A--QLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLWC  272 (350)
Q Consensus       196 ~~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~a  272 (350)
                      ++..+.+.++++.++.. .  +..+++.++....+...+.......+  .   .....+......++ ...++..+-+.+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~~~~a   84 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILSF-LFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHHH-HHHHHHHHHHHH
Confidence            34456677888776643 4  77888888888777777666543311  1   12223444444454 477888899999


Q ss_pred             hccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804          273 TDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH  330 (350)
Q Consensus       273 ~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~  330 (350)
                      +++++.....+.....|+..+++++++++++.+..++.+++++.+|+++....+.+++
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            9999999999999999999999999999999999999999999999999987765544

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.12  E-value=1.1e-05  Score=61.33  Aligned_cols=69  Identities=19%  Similarity=0.342  Sum_probs=59.4

Q ss_pred             HhHHHHHHHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          259 VVVSGLIVFIQLWCTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      +++.++++.++..++|+.+.+.+=.+ .-+..+.+.+.++++|||++|+.+++|+.++++|++.+....+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            45677899999999999999765544 5688999999999999999999999999999999998865543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.10  E-value=2.8e-05  Score=69.62  Aligned_cols=121  Identities=21%  Similarity=0.255  Sum_probs=89.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhH
Q 018804          181 EQWLKGSFLTIASSITWSAMYIMQAITLKRYPA-QLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGV  259 (350)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi  259 (350)
                      .++..|..+++.++++.+....++|+...+.+. +....                   .  ...+......|+.-+    
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-------------------~--~~~~~l~~~~W~~G~----   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-------------------S--GGRSYLRRPLWWIGL----   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-------------------c--hhhHHHhhHHHHHHH----
Confidence            355899999999999999999999998777521 01000                   0  000000111233322    


Q ss_pred             hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      +...++..+...|+...+++.++.+..+..++..+++..+++|+++...+.|+.+++.|..+.....
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            2344566677889999999999999999999999999999999999999999999999987766443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.01  E-value=0.00022  Score=56.14  Aligned_cols=132  Identities=15%  Similarity=0.196  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI  265 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~  265 (350)
                      ..++++.++..-++......++.++..+|....+..+..+.+.......+.+..  ++.......|+..+ -|+ ....-
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence            357889999999999999999999885699999999999999998888876643  22222233455544 354 46667


Q ss_pred             HHHHHHhhccCCcchhh-hhhhHHHHHHHHHHHH----HhccccchhhhhhhHHHhhhhee
Q 018804          266 VFIQLWCTDKRGPVFAT-MFNPVSTILVAILAYF----VFGEKLFLGSIVGAVVVIGGLYL  321 (350)
Q Consensus       266 ~~~~~~a~~~~~~~~~~-~~~~~~pv~~~l~~~~----~~~e~~t~~~~iG~~li~~g~~l  321 (350)
                      ..+..+..++.++.... ....-+-+.+.++|.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77888999999997655 5556677788888876    23467899999999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.84  E-value=6.6e-05  Score=56.42  Aligned_cols=68  Identities=16%  Similarity=0.306  Sum_probs=58.2

Q ss_pred             HhHHHHHHHHHHHhhccCCcchhh-hhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          259 VVVSGLIVFIQLWCTDKRGPVFAT-MFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      +++.++++.++..++|+.+.+.+= .-.-+..+.+++.++++|||++++.+++|+.++++|++++...+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            446778999999999999987654 44667888899999999999999999999999999999986544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.79  E-value=0.024  Score=50.74  Aligned_cols=299  Identities=11%  Similarity=0.104  Sum_probs=177.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhc-cc----cCCccCHHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLE-RK----IRPKLTLALFLEIFVLSL   86 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~-~~----~~~~~~~~~~~~~~~~g~   86 (350)
                      -..|+++..+..+.-+..++-.|...+  . +++....-..+-.-+..|+..-.- -+    .....+...+....+.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVKG--W-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcCC--c-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            357888999999999999988887532  3 333333333333333344432211 11    112344556777888999


Q ss_pred             HHHHHHHHHHHHhhhccCcchhh-hhhchhhHHHHHHHHHHhccccc-cccccccchhhHHHHHHHHHHHHhhccCCCCC
Q 018804           87 VGVTLTLNMYFASLRYTSPTFVA-SVVNTVAAVTFVIAVVLRLETLD-LRNARGMAKVLGTLVSLAGVTIMTVYKGPAAR  164 (350)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~il~~~~~~e~~~-~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  164 (350)
                      + .+++...|=.+++|+..+... +...+..++..++-.++.++--. ..++-+...++|++++++|+.+..........
T Consensus        82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            9 889999999999999988775 44556666666665555432110 11122334799999999999999653211111


Q ss_pred             CCCCCCccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh------hhcC-chhHH----HHHHHHHHHHHHHHHH
Q 018804          165 NPGHPPIHIQRNNIIQEQWLKGSFLTIASSITWSAMYIMQAITL------KRYP-AQLSL----TTWMCFLGAAQSAVFT  233 (350)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~------~~~~-~~~~~----~~~~~~~~~i~~~~~~  233 (350)
                      .  .      +++..+.+..+|.++++++++..+..++-...-.      .... +|+..    ....+..+.+.-+...
T Consensus       161 ~--~------~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc  232 (344)
T PF06379_consen  161 E--L------GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC  232 (344)
T ss_pred             h--h------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence            0  0      1113346678999999999999988887643211      1111 22222    2233444555566655


Q ss_pred             HHHhc---CCc---cccc---cchhhHHHHHHHhHhHHHHHHHHHHHhhccCCc----chhhhhhhHHHHHHHHHHHHHh
Q 018804          234 VIVAR---KPA---DWRI---GLNIDLWSTIYGGVVVSGLIVFIQLWCTDKRGP----VFATMFNPVSTILVAILAYFVF  300 (350)
Q Consensus       234 ~~~~~---~~~---~~~~---~~~~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~pv~~~l~~~~~~  300 (350)
                      ++...   +..   +...   .........+..|++ =..++++|-.+-.+.+.    .--.+.+.+..+++-+++ +++
T Consensus       233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG-l~l  310 (344)
T PF06379_consen  233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG-LIL  310 (344)
T ss_pred             HHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH-HHH
Confidence            55322   211   1111   112345555555553 55667777777776664    445578888999999999 456


Q ss_pred             ccc------cchhhhhhhHHHhhhheeeee
Q 018804          301 GEK------LFLGSIVGAVVVIGGLYLLLW  324 (350)
Q Consensus       301 ~e~------~t~~~~iG~~li~~g~~l~~~  324 (350)
                      +|-      .-..-++|+++++.+++++-.
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            662      223446788888888766543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.76  E-value=0.00053  Score=51.34  Aligned_cols=64  Identities=16%  Similarity=0.185  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804           86 LVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM  155 (350)
Q Consensus        86 ~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~  155 (350)
                      ..++.+++++...++|+.|.+.+-.+ .....+.+.+++++++||++++.      +++++.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            33477789999999999999998654 45888999999999999999999      999999999999886

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.74  E-value=0.00017  Score=54.92  Aligned_cols=68  Identities=19%  Similarity=0.218  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHhhhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           84 LSLVGVTLTLNMYFASLRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        84 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ..+.++++++.++..++++.|.+.+-.+. .+.-+.+.+++.++++|+++..      +++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            44555888999999999999999997665 6999999999999999999999      99999999999988843

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.73  E-value=0.00081  Score=52.97  Aligned_cols=139  Identities=13%  Similarity=0.142  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHH
Q 018804          184 LKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSG  263 (350)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~  263 (350)
                      ....+.++.++.+-.+..-...++.+..++|.......+..|.+....+.++.+.. .++.......|+..+. |++ .+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~~G-G~l-Ga   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAWIG-GLL-GA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHHHc-cch-hh
Confidence            46678889999999999999989988886799999999999999888888874332 2333222334544442 443 32


Q ss_pred             HHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhc----cccchhhhhhhHHHhhhheeeeec
Q 018804          264 LIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFG----EKLFLGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       264 ~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~----e~~t~~~~iG~~li~~g~~l~~~~  325 (350)
                      +=.+.......+.+++ .......-+-+.+.+.|.+=+.    .+++..+++|++++++|+++..+.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            2233344556666664 5667777788888888877654    567999999999999996665543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.71  E-value=0.00024  Score=53.44  Aligned_cols=67  Identities=13%  Similarity=0.253  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      .+.++++++.++..++++.|.+.+-.+ ..+..+.+.+++++++||++++.      +++|+.+.++|++.+-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            455578888999999999999999766 55889999999999999999999      99999999999999853

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.66  E-value=0.00026  Score=52.14  Aligned_cols=66  Identities=26%  Similarity=0.260  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhh-hhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVA-SVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      .+++...++.++-.++|+.|.+.+- +-...-.+.+++.++++++|++++.      +++++.+.+.|++.+-
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            3444677899999999999999885 5555889999999999999999999      9999999999999884

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.62  E-value=0.00026  Score=61.51  Aligned_cols=80  Identities=9%  Similarity=0.148  Sum_probs=69.3

Q ss_pred             hhHHHHHHHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          249 IDLWSTIYGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       249 ~~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ++......-++ ..++...+.+.++++.+++...++..++.+++.++++++++++++..||++..+..+|+.+.......
T Consensus        15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34444444455 37788899999999999999999999999999999999999999999999999999999998876654


Q ss_pred             C
Q 018804          329 D  329 (350)
Q Consensus       329 ~  329 (350)
                      .
T Consensus        94 ~   94 (244)
T PF04142_consen   94 S   94 (244)
T ss_pred             c
Confidence            4

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.00026  Score=52.16  Aligned_cols=66  Identities=20%  Similarity=0.311  Sum_probs=58.0

Q ss_pred             hHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804          260 VVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~  325 (350)
                      ++..+++.+...++|+.+.. -.++-.-.-.+.+.+.++++|+|++++.+++|..++++|++.....
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            35678999999999999985 5677788888999999999999999999999999999999887654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.57  E-value=0.00052  Score=51.07  Aligned_cols=65  Identities=12%  Similarity=0.130  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHhhhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHh
Q 018804           86 LVGVTLTLNMYFASLRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMT  156 (350)
Q Consensus        86 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~  156 (350)
                      +.+++.++.+...++++.|.+.+-.+. ....+.+.+++++++||++++.      +++++.+.+.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            445788999999999999999986554 4899999999999999999999      9999999999999883

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.54  E-value=0.00021  Score=53.58  Aligned_cols=110  Identities=13%  Similarity=0.096  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018804           20 VLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFAS   99 (350)
Q Consensus        20 l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   99 (350)
                      ++..++||.++++.|...+. .++..-.. |..-....    .         -.+++...     .+.-+..+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~----L---------l~n~~y~i-----pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF----L---------LLNPKYII-----PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH----H---------HHhHHHHH-----HHHHHHHHHHHHHHH
Confidence            34578999999999998775 55443331 21111111    0         11222222     222256678888999


Q ss_pred             hhccCcchhhhhh-chhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804          100 LRYTSPTFVASVV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM  155 (350)
Q Consensus       100 l~~~~~~~~~~i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~  155 (350)
                      +...+.+.+.++. ++.=++|++.++++.+|..+++      .++|+++.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            9999999999885 7888999999998888888888      999999999998764

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.54  E-value=0.0015  Score=48.89  Aligned_cols=64  Identities=9%  Similarity=0.134  Sum_probs=55.8

Q ss_pred             hHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeee
Q 018804          260 VVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLL  323 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~  323 (350)
                      .+..+++.+...++|+.+.. ..++-.-+..+.+.+.++++|+|++++.+++|+.+++.|++...
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            45678999999999999986 45666778888999999999999999999999999999988763

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.53  E-value=0.0027  Score=49.99  Aligned_cols=130  Identities=15%  Similarity=0.167  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804           16 LLLMVLAQLSYTFLYFITEASFNHGMN-PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN   94 (350)
Q Consensus        16 ~~~~l~~~~~~~~~~~~~k~~~~~g~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   94 (350)
                      .++.+++...-+....++....+. .+ |+..++..+..+.+++..+....+++.....+...|+ ...-|++| +..-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence            456677777777788887777776 55 9999999999999999888877665433222222233 33367774 55777


Q ss_pred             HHHHhhhccCcchhhhhhc-hhhHHHHHHHHH----HhccccccccccccchhhHHHHHHHHHHH
Q 018804           95 MYFASLRYTSPTFVASVVN-TVAAVTFVIAVV----LRLETLDLRNARGMAKVLGTLVSLAGVTI  154 (350)
Q Consensus        95 ~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~----~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l  154 (350)
                      +..+..+..+++.+..+.- -+-+...++..+    .-|+++++.      +.+|+++.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            7788889999888876555 445555566664    366888888      99999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.50  E-value=0.00044  Score=51.44  Aligned_cols=66  Identities=12%  Similarity=0.188  Sum_probs=57.5

Q ss_pred             HhHHHHHHHHHHHhhccCCcc-hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeee
Q 018804          259 VVVSGLIVFIQLWCTDKRGPV-FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLW  324 (350)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~  324 (350)
                      +++..+++.+...++|+.+.. ..++-.-+..+.+.+.++++|+|++++.+++|+.++++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            345778999999999999986 456667788899999999999999999999999999999988753

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.49  E-value=0.001  Score=59.55  Aligned_cols=142  Identities=13%  Similarity=0.217  Sum_probs=114.9

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhC---CCCchHHHHHHHHHHHHHHHHHHHhhcc---ccCCccCHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNH---GMNPHVYVTYRHIVAGIAMFPFAYFLER---KIRPKLTLALFLEIFVL   84 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~---g~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   84 (350)
                      |...|-++.+++++++|.+.++.|.-.++   .++--.+.-+--++.+++++|..+.-+.   ....-++..+....+..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            45789999999999999999999986654   2455555555667777888876544332   22223445567778889


Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY  158 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  158 (350)
                      ++++.+++.++|..|.-.+++-.+++-..++....++.-.++.+..+++.      .++|.+.+++|-+++...
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheecc
Confidence            99999999999999999999999999999888888888998889999999      999999999999988653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.42  E-value=0.0092  Score=54.20  Aligned_cols=146  Identities=14%  Similarity=0.080  Sum_probs=95.6

Q ss_pred             hhchHHHHHHHHHHHHHHHHH-------HHHHHhhhCCCCchHHHHHHHH---HHHHHHHH-HHHh--hccccC-----C
Q 018804           10 YLRFKPLLLMVLAQLSYTFLY-------FITEASFNHGMNPHVYVTYRHI---VAGIAMFP-FAYF--LERKIR-----P   71 (350)
Q Consensus        10 ~~~~~g~~~~l~~~~~~~~~~-------~~~k~~~~~g~~p~~~~~~r~~---~~~l~l~~-~~~~--~~~~~~-----~   71 (350)
                      .+..||+..++++.+.++...       ...+.+.+.|.++.....-.+.   ++..+.-. +..+  +++++.     +
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            345799999999999999999       6666655556777766665555   44433322 2222  121111     1


Q ss_pred             ccC----HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhh---hh-chhhHHHHHHHHHHhccccccccccccchhh
Q 018804           72 KLT----LALFLEIFVLSLVGVTLTLNMYFASLRYTSPTFVAS---VV-NTVAAVTFVIAVVLRLETLDLRNARGMAKVL  143 (350)
Q Consensus        72 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~  143 (350)
                      ..+    .+......+.|++ ..+++.+|..+-...+.+.+.+   +. ++.-++..+-+. ++||+=+..+|..+.-++
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             cccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence            112    2233333677777 7889999999999887665555   55 444455555555 699998866666667799


Q ss_pred             HHHHHHHHHHHHhh
Q 018804          144 GTLVSLAGVTIMTV  157 (350)
Q Consensus       144 ~~~l~~~Gv~l~~~  157 (350)
                      |+++.++|..++..
T Consensus       328 G~vliI~g~~lig~  341 (345)
T PRK13499        328 GCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.32  E-value=0.00092  Score=59.84  Aligned_cols=138  Identities=14%  Similarity=0.224  Sum_probs=111.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhh---CCCCchHHHHHHHHHHHHHHH-HHHHhhccccC-----CccCHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFN---HGMNPHVYVTYRHIVAGIAMF-PFAYFLERKIR-----PKLTLALFLEIF   82 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~---~g~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~~   82 (350)
                      +..|...++.+.+..+.-.++.|..+.   +..+++....+..-.+...++ |+....+....     ...+.. .....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            568999999999999999999999883   358899998888888888888 87655433222     122333 33334


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ..+++ ..+.+...|..+..+++-.-++....--+++.+.++++++++.++.      +..|.+++++|+.+-..
T Consensus       240 ~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence            44466 5667788889999999999999999888888899999999999999      99999999999998864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.18  E-value=0.0013  Score=48.05  Aligned_cols=57  Identities=25%  Similarity=0.358  Sum_probs=35.5

Q ss_pred             HhHHHHHHHHHHHhhccCCcchh-hhhhhHHHHHHHHHHHHHhccccchhhhhhhHHH
Q 018804          259 VVVSGLIVFIQLWCTDKRGPVFA-TMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVV  315 (350)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li  315 (350)
                      +.+.++++.++..++|+.+.+.+ .+..-+..+...+.|.+++||++|+.+++|+.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33577889999999999999877 5556689999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.08  E-value=0.0083  Score=52.06  Aligned_cols=186  Identities=8%  Similarity=0.033  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHHHH
Q 018804           15 PLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLTLN   94 (350)
Q Consensus        15 g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   94 (350)
                      |++.++++++++|..++-.|.. +. .|++.+-++.+....+.-+......+.   ++    -....++.|.+ .+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~----f~p~amlgG~l-W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---PP----FYPWAMLGGAL-WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---Cc----ceeHHHhhhhh-hhcCce
Confidence            5678899999999999999974 44 577777666666555554444443222   21    24556677777 788999


Q ss_pred             HHHHhhhccCcchhhhhhchhhHHHHHH-HHH-HhccccccccccccchhhHHHHHHHHHHHHhhccCCCCCCCCCC---
Q 018804           95 MYFASLRYTSPTFVASVVNTVAAVTFVI-AVV-LRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKGPAARNPGHP---  169 (350)
Q Consensus        95 ~~~~al~~~~~~~~~~i~~~~pi~~~il-~~~-~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~---  169 (350)
                      +-...++..+.+....+.++.-+.+.-. +.+ +++++.... +.....++|++++++|..+...-+.+........   
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            9999999999999999988766555443 332 344433322 2234478999999999888865443331110000   


Q ss_pred             --Ccc----C-cc-----cch------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018804          170 --PIH----I-QR-----NNI------IQEQWLKGSFLTIASSITWSAMYIMQAITLKRY  211 (350)
Q Consensus       170 --~~~----~-~~-----~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~  211 (350)
                        +.+    . ++     +++      ...+...|..+++++++.|+...+=.....++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence              000    0 00     001      112467899999999999998877666555543

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.01  E-value=0.0071  Score=44.11  Aligned_cols=58  Identities=21%  Similarity=0.194  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHH
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVS  148 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~  148 (350)
                      .+.+++++..++..++++.|.+.+-.+ ..+..+.+.+++.+++||++|..      |+.|+.+.
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence            344578899999999999999999655 56999999999999999999999      99998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.87  E-value=0.011  Score=44.49  Aligned_cols=109  Identities=8%  Similarity=0.074  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHHHHHHHH
Q 018804          192 ASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLIVFIQLW  271 (350)
Q Consensus       192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~~~~~~~  271 (350)
                      +.++.|+..+-+.|+..+..+ +..-.. +..-....     ++          ..++.+..+     .....+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll----------~n~~y~ipf-----~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LL----------LNPKYIIPF-----LLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HH----------HhHHHHHHH-----HHHHHHHHHHHH
Confidence            456889999999999887763 222111 21111111     10          011122222     234456668899


Q ss_pred             hhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheee
Q 018804          272 CTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLL  322 (350)
Q Consensus       272 a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~  322 (350)
                      .+.+.+.+.+..+ +.+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999999988877 59999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.69  E-value=0.0037  Score=54.19  Aligned_cols=131  Identities=13%  Similarity=0.112  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI  265 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~  265 (350)
                      |.+..+.|+++++-..+=.|+....  |++....+++....+......++.+..  .  ..    .+.++ .|. .-+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~--f~----p~aml-gG~-lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--P--FY----PWAML-GGA-LWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--c--ce----eHHHh-hhh-hhhcC
Confidence            5667888999999888886655533  788888888777777776666543321  1  00    11111 122 23445


Q ss_pred             HHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHH-Hhcccc-----chhhhhhhHHHhhhheeeeecccC
Q 018804          266 VFIQLWCTDKRGPVFATMF-NPVSTILVAILAYF-VFGEKL-----FLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~-~~~e~~-----t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      ..+-.-.+|.++....-.+ ...+.+.+-..+.+ +||+++     ....++|++++++|..++..-|.+
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            5555566666666544433 34466677776665 565543     367789999999998887765443

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.66  E-value=0.0019  Score=56.91  Aligned_cols=127  Identities=21%  Similarity=0.227  Sum_probs=94.5

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhH
Q 018804          180 QEQWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGV  259 (350)
Q Consensus       180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi  259 (350)
                      ..++..|..+++.+.+..+...+..|+..++. ..   ..                ......+........|    +.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~-~~---~~----------------~ra~~gg~~yl~~~~W----w~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRA-GA---SG----------------LRAGEGGYGYLKEPLW----WAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHH-hh---hc----------------ccccCCCcchhhhHHH----HHHH
Confidence            34557899999999999999999988888775 11   00                0111111111111122    2345


Q ss_pred             hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccCCc
Q 018804          260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEGDH  330 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~~~  330 (350)
                      +...++-...+.|....+++.++.+..++.+.+.+++..+++|+++....+|+++.++|...+..+..+++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            56677888888888899999999999999999999999999999999999999999999777776655544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.64  E-value=0.0021  Score=54.34  Aligned_cols=135  Identities=11%  Similarity=0.101  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHhHHHHH
Q 018804          186 GSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVVVSGLI  265 (350)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~~  265 (350)
                      ..+.+++=++.|+..-....|.   ..+|...+.-+.+.+.++.+...++..+..      ....+..-...|++ =.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~~------T~~~~iv~~isG~~-Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPEL------TLTIFIVGFISGAF-WSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCcc------chhhHHHHHHhhhH-hhhh
Confidence            4677888889999877764322   226666666666666666666665432111      12234444555554 5678


Q ss_pred             HHHHHHhhccCCcchhhhhhh-HHHHHHHHHHHHHhccccchhhh----hhhHHHhhhheeeeecccCCc
Q 018804          266 VFIQLWCTDKRGPVFATMFNP-VSTILVAILAYFVFGEKLFLGSI----VGAVVVIGGLYLLLWGKEGDH  330 (350)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~~~~-~~pv~~~l~~~~~~~e~~t~~~~----iG~~li~~g~~l~~~~~~~~~  330 (350)
                      +..++++.+..+.+++..+.. .+-+-+.+++.++|||..++.++    +..++++.|+++-.++++.++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk  142 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK  142 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence            999999999999999887654 66777889999999999987765    356778889999887765433

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.33  E-value=0.15  Score=45.84  Aligned_cols=141  Identities=9%  Similarity=0.021  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcC---chhHHHHHHHHHHHHHHHHHHHHHh-----cCCcc---ccccchhhHHHHH
Q 018804          187 SFLTIASSITWSAMYIMQAITLKRYP---AQLSLTTWMCFLGAAQSAVFTVIVA-----RKPAD---WRIGLNIDLWSTI  255 (350)
Q Consensus       187 ~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~l  255 (350)
                      ....+...+.++......|...++.+   .|.+..+..-+.-.+++....+..+     .....   +....+.+..-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            34445555566666666666655432   3445555554555555555554432     11111   1111221222222


Q ss_pred             HHhHhHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          256 YGGVVVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       256 ~~gi~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      .-+. ..++.+.+++.+..+.++++..+..-+....+.+++.++++++++..||...++...|+.++.....+
T Consensus        97 vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   97 VPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            2222 36667779999999999999999999999999999999999999999999999999999999854443

>TIGR00803 nst UDP-galactose transporter

Probab=96.29  E-value=0.018  Score=49.42  Aligned_cols=59  Identities=14%  Similarity=0.004  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHH
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVT  153 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~  153 (350)
                      ...+..+..+.++|.++...++...+.++++.+++.++++|+++..      +++|+.+.+.|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence            5557778889999999999999999999999999999999999999      9999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=96.29  E-value=0.0063  Score=49.69  Aligned_cols=65  Identities=22%  Similarity=0.347  Sum_probs=60.1

Q ss_pred             HHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          264 LIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                      .+.+.|..++++++++.++.+...+..+..+++++++++++...+++..++.+.|+++..+.+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            35668999999999999999999999999999999999999999999999999999999876543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.15  E-value=0.12  Score=40.82  Aligned_cols=136  Identities=15%  Similarity=0.113  Sum_probs=81.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNHGMNPHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTLT   92 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   92 (350)
                      ...++..+.+..+-.....++....+..-+|+.-.+.-+..+.+++..+.+.++++.......+..++.+.-|++|.. .
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~-~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAI-F   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhh-h
Confidence            345666777777777777777766666345999999999999999888887744433322223333444444555322 3


Q ss_pred             HHHHHHhhhccCcchh-hhhhchhhHHHHHHHHHH----hccccccccccccchhhHHHHHHHHHHHH
Q 018804           93 LNMYFASLRYTSPTFV-ASVVNTVAAVTFVIAVVL----RLETLDLRNARGMAKVLGTLVSLAGVTIM  155 (350)
Q Consensus        93 ~~~~~~al~~~~~~~~-~~i~~~~pi~~~il~~~~----~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~  155 (350)
                      -..-........++.. .....-+-+...++..+=    -+++++..      +++|+++.++|+.++
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~  144 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA  144 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence            3233334444444433 344445555555554421    23556666      999999999995554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.67  E-value=0.17  Score=44.55  Aligned_cols=139  Identities=13%  Similarity=0.149  Sum_probs=109.2

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhccccCC-----ccCHHHHHHHHHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKIRP-----KLTLALFLEIFVL   84 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~   84 (350)
                      +...|+.++....++=|..+...+...+. +++++.+.+.-.+...+.-.......+. .++     +..+..++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence            56788888888888878888777766663 7899999999999988887776543222 111     2334556667788


Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      +.+ ..+++.+-++-++.-++-.-+.+.-+=-++..+++.++++.+++..      ||+|+.+.+.|..+=..
T Consensus       248 s~~-gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STC-GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHh-hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence            888 4668888888898888877778888888999999999999999999      99999999999887654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.27  E-value=0.23  Score=42.06  Aligned_cols=138  Identities=17%  Similarity=0.121  Sum_probs=96.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc-C---CccCHHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI-R---PKLTLALFLEIFVLSLV   87 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~   87 (350)
                      ..|-++++++..+=|...........+ .-+.-.+.+...+-+.+.+..-+...+.-. .   ...-+..++.+...+++
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~  250 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA  250 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence            456777777777777777766544332 122334444455555555433222211100 0   01123346677778888


Q ss_pred             HHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           88 GVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                       .++++++.+.-..+-+|-..+++..+--.|+.+++.++++.+++.+      ||+|.++.+.|...-..
T Consensus       251 -s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  251 -SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVV  313 (337)
T ss_pred             -HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhh
Confidence             6889999999999999999999999999999999999999999999      99999999999877654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.17  E-value=0.29  Score=43.45  Aligned_cols=139  Identities=12%  Similarity=0.157  Sum_probs=106.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc-----CC-ccCHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI-----RP-KLTLALFLEIFVL   84 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~-~~~~~~~~~~~~~   84 (350)
                      +..|+.++...++.-+...+..|...+. +.+-+.+.++..+.+.+.+....+..+...     .. ..+...+-.+...
T Consensus       155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS  234 (314)
T KOG1444|consen  155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS  234 (314)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence            3468999999999999999999987764 578889999999999999888775544311     11 1123335567778


Q ss_pred             HHHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           85 SLVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        85 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      +++|++ -.++-+++.+..++...++.....-..+.+...++.+++.++.      ..+|+.++++|.++-..
T Consensus       235 cv~gf~-isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  235 CVMGFG-ISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHH-HHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence            888766 4557778999998888888886666667777777788999999      99999999999988764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.58  E-value=0.25  Score=41.53  Aligned_cols=137  Identities=15%  Similarity=0.157  Sum_probs=104.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHhhccccC----CccCHHHHHHHHHHHHHH
Q 018804           14 KPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR----PKLTLALFLEIFVLSLVG   88 (350)
Q Consensus        14 ~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   88 (350)
                      .|++.+...++.-+..-...|.-.+ .+..-+...++..+++.++++.+....+....    ...+.......++.|++ 
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-  233 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-  233 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-
Confidence            4566666667666666666665444 24778899999999999999988876543221    12334445567778888 


Q ss_pred             HHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           89 VTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      .+...++--+..+-++.+..++...+.-.-.++-+.++++|+.+..      .+.++.++++..++-..
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav  296 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV  296 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence            4556678888999999999999999998888899999999999999      99999999988777654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.45  E-value=0.27  Score=44.22  Aligned_cols=141  Identities=9%  Similarity=-0.013  Sum_probs=83.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHH--hcCCc-cccccchhhHHHHHHHh
Q 018804          182 QWLKGSFLTIASSITWSAMYIMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIV--ARKPA-DWRIGLNIDLWSTIYGG  258 (350)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~g  258 (350)
                      +-..|+++..+++++.+.+.+-.||..+=.-+.....  +.+++ -+..|.....  .++.. -....+...+......|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv--~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV--QGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH--HHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            3478999999999999999998776543211222222  22222 1222222211  11111 11122233455555556


Q ss_pred             HhHHHHHHHHHHHhhccCCcch-hhhhhhHHHHHHHHHHHHHhcc-------ccchhhhhhhHHHhhhheeeeecc
Q 018804          259 VVVSGLIVFIQLWCTDKRGPVF-ATMFNPVSTILVAILAYFVFGE-------KLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       259 i~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~l~~~~~~~e-------~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      ++ =.++-..|-.++|+++.+. .++..-+..+++.++--++.|+       +-....++|+++.++|+.+..+.-
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            64 5667778889999999864 4455666677777776555442       123467889999999999887643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=93.37  E-value=1.3  Score=32.43  Aligned_cols=110  Identities=16%  Similarity=0.176  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCCC------chHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHHHHHHH
Q 018804           18 LMVLAQLSYTFLYFITEASFNHGMN------PHVYVTYRHIVAGIAMFPFAYFLERKIRPKLTLALFLEIFVLSLVGVTL   91 (350)
Q Consensus        18 ~~l~~~~~~~~~~~~~k~~~~~g~~------p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (350)
                      -++...++||..+.+.|..... .+      .-...+.|-....                ..+++++.. +.+    +-.
T Consensus         7 ~lvaVgllWG~Tnplirrgs~g-~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iP-Fll----Nqc   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSLG-WDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIP-FLL----NQC   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHhh-HhhccCchHHHHHHHHHHHHH----------------HHhHHHHHH-HHH----HHh
Confidence            4567788999999999987652 22      1222222221111                112222222 222    333


Q ss_pred             HHHHHHHhhhccCcchhhhhhc-hhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Q 018804           92 TLNMYFASLRYTSPTFVASVVN-TVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIM  155 (350)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~i~~-~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~  155 (350)
                      +..+||.-+++.+.+.+..+.+ +.-.|+.+.+..+-.|....+      .+.|..+...|..+.
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC  123 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence            6778889999999999886665 677888888877655555555      889999999998775

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=91.16  E-value=0.17  Score=43.40  Aligned_cols=139  Identities=14%  Similarity=0.075  Sum_probs=98.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhh-cCchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccchhhHHHHHHHhHh
Q 018804          182 QWLKGSFLTIASSITWSAMYIMQAITLKR-YPAQLSLTTWMCFLGAAQSAVFTVIVARKPADWRIGLNIDLWSTIYGGVV  260 (350)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gi~  260 (350)
                      +.++|..++-.-+++-......+..+.++ ...|...++.....-.++-.+..++....   .    ...|...+.++.+
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~----~~~~~hYilla~~   87 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---I----KAKWRHYILLAFV   87 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---H----HHHHHHhhheeEE
Confidence            34566666644444444444444555555 33677777777766667777776654311   1    1123444555553


Q ss_pred             HHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecccC
Q 018804          261 VSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKEG  328 (350)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~~  328 (350)
                       ..=++++...|.++++.+.+.++---..+...+++|++++.+-.+.++.|+++-++|++++...+-.
T Consensus        88 -DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   88 -DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             -eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence             6667777889999999999999999999999999999999999999999999999999998866543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.88  E-value=0.48  Score=41.30  Aligned_cols=66  Identities=11%  Similarity=0.018  Sum_probs=60.8

Q ss_pred             hHHHHHHHHHHHhhccCCcchhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeec
Q 018804          260 VVSGLIVFIQLWCTDKRGPVFATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWG  325 (350)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~  325 (350)
                      +|...+-.+.+.++..++++...++.-...+|+-+++.-+++..++..||+|+..+.+|++.+-..
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            467778888999999999999999999999999999999999999999999999999998887644

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.61  E-value=3.2  Score=36.84  Aligned_cols=125  Identities=13%  Similarity=0.084  Sum_probs=85.3

Q ss_pred             HHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccccchh-hHHHHHHHhHhHHHHHHHHHHHhhccCCcc
Q 018804          202 IMQAITLKRYPAQLSLTTWMCFLGAAQSAVFTVIVAR-KPADWRIGLNI-DLWSTIYGGVVVSGLIVFIQLWCTDKRGPV  279 (350)
Q Consensus       202 v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~gi~~~~~~~~~~~~a~~~~~~~  279 (350)
                      .+.++..++.+=|+..+.++...-.......-...+. .++.....+.. ..-.+.-.|+ +++.=..+=+++++++..+
T Consensus        33 f~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlS  111 (349)
T KOG1443|consen   33 FYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLS  111 (349)
T ss_pred             HHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeee
Confidence            3445555555557777777766554444444333332 11111111111 2222233343 5777778889999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      ..++.-...++|..++|.++-=|++++.-..=..++-+|+++..+++.
T Consensus       112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT  159 (349)
T KOG1443|consen  112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST  159 (349)
T ss_pred             eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence            999999999999999999988899999998888999999999887653

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.96  E-value=0.39  Score=41.71  Aligned_cols=142  Identities=20%  Similarity=0.173  Sum_probs=101.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHhhcccc----CCcc-CHHHHHHHHHHH
Q 018804           12 RFKPLLLMVLAQLSYTFLYFITEASFNH-GMNPHVYVTYRHIVAGIAMFPFAYFLERKI----RPKL-TLALFLEIFVLS   85 (350)
Q Consensus        12 ~~~g~~~~l~~~~~~~~~~~~~k~~~~~-g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~~-~~~~~~~~~~~g   85 (350)
                      ...|.++.+.+.+.-+...+..|..... |---+.++++..+.+.++++|.+.+.+.-+    .++. ..+-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            4689999999999999999999976554 223577889999999999999987754321    1233 566777788889


Q ss_pred             HHHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhccC
Q 018804           86 LVGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYKG  160 (350)
Q Consensus        86 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~  160 (350)
                      ++|+.+++.. .+=++.++|-.--+-..--...-.+++..+++|..+..      .|-+-++.+.|-..-+..+.
T Consensus       263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence            9987766533 23455555543333333334445577888999999998      99999999999888776543

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=86.82  E-value=11  Score=33.16  Aligned_cols=137  Identities=15%  Similarity=0.170  Sum_probs=88.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHh-------hcccc---CCcc---CHH
Q 018804           11 LRFKPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYF-------LERKI---RPKL---TLA   76 (350)
Q Consensus        11 ~~~~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~-------~~~~~---~~~~---~~~   76 (350)
                      .-..|+.++.++.+.-+.+.+.....-+ +|-++-+..|+....+.+.++...--       ..+.+   .+..   -+.
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~  240 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPS  240 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccH
Confidence            3457888888888888888887775444 48999999999999999887654210       00000   0111   112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhc----cCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHH
Q 018804           77 LFLEIFVLSLVGVTLTLNMYFASLRY----TSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGV  152 (350)
Q Consensus        77 ~~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv  152 (350)
                      .|..++.     +++.+++=..+...    +++-.+++...+=-.+..+++.+.++.++++.      .|+|..+.++|.
T Consensus       241 ~~~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt  309 (330)
T KOG1583|consen  241 MWVYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGT  309 (330)
T ss_pred             HHHHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHH
Confidence            2333332     23333222222222    23334556666777888899999999999999      999999999999


Q ss_pred             HHHhhc
Q 018804          153 TIMTVY  158 (350)
Q Consensus       153 ~l~~~~  158 (350)
                      .+....
T Consensus       310 ~~fa~~  315 (330)
T KOG1583|consen  310 LLFANV  315 (330)
T ss_pred             HHHHHH
Confidence            988753

>PRK02237 hypothetical protein; Provisional

Probab=86.24  E-value=4  Score=30.20  Aligned_cols=47  Identities=13%  Similarity=0.188  Sum_probs=40.5

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      ..+...-...+.++++.+.+-+++|+...++|..+.++|+.++....
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            45677778888999999999999999999999999999987776554

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.24  E-value=6.9  Score=34.21  Aligned_cols=140  Identities=16%  Similarity=0.193  Sum_probs=94.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHhhccccC-----CccCHHHHHHHHHHHH
Q 018804           13 FKPLLLMVLAQLSYTFLYFITEASFN-HGMNPHVYVTYRHIVAGIAMFPFAYFLERKIR-----PKLTLALFLEIFVLSL   86 (350)
Q Consensus        13 ~~g~~~~l~~~~~~~~~~~~~k~~~~-~g~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~   86 (350)
                      ..|+.++-.+.+.=+...-+...+.. ++-+..+++++...++.++++..+.....-..     .+.+++.....++.+.
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            45555555554444444444443333 34667889999999999998887765433111     2345556666666666


Q ss_pred             HHHHHHHHHHHHhhhccCcchhhhhhchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhcc
Q 018804           87 VGVTLTLNMYFASLRYTSPTFVASVVNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVYK  159 (350)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~  159 (350)
                      .| .++..+...=++.-++..++.+...--..+.+++++++.++++..      ..-+..+.+.|+.+=..++
T Consensus       269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence            64 335544444555567777777777778899999999999999998      8888999999998876543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.31  E-value=2.1  Score=31.53  Aligned_cols=48  Identities=15%  Similarity=0.256  Sum_probs=40.4

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeeccc
Q 018804          280 FATMFNPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGKE  327 (350)
Q Consensus       280 ~~~~~~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~~  327 (350)
                      ..+...-...+.+.++++.+-+++|+...++|..+.++|+.++....|
T Consensus        59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            445666677888899999999999999999999999999888776543

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	350
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 30/150 (20%)

Query: 5   SLHNVYLRFKPLLLMVLAQLSYTFL--YFITEASFNHGMNP-------HVYVTYRHIVAG 55
           S+ ++YL  K + L     L  + +  Y I +   +  + P       + ++ + H+   
Sbjct: 427 SIPSIYLELK-VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-HLKNI 484

Query: 56  -----IAMFPFAY----FLERKIRPKLTLALFLEIFVLSLVGVTLTLNMYFASLRYTSPT 106
                + +F   +    FLE+KIR   + A      +L+ +     L  Y   +    P 
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIR-HDSTAWNASGSILNTL---QQLKFYKPYICDNDPK 540

Query: 107 FVASVVNTVAAVTFVI---AVVLRLETLDL 133
           +   +VN +  + F+      ++  +  DL
Sbjct: 541 Y-ERLVNAI--LDFLPKIEENLICSKYTDL 567

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.06
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.7
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.7
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.62

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.06  E-value=1.2e-10  Score=90.22  Aligned_cols=70  Identities=17%  Similarity=0.301  Sum_probs=53.9

Q ss_pred             HhHhHHHHHHHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          257 GGVVVSGLIVFIQLWCTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       257 ~gi~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      .+++++++++.++++++++.+++.+..+ ..+.|+++++++++++||++++.+++|++++++|+++....+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5667899999999999999999999988 899999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.70  E-value=3e-08  Score=74.01  Aligned_cols=70  Identities=17%  Similarity=0.301  Sum_probs=64.1

Q ss_pred             HhHhHHHHHHHHHHHhhccCCcchhhhh-hhHHHHHHHHHHHHHhccccchhhhhhhHHHhhhheeeeecc
Q 018804          257 GGVVVSGLIVFIQLWCTDKRGPVFATMF-NPVSTILVAILAYFVFGEKLFLGSIVGAVVVIGGLYLLLWGK  326 (350)
Q Consensus       257 ~gi~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~l~~~~~~~e~~t~~~~iG~~li~~g~~l~~~~~  326 (350)
                      .++++.++++.++.+++|+.+.+.+-.+ ..+.|+++.+++++++||++|+.+++|+.++++|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556788999999999999999999888 899999999999999999999999999999999999886543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.70  E-value=2.8e-07  Score=68.65  Aligned_cols=69  Identities=16%  Similarity=0.245  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhh
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTV  157 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  157 (350)
                      ..++++.++++.++..++++.|.+.+..+ ..+.|+++.+++++++||++++.      +++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            46666688899999999999999999888 79999999999999999999999      99999999999999864

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.62  E-value=8.4e-08  Score=74.11  Aligned_cols=70  Identities=16%  Similarity=0.242  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcchhhhh-hchhhHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHhhc
Q 018804           83 VLSLVGVTLTLNMYFASLRYTSPTFVASV-VNTVAAVTFVIAVVLRLETLDLRNARGMAKVLGTLVSLAGVTIMTVY  158 (350)
Q Consensus        83 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~il~~~~~~e~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  158 (350)
                      +.++++.++++.++.+++++.|++.+..+ ..+.|+++.++++++++|++++.      +++|++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcC
Confidence            56677789999999999999999999988 89999999999999999999999      999999999999999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00