Citrus Sinensis ID: 018810

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccHHHHHHHHccccccEEEEEEccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccEEEEEcccEEEEEccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccHHHHHHHHHccccccEEEEEEccccccccccccccccEcccccccccEEEcccccHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccHHHHccccEEEEEEHHHHHHHHHcHcHHHHHHHHcccccccccccccccccHHccccccccccccccEEEEEccccccccccEEEEEEcccccccccccccccccccccccccHHHHHHHHccccEEEEccccccEcccccccccHEHHHHHccHHHHHHHHHHHccccccccHHHHccccc
Coil and Loop (DISEMBL)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTrimslrprfvqkpkIAFLFIARNRLPLEMVWDkffkgeesrfsiyvhsrpgflfskgttrSIYFLDRQvndsiqvdwggaSMIEAERILLRHAladpfndrfvflsdsfadtkegrynpkmapvipvhnwrkgsqwAVLTRKHAEIVVndttvfpmfqqhckrkslpefwrehsfpadpskehncipdehYVQTLLAQeglegeltrrsltysswdlssskdherrgwhpatykyadatpLLIQSIKEIDNIYyetehrrewcsdkgkpsscflfaRKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Flexible Loop (DISEMBL)
mkrkvvyqqqqkfnykwkRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSfadtkegrynpkmapvipvhnwRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTysswdlssskdherrgwhpatykyadatplLIQSIKEIDNIYYETEHrrewcsdkgkpSSCFLFARKFTRPAALRLLTmsvlgansneaireskhak
Low Complexity Region (SEG)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRsltysswdlsssKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Disordered region (IsUnstruct)
*****VYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREH**********NCIPDEHYVQTLLAQEGLEGELTRRSLTYSSW**********RGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLG**************
Disordered Region (DISOPRED)
*************NYKWKRKVFAAILLGFCFGSLVLMQCQY***************IAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVND****DWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSK****RGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSN**********
Disordered Region (DISEMBL)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWD*********RGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNE*********
Disordered Region (DISPRO)
**RKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLS********GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANS***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
225452380	367	PREDICTED: uncharacterized protein LOC10	0.957	0.912	0.730	1e-154
449450078	366	PREDICTED: uncharacterized protein LOC10	0.954	0.912	0.713	1e-148
356511696	364	PREDICTED: uncharacterized protein LOC10	0.942	0.906	0.685	1e-146
297811585	369	hypothetical protein ARALYDRAFT_909422 [	0.948	0.899	0.684	1e-144
224060092	358	predicted protein [Populus trichocarpa]	0.825	0.807	0.786	1e-144
356573337	365	PREDICTED: uncharacterized protein LOC10	0.945	0.906	0.677	1e-143
42567851	377	Core-2/I-branching beta-1,6-N-acetylgluc	0.948	0.880	0.663	1e-142
51968788	377	putative protein [Arabidopsis thaliana]	0.948	0.880	0.660	1e-141
296087625	324	unnamed protein product [Vitis vinifera]	0.834	0.901	0.753	1e-139
357520047	363	BC10 protein [Medicago truncatula] gi|35	0.9	0.867	0.693	1e-137

>gi|225452380|ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259507 [Vitis vinifera]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/363 (73%), Positives = 299/363 (82%), Gaps = 28/363 (7%)

Query: 8   QQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFVQKPKIAFLFIAR 64
           +++QK  YKWKR +FA +LLGFCFGSLVL+Q QY+RI    S+   F+Q+PKIAFLFIAR
Sbjct: 2   KRKQKSQYKWKRNLFAMLLLGFCFGSLVLLQTQYSRIRMFASMPSPFLQRPKIAFLFIAR 61

Query: 65  NRLPLEMVWDKFFKGE-ESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGAS 123
           NRLPL++VWD FF+ E E++FSI+VHSRPGFL +K TTRS+YFL+RQ+NDSIQVDWG AS
Sbjct: 62  NRLPLDVVWDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNRQLNDSIQVDWGEAS 121

Query: 124 MIEAERILLRHALADPFNDRFVFLSDS------------------------FADTKEGRY 159
           MI+AERILLR AL DP N+RFVFLSDS                        FADTKEGRY
Sbjct: 122 MIQAERILLRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTSTSFVDSFADTKEGRY 181

Query: 160 NPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPA 219
           NPKM PVIPVHNWRKGSQW VLTRKHA+IVV D TVFPMFQQHCKRKSLPEFWR+H  PA
Sbjct: 182 NPKMDPVIPVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKRKSLPEFWRDHPLPA 241

Query: 220 DPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYAD 279
           D SKEHNCIPDEHYVQTLLAQEG E E+TRRSLT+SSWDLSSSKD ER+GWHP TYK++D
Sbjct: 242 DASKEHNCIPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDRERKGWHPLTYKFSD 301

Query: 280 ATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANS 339
           ATP+LIQSIK+IDNIYYETE+RREWC+ KGKP+ CFLFARKFTRPAALRLL MS LGA  
Sbjct: 302 ATPMLIQSIKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPAALRLLNMSALGAFH 361

Query: 340 NEA 342
            E 
Sbjct: 362 GET 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450078|ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222566 [Cucumis sativus] gi|449483780|ref|XP_004156689.1| PREDICTED: uncharacterized LOC101222566 [Cucumis sativus]

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 289/366 (78%), Gaps = 32/366 (8%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIM-----SLRPRFVQKP 55
           MK+KV    Q+K  +KW+RK+   +L  FCFGSLV+MQ +Y R+M      L P+    P
Sbjct: 1   MKQKVA---QRKALFKWRRKLAFVLLFVFCFGSLVMMQSRYGRVMMLASLHLHPQSAHGP 57

Query: 56  KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
           K+AFLFIARNRLPL++VWD FF+  E++FSI+VHSRPGFLF+K TTRS YFL+RQVNDSI
Sbjct: 58  KVAFLFIARNRLPLDIVWDVFFQEGENKFSIFVHSRPGFLFNKATTRSTYFLNRQVNDSI 117

Query: 116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------------------F 151
           QVDWG ASMIEAERILLRHAL D  N RFVFLSDS                        F
Sbjct: 118 QVDWGEASMIEAERILLRHALTDSSNQRFVFLSDSCVPLYNFSYTYDYVMSTSTSFVDSF 177

Query: 152 ADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEF 211
           ADTKEGRYNPKM PVIPV NWRKGSQW VLTRKHA++VV D TVFPMFQQHCKRKSLPEF
Sbjct: 178 ADTKEGRYNPKMDPVIPVQNWRKGSQWVVLTRKHAKVVVKDITVFPMFQQHCKRKSLPEF 237

Query: 212 WREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWH 271
           WR+  FP DPSKEHNCIPDEHYVQTLLAQEGLE ELTRRSLTYS+WDLS SKDHERR WH
Sbjct: 238 WRDRPFPNDPSKEHNCIPDEHYVQTLLAQEGLEEELTRRSLTYSAWDLSYSKDHERRNWH 297

Query: 272 PATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLT 331
           P TYK++DAT  LIQSIK IDNIYYETE+RREWC+ KGKPS CFLFARKFTRPAALRLL 
Sbjct: 298 PVTYKFSDATLDLIQSIKGIDNIYYETEYRREWCTSKGKPSRCFLFARKFTRPAALRLLN 357

Query: 332 MSVLGA 337
           MS+LG 
Sbjct: 358 MSLLGV 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511696|ref|XP_003524559.1| PREDICTED: uncharacterized protein LOC100791308 [Glycine max]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/369 (68%), Positives = 295/369 (79%), Gaps = 39/369 (10%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFV----- 52
           MKRKVV        +KWK+K+FA IL+ FC GSL+ MQ +Y  +   +SL+ RFV     
Sbjct: 1   MKRKVV-------QHKWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEV 53

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVN 112
           Q PK+AFLFIARNRLPLEMVWD FF+G + +FSI+VH RPGFL +K TTRS YFL+RQVN
Sbjct: 54  QGPKVAFLFIARNRLPLEMVWDAFFRGGDRKFSIFVHCRPGFLLNKATTRSPYFLNRQVN 113

Query: 113 DSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS---------------------- 150
           DS+QV+WG +SMIEAER+LLRHAL+DP NDRFVFLSDS                      
Sbjct: 114 DSVQVEWGESSMIEAERVLLRHALSDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTSTSFV 173

Query: 151 --FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 208
             FADTKEGRYNPKM PVIPV+NWRKGSQWAVLTRKHA++VV D TVFPMFQ++CK+K L
Sbjct: 174 DSFADTKEGRYNPKMDPVIPVYNWRKGSQWAVLTRKHAKVVVEDETVFPMFQRYCKKKPL 233

Query: 209 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERR 268
           PEFWR H  PAD SK HNCIPDEHYVQTLLAQ+GLE E+TRRSLT++SWD+S+S++HERR
Sbjct: 234 PEFWRAHYIPADTSKVHNCIPDEHYVQTLLAQKGLEEEITRRSLTHTSWDISNSREHERR 293

Query: 269 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 328
           GWHP TYKY+DATP+L++ +KEIDNIYYETE+RREWCS KGKPS+CFLFARKFTR AALR
Sbjct: 294 GWHPVTYKYSDATPMLLKFVKEIDNIYYETEYRREWCSSKGKPSTCFLFARKFTRTAALR 353

Query: 329 LLTMSVLGA 337
           LL MSVLG 
Sbjct: 354 LLNMSVLGV 362

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811585|ref|XP_002873676.1| hypothetical protein ARALYDRAFT_909422 [Arabidopsis lyrata subsp. lyrata] gi|297319513|gb|EFH49935.1| hypothetical protein ARALYDRAFT_909422 [Arabidopsis lyrata subsp. lyrata]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/364 (68%), Positives = 289/364 (79%), Gaps = 32/364 (8%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSL-----RPRFVQKP 55
           MK+KV    QQK  Y+WKRKV+A ++  FC G+ V +Q ++  I +      +PR  QKP
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCLGTFVFIQARFNGITASLDSLKKPRLDQKP 57

Query: 56  KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
           +IAFLFIARNRLPLE+VWD FF+GE+ +FSIYVHSRPGF+ S+ TTRS +FLDRQVNDSI
Sbjct: 58  QIAFLFIARNRLPLELVWDAFFQGEDGKFSIYVHSRPGFVLSEATTRSKFFLDRQVNDSI 117

Query: 116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------------------F 151
           QVDWG ++MIEAER+LLRHAL DPFN RFVFLSDS                        F
Sbjct: 118 QVDWGESTMIEAERVLLRHALRDPFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSFVDSF 177

Query: 152 ADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEF 211
           ADTK+ RYNP+M P+IPVHNWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+RKSLPEF
Sbjct: 178 ADTKDSRYNPRMNPIIPVHNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRKSLPEF 237

Query: 212 WREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWH 271
           WR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK +ERRGWH
Sbjct: 238 WRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKSNERRGWH 297

Query: 272 PATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLT 331
           P TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRPAALRLL 
Sbjct: 298 PMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSHKGKPSPCFLFARKFTRPAALRLLR 357

Query: 332 MSVL 335
            S+L
Sbjct: 358 ESIL 361

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060092|ref|XP_002300039.1| predicted protein [Populus trichocarpa] gi|222847297|gb|EEE84844.1| predicted protein [Populus trichocarpa]

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 247/314 (78%), Positives = 268/314 (85%), Gaps = 25/314 (7%)

Query: 44  IMSLRPRF-VQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTR 102
           + SLR  F VQKPKIAFLFIARNRLPL+M+WD FFKG+ESRFSI+VHSRPGFLF+K  TR
Sbjct: 31  LASLRSHFIVQKPKIAFLFIARNRLPLDMLWDAFFKGQESRFSIFVHSRPGFLFNKANTR 90

Query: 103 SIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------ 150
           S YFL+RQVNDSIQVDWGGASMIEAERILLRHAL DP N+RFVFLSDS            
Sbjct: 91  SEYFLNRQVNDSIQVDWGGASMIEAERILLRHALVDPLNERFVFLSDSCIPLYNFSYTYD 150

Query: 151 ------------FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPM 198
                       FADTKEGRYNPKMAP++PV+NWRKGSQW VLTRKHAE+VVNDTTVFPM
Sbjct: 151 YIMSTSTSFVDSFADTKEGRYNPKMAPLVPVYNWRKGSQWVVLTRKHAEVVVNDTTVFPM 210

Query: 199 FQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWD 258
           FQQHCKR+SLPEFWR+H  PAD S EHNCIPDEHYVQTLLA+EGLEGE+TRRSLT+SSWD
Sbjct: 211 FQQHCKRRSLPEFWRDHPIPADTSMEHNCIPDEHYVQTLLAREGLEGEITRRSLTHSSWD 270

Query: 259 LSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFA 318
           LSSSKD ERRGWHP TYK++DATP LIQSIK+IDNIYYETE+RREWCS KGKPS CFLFA
Sbjct: 271 LSSSKDPERRGWHPVTYKFSDATPTLIQSIKDIDNIYYETEYRREWCSSKGKPSRCFLFA 330

Query: 319 RKFTRPAALRLLTM 332
           RKFTRPAA RLL M
Sbjct: 331 RKFTRPAAFRLLNM 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573337|ref|XP_003554818.1| PREDICTED: uncharacterized protein LOC100776366 [Glycine max]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/369 (67%), Positives = 292/369 (79%), Gaps = 38/369 (10%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFV----- 52
           MKR  + Q      +KWK+K+FA IL+ FC GSL+ MQ +Y  +   +SL+ RFV     
Sbjct: 1   MKRNKLVQ------HKWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEV 54

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVN 112
           Q PKIAFLFIARNRLPLEMVWD FF+G +S+FSI+VH RPGFL +K TTRS YFL+RQVN
Sbjct: 55  QGPKIAFLFIARNRLPLEMVWDAFFRGGDSKFSIFVHCRPGFLLNKATTRSPYFLNRQVN 114

Query: 113 DSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS---------------------- 150
           DS+QV+WG ASMIEAER+LLRHAL+DP NDRFVFLSDS                      
Sbjct: 115 DSVQVEWGEASMIEAERVLLRHALSDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTSTSFV 174

Query: 151 --FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 208
             FADTKEGRYNPKM PVIPV+NWRKGSQW VLTRKHA++VV D TVF MFQ++CK+K L
Sbjct: 175 DSFADTKEGRYNPKMDPVIPVYNWRKGSQWGVLTRKHAKVVVEDETVFLMFQRYCKKKPL 234

Query: 209 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERR 268
           PEFWR H  PAD SK HNCIPDEHYVQTLLAQ+GLE E+TRRSLT++SWD+S+S++++RR
Sbjct: 235 PEFWRAHYIPADTSKVHNCIPDEHYVQTLLAQKGLEEEITRRSLTHTSWDISNSREYDRR 294

Query: 269 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 328
           GWHP TYKY+DATP+L+  IKEIDNIY+ETE+RREWCS KGKPS+CFLFARKFTR AALR
Sbjct: 295 GWHPVTYKYSDATPMLLNFIKEIDNIYFETEYRREWCSSKGKPSTCFLFARKFTRTAALR 354

Query: 329 LLTMSVLGA 337
           LL MSVLG 
Sbjct: 355 LLNMSVLGV 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567851|ref|NP_196959.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|209863160|gb|ACI88738.1| At5g14550 [Arabidopsis thaliana] gi|332004663|gb|AED92046.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/371 (66%), Positives = 287/371 (77%), Gaps = 39/371 (10%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSL------------R 48
           MK+KV    QQK  Y+WKRKV+A ++  FCFG+ V +Q ++  I +             +
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKK 57

Query: 49  PRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLD 108
           PR  Q+P+IAFLFIARNRLPLE VWD FFKGE+ +FSIYVHSRPGF+ ++ TTRS YFLD
Sbjct: 58  PRLDQRPQIAFLFIARNRLPLEFVWDAFFKGEDGKFSIYVHSRPGFVLNEATTRSKYFLD 117

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------------ 150
           RQ+NDSIQVDWG ++MIEAER+LLRHAL D FN RFVFLSDS                  
Sbjct: 118 RQLNDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTP 177

Query: 151 ------FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCK 204
                 FADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+
Sbjct: 178 TSFVDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

Query: 205 RKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKD 264
           RKSLPEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK 
Sbjct: 238 RKSLPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKS 297

Query: 265 HERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRP 324
           +ERRGWHP TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRP
Sbjct: 298 NERRGWHPMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSSKGKPSPCFLFARKFTRP 357

Query: 325 AALRLLTMSVL 335
           AALRLL  ++L
Sbjct: 358 AALRLLRETIL 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51968788|dbj|BAD43086.1| putative protein [Arabidopsis thaliana]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/371 (66%), Positives = 286/371 (77%), Gaps = 39/371 (10%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSL------------R 48
           MK+KV    QQK  Y+WKRKV+A ++  FCFG+ V +Q ++  I +             +
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKK 57

Query: 49  PRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLD 108
           PR  Q+P+IAFLFIARNRLPLE VWD FFKGE+ +FSIYVHSRPGF+ ++ TTRS YFLD
Sbjct: 58  PRLDQRPQIAFLFIARNRLPLEFVWDAFFKGEDGKFSIYVHSRPGFVLNEATTRSKYFLD 117

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------------ 150
           RQ+NDSIQVDWG ++MIEAER+LLRHAL D FN RFVFLSDS                  
Sbjct: 118 RQLNDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTP 177

Query: 151 ------FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCK 204
                 FADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+
Sbjct: 178 TSFVDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

Query: 205 RKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKD 264
           RKSLPEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK 
Sbjct: 238 RKSLPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKS 297

Query: 265 HERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRP 324
           +ERRGWHP TYK++DATP LIQSIK IDN  YETE+RREWCS KGKPS CFLFARKFTRP
Sbjct: 298 NERRGWHPMTYKFSDATPDLIQSIKGIDNNNYETEYRREWCSSKGKPSPCFLFARKFTRP 357

Query: 325 AALRLLTMSVL 335
           AALRLL  ++L
Sbjct: 358 AALRLLRETIL 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087625|emb|CBI34881.3| unnamed protein product [Vitis vinifera]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/317 (75%), Positives = 265/317 (83%), Gaps = 25/317 (7%)

Query: 51  FVQKPKIAFLFIARNRLPLEMVWDKFFKGE-ESRFSIYVHSRPGFLFSKGTTRSIYFLDR 109
           F+Q+PKIAFLFIARNRLPL++VWD FF+ E E++FSI+VHSRPGFL +K TTRS+YFL+R
Sbjct: 5   FLQRPKIAFLFIARNRLPLDVVWDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNR 64

Query: 110 QVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS------------------- 150
           Q+NDSIQVDWG ASMI+AERILLR AL DP N+RFVFLSDS                   
Sbjct: 65  QLNDSIQVDWGEASMIQAERILLRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTST 124

Query: 151 -----FADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKR 205
                FADTKEGRYNPKM PVIPVHNWRKGSQW VLTRKHA+IVV D TVFPMFQQHCKR
Sbjct: 125 SFVDSFADTKEGRYNPKMDPVIPVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKR 184

Query: 206 KSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDH 265
           KSLPEFWR+H  PAD SKEHNCIPDEHYVQTLLAQEG E E+TRRSLT+SSWDLSSSKD 
Sbjct: 185 KSLPEFWRDHPLPADASKEHNCIPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDR 244

Query: 266 ERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPA 325
           ER+GWHP TYK++DATP+LIQSIK+IDNIYYETE+RREWC+ KGKP+ CFLFARKFTRPA
Sbjct: 245 ERKGWHPLTYKFSDATPMLIQSIKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPA 304

Query: 326 ALRLLTMSVLGANSNEA 342
           ALRLL MS LGA   E 
Sbjct: 305 ALRLLNMSALGAFHGET 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520047|ref|XP_003630312.1| BC10 protein [Medicago truncatula] gi|355524334|gb|AET04788.1| BC10 protein [Medicago truncatula]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/346 (69%), Positives = 278/346 (80%), Gaps = 31/346 (8%)

Query: 22  FAAILLG-FCFGSLVLMQCQYTRIM---SLRPRFV---QKPKIAFLFIARNRLPLEMVWD 74
           FA IL+   CFGSL+ MQ +YT ++   SL+ + V   QKPKIAFLFIARNRLPLE+VWD
Sbjct: 15  FALILVVVLCFGSLLFMQMRYTHVLGLVSLQHQLVSQVQKPKIAFLFIARNRLPLELVWD 74

Query: 75  KFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRH 134
            FF+G ++ FSI+VH RPGF+ ++ TTRS YFL+RQVNDSIQ+DWG ASMIEAERILLRH
Sbjct: 75  AFFRGGDNNFSIFVHPRPGFVLNEATTRSSYFLNRQVNDSIQIDWGEASMIEAERILLRH 134

Query: 135 ALADPFNDRFVFLSDS------------------------FADTKEGRYNPKMAPVIPVH 170
           AL DP NDRFVFLSDS                        FADTK GRYNPKM PVIPV+
Sbjct: 135 ALDDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTPTSFVDSFADTKGGRYNPKMDPVIPVY 194

Query: 171 NWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPD 230
           NWRKGSQWAVLTRKHA++VV D TVFPMFQ+ CK+K LPEFWR+   PAD SK HNCIPD
Sbjct: 195 NWRKGSQWAVLTRKHAKVVVEDDTVFPMFQKFCKKKPLPEFWRDQVIPADTSKIHNCIPD 254

Query: 231 EHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKE 290
           EHYVQTLLAQ+ LE ELTRRS+T+++WD+S+S+D ERRGWHP TYK++DATP+LI+ IKE
Sbjct: 255 EHYVQTLLAQKDLEKELTRRSVTHTAWDISNSRDRERRGWHPVTYKFSDATPMLIKFIKE 314

Query: 291 IDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLG 336
           IDNIYYETE+RREWC+ KGKPS+CFLFARKFTR AALRLL MSVLG
Sbjct: 315 IDNIYYETEYRREWCTSKGKPSTCFLFARKFTRTAALRLLNMSVLG 360

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2222637	377	AT5G14550 [Arabidopsis thalian	0.534	0.496	0.737	3.4e-128
TAIR|locus:2008890	383	AT1G11940 [Arabidopsis thalian	0.548	0.501	0.476	9.5e-80
TAIR|locus:504956294	378	AT1G62305 [Arabidopsis thalian	0.522	0.484	0.513	3.6e-76
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.265	0.225	0.458	2.7e-34
TAIR|locus:2181442	411	AT5G16170 [Arabidopsis thalian	0.262	0.223	0.484	1.2e-32
TAIR|locus:2202324	408	AT1G68390 [Arabidopsis thalian	0.277	0.237	0.44	1.9e-32
TAIR|locus:2027769	418	AT1G73810 [Arabidopsis thalian	0.268	0.224	0.473	2.5e-32
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.291	0.262	0.485	1.1e-28
TAIR|locus:2094781	383	AT3G21310 [Arabidopsis thalian	0.291	0.266	0.418	1.4e-28
TAIR|locus:2181945	386	AT5G11730 [Arabidopsis thalian	0.277	0.251	0.39	6.2e-28

TAIR|locus:2222637 AT5G14550 [Arabidopsis thaliana (taxid:3702)]

 Score = 768 (275.4 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
 Identities = 138/187 (73%), Positives = 155/187 (82%)

Query:   149 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 208
             DSFADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+RKSL
Sbjct:   182 DSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRKSL 241

Query:   209 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKDHERR 268
             PEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRR            K +ERR
Sbjct:   242 PEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKSNERR 301

Query:   269 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 328
             GWHP TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRPAALR
Sbjct:   302 GWHPMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSSKGKPSPCFLFARKFTRPAALR 361

Query:   329 LLTMSVL 335
             LL  ++L
Sbjct:   362 LLRETIL 368

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008890 AT1G11940 [Arabidopsis thaliana (taxid:3702)]

 Score = 502 (181.8 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
 Identities = 93/195 (47%), Positives = 125/195 (64%)

Query:   149 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 208
             DSF  TKE RY+ KM+PVIP   WRKGSQW  L R HAE++VND  VFP+F++ CKR   
Sbjct:   192 DSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFPVFKEFCKR--C 249

Query:   209 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKDHERR 268
             P      ++     K  NCIPDEHYVQTLL  +GLE E+ RR            K +E +
Sbjct:   250 PPLGTNEAWLFLKQKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTVWNVSGTK-YEAK 308

Query:   269 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 328
              WHP T+   ++ P  I+ IK+ID++YYE+E R EWC    KP  CFLFARKFT  AA+R
Sbjct:   309 SWHPVTFTLENSGPEEIKEIKKIDHVYYESESRTEWCKADSKPVPCFLFARKFTNEAAMR 368

Query:   329 LLTMSVLGANSNEAI 343
             +++  ++G+++N+ +
Sbjct:   369 IVSEGLIGSSANKTL 383

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956294 AT1G62305 [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
 Identities = 96/187 (51%), Positives = 119/187 (63%)

Query:   149 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 208
             DSF D K+ RY  KM PVI    WRKGSQW  L R HAE++VND TVFP+FQ+ CKR SL
Sbjct:   187 DSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKR-SL 244

Query:   209 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKDHERR 268
             P   R++       + HNCIPDEHYVQTLL   GLE E+ RR            K  E +
Sbjct:   245 PLDPRKNWLYLK-KRRHNCIPDEHYVQTLLTMRGLENEMERRTVTYTTWNLSAKKA-EAK 302

Query:   269 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 328
              WHP T+   +  P  I+ IK+I+++YYE+E+R EWC    KP  CFLFARKFTR AA+R
Sbjct:   303 SWHPLTFTSDNCGPEEIEGIKKINHVYYESEYRTEWCRANSKPVPCFLFARKFTRGAAMR 362

Query:   329 LLTMSVL 335
             LL+  ++
Sbjct:   363 LLSEGLI 369

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 2.7e-34, Sum P(3) = 2.7e-34
 Identities = 44/96 (45%), Positives = 63/96 (65%)

Query:    55 PKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDS 114
             PK+AF+F+ R  LP+  +W+KFFKG E   S+YVH+ PG+      +R   F DRQ+  S
Sbjct:   142 PKVAFMFLTRGPLPMLPLWEKFFKGNEKYLSVYVHTPPGY--DMNVSRDSPFYDRQI-PS 198

Query:   115 IQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
              +V+WG   + +AE+ LL +AL D  N+RFV LS+S
Sbjct:   199 QRVEWGSPLLTDAEKRLLANALLDFSNERFVLLSES 234

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181442 AT5G16170 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
 Identities = 46/95 (48%), Positives = 64/95 (67%)

Query:    56 KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
             K+AF+F+   RLPL  +W+KFF+G E  +SIYVH+ P F  S   T S+++  R++  S 
Sbjct:   136 KVAFMFMTGGRLPLAGLWEKFFEGHEGFYSIYVHTNPSFQDSFPET-SVFY-SRRI-PSQ 192

Query:   116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
              V WG +SM++AE+ LL +AL D  N RFV LSDS
Sbjct:   193 PVYWGTSSMVDAEKRLLANALLDESNQRFVLLSDS 227

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202324 AT1G68390 [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 1.9e-32, Sum P(4) = 1.9e-32
 Identities = 44/100 (44%), Positives = 65/100 (65%)

Query:    51 FVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQ 110
             F + PK+AF+F+ +  LPL  +W++FF+G E  F+IYVHS P +  ++       F  R 
Sbjct:   133 FPRTPKVAFMFMTKGHLPLARLWERFFRGHEGLFTIYVHSYPSY--NQSDPEDSVFRGRH 190

Query:   111 VNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
             +  S +VDWG  +M+EAE+ LL +AL D  N+RFV LS+S
Sbjct:   191 I-PSKRVDWGYVNMVEAEQRLLANALLDISNERFVLLSES 229

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2027769 AT1G73810 [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
 Identities = 45/95 (47%), Positives = 60/95 (63%)

Query:    56 KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
             K AF+F+ R +LPL  +W++FFKG E  FSIY+H+   F F   T  +  F  R++  S 
Sbjct:   147 KAAFMFLTRGKLPLAKLWERFFKGHEGLFSIYIHTSDPFYFDDHTPETSPFYRRRI-PSK 205

Query:   116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
             +V WG  SM+ AER LL +AL D  N RFV LS+S
Sbjct:   206 EVGWGMVSMVAAERRLLANALLDAGNHRFVLLSES 240

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
 Identities = 52/107 (48%), Positives = 68/107 (63%)

Query:    44 IMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRS 103
             I+ L P    K KIAF+F+    LP E +WDKFF+G+E RFSIY+H  P  L     +R 
Sbjct:    86 ILRLPPALTAKSKIAFMFLTPGTLPFEKLWDKFFQGQEGRFSIYIH--PSRLRPVHISR- 142

Query:   104 IYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
              +F DR+++ S  V WG  SM++AER LL +AL DP N  FV LS+S
Sbjct:   143 -HFSDREIH-SDHVTWGRISMVDAERRLLANALEDPDNQHFVLLSES 187

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2094781 AT3G21310 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
 Identities = 46/110 (41%), Positives = 68/110 (61%)

Query:    46 SLRPR-----FVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGT 100
             S+ PR     F + PK+AF+F+ +  LP   +W++FFKG E  +SIYVH+ P +  S   
Sbjct:   100 SMEPRILDYPFKRVPKMAFMFLTKGPLPFAPLWERFFKGHEGFYSIYVHTLPNYR-SDFP 158

Query:   101 TRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
             + S+++  RQ+  S  V WG  SM +AER LL +AL D  N+ FV LS++
Sbjct:   159 SSSVFYR-RQI-PSQHVAWGEMSMCDAERRLLANALLDISNEWFVLLSEA 206

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181945 AT5G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
 Identities = 39/100 (39%), Positives = 62/100 (62%)

Query:    51 FVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQ 110
             F + PK+AF+F+ +  LPL  +W++F KG +  +S+Y+H  P F  +K    S+ F  RQ
Sbjct:   113 FKRVPKVAFMFLTKGPLPLASLWERFLKGHKGLYSVYLHPHPSFT-AKFPASSV-FHRRQ 170

Query:   111 VNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDS 150
             +   +  +WG  SM +AE+ LL +AL D  N+ FV +S+S
Sbjct:   171 IPSQV-AEWGRMSMCDAEKRLLANALLDVSNEWFVLVSES 209

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	6e-59

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  190 bits (484), Expect = 6e-59
 Identities = 89/271 (32%), Positives = 121/271 (44%), Gaps = 67/271 (24%)

Query: 57  IAFLFIA-RNRLPLEMVWDKFFKGEESRFSIYVHSR-PGFLFSKGTTR-SIYFLDRQVND 113
           IAF+F+  +  LP   +W +FF   ++ + IYV ++ P     +     S +F  R +  
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHPQNLYCIYVDAKSPSEFKERLRALASCFFNVRVIPK 60

Query: 114 SIQVDWGGASMIEAERILLRHALA-DPFNDRFVFLS------------------------ 148
           S  V WGG SM++AER LL + L  DP  D FV LS                        
Sbjct: 61  SEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGNNS 120

Query: 149 --DSFADTK---EGRYNPKMAPVIPVHN----WRKGSQWAVLTRKHAEIVVNDTTVFPMF 199
             +SF D      GRYNP+M P I + +    WRKGSQW VL+R  AE VV+D   +P+F
Sbjct: 121 FVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYPLF 180

Query: 200 QQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEG-LEGELTRRSLTYSSWD 258
           + +C                     + C PDEHY  TLL   G        R+LTY  W 
Sbjct: 181 KYYC---------------------NTCYPDEHYFPTLLGMPGHFPNTCVNRTLTYVDWS 219

Query: 259 LSSSKDHERRGWHPATYKYADATPLLIQSIK 289
                   R G HP TY+  D  P  ++ I+
Sbjct: 220 --------RGGCHPKTYRPCDIGPEDLKRIR 242

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.76

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=1.6e-41  Score=340.38  Aligned_cols=213  Identities=22%  Similarity=0.262  Sum_probs=164.3

Q ss_pred             CCCCcEEEEEEeC-CC-CchHHHHHHHhccCCCceeEEEEeCCCCcccC-------------CCCCcceeeccccCCcee
Q 018810           52 VQKPKIAFLFIAR-NR-LPLEMVWDKFFKGEESRFSIYVHSRPGFLFSK-------------GTTRSIYFLDRQVNDSIQ  116 (350)
Q Consensus        52 ~~~~KiAfLiLAh-~~-~~l~~Lw~~ff~l~~~~~sIYIHvD~k~~~~~-------------~~~~s~vf~~r~i~~Rv~  116 (350)
                      ..+|||||||++| ++ .++++|+.+   ++++++.+|||+|++++..+             ....++|++   +.++..
T Consensus        75 ~~~~r~AYLI~~h~~d~~~l~RLL~a---LYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~v---l~k~~~  148 (421)
T PLN03183         75 DKLPRFAYLVSGSKGDLEKLWRTLRA---LYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYM---ITKANL  148 (421)
T ss_pred             CCCCeEEEEEEecCCcHHHHHHHHHH---hcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEE---Eeccee
Confidence            3489999999999 56 678999999   98999999999999975321             012345655   356788


Q ss_pred             eecCcccHHHHHHHHHHHHhc-CCCCCEEEEeccc----------------------ccCCC-C------CCCCCC----
Q 018810          117 VDWGGASMIEAERILLRHALA-DPFNDRFVFLSDS----------------------FADTK-E------GRYNPK----  162 (350)
Q Consensus       117 V~WGg~SlVeAel~LLr~AL~-d~~~~~fvLLSGs----------------------F~e~~-~------~RY~~~----  162 (350)
                      |.|||+|||+||+.+++.+|+ ..+++|||+|||+                      |++.. .      .|+.+.    
T Consensus       149 V~WGG~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~p  228 (421)
T PLN03183        149 VTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDP  228 (421)
T ss_pred             eccCChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecC
Confidence            999999999999999999997 6789999999993                      22210 0      111110    


Q ss_pred             ---C-----------CCCCCc-cccccccceeeecHHHHHHhhcccccchH-HHHhhhccCCccccccCCCCCCCCCCCC
Q 018810          163 ---M-----------APVIPV-HNWRKGSQWAVLTRKHAEIVVNDTTVFPM-FQQHCKRKSLPEFWREHSFPADPSKEHN  226 (350)
Q Consensus       163 ---m-----------~p~i~~-~~~~kGSQW~sLtR~~Ae~Vv~d~~~~~~-F~~~c~~~~~~~~~~~~~~~~~~~~~~~  226 (350)
                         +           .+.+|. .++++|||||+|||++|+||+...+..+. ...|++                    .+
T Consensus       229 gl~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~--------------------~t  288 (421)
T PLN03183        229 GLYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYT--------------------NF  288 (421)
T ss_pred             ceeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHh--------------------cC
Confidence               0           012232 47999999999999999999987655443 334444                    47


Q ss_pred             ccCchhHHHHHHhccC-CCCccccCceeEEeccCCCCCCCCCCCCCccccccCCCCHHHHHHHhhccccccccccccccc
Q 018810          227 CIPDEHYVQTLLAQEG-LEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWC  305 (350)
Q Consensus       227 ~~pDE~ffqTLL~ns~-~~~~i~~~~LrYidW~~~~~~~~~~~g~hP~~~~~~D~t~~li~~i~~~d~~~~~~~~~~~~c  305 (350)
                      ++|||+||||+|+|++ |.+.+.|++||||+|+.       .+..||++|+.+|+     ++|.                
T Consensus       289 ~~pdE~fFqTVl~NS~~f~~t~vn~nLRyI~W~~-------~~~~~P~~l~~~D~-----~~l~----------------  340 (421)
T PLN03183        289 VSSPEGYFHTVICNVPEFAKTAVNHDLHYISWDN-------PPKQHPHTLSLNDT-----EKMI----------------  340 (421)
T ss_pred             CCCchHHHHHHHhhcccccccccCCceeEEecCC-------CCCCCCcccCHHHH-----HHHH----------------
Confidence            7999999999999997 99999999999999983       22349999999999     6666                


Q ss_pred             cCCCCCCCCceEEecCChh
Q 018810          306 SDKGKPSSCFLFARKFTRP  324 (350)
Q Consensus       306 ~~~g~~~s~~LFARKF~~~  324 (350)
                            +|+.+|||||+.+
T Consensus       341 ------~S~~lFARKFd~d  353 (421)
T PLN03183        341 ------ASGAAFARKFRRD  353 (421)
T ss_pred             ------hCCCccccCCCCC
Confidence                  4888999999976

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=1.9e-41  Score=315.47  Aligned_cols=200  Identities=32%  Similarity=0.482  Sum_probs=129.2

Q ss_pred             EEEEEEeCC-CC-chHHHHHHHhccCCCceeEEEEeCCCCcc---c---C-CCCCcceeeccccCCceeeecCcccHHHH
Q 018810           57 IAFLFIARN-RL-PLEMVWDKFFKGEESRFSIYVHSRPGFLF---S---K-GTTRSIYFLDRQVNDSIQVDWGGASMIEA  127 (350)
Q Consensus        57 iAfLiLAh~-~~-~l~~Lw~~ff~l~~~~~sIYIHvD~k~~~---~---~-~~~~s~vf~~r~i~~Rv~V~WGg~SlVeA  127 (350)
                      ||||||||+ +. ++++|++.   ++++.+.+|||+|+++..   +   . ......+++   +++|++|.|||+|||+|
T Consensus         1 iAylil~h~~~~~~~~~l~~~---l~~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~---v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQLERLLRL---LYHPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHF---VPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHHHHHHHHH---H--TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE----SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHHHHHHHHH---hcCCCCEEEEEEcCCCChHHHHHHHHhcccCCceee---cccccccccCCccHHHH
Confidence            799999988 64 45888887   677788899999999531   1   1 112234444   46799999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecccccC------------CCC-----------------CCCCCC----CCCCCCccccc
Q 018810          128 ERILLRHALA-DPFNDRFVFLSDSFAD------------TKE-----------------GRYNPK----MAPVIPVHNWR  173 (350)
Q Consensus       128 el~LLr~AL~-d~~~~~fvLLSGsF~e------------~~~-----------------~RY~~~----m~p~i~~~~~~  173 (350)
                      |+.||++|++ ++.++|||||||+.+.            ...                 +||++.    +.+.++..+++
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 8899999999994321            110                 122221    11223335789


Q ss_pred             cccceeeecHHHHHHhhcccccchHHHHhhhccCCccccccCCCCCCCCCCCCccCchhHHHHHHhcc-CCCCccccCce
Q 018810          174 KGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQE-GLEGELTRRSL  252 (350)
Q Consensus       174 kGSQW~sLtR~~Ae~Vv~d~~~~~~F~~~c~~~~~~~~~~~~~~~~~~~~~~~~~pDE~ffqTLL~ns-~~~~~i~~~~L  252 (350)
                      +|||||+|||++|++|+++....+.|.++|+                    +++||||+||||||.|+ ++.+.+.++++
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~--------------------~~~~pDE~ffqTll~n~~~~~~~~~~~~~  214 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYFR--------------------FSLCPDESFFQTLLNNSGHFKDTIVNRNL  214 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT---------------------TSSSGGGTHHHHH--SSGGG-B-TTTSSS
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhhc--------------------CccCcchhhHHHhhcccchhcccccCCCE
Confidence            9999999999999999988888889988886                    58899999999999999 67888999999


Q ss_pred             eEEeccCCCCCCCCCCCCCccccccCCCCHHHHHHHh
Q 018810          253 TYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIK  289 (350)
Q Consensus       253 rYidW~~~~~~~~~~~g~hP~~~~~~D~t~~li~~i~  289 (350)
                      |||+|+.       ++++||++++..+++++.++.|+
T Consensus       215 r~i~W~~-------~~~~~p~~~~~~~~~~~d~~~~~  244 (244)
T PF02485_consen  215 RYIDWSR-------RGGCHPKTLTICDLGPEDLPWLK  244 (244)
T ss_dssp             EEE-BTG-------T-SS---SSEEEE--GGGHHHH-
T ss_pred             EEEECCC-------CCCCCCCeeeeeeeCHHHHHhhC
Confidence            9999982       56889999999999999888764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.76  E-value=5.3e-18  Score=172.28  Aligned_cols=194  Identities=19%  Similarity=0.214  Sum_probs=139.0

Q ss_pred             cEEEEEEeCCC-CchHHHHHHHhccCCCceeEEEEeCCCCccc-------CCCCCcceeeccccCCceeeecCcccHHHH
Q 018810           56 KIAFLFIARNR-LPLEMVWDKFFKGEESRFSIYVHSRPGFLFS-------KGTTRSIYFLDRQVNDSIQVDWGGASMIEA  127 (350)
Q Consensus        56 KiAfLiLAh~~-~~l~~Lw~~ff~l~~~~~sIYIHvD~k~~~~-------~~~~~s~vf~~r~i~~Rv~V~WGg~SlVeA  127 (350)
                      =+||+.++|++ .++++++.+   .-++++.++||+|.++..+       .......|++   ++.+..|.|||.|++.|
T Consensus       104 ~~a~~~~v~kd~~~verll~a---iYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v---~~k~~~v~~~G~s~l~a  177 (439)
T KOG0799|consen  104 PAAFLRVVYKDYEQVERLLQA---IYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIV---LPKRESVTYGGHSILAA  177 (439)
T ss_pred             ceEEEEeecccHHHHHHHHHH---HhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceEE---eccccceecCCchhhHH
Confidence            56788888888 677999999   6778899999999987532       1223345555   24688999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEeccccc---------------------CC--CCC-CC------CC-----------CCCC
Q 018810          128 ERILLRHALA-DPFNDRFVFLSDSFA---------------------DT--KEG-RY------NP-----------KMAP  165 (350)
Q Consensus       128 el~LLr~AL~-d~~~~~fvLLSGsF~---------------------e~--~~~-RY------~~-----------~m~p  165 (350)
                      .+..|+..++ ..+++||++|||+.+                     +.  ..+ |+      .+           .+..
T Consensus       178 ~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~~~~~  257 (439)
T KOG0799|consen  178 HLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSPLPWV  257 (439)
T ss_pred             HHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCCCccc
Confidence            9999999998 457999999999432                     21  011 11      10           0111


Q ss_pred             CCCc-cccccccceeeecHHHHHHhhcccccchHHHHhhhccCCccccccCCCCCCCCCCCCccCchhHHHHHHhccCCC
Q 018810          166 VIPV-HNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLE  244 (350)
Q Consensus       166 ~i~~-~~~~kGSQW~sLtR~~Ae~Vv~d~~~~~~F~~~c~~~~~~~~~~~~~~~~~~~~~~~~~pDE~ffqTLL~ns~~~  244 (350)
                      .+|. ..+++||.|++|+|++|++++... ..+.+.++++                    .++.|||+|++||+.|+ +.
T Consensus       258 ~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~-~~~~ll~~~~--------------------~t~~~dE~f~~Tl~~n~-~~  315 (439)
T KOG0799|consen  258 ILPTALKLFKGSAWVSLSRAFVEYLISGN-LPRTLLMYYN--------------------NTYSPDEGFFHTLQCNP-FG  315 (439)
T ss_pred             cCCCceEEEecceeEEEeHHHHHHHhcCc-cHHHHHHHHh--------------------CccCcchhhhHhhhccc-cC
Confidence            1232 368999999999999999999993 3455555655                    47899999999999999 55


Q ss_pred             CccccCc--eeEEeccCCCCCCCCCCCCCccccccCCC
Q 018810          245 GELTRRS--LTYSSWDLSSSKDHERRGWHPATYKYADA  280 (350)
Q Consensus       245 ~~i~~~~--LrYidW~~~~~~~~~~~g~hP~~~~~~D~  280 (350)
                      ......+  +||+.|...-   .+.-+.||..++..|.
T Consensus       316 ~~g~~~~~~lr~~~W~~~~---~~~~~~~c~~~~~~~~  350 (439)
T KOG0799|consen  316 MPGVFNDECLRYTNWDRKD---VDPPKQHCHSLTVRDF  350 (439)
T ss_pred             CCCcccchhhcceeccccc---ccccccCCcccccccc
Confidence            5445566  9999998311   0012346777777776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	350
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	4e-17

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score = 81.0 bits (199), Expect = 4e-17
 Identities = 36/315 (11%), Positives = 77/315 (24%), Gaps = 77/315 (24%)

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVH----SRPGFLFSKGTTRSIYFLD 108
               IA+  +  +++  EM+          +    +H    +   FL +     S +   
Sbjct: 82  VGFPIAYSIVVHHKI--EMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNV 139

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFN-DRFVFLSDS----------------- 150
              +    V +   + ++A+   ++       N    + L                    
Sbjct: 140 FVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS 199

Query: 151 ----------------------FADTKEGRYNPKMAPVIPVHN--WRKGSQWAVLTRKHA 186
                                 +A       N  +    P        GS + V+TR++ 
Sbjct: 200 TGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGSAYFVVTREYV 259

Query: 187 EIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGE 246
             V+ +  +  + +                       +    PDE    T+     + G 
Sbjct: 260 GYVLENENIQKLMEWA---------------------QDTYSPDEFLWATIQRIPEVPGS 298

Query: 247 LTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCS 306
               +    S     +       W       ++  P    S   + ++         W  
Sbjct: 299 FPSSNKYDLSD---MNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWML 355

Query: 307 DKGKPSSCFLFARKF 321
                    LFA KF
Sbjct: 356 -----RQHHLFANKF 365

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=2.7e-42  Score=343.14  Aligned_cols=229  Identities=14%  Similarity=0.113  Sum_probs=169.7

Q ss_pred             CCCcEEEEEEeCCC-CchHHHHHHHhccCCCceeEEEEeCCCCccc--C-----CCCCcceeeccccCCceeeecCcccH
Q 018810           53 QKPKIAFLFIARNR-LPLEMVWDKFFKGEESRFSIYVHSRPGFLFS--K-----GTTRSIYFLDRQVNDSIQVDWGGASM  124 (350)
Q Consensus        53 ~~~KiAfLiLAh~~-~~l~~Lw~~ff~l~~~~~sIYIHvD~k~~~~--~-----~~~~s~vf~~r~i~~Rv~V~WGg~Sl  124 (350)
                      .++||||||++|++ .++++|++.   +.++.+.+|||+|+++...  .     ......+++   +.+|+.|.|||+||
T Consensus        82 ~~~kiAflil~h~d~~~l~rll~~---ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v---~~~~~~v~WGg~S~  155 (391)
T 2gak_A           82 VGFPIAYSIVVHHKIEMLDRLLRA---IYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFV---ASQLESVVYASWTR  155 (391)
T ss_dssp             HTSCEEEEEEECSCHHHHHHHHHH---HCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEE---CSSCCCCCTTSHHH
T ss_pred             cCCCEEEEEEecCCHHHHHHHHHH---HhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEE---eccCcccccCCchH
Confidence            46899999999998 456887777   7778999999999997421  0     111234444   24799999999999


Q ss_pred             HHHHHHHHHHHhc-CCCCCEEEEecccc---------------------cCCC------CCC--CCCC----------CC
Q 018810          125 IEAERILLRHALA-DPFNDRFVFLSDSF---------------------ADTK------EGR--YNPK----------MA  164 (350)
Q Consensus       125 VeAel~LLr~AL~-d~~~~~fvLLSGsF---------------------~e~~------~~R--Y~~~----------m~  164 (350)
                      |+||++||+.||+ +++|+|||||||++                     ++..      ..|  |+..          +.
T Consensus       156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~~~  235 (391)
T 2gak_A          156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIV  235 (391)
T ss_dssp             HHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeeccc
Confidence            9999999999998 55899999999943                     3210      122  1110          00


Q ss_pred             -CCCC-ccccccccceeeecHHHHHHhhcccccchHHHHhhhccCCccccccCCCCCCCCCCCCccCchhHHHHHHhccC
Q 018810          165 -PVIP-VHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEG  242 (350)
Q Consensus       165 -p~i~-~~~~~kGSQW~sLtR~~Ae~Vv~d~~~~~~F~~~c~~~~~~~~~~~~~~~~~~~~~~~~~pDE~ffqTLL~ns~  242 (350)
                       ..+| ..+|++|||||+|||++|++|++|.. .+.|.++|+                    ++|+|||+|||||+.+++
T Consensus       236 k~~~P~~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~~~k--------------------~t~~pDE~ffqTll~~~~  294 (391)
T 2gak_A          236 KAPPPLKTPLFSGSAYFVVTREYVGYVLENEN-IQKLMEWAQ--------------------DTYSPDEFLWATIQRIPE  294 (391)
T ss_dssp             CCCCSCSSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHHHHT--------------------TSSSGGGTHHHHHTTSTT
T ss_pred             ccCCccccceecccceeEecHHHHHHHHhCCc-HHHHHHHHc--------------------CCcCCchhHHHHHhhccC
Confidence             1123 25899999999999999999999854 678888998                    589999999999999876


Q ss_pred             CCCc----------cccCceeEEeccCCCCCCCCCCCCCcc----------ccccCCCCHHHHHHHhhcccccccccccc
Q 018810          243 LEGE----------LTRRSLTYSSWDLSSSKDHERRGWHPA----------TYKYADATPLLIQSIKEIDNIYYETEHRR  302 (350)
Q Consensus       243 ~~~~----------i~~~~LrYidW~~~~~~~~~~~g~hP~----------~~~~~D~t~~li~~i~~~d~~~~~~~~~~  302 (350)
                      +.+.          ..++++|||+|+..... ..+|++||.          +|+.+|+     +.|+             
T Consensus       295 ~pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~-~~~G~p~p~c~~~~~~~~C~~~~~Dl-----~~l~-------------  355 (391)
T 2gak_A          295 VPGSFPSSNKYDLSDMNAIARFVKWQYFEGD-VSNGAPYPPCSGVHVRSVCVFGAGDL-----SWML-------------  355 (391)
T ss_dssp             STTCCCSSGGGCBCTTTSSSEEECBTTTCSC-GGGTCSSCCCSSEEETTEEECCGGGH-----HHHT-------------
T ss_pred             CCCccccccccccccccCceEEEEecccCCc-cccCCCCCCCccceecceeeecHHHH-----HHHH-------------
Confidence            4332          24789999999731100 002334666          8998998     6666             


Q ss_pred             ccccCCCCCCCCceEEecCChhhHHHHHhhhhcc
Q 018810          303 EWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLG  336 (350)
Q Consensus       303 ~~c~~~g~~~s~~LFARKF~~~~~~~Ll~~~~~~  336 (350)
                               .+++||||||+++++..+|+..+..
T Consensus       356 ---------~s~~lFARKF~~~~d~~~l~~l~~~  380 (391)
T 2gak_A          356 ---------RQHHLFANKFDMDVDPFAIQCLDEH  380 (391)
T ss_dssp             ---------TSCCSEEECCCTTTCHHHHHHHHHH
T ss_pred             ---------hCCCceEEccCCccCHHHHHHHHHH
Confidence                     3789999999999888898876643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00