Citrus Sinensis ID: 018824

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHcHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mesrvlsrattttttisslrrsplenhqnvsfislkpigavgeggnviwgrqlrpalllessnapaglfagkkEILRPilatasspaegsdsageaapvrffdrypalvTGFFFFMWYFLNVIFNILNkriynyfpyPYFVSVIHLLVGVVYCLVSWAvglpkrapidskLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYskkamtdmdstNIYAYISIIALFvcippaiivegpqlIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Flexible Loop (DISEMBL)
mesrvlsrattttttisslrrsplenhqnvsFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATasspaegsdsaGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Low Complexity Region (SEG)
MESRVLSRAttttttISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Disordered region (IsUnstruct)
*****************************VSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPIL*****************PVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCC**
Disordered Region (DISOPRED)
**********************************************************************************************************ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Disordered Region (DISEMBL)
****************SSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILAT*************AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Disordered Region (DISPRO)
***************************************************************************************************RFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCCNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
Q9ZSR7	410	Triose phosphate/phosphat	yes	no	0.957	0.817	0.766	1e-149
P21727	402	Triose phosphate/phosphat	N/A	no	0.937	0.815	0.765	1e-147
P49131	408	Triose phosphate/phosphat	N/A	no	0.962	0.825	0.747	1e-146
P49132	407	Triose phosphate/phosphat	N/A	no	0.957	0.823	0.729	1e-143
P11869	404	Triose phosphate/phosphat	N/A	no	0.942	0.816	0.731	1e-142
P52177	407	Triose phosphate/phosphat	N/A	no	0.942	0.810	0.747	1e-141
Q9FTT3	417	Triose phosphate/phosphat	yes	no	0.831	0.697	0.762	1e-134
P29463	414	Triose phosphate/phosphat	N/A	no	0.948	0.801	0.692	1e-131
P49133	409	Triose phosphate/phosphat	N/A	no	0.86	0.735	0.741	1e-123
Q9M5A9	388	Glucose-6-phosphate/phosp	no	no	0.737	0.664	0.427	2e-53

>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1

 Score =  529 bits (1362), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/347 (76%), Positives = 293/347 (84%), Gaps = 12/347 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFIS-----LKPIGAVGEGGNVIWGRQLRP 55
           MESRVL RAT     I  LRR     H+  S  S     +KPIG +GEG N+I GRQLRP
Sbjct: 1   MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query: 56  ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
            LLL+SS    G    K+EIL+P+ A A   AEG D+AG+A  V F  +YP LVTGFFFF
Sbjct: 61  ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGDAK-VGFLAKYPWLVTGFFFF 113

Query: 116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct: 114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query: 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct: 174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query: 236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 295
           V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC
Sbjct: 234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVC 293

Query: 296 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           IPPAIIVEGP+L+ HG +DAI+KVGM KFISDLFWVGMFYHLYNQ+ 
Sbjct: 294 IPPAIIVEGPKLLNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQLA 340

Triose phosphate/phosphate translocator that transports inorganic phosphate, 3-phosphoglycerate (3-PGA) and triose phosphate. Functions in the export of photoassimilates from chloroplasts during the day. In the light, triose phosphates are exported from the chloroplast stroma in counter exchange with inorganic phosphate (Pi), generated during sucrose biosynthesis in the cytosol. Involved in photosynthetic acclimation, a light response resulting in increased tolerance to high-intensity light.
Arabidopsis thaliana (taxid: 3702)

>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1

 Score =  522 bits (1344), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/346 (76%), Positives = 289/346 (83%), Gaps = 18/346 (5%)

Query: 1   MESRVLSRATTTTT--TISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRVLSRATT ++  T++ L R PL N    S  S+K  G+V +GGN++WGRQLRP L 
Sbjct: 1   MESRVLSRATTLSSLPTLNKLHRLPLAN---ASLPSVKSFGSVSDGGNLVWGRQLRPELC 57

Query: 59  LESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFM 116
                  + +      +LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF 
Sbjct: 58  -------SPVLKKGASLLRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFT 106

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID  LLKLLI
Sbjct: 107 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLI 166

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHT+KALEPFFNAAASQFILGQ +P+TLWLSLAPVV
Sbjct: 167 PVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI 296
           IGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCI
Sbjct: 227 IGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCI 286

Query: 297 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           PPA+I+EGP L+K G +DAI+KVG+VKF+SDLFWVGMFYHLYNQV 
Sbjct: 287 PPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVA 332

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Pisum sativum (taxid: 3888)

>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1

 Score =  517 bits (1332), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/345 (74%), Positives = 281/345 (81%), Gaps = 8/345 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS   TT + I  L R               P      GGN++WGRQLRP+LL  
Sbjct: 1   MESRVLSSGATTISGIPRLTRPAGRTTTTTVVAVASPAKLNTNGGNLVWGRQLRPSLLNL 60

Query: 61  SSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWY 118
             ++P  L     K+++L+P  ATAS      DSAG+AAPV FF +YP LVTGFFFFMWY
Sbjct: 61  DHSSPVSLVTKPVKRDVLKPCTATAS------DSAGDAAPVGFFAKYPFLVTGFFFFMWY 114

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVS IHL VGVVYCL  WAVGLPKRAP+DS LLKLLIPV
Sbjct: 115 FLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPV 174

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           A CHALGHVTSNVSFAAVAVSFTHTIK+LEPFFNAAASQFILGQ +P+TLWLSLAPVVIG
Sbjct: 175 AFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIG 234

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP 298
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISII+L  CIPP
Sbjct: 235 VSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIISLLFCIPP 294

Query: 299 AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCI 343
           AII+EGPQL+KHG SDAI+KVGM KFISDLFWVGMFYHLYNQ+ I
Sbjct: 295 AIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAI 339

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Flaveria pringlei (taxid: 4226)

>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/344 (72%), Positives = 280/344 (81%), Gaps = 9/344 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS   T  + +  L + P       +     P      GGNV+WGRQLRP+LL  
Sbjct: 1   MESRVLSSGATAISGVPRLTK-PAGRITTTTVAVAFPARLNATGGNVVWGRQLRPSLLNL 59

Query: 61  SSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWY 118
             ++P  L     K+++L+P  ATAS      DSAG+AAPV F  +YP LVTGFFFFMWY
Sbjct: 60  DHSSPVSLVTKPVKRDVLKPCSATAS------DSAGDAAPVGFLAKYPFLVTGFFFFMWY 113

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW VGLPKRAP+DS +LKLLIPV
Sbjct: 114 FLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPV 173

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
             CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P++LWLSLAPVVIG
Sbjct: 174 GFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIG 233

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP 298
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  CIPP
Sbjct: 234 VSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALLFCIPP 293

Query: 299 AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           A++ EGPQL+KHG +DAI+KVGM+KFISDLFWVGMFYHLYNQ+ 
Sbjct: 294 AVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIA 337

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Flaveria trinervia (taxid: 4227)

>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1

 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/346 (73%), Positives = 284/346 (82%), Gaps = 16/346 (4%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSF---ISLK-PIGAVGEGGNVIWGRQLRPA 56
           MESRVLSR    TT I++L +    + +  SF     +K P+G V +GG++ WGRQLRP 
Sbjct: 1   MESRVLSR----TTAIAALPKLFRPSREAASFGFATGVKTPVGLVKDGGSLTWGRQLRPV 56

Query: 57  LLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFM 116
           LLLE      G    ++E       TA  P   +  +   A   F ++YPALVTG FFFM
Sbjct: 57  LLLEPVQT--GPVCSRRE------KTAVQPCRAASGSSGEAKTGFLEKYPALVTGSFFFM 108

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW+VGLPKRAP+DSKLLKLLI
Sbjct: 109 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLI 168

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSLAPVV
Sbjct: 169 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVV 228

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI 296
           IGVSMASLTELSFNW GFISAMISN+SFTYRS+YSKKAMTDMDSTNIYAYISIIALFVC+
Sbjct: 229 IGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTDMDSTNIYAYISIIALFVCL 288

Query: 297 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLFWVGMFYHLYNQ+ 
Sbjct: 289 PPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLA 334

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Spinacia oleracea (taxid: 3562)

>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1

 Score =  501 bits (1289), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/349 (74%), Positives = 294/349 (84%), Gaps = 19/349 (5%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLE--NHQ----NVSFISL-KPIGAVGEGGNVIWGRQL 53
           MESRVL RAT T T +  LRR P+   N Q    + SF +  KPIG++GEGGN+I GRQL
Sbjct: 1   MESRVLLRATETVTGVPQLRR-PIRAINRQFSTASSSFTAFAKPIGSIGEGGNLISGRQL 59

Query: 54  RPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFF 113
           RP LLL+S          K+EIL+P+ A +   AEG DSAGE   V F  +YP LVTG  
Sbjct: 60  RPLLLLDSLPE-------KREILKPVRAAS---AEGGDSAGETK-VGFLGKYPWLVTGIL 108

Query: 114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLK 173
             MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW+VGLPKRAP++S +LK
Sbjct: 109 LLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILK 168

Query: 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233
           +LIPVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNA+ASQF+LGQ +P+TLWLSLA
Sbjct: 169 VLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLA 228

Query: 234 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALF 293
           PVV+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALF
Sbjct: 229 PVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALF 288

Query: 294 VCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           VC+PPAIIVEGPQL+KHG +DAI+KVGM KFISDLFWVGMFYHLYNQ+ 
Sbjct: 289 VCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLA 337

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1

 Score =  478 bits (1229), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/307 (76%), Positives = 268/307 (87%), Gaps = 16/307 (5%)

Query: 43  EGGNVIWGRQLRPALLL-------ESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE 95
           +GG ++WGRQLRPALLL       +   +P+   AG+++ LRP       PA  + ++GE
Sbjct: 51  DGGQLVWGRQLRPALLLPAAGGLLQPPTSPSSSQAGRRQALRP-------PA--AATSGE 101

Query: 96  AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV 155
           A P  F ++YPAL+TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHLLVGVVYCLV
Sbjct: 102 AKPAGFLEKYPALITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLV 161

Query: 156 SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAA 215
           SW VGLPKRAPI+S LLKLL PVA+CHALGHVTSNVSFA VAVSF HTIKALEPFFNAAA
Sbjct: 162 SWTVGLPKRAPINSTLLKLLFPVALCHALGHVTSNVSFATVAVSFAHTIKALEPFFNAAA 221

Query: 216 SQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           +QF+LGQQ+PL LWLSLAPVV+GVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKKAM
Sbjct: 222 TQFVLGQQVPLPLWLSLAPVVLGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAM 281

Query: 276 TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFY 335
           TDMDSTN+YAYISIIAL VCIPPA+I+EGPQL++HG +DAI+KVG+ KF+SDLF+VG+FY
Sbjct: 282 TDMDSTNVYAYISIIALIVCIPPAVIIEGPQLLQHGFNDAIAKVGLTKFVSDLFFVGLFY 341

Query: 336 HLYNQVC 342
           HLYNQV 
Sbjct: 342 HLYNQVA 348

Triose phosphate/phosphate translocator that may function in the export of photoassimilates from chloroplasts during the day.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/354 (69%), Positives = 275/354 (77%), Gaps = 22/354 (6%)

Query: 1   MESRVLSRATTTTTTISSLRRSP------------LENHQNVSFISLKPIGAVGEGGNVI 48
           MESRVL+   T       L R P            +        ++ KP+G +  G N+I
Sbjct: 1   MESRVLTGGATAIRGGLPLLRKPAAVMKFTTAAHAISRDFPAGAVTAKPVGPLIAGPNLI 60

Query: 49  WGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPAL 108
           WGRQLRPA+LLE+S         K+E ++P  A ASS + GS  +   A V FF++   L
Sbjct: 61  WGRQLRPAILLETSP--------KRESIKPCSAAASS-SAGSSDSSGDAKVGFFNK-ATL 110

Query: 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID 168
            TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID
Sbjct: 111 TTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPID 170

Query: 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTL 228
           S  LKLL PVA CHALGHVTSNVSFAAV VSFTHT+KALEPFFNAAASQFILGQQ+PL L
Sbjct: 171 STQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLAL 230

Query: 229 WLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYIS 288
           WLSLAPVV+GVSMASLTELSFNW GF SAMISNISFTYRSIYSKKAMTDMDSTN+YAYIS
Sbjct: 231 WLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDSTNVYAYIS 290

Query: 289 IIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           IIAL  C+PPAI +EGPQL++HG +DAI+KVG+ KF++DLFWVGMFYHLYNQV 
Sbjct: 291 IIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVA 344

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Solanum tuberosum (taxid: 4113)

>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1

 Score =  442 bits (1137), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/309 (74%), Positives = 268/309 (86%), Gaps = 8/309 (2%)

Query: 34  SLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSA 93
           ++K   AV +   ++WGRQLRPALLL ++  P+   A ++  L+P       PA  ++SA
Sbjct: 40  TVKCAAAVPDAAPIVWGRQLRPALLLPAALLPSLQPA-RRHTLQP-------PAAAAESA 91

Query: 94  GEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYC 153
           GEA  V F ++YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS+IHL+VGVVYC
Sbjct: 92  GEAKSVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYC 151

Query: 154 LVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNA 213
           L+SW+VGLPKRAPI+  LLKLL PVA+CH +GH+TSNVSFAAVAVSF HTIKALEPFF+A
Sbjct: 152 LISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSA 211

Query: 214 AASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKK 273
           AA+QFILGQQ+P +LWLSLAPVVIGVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKK
Sbjct: 212 AATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKK 271

Query: 274 AMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 333
           AMTDMDSTN+YAYISIIAL VCIPPA+I EGP+L++HG SDAI+KVG+ KF+SDLF VG+
Sbjct: 272 AMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGL 331

Query: 334 FYHLYNQVC 342
           FYHLYNQ+ 
Sbjct: 332 FYHLYNQIA 340

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Zea mays (taxid: 4577)

>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1

 Score =  210 bits (534), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/269 (42%), Positives = 165/269 (61%), Gaps = 11/269 (4%)

Query: 81  ATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF 140
           A  S P    D A  A      +    L  G +F  W+ LNV+FNI NK++ N +PYP+ 
Sbjct: 70  ADRSEPHPIGDDAAAAETKS--EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWL 127

Query: 141 VSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200
            S + L  G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSF
Sbjct: 128 TSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 187

Query: 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260
           TH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMIS
Sbjct: 188 THIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMIS 247

Query: 261 NISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISK 318
           N++F +R+I+SKK M    +   N YA +S+++L +  P AI VEGPQ+   G   A++ 
Sbjct: 248 NLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALAT 307

Query: 319 VGMVKFISDLFWV---GMFYHLYNQVCIL 344
           VG  +F+   +WV    +FYHLYNQV  +
Sbjct: 308 VG-PQFV---WWVVAQSVFYHLYNQVSYM 332

Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for pollen maturation and embryo sac development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
255536723	406	Triose phosphate/phosphate translocator,	0.957	0.825	0.836	1e-164
224077056	408	predicted protein [Populus trichocarpa]	0.954	0.818	0.815	1e-161
224125582	408	predicted protein [Populus trichocarpa]	0.96	0.823	0.822	1e-161
147834373	443	hypothetical protein VITISV_028555 [Viti	0.954	0.753	0.824	1e-159
225443598	406	PREDICTED: triose phosphate/phosphate tr	0.957	0.825	0.822	1e-159
356521410	429	PREDICTED: LOW QUALITY PROTEIN: triose p	0.951	0.776	0.790	1e-154
356548666	406	PREDICTED: triose phosphate/phosphate tr	0.948	0.817	0.797	1e-153
449433798	411	PREDICTED: triose phosphate/phosphate tr	0.957	0.815	0.772	1e-151
21593093	410	phosphate/triose-phosphate translocator	0.957	0.817	0.769	1e-148
145334749	415	Glucose-6-phosphate/phosphate translocat	0.957	0.807	0.766	1e-148

>gi|255536723|ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549327|gb|EEF50815.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 287/343 (83%), Positives = 310/343 (90%), Gaps = 8/343 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRATTT +++  LRR P+      SF+S+KPIG VGEGGN+IWGRQLRP+LLLE
Sbjct: 1   MESRVLSRATTTLSSLPHLRR-PMRESNTTSFVSMKPIGTVGEGGNLIWGRQLRPSLLLE 59

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA-APVRFFDRYPALVTGFFFFMWYF 119
           SS A       K+E LRP +A ASSPAEGSDS+G+  APV FF++YPALVTGFFFFMWYF
Sbjct: 60  SSPAT------KRENLRPTMAAASSPAEGSDSSGDKVAPVGFFEKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVVIGV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 299
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 293

Query: 300 IIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           II EGPQL+K+G +DAI+KVG  KFI+DLFWVGMFYHLYNQ+ 
Sbjct: 294 IIFEGPQLMKYGFNDAIAKVGTTKFITDLFWVGMFYHLYNQLA 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077056|ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|222848076|gb|EEE85623.1| predicted protein [Populus trichocarpa]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/346 (81%), Positives = 310/346 (89%), Gaps = 12/346 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVS--FISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRV S ATT    I+ +RR   E+H N S  FIS+KPIGAVGEGGN+IWGRQLRP+LL
Sbjct: 1   MESRVFSHATT----IAHVRRPLRESHSNTSCSFISIKPIGAVGEGGNLIWGRQLRPSLL 56

Query: 59  LESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFM 116
           LE+S+        +K+ILRP++A ASSPAEGSDS+G+   AP+ FF++ PALVTGFFFFM
Sbjct: 57  LEASSP----MNARKDILRPVMAAASSPAEGSDSSGDGKVAPIGFFEKNPALVTGFFFFM 112

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLI
Sbjct: 113 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNLLKLLI 172

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSL PVV
Sbjct: 173 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLLPVV 232

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI 296
           +GVSMASLTELSFNWTGFISAMISNISFTYRS+YSKKAMTDMDSTNIYAYISIIALFVCI
Sbjct: 233 LGVSMASLTELSFNWTGFISAMISNISFTYRSLYSKKAMTDMDSTNIYAYISIIALFVCI 292

Query: 297 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           PPAI+VEGPQLIKHG +DAI+KVG+ KFISDLFWVGMFYHLYNQ+ 
Sbjct: 293 PPAILVEGPQLIKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLA 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125582|ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1| predicted protein [Populus trichocarpa]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 283/344 (82%), Positives = 306/344 (88%), Gaps = 8/344 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRATT       LR S    + + SF+S+KPIGAV EGGN+IWG QLRP+LLLE
Sbjct: 1   MESRVLSRATTVAHVRRPLRES--NGNASCSFLSIKPIGAVSEGGNLIWGTQLRPSLLLE 58

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFMWY 118
           +S         +KEIL P++A ASSPAEGSDS+G+   APV FFD+YPALVTGFFFFMWY
Sbjct: 59  ASYP----VTARKEILWPVMAAASSPAEGSDSSGDGKVAPVGFFDKYPALVTGFFFFMWY 114

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAP+DS LLKLLIPV
Sbjct: 115 FLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLLIPV 174

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQ+P+TLWLSLAPVV+G
Sbjct: 175 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPVVLG 234

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP 298
           VS+ASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPP
Sbjct: 235 VSVASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPP 294

Query: 299 AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           AII+EGPQLIKHG SD I+KVG+ KFISDLFWVGMFYHLYNQ+ 
Sbjct: 295 AIILEGPQLIKHGFSDGIAKVGLTKFISDLFWVGMFYHLYNQLA 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834373|emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/342 (82%), Positives = 303/342 (88%), Gaps = 8/342 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS ATT    IS L R        V F   +PIGAVG+GGN+IWGRQLRPAL+LE
Sbjct: 1   MESRVLSGATT----ISGLVRLRKPVRDTVCFAPARPIGAVGDGGNLIWGRQLRPALILE 56

Query: 61  SSNAPA-GLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYF 119
           S  AP  G+  GK+EILRP +A+ SSPAEGSDSAG+A  + F D+YPALVTGFFFFMWYF
Sbjct: 57  S--APVVGMTTGKREILRPTMASTSSPAEGSDSAGDAK-IGFLDKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVV+GV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 299
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPPA
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPA 293

Query: 300 IIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341
           +IVEGPQL+KHG +DAI+KVG+ KF+SDLFWVGMFYHLYNQ+
Sbjct: 294 LIVEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQL 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443598|ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed protein product [Vitis vinifera]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/343 (82%), Positives = 303/343 (88%), Gaps = 8/343 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS ATT    IS L R        V F   +PIGAVG+GGN+IWGRQLRPAL+LE
Sbjct: 1   MESRVLSGATT----ISGLVRLRKPVRDTVCFAPARPIGAVGDGGNLIWGRQLRPALILE 56

Query: 61  SSNAPA-GLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYF 119
           S  AP  G+  GK+EILRP +A+ SSPAEGSDSAG+A  + F D+YPALVTGFFFFMWYF
Sbjct: 57  S--APVVGMTTGKREILRPTMASTSSPAEGSDSAGDAK-IGFLDKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVV+GV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA 299
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPPA
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPA 293

Query: 300 IIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           +IVEGPQL+KHG +DAI+KVG+ KF+SDLFWVGMFYHLYNQ+ 
Sbjct: 294 LIVEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLA 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521410|ref|XP_003529349.1| PREDICTED: LOW QUALITY PROTEIN: triose phosphate/phosphate translocator, chloroplastic-like [Glycine max]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/343 (79%), Positives = 299/343 (87%), Gaps = 10/343 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRA T ++ +  LR+ P E   + S +++K +G+V +GGN+IWGRQLRP L   
Sbjct: 1   MESRVLSRAGTLSS-LPHLRKPPREAVSSASLVAVKAVGSVADGGNLIWGRQLRPELC-- 57

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFMWY 118
                + +   +  +LRP LA ASSPAEGSDSAGEA  AP  FFD+YPALVTGFFFF WY
Sbjct: 58  -----SPVLKREAVLLRPCLAAASSPAEGSDSAGEAKVAPAGFFDKYPALVTGFFFFTWY 112

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGV YCLVSWAVGLPKRAPIDS LLKLLIPV
Sbjct: 113 FLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLIPV 172

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVVIG
Sbjct: 173 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIG 232

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP 298
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPP
Sbjct: 233 VSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPP 292

Query: 299 AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341
           A+I+EGP L+K+G +DAI+KVG+VKF+SDLFWVGMFYHLYNQV
Sbjct: 293 AVILEGPTLLKNGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQV 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548666|ref|XP_003542721.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Glycine max]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/346 (79%), Positives = 300/346 (86%), Gaps = 14/346 (4%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRA T  + +  LR+ P E     S +++K +G+V +GGN+IWGRQLRP L   
Sbjct: 1   MESRVLSRAGTLFS-LPHLRKLPREVGAGPSLVAVKAVGSVADGGNLIWGRQLRPELC-- 57

Query: 61  SSNAPAGLFAGKKE--ILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFM 116
              +PA     KKE  +LRP LA ASSPAEGSDSAGEA  AP  FF++YPALVTGFFFF 
Sbjct: 58  ---SPAL----KKEAVLLRPCLAAASSPAEGSDSAGEAKVAPAGFFEKYPALVTGFFFFT 110

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGV YCLVSWAVGLPKRAPIDS LLKLLI
Sbjct: 111 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLI 170

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVV
Sbjct: 171 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVV 230

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI 296
           IGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCI
Sbjct: 231 IGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCI 290

Query: 297 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           PPA+I+EGP L+KHG +DAI+KVG+VKF+SDLFWVGMFYHLYNQV 
Sbjct: 291 PPAVILEGPTLLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVA 336

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433798|ref|XP_004134684.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Cucumis sativus]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/348 (77%), Positives = 300/348 (86%), Gaps = 13/348 (3%)

Query: 1   MESRVLSRATTTTTTISSLR---RSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPAL 57
           MES  LSRAT+    I +LR   R    N  +V+F+  +PI    EG N+IWGRQLRP+L
Sbjct: 1   MESHFLSRATSFAGAIPTLRKLHRDVTSNSNHVAFVHTRPIA---EGANLIWGRQLRPSL 57

Query: 58  LLESSNAPAGLFAGKKEILRPILATASS-PAEGSDSAGEA--APVRFFDRYPALVTGFFF 114
           LL++ +    L +GK++ +RP  A ASS PA GSDSAG+A  APV FF++YPALVTGFFF
Sbjct: 58  LLDTPH----LVSGKRDTIRPTFAAASSSPAGGSDSAGDAKVAPVGFFEKYPALVTGFFF 113

Query: 115 FMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKL 174
           FMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL+VGVVYCL+SWAVGLPKRAPIDS LLKL
Sbjct: 114 FMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLVVGVVYCLISWAVGLPKRAPIDSTLLKL 173

Query: 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAP 234
           LIPVA CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAP
Sbjct: 174 LIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAP 233

Query: 235 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFV 294
           VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  
Sbjct: 234 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLF 293

Query: 295 CIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           CIPPA+IVEGPQL+K G +DAI+KVG+ KF+ DLFWVGMFYHLYNQ+ 
Sbjct: 294 CIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVLDLFWVGMFYHLYNQLA 341

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593093|gb|AAM65042.1| phosphate/triose-phosphate translocator precursor [Arabidopsis thaliana]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/347 (76%), Positives = 293/347 (84%), Gaps = 12/347 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFIS-----LKPIGAVGEGGNVIWGRQLRP 55
           MESRVL RAT     I  LRR     H+  S  S     +KPIG +GEG N+I GRQLRP
Sbjct: 1   MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query: 56  ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
            LLL+SS    G    K+EIL+P+ A A   AEG D+AGEA  V F  +YP LVTGFFFF
Sbjct: 61  ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGEAK-VGFLAKYPWLVTGFFFF 113

Query: 116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct: 114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query: 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct: 174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query: 236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 295
           V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC
Sbjct: 234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVC 293

Query: 296 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           IPPAIIVEGP+L+ HG +DAI+KVGM KFISDLFWVGMFYHLYNQ+ 
Sbjct: 294 IPPAIIVEGPKLLNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQLA 340

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334749|ref|NP_001078720.1| Glucose-6-phosphate/phosphate translocator-like protein [Arabidopsis thaliana] gi|332007958|gb|AED95341.1| Glucose-6-phosphate/phosphate translocator-like protein [Arabidopsis thaliana]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/347 (76%), Positives = 293/347 (84%), Gaps = 12/347 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFIS-----LKPIGAVGEGGNVIWGRQLRP 55
           MESRVL RAT     I  LRR     H+  S  S     +KPIG +GEG N+I GRQLRP
Sbjct: 1   MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query: 56  ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
            LLL+SS    G    K+EIL+P+ A A   AEG D+AG+A  V F  +YP LVTGFFFF
Sbjct: 61  ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGDAK-VGFLAKYPWLVTGFFFF 113

Query: 116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct: 114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query: 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct: 174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query: 236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 295
           V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC
Sbjct: 234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVC 293

Query: 296 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342
           IPPAIIVEGP+L+ HG +DAI+KVGM KFISDLFWVGMFYHLYNQ+ 
Sbjct: 294 IPPAIIVEGPKLLNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQLA 340

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2161423	415	APE2 "ACCLIMATION OF PHOTOSYNT	0.954	0.804	0.765	1.1e-135
TAIR|locus:2160175	388	GPT1 "glucose 6-phosphate/phos	0.728	0.657	0.436	4.9e-53
TAIR|locus:2036778	388	GPT2 "glucose-6-phosphate/phos	0.657	0.592	0.456	2.1e-52
TAIR|locus:2151381	417	AT5G17630 "AT5G17630" [Arabido	0.797	0.669	0.399	1.7e-50
UNIPROTKB|Q84QU8	407	PPT2 "Phosphoenolpyruvate/phos	0.668	0.574	0.409	1.5e-44
UNIPROTKB|Q69VR7	408	PPT1 "Phosphoenolpyruvate/phos	0.72	0.617	0.368	1.2e-42
TAIR|locus:2084203	383	PPT2 "phosphoenolpyruvate (pep	0.68	0.621	0.384	1.6e-40
TAIR|locus:2145944	408	CUE1 "CAB UNDEREXPRESSED 1" [A	0.902	0.774	0.312	1.6e-38
UNIPROTKB|Q5VQL3	393	PPT3 "Phosphoenolpyruvate/phos	0.737	0.656	0.358	1.9e-37
GENEDB_PFALCIPARUM|PFE0410w	342	PFE0410w "triose or hexose pho	0.682	0.698	0.328	4.1e-33

TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
 Identities = 265/346 (76%), Positives = 292/346 (84%)

Query:     1 MESRVLSRAXXXXXXISSLRRSPLENHQNVSF-----ISLKPIGAVGEGGNVIWGRQLRP 55
             MESRVL RA      I  LRR     H+  S       S+KPIG +GEG N+I GRQLRP
Sbjct:     1 MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query:    56 ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
              LLL+SS    G    K+EIL+P+ A A   AEG D+AG+A  V F  +YP LVTGFFFF
Sbjct:    61 ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGDAK-VGFLAKYPWLVTGFFFF 113

Query:   116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
             MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct:   114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query:   176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
             IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct:   174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query:   236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 295
             V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC
Sbjct:   234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVC 293

Query:   296 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341
             IPPAIIVEGP+L+ HG +DAI+KVGM KFISDLFWVGMFYHLYNQ+
Sbjct:   294 IPPAIIVEGPKLLNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQL 339

GO:0005215 "transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015717 "triose phosphate transport" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 116/266 (43%), Positives = 166/266 (62%)

Query:    81 ATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF 140
             A  S P    D A  AA  +  +    L  G +F  W+ LNV+FNI NK++ N +PYP+ 
Sbjct:    70 ADRSEPHPIGDDAA-AAETKS-EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWL 127

Query:   141 VSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200
              S + L  G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSF
Sbjct:   128 TSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 187

Query:   201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260
             TH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMIS
Sbjct:   188 THIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMIS 247

Query:   261 NISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISK 318
             N++F +R+I+SKK M    +   N YA +S+++L +  P AI VEGPQ+   G   A++ 
Sbjct:   248 NLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALAT 307

Query:   319 VGMVKFISDLFWV---GMFYHLYNQV 341
             VG  +F+   +WV    +FYHLYNQV
Sbjct:   308 VGP-QFV---WWVVAQSVFYHLYNQV 329

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007033 "vacuole organization" evidence=IMP

GO:0009553 "embryo sac development" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0034389 "lipid particle organization" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0009790 "embryo development" evidence=IMP

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 109/239 (45%), Positives = 156/239 (65%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G +F  W+ LNV+FNI NK++ N FPYP+  S + L  G +  LVSWA  +      
Sbjct:    95 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKT 154

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
             D +  K L PVAV H +GHV + VS + VAVSFTH IK+ EP F+   S+F +G+  PL 
Sbjct:   155 DLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLP 214

Query:   228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYA 285
             ++LSL P++ G ++A++TEL+FN TGF+ AMISN++F +R+I+SKK M    +   N YA
Sbjct:   215 VYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYA 274

Query:   286 YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV---GMFYHLYNQV 341
              +S+++L +  P +I VEGPQ+   G  +A+S+VG   F+   +WV    +FYHLYNQV
Sbjct:   275 CLSMMSLVILTPFSIAVEGPQMWAAGWQNAVSQVGP-NFV---WWVVAQSVFYHLYNQV 329

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007276 "gamete generation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0010109 "regulation of photosynthesis" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 117/293 (39%), Positives = 170/293 (58%)

Query:    54 RPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFF 113
             +P L L +  + +G F+ K   +  + ++ S+P E SD  GEA       +   L  G  
Sbjct:    60 KPLLSLTNPESSSG-FSRKPRSIAAVGSSDSNPDEKSD-LGEAEKKE--KKAKTLQLGIV 115

Query:   114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLK 173
             F +WYF N++FNI NK+  N FPYP+ ++   L  G ++ LV W+  L     I    + 
Sbjct:   116 FGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPKISKPFII 175

Query:   174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233
              L+  A+ H +GH+++ VSF+ VAVSFTH IK+ EP F+   S  +LG   PL +WLS+ 
Sbjct:   176 ALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSS-LLGDSYPLAVWLSIL 234

Query:   234 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT---DMDSTNIYAYISII 290
             P+V+G S+A++TE+SFN  G   AMISN+ F  R+IYSK+++    ++D  N+Y  ISI+
Sbjct:   235 PIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLRNIYSKRSLQSFKEIDGLNLYGCISIL 294

Query:   291 ALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV---GMFYHLYNQ 340
             +L    P AI VEG   +  G   AI+ VG        FWV   G+FYHLYNQ
Sbjct:   295 SLLYLFPVAIFVEGSHWVP-GYHKAIASVGTPSTF--YFWVLLSGVFYHLYNQ 344

GO:0005355 "glucose transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 100/244 (40%), Positives = 145/244 (59%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V  L  W  G+ +R  I
Sbjct:   105 LQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKI 164

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
                 L  ++P+AV H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG+ LP T
Sbjct:   165 SGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE-LP-T 222

Query:   228 LW--LSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDST 281
             +W  LSL P+V GV++ASLTE SFNW GF SAM SN++F  R++ SKK M      +D+ 
Sbjct:   223 VWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNI 282

Query:   282 NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341
             N+++ I++++ F+  P A + EG ++    L  A   V  V   S L    + +H Y QV
Sbjct:   283 NLFSIITVMSFFLLAPVAFLTEGIKITPTVLQSAGLNVKQVLTRSLL--AALCFHAYQQV 340

Query:   342 CILL 345
               ++
Sbjct:   341 SYMI 344

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 95/258 (36%), Positives = 144/258 (55%)

Query:    92 SAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVV 151
             +AGEA           L  G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V
Sbjct:    90 AAGEAGAEEGGGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTV 149

Query:   152 YCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFF 211
               L  W  G+ KR  I    L  ++P+A+ H +G++ +N+S   VAVSFTHTIKA+EPFF
Sbjct:   150 IALFMWITGILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFF 209

Query:   212 NAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYS 271
             +   S   LG+     + LSL P+V GV++ASLTE SFNW GF SAM SN++F  R++ S
Sbjct:   210 SVLLSALFLGEMPTPFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLS 269

Query:   272 KKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISD 327
             KK M      +D+  +++ I++++ F+  P  ++ EG ++    L  A   +  + +   
Sbjct:   270 KKLMVKKEESLDNITLFSIITVMSFFLLAPVTLLTEGVKVTPTVLQSAGLNLKQI-YTRS 328

Query:   328 LFWVGMFYHLYNQVCILL 345
             L      +H Y QV  ++
Sbjct:   329 LI-AAFCFHAYQQVSYMI 345

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 93/242 (38%), Positives = 138/242 (57%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G  F +WY LN+ +NI NK++   +PYP  V+   L  G +   + W + L  R   
Sbjct:    77 LKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKF 136

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
                   +++ +AV H LG++ +NVS   V VSFTHTIKA+EPFF    S  +LG+   L 
Sbjct:   137 SPSQFTVIVQLAVAHTLGNLLTNVSLGRVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLW 196

Query:   228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD---MDSTNIY 284
             +  SL P+V GVS+AS TE SFNW GF SAM SN++   R++ SKK M     +D+ N++
Sbjct:   197 IVCSLLPIVAGVSLASFTEASFNWIGFCSAMASNVTNQSRNVLSKKFMVGKDALDNINLF 256

Query:   285 AYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVK-FISDLFWVGMFYHLYNQVCI 343
             + I+II+  + +P AI+++G ++    L  A S+   VK F       G+  H Y QV  
Sbjct:   257 SIITIISFILLVPLAILIDGFKVTPSHLQVATSQGLSVKEFCIMSLLAGVCLHSYQQVSY 316

Query:   344 LL 345
             ++
Sbjct:   317 MI 318

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 105/336 (31%), Positives = 170/336 (50%)

Query:    18 SLRRSPLENHQNVSFISLKP-IGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEIL 76
             SLR  P+    + S +++ P + ++       W      + L   S  P+ +        
Sbjct:    22 SLRHHPITTAASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAWSGVPSPISHSLDTNR 81

Query:    77 RPILATA-SSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYF 135
                 ATA    AE  D++G+   V        L  G  F MWY  N+ FNI NK++    
Sbjct:    82 FRTAATAVPESAEEGDNSGKLTKV--------LELGLLFAMWYLFNIYFNIYNKQVLKAL 133

Query:   136 PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 195
               P  V+++   VG V   + W + L KR  I    L  ++P+AV H LG++ +N+S   
Sbjct:   134 HAPMTVTLVQFAVGSVLITIMWVLNLYKRPKISGAQLAAILPLAVVHTLGNLFTNMSLGK 193

Query:   196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTG 253
             V+VSFTHTIKA+EPFF+   S   LG++ P T W+  ++ P+V GV++AS++E+SFNW G
Sbjct:   194 VSVSFTHTIKAMEPFFSVLLSAMFLGEK-P-TPWVLGAIVPIVGGVALASISEVSFNWAG 251

Query:   254 FISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIK 309
             F SAM SN++   R++ SKK M      +D+  +++ I++++L +  P     EG +   
Sbjct:   252 FSSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLVLMAPVTFFTEGIKFTP 311

Query:   310 HGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILL 345
               +  A   V  + +   L    + +H Y QV  ++
Sbjct:   312 SYIQSAGVNVKQI-YTKSLI-AALCFHAYQQVSYMI 345

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009528 "plastid inner membrane" evidence=TAS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 95/265 (35%), Positives = 139/265 (52%)

Query:    44 GGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFD 103
             GG ++ G  L P  +         L +G + +   + A A +P    D+   A   R   
Sbjct:    32 GGGIVAGAAL-PLRVRGGQLMSLPLLSGGRAVTARV-AAAEAPLPADDADAAAGRERGAL 89

Query:   104 RYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPK 163
                A + G     WY LN+ FNI NK++    P+PY ++   L  G     + WA+ L  
Sbjct:    90 AETAQL-GAMIVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAFGSFVIFLMWALKLHP 148

Query:   164 RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQ 223
                I    L  + P+A  H LG V +N+S + VAVSFTHTIKA EPFF    S F LG+ 
Sbjct:   149 APRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGET 208

Query:   224 LPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MD 279
               L +  SL P+V GV++ASLTELSFNW GF SAM SN+ +  R++ SKK +      +D
Sbjct:   209 PSLLVLGSLVPIVGGVALASLTELSFNWIGFWSAMASNLLYQSRNVLSKKLLGGEEEALD 268

Query:   280 STNIYAYISIIALFVCIPPAIIVEG 304
               N+++ ++I++  + +P  +  EG
Sbjct:   269 DINLFSILTILSFLLSLPLMLFSEG 293

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 82/250 (32%), Positives = 133/250 (53%)

Query:   105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGL--- 161
             +  L     F  WY LNV++N+ NK+  N    P+F+S + L VG ++  + W  G+   
Sbjct:    40 FEKLKLALLFLTWYTLNVLYNVDNKKALNMVKLPWFISSMQLYVGWIFIFIYWISGMKKI 99

Query:   162 PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILG 221
             PK    D  +  +LI  +VCH   H  + ++ +A +VSFTH +KA EP F A  S  +L 
Sbjct:   100 PKIYSYDIFIRNILIQ-SVCHIFVHFGAVMAMSATSVSFTHVVKACEPVFTAIFSILLLK 158

Query:   222 QQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----- 276
             Q L +  +++L  +V GV  AS+ EL F W  F  A +SN   + RSIY+KK MT     
Sbjct:   159 QYLKINKYIALLIIVGGVVCASMKELHFTWIAFWCATLSNFGSSIRSIYAKKMMTQKSLI 218

Query:   277 --DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF 334
               +++++NIYA+I+II+  + +P  +  EG +     ++   +       I  +   GM+
Sbjct:   219 GENLNASNIYAFITIISALISLPLVLAFEGKETYNFLVNYQGTNYTFKDVIFKIILSGMW 278

Query:   335 YHLYNQVCIL 344
             Y+  N+V  +
Sbjct:   279 YYFNNEVAFM 288

GO:0008524 "glucose 6-phosphate:phosphate antiporter activity" evidence=ISS

GO:0020011 "apicoplast" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P11869	TPT_SPIOL	No assigned EC number	0.7312	0.9428	0.8168	N/A	no
Q9ZSR7	TPT_ARATH	No assigned EC number	0.7665	0.9571	0.8170	yes	no
P29463	TPT_SOLTU	No assigned EC number	0.6920	0.9485	0.8019	N/A	no
P52177	TPT1_BRAOB	No assigned EC number	0.7478	0.9428	0.8108	N/A	no
P21727	TPT_PEA	No assigned EC number	0.7658	0.9371	0.8159	N/A	no
P49131	TPT_FLAPR	No assigned EC number	0.7478	0.9628	0.8259	N/A	no
P49133	TPT_MAIZE	No assigned EC number	0.7411	0.86	0.7359	N/A	no
P49132	TPT_FLATR	No assigned EC number	0.7296	0.9571	0.8230	N/A	no
Q9FTT3	TPT_ORYSJ	No assigned EC number	0.7622	0.8314	0.6978	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0046015202 hypothetical protein (408 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	1e-113
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	6e-52
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	2e-13
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-05
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	6e-04

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score =  331 bits (851), Expect = e-113
 Identities = 144/237 (60%), Positives = 175/237 (73%), Gaps = 3/237 (1%)

Query: 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
           L TG  F +WYFLNV FNI NK++ N FPYPYF ++I L VG +YCL+SW+ GLPKR  I
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
            S LLKLL+PVA+ H +GHVTSNVS + VAVSFTHTIKA+EPFF+   S F LGQ+ P T
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYA 285
           LWLSL P+V GV++AS TELSFNW GF+SAMISNI+F  R+I+SKKAMT   +D TN+YA
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYA 180

Query: 286 YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQV 341
           YISI++LF+  PPA I EGP  + HG   AIS V + K  +      M F+H Y QV
Sbjct: 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV 237

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score =  175 bits (445), Expect = 6e-52
 Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 15/241 (6%)

Query: 114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDS--KL 171
           F  WY LNV++ + NK   N  P P+ +S + L VG ++ L+ WA G  K   I S    
Sbjct: 54  FLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLF 113

Query: 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLS 231
           LK  +P  +CH   H  + +S    AVSFTH +KA EP F A  S   L Q L L  +LS
Sbjct: 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLS 173

Query: 232 LAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD-------MDSTNIY 284
           L P+V GV++AS+ EL F W  F  AM+SN+  + RSI++KK M +       + ++NIY
Sbjct: 174 LIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIY 233

Query: 285 AYISIIALFVCIPPAIIVEGPQ----LIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340
             +++IA  + +P  +  EG +       +  +      G++  I  +F+ G++Y+LYN+
Sbjct: 234 MLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGII--IFKIFFSGVWYYLYNE 291

Query: 341 V 341
           V
Sbjct: 292 V 292

Length = 350

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 253 GFISAMISNISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQL 307
           GFI A+ ++  F  R I S+K +       ++   +  Y+S +A  V +P  +  EG +L
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 308 IKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLTCC 348
            K  L      +   +++  L   G+   LYN     L   
Sbjct: 61  GKFILK-FFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGR 100

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 43.7 bits (103), Expect = 6e-05
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 4/203 (1%)

Query: 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAP 166
            L+      +W  L  +  I  K          F + +  L+  +  L    +      P
Sbjct: 5   LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP 64

Query: 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA-ASQFILGQQLP 225
                L LL+   +  AL  +   ++    + S    I  L P F A  A   +LG++L 
Sbjct: 65  ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLS 124

Query: 226 LTLWLSLAPVVIGVSMASLTEL---SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN 282
           L   L +   + GV +  L        +  G + A+ + + +   +   K+       T 
Sbjct: 125 LLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTL 184

Query: 283 IYAYISIIALFVCIPPAIIVEGP 305
                 ++AL + +   +   G 
Sbjct: 185 ALLLQLLLALLLLLLFFLSGFGA 207

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 139 YFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 198
           YF     L+  ++  L       P +     +LL+LL+  A+   + +V   V+   + V
Sbjct: 19  YFAVFRRLIFALLLLLPLLRRRPPLK-----RLLRLLLLGALQIGVFYVLYFVAVKRLPV 73

Query: 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA-SLTELSFNWTGFISA 257
                +  L P +    S  +  ++    + L+    + G  +  S   LS N  G +  
Sbjct: 74  GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLG 133

Query: 258 MISNISFTYRSIYSKKAM 275
           + S ISF   ++  K+ +
Sbjct: 134 LGSGISFALGTVLYKRLV 151

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.87
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.83
PLN00411	358	nodulin MtN21 family protein; Provisional	99.78
PRK11272	292	putative DMT superfamily transporter inner membran	99.78
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.78
PRK11689	295	aromatic amino acid exporter; Provisional	99.76
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.74
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.71
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.68
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.66
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.66
PRK15430	296	putative chloramphenical resistance permease RarD;	99.64
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.6
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.56
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.53
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.44
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.25
KOG2765	416	consensus Predicted membrane protein [Function unk	99.18
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.18
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.12
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.05
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.99
KOG1580	337	consensus UDP-galactose transporter related protei	98.93
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.91
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.9
COG2510	140	Predicted membrane protein [Function unknown]	98.88
KOG1581	327	consensus UDP-galactose transporter related protei	98.85
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.7
COG2962	293	RarD Predicted permeases [General function predict	98.64
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.6
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.57
KOG1582	367	consensus UDP-galactose transporter related protei	98.47
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.38
PLN00411	358	nodulin MtN21 family protein; Provisional	98.38
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.34
PRK11272	292	putative DMT superfamily transporter inner membran	98.32
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
PRK11689	295	aromatic amino acid exporter; Provisional	98.28
KOG2766	336	consensus Predicted membrane protein [Function unk	98.07
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.07
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.97
PRK15430	296	putative chloramphenical resistance permease RarD;	97.96
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.93
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.84
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.8
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.79
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.58
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.58
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.48
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.32
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.24
PRK11431	105	multidrug efflux system protein; Provisional	97.21
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.2
COG2076	106	EmrE Membrane transporters of cations and cationic	97.09
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.84
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.4
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.18
PRK13499	345	rhamnose-proton symporter; Provisional	95.96
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.94
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.83
COG2962	293	RarD Predicted permeases [General function predict	95.65
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.65
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.65
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.47
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.04
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.14
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	93.66
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	92.51
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	91.77
KOG4510	346	consensus Permease of the drug/metabolite transpor	91.68
KOG1581	327	consensus UDP-galactose transporter related protei	90.11
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.18
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	86.57
PRK13499	345	rhamnose-proton symporter; Provisional	86.22
COG2510	140	Predicted membrane protein [Function unknown]	86.07
KOG2922	335	consensus Uncharacterized conserved protein [Funct	82.64
KOG1580	337	consensus UDP-galactose transporter related protei	82.18

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2e-33  Score=275.73  Aligned_cols=242  Identities=35%  Similarity=0.631  Sum_probs=207.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHH
Q 018824          106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHA  183 (350)
Q Consensus       106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~--~~~~~~ll~lgl~~~  183 (350)
                      +.+++..+++.||++|+.++++||++++++|+|++++++|++++.+++.+.|..+.++.++++  +++++.++|+|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999998877666765555545553  458899999999998


Q ss_pred             HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHH
Q 018824          184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS  263 (350)
Q Consensus       184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~  263 (350)
                      ..+...+.|+++++++++|++|+++|+|+++++++++|||++++++++++++++||.+++.+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            88888899999999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHhhhccC-------CCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhh---hhhhhchHHHHHHHHHHHH
Q 018824          264 FTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD---AISKVGMVKFISDLFWVGM  333 (350)
Q Consensus       264 ~A~~~Vl~kk~~~~-------l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~---~~~~~g~~~~~~~l~~sGl  333 (350)
                      +++|+++.||.+++       +++.+++.++++++.++++|+.+..|+++... .+.+   ...+.....+...++.+|+
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l  284 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence            99999999998853       56888888899999999999998788754322 2211   1111122234446778999


Q ss_pred             HHHHHHHHHHHHhhc
Q 018824          334 FYHLYNQVCILLTCC  348 (350)
Q Consensus       334 ~~~lyn~~sf~~l~~  348 (350)
                      +|++||+++|++++.
T Consensus       285 ~~~l~n~~~f~~l~~  299 (350)
T PTZ00343        285 WYYLYNEVAFYCLGK  299 (350)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-33  Score=270.99  Aligned_cols=237  Identities=38%  Similarity=0.561  Sum_probs=211.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHH
Q 018824          106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH  182 (350)
Q Consensus       106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~--~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i-~~~~~~~ll~lgl~~  182 (350)
                      +.+..+.++..|+++|+.+++.||++++  +|++|++++.+|.+++.+..+..|..+..+..+. ++.+++.++|+|+++
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            5778999999999999999999999999  8999999999999999998888887777766555 446899999999999


Q ss_pred             HHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 018824          183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  262 (350)
Q Consensus       183 ~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l  262 (350)
                      .++++++|.|+.+++|+++|++|+++|++++++++++.+|++++..++++++++.||.+++.+|.+||+.|++.++++++
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL  173 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH-HHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHH
Q 018824          263 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL  337 (350)
Q Consensus       263 ~~A~~~Vl~kk~~~----~l~~~~l~~~~~~~s~l~Ll-p~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~l  337 (350)
                      .+++++++.|+.++    ++|++++++|++++++++++ |+....|+... . ++.+.  .... .++..++.+ +++|+
T Consensus       174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~--~~~~-~~~~~~~~s-v~~f~  247 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTA--PWFV-TFLILLLNS-VLAFL  247 (316)
T ss_pred             HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeecc--ccch-hhHHHHHHH-HHHHH
Confidence            99999999999883    48999999999999999999 88888888776 3 33221  1111 344455555 99999


Q ss_pred             HHHHHHHHhhc
Q 018824          338 YNQVCILLTCC  348 (350)
Q Consensus       338 yn~~sf~~l~~  348 (350)
                      ||+++|+++|-
T Consensus       248 ~Nls~f~~ig~  258 (316)
T KOG1441|consen  248 LNLSAFLVIGR  258 (316)
T ss_pred             HHHHHHHHHcc
Confidence            99999999984

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=2.4e-31  Score=255.01  Aligned_cols=240  Identities=60%  Similarity=1.029  Sum_probs=202.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 018824          108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV  187 (350)
Q Consensus       108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~  187 (350)
                      +++..++.+||++|+.++++||+++++|++|+++++.|++++.+.+.+.|..+.+++++.++++++.+++.|++++.++.
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999988766655444455566788999999999999988999


Q ss_pred             HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 018824          188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR  267 (350)
Q Consensus       188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~  267 (350)
                      +.|.+++|+++++++++++++|+|+++++++++|||++++++.+++++++|+.+...+|.+++..|++++++++++|++|
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999887777778888999999999999999


Q ss_pred             HHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHH-HHHHHHHHHHHH
Q 018824          268 SIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG-MFYHLYNQVCIL  344 (350)
Q Consensus       268 ~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sG-l~~~lyn~~sf~  344 (350)
                      +++.||.++  ++|+.+++.|++.++.++++|++...|++....+.+.+.........++...+..+ .++++||+..|+
T Consensus       161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T TIGR00817       161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM  240 (302)
T ss_pred             HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999887  89999999999999999999998887876544333322111112223443343444 478899988887


Q ss_pred             Hhh
Q 018824          345 LTC  347 (350)
Q Consensus       345 ~l~  347 (350)
                      .+.
T Consensus       241 ~l~  243 (302)
T TIGR00817       241 LLG  243 (302)
T ss_pred             HHc
Confidence            765

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.87  E-value=3.2e-20  Score=176.26  Aligned_cols=234  Identities=18%  Similarity=0.271  Sum_probs=204.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 018824          111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT  188 (350)
Q Consensus       111 ~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~--~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~  188 (350)
                      ....+.|..+|+.+.+.||+++.+++||..+..  .|.+++.+.+.+....|+.+.++++++..|.++|+++++.+..++
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t   93 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT   93 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence            456667778899999999999999998887777  899999998877777788888889999999999999999999999


Q ss_pred             HHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 018824          189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS  268 (350)
Q Consensus       189 ~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~~  268 (350)
                      +..+++|+++++..++|..+|+++++.+.+|+|.+++...+.++....+|......+|.++|..|+.|++...++-+.+.
T Consensus        94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~  173 (314)
T KOG1444|consen   94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV  173 (314)
T ss_pred             ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018824          269 IYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLT  346 (350)
Q Consensus       269 Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~sf~~l  346 (350)
                      ++.||..+  +++...+++|.++.++..+....++.|..+  .  .....+......++..+.++|++.+..|.+++.|+
T Consensus       174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~--l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct  249 (314)
T KOG1444|consen  174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD--A--LSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCT  249 (314)
T ss_pred             HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH--H--HHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998763  578889999999999999988887776543  1  11111112234677889999999999999999987


Q ss_pred             hc
Q 018824          347 CC  348 (350)
Q Consensus       347 ~~  348 (350)
                      =-
T Consensus       250 ~~  251 (314)
T KOG1444|consen  250 RV  251 (314)
T ss_pred             hh
Confidence            43

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.83  E-value=6e-20  Score=172.85  Aligned_cols=203  Identities=20%  Similarity=0.301  Sum_probs=178.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH-HhcCC---CCCCCCh-HHHHHHHHHHH
Q 018824          106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLP---KRAPIDS-KLLKLLIPVAV  180 (350)
Q Consensus       106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~-~~~l~---~~~~i~~-~~~~~ll~lgl  180 (350)
                      +.+.+..++.+||++|++..+++|+.-.+|++|.+++.+|+++-.++..... ..+.+   ++.+.++ ++.+++.|.|+
T Consensus        13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal   92 (349)
T KOG1443|consen   13 NRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL   92 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh
Confidence            4566777889999999999999999999999999999999998887654322 22111   1223444 46788999999


Q ss_pred             HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHH
Q 018824          181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS  260 (350)
Q Consensus       181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S  260 (350)
                      ..++.+.++|+|++|+++++++|.|+..++|+.+++.+|.-||+++.-.+.++++.+|+.+.++.+.+||..|+.+.+++
T Consensus        93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~a  172 (349)
T KOG1443|consen   93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAA  172 (349)
T ss_pred             hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccC-----CCHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Q 018824          261 NISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQLI  308 (350)
Q Consensus       261 ~l~~A~~~Vl~kk~~~~-----l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~  308 (350)
                      .++.+++..+.+.++++     -+|....++.+++..+.++|..+.+||+...
T Consensus       173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~  225 (349)
T KOG1443|consen  173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLI  225 (349)
T ss_pred             HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccc
Confidence            99999999999988753     4688999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.78  E-value=1.1e-16  Score=157.83  Aligned_cols=216  Identities=11%  Similarity=0.070  Sum_probs=158.8

Q ss_pred             HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 018824          121 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV  198 (350)
Q Consensus       121 s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsv  198 (350)
                      ...+.++.|..++.--+|..+.++|+.++++++++. +..+. ++.++.+++++..++..|++......+.+.+++|+++
T Consensus        25 ~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa  104 (358)
T PLN00411         25 VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNP  104 (358)
T ss_pred             HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence            344567889999874458889999999998876543 22211 2223345667788888888775556678999999999


Q ss_pred             HHHHHHHhhhHHHHHHHHHHH------cCccCChhHHHHHHHHHHhhhhhcc-ccc-----------------------c
Q 018824          199 SFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASL-TEL-----------------------S  248 (350)
Q Consensus       199 s~~~iika~~Pifv~lls~lf------lkEr~t~~~ilsllliv~GV~l~~~-~e~-----------------------~  248 (350)
                      +.+.++.+++|+|++++++++      +|||+++++++|++++++|+.++.. ++.                       .
T Consensus       105 ~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  184 (358)
T PLN00411        105 TLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSN  184 (358)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCc
Confidence            999999999999999999999      6999999999999999999998653 111                       1


Q ss_pred             cc-HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH-HHHHHHHHHHHHHHHHHHHHhcCchhhh--cchhhhhhhhchHHH
Q 018824          249 FN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAYISIIALFVCIPPAIIVEGPQLIK--HGLSDAISKVGMVKF  324 (350)
Q Consensus       249 f~-~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~-~l~~~~~~~s~l~Llp~al~~Eg~~~~~--~~~~~~~~~~g~~~~  324 (350)
                      .+ ..|+.++++++++|++|+++.|+..+++++. ....|++.++.+.+.++++..|+.+...  ..+..    .....+
T Consensus       185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~i~  260 (358)
T PLN00411        185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI----TLITIV  260 (358)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch----HHHHHH
Confidence            13 4599999999999999999999988887654 5667777777777777777766532211  11111    112245


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 018824          325 ISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       325 ~~~l~~sGl~~~lyn~~  341 (350)
                      |.+++ ++++|.+||..
T Consensus       261 y~~i~-t~lay~lw~~~  276 (358)
T PLN00411        261 TMAII-TSVYYVIHSWT  276 (358)
T ss_pred             HHHHH-HHHHHHHHHHH
Confidence            55543 67788888765

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.78  E-value=3.3e-16  Score=149.89  Aligned_cols=221  Identities=15%  Similarity=0.127  Sum_probs=163.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHH
Q 018824          108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGH  186 (350)
Q Consensus       108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~-~l~~  186 (350)
                      +......++|....    ++.|...++.+ |..++++|+.++.+++++....+  ++...++++++.....|++. ...+
T Consensus        11 ~~~~~~~~iWg~~~----~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272         11 GALFALYIIWGSTY----LVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLR--GHPLPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHhhHH----HHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            34455666675533    67899998876 99999999999988765432222  21123466788788888765 3456


Q ss_pred             HHHHHHh-hhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHH
Q 018824          187 VTSNVSF-AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISF  264 (350)
Q Consensus       187 ~~~n~sl-~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~-e~~f~~~G~~lal~S~l~~  264 (350)
                      .+.+++. ++++++.+.++.++.|+++.+++++ +|||++++++.+++++++|+.++..+ +.+.+..|++++++++++|
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~  162 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW  162 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence            6778888 8999999999999999999999986 69999999999999999999987643 3445678999999999999


Q ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 018824          265 TYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC  342 (350)
Q Consensus       265 A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~s  342 (350)
                      +.+++..||..++ ++.....++..++..++.++....|.+....++..+     -....+.+++.+++.|.+||...
T Consensus       163 a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~i~~s~~~~~l~~~~~  234 (292)
T PRK11272        163 AFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSG-----FLALGYLAVFGSIIAISAYMYLL  234 (292)
T ss_pred             HHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999997543 455667788888888888887654432211111111     11356677777888888888654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.78  E-value=1.4e-16  Score=148.54  Aligned_cols=203  Identities=15%  Similarity=0.119  Sum_probs=157.2

Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhcchHHHHHH
Q 018824          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTHTI  204 (350)
Q Consensus       126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~-~~l~~~~~n~sl~~vsvs~~~ii  204 (350)
                      +..|+.+++...|..+.+.|++++.+++.+....+      .++++++..+..+.+ +.++..+.+.|+++++++.+.++
T Consensus         6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii   79 (260)
T TIGR00950         6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL   79 (260)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence            57899988755699999999998888765543322      234556666666654 56677888999999999999999


Q ss_pred             HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCH--H
Q 018824          205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS--T  281 (350)
Q Consensus       205 ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e-~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~--~  281 (350)
                      .+++|+++.+++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.++++.||..++.++  .
T Consensus        80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~  159 (260)
T TIGR00950        80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL  159 (260)
T ss_pred             HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence            999999999999999999999999999999999999875433 4456789999999999999999999998877774  4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824          282 NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       282 ~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~  341 (350)
                      ....+.+.++.++++|.....+.....  ...+     -...++.+++.++++|.+|+..
T Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~a  212 (260)
T TIGR00950       160 QFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQ-----WGALLYLGLIGTALAYFLWNKG  212 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCc--chHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            555577888999998887765432211  1111     1124666777788888888865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.76  E-value=3.6e-16  Score=149.91  Aligned_cols=215  Identities=13%  Similarity=0.138  Sum_probs=146.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHH
Q 018824          107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGH  186 (350)
Q Consensus       107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~  186 (350)
                      .+.....+++|... .   +..|..++++| |..+.++|+.++.+++.+..  +.++   .++++++.++..++.+...+
T Consensus         6 ~l~~l~a~~~Wg~~-~---~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~   75 (295)
T PRK11689          6 TLIGLIAILLWSTM-V---GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYE   75 (295)
T ss_pred             hHHHHHHHHHHHHH-H---HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHH
Confidence            34445666777543 3   67899999997 99999999999988765432  1122   22222333444444444556


Q ss_pred             HHHHHHhhh----cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc-----------ccH
Q 018824          187 VTSNVSFAA----VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS-----------FNW  251 (350)
Q Consensus       187 ~~~n~sl~~----vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~-----------f~~  251 (350)
                      .+.+.++++    +++..+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++.+           .+.
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~  155 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP  155 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence            666666654    57777889999999999999999999999999999999999999987654321           235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHH
Q 018824          252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV  331 (350)
Q Consensus       252 ~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~s  331 (350)
                      .|++++++++++|+.|+++.||..++.++.....   ..+.+.+.+.....|.+.. ...++.    . ...++.+ +.+
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~-~~~~~~----~-~~l~~~~-~~t  225 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAM-VFSLPA----I-IKLLLAA-AAM  225 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccc-cCCHHH----H-HHHHHHH-HHH
Confidence            6999999999999999999999887888776432   2333444444333332211 111111    1 1234444 468


Q ss_pred             HHHHHHHHHH
Q 018824          332 GMFYHLYNQV  341 (350)
Q Consensus       332 Gl~~~lyn~~  341 (350)
                      +++|.+||..
T Consensus       226 ~~~~~l~~~a  235 (295)
T PRK11689        226 GFGYAAWNVG  235 (295)
T ss_pred             HHHHHHHHHH
Confidence            8899999875

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.74  E-value=1.3e-15  Score=146.27  Aligned_cols=221  Identities=13%  Similarity=0.252  Sum_probs=152.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH-H
Q 018824          107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHAL-G  185 (350)
Q Consensus       107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l-~  185 (350)
                      .+......++|....    +..|..+++++ |..+.++|+.++.+.++...  . ++  +.+   ++.++..+++... .
T Consensus         6 ~l~~l~~~~~Wg~~~----~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~--~-~~--~~~---~~~~~~~g~~~~~~~   72 (299)
T PRK11453          6 GVLALLVVVVWGLNF----VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV--A-RP--KVP---LNLLLGYGLTISFGQ   72 (299)
T ss_pred             HHHHHHHHHHHhhhH----HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh--c-CC--CCc---hHHHHHHHHHHHHHH
Confidence            344556677776543    56799998887 99999999999776544322  1 11  111   3344555554333 3


Q ss_pred             HHHHHHHhhh-cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHH
Q 018824          186 HVTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISN  261 (350)
Q Consensus       186 ~~~~n~sl~~-vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e---~~f~~~G~~lal~S~  261 (350)
                      ..+.+.++++ ++++.+.++.++.|+++.+++++++|||++.+++.+++++++|+.++..++   .+.++.|+.++++++
T Consensus        73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aa  152 (299)
T PRK11453         73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAA  152 (299)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHH
Confidence            3455678887 688999999999999999999999999999999999999999999876442   223467999999999


Q ss_pred             HHHHHHHHHHhhhccCCC---HHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc-hHHHHHHHHHHHHHHHH
Q 018824          262 ISFTYRSIYSKKAMTDMD---STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKFISDLFWVGMFYHL  337 (350)
Q Consensus       262 l~~A~~~Vl~kk~~~~l~---~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g-~~~~~~~l~~sGl~~~l  337 (350)
                      ++|+.|+++.||..++.+   ......+++.++.+.+.......|++....+.+.. .+-.. ...+|.+++.+++.|.+
T Consensus       153 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~i~~t~~~~~l  231 (299)
T PRK11453        153 FSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT-IDMTTILSLMYLAFVATIVGYGI  231 (299)
T ss_pred             HHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc-CCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999765433   33445566666655555555555654321111110 00011 23577888889999999


Q ss_pred             HHHH
Q 018824          338 YNQV  341 (350)
Q Consensus       338 yn~~  341 (350)
                      |+..
T Consensus       232 ~~~~  235 (299)
T PRK11453        232 WGTL  235 (299)
T ss_pred             HHHH
Confidence            9863

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.71  E-value=7.7e-15  Score=140.58  Aligned_cols=198  Identities=14%  Similarity=0.122  Sum_probs=148.1

Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHH
Q 018824          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK  205 (350)
Q Consensus       126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iik  205 (350)
                      .+.|+++++++ |..+.++|++++.+++++....   ++.+.++++++..+..|++......+.++++++++++.+.++.
T Consensus        29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~  104 (293)
T PRK10532         29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKP---WRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE  104 (293)
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhH---HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            47899999987 9999999999998876544321   1123456778888888888777777888999999999999999


Q ss_pred             hhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 018824          206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN  282 (350)
Q Consensus       206 a~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~--e-~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~  282 (350)
                      .+.|+++.+++    +|++...  ..+.++++|+.++...  + .+.+..|++++++++++|+.|.++.||..++.++..
T Consensus       105 ~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~  178 (293)
T PRK10532        105 FTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPAT  178 (293)
T ss_pred             HHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence            99999998876    3665544  4566788999886532  2 234578999999999999999999999988888877


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824          283 IYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       283 l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~  341 (350)
                      . .++..++.+++.|+....++ .... ++.     .-...++.+++.+.+.|.+||..
T Consensus       179 ~-~~~~~~~~~~l~~~~~~~~~-~~~~-~~~-----~~~~~l~lgv~~t~~~~~l~~~~  229 (293)
T PRK10532        179 V-AIGSLIAALIFVPIGALQAG-EALW-HWS-----ILPLGLAVAILSTALPYSLEMIA  229 (293)
T ss_pred             H-HHHHHHHHHHHHHHHHHccC-cccC-CHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            6 46667788888888765433 1111 111     10124688888899999998865

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.68  E-value=3.5e-14  Score=136.77  Aligned_cols=177  Identities=19%  Similarity=0.302  Sum_probs=145.7

Q ss_pred             HHHHHHHHHhc--C-CcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 018824          124 FNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF  200 (350)
Q Consensus       124 ~~i~nK~il~~--f-p~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~  200 (350)
                      ..+..+.+...  . ++|+++++.|+++..+.........  +.++.++..++..++.++++.++..++|.|++|++.+.
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence            34555666553  2 3699999999999888655432211  11223445678889999999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc----cc------HHHHHHHHHHHHHHHHHHHH
Q 018824          201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS----FN------WTGFISAMISNISFTYRSIY  270 (350)
Q Consensus       201 ~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~----f~------~~G~~lal~S~l~~A~~~Vl  270 (350)
                      .+++|++.|+++++++++++|+|++++++++++++++|+++...+|.+    .+      ..|+++.+++.++.+++.++
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~  172 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY  172 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998765421    11      23999999999999999999


Q ss_pred             Hhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824          271 SKKAMT--DMDSTNIYAYISIIALFVCIPPAIIV  302 (350)
Q Consensus       271 ~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~  302 (350)
                      ++|..+  +.++.+.++|.+.++.++.++.....
T Consensus       173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l  206 (303)
T PF08449_consen  173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLL  206 (303)
T ss_pred             HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999885  56889999999999999998888774

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=99.66  E-value=8.4e-14  Score=130.45  Aligned_cols=158  Identities=12%  Similarity=0.082  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCC-----CCCCChHH-HHHHHHHHHH
Q 018824          109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKL-LKLLIPVAVC  181 (350)
Q Consensus       109 ~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~-----~~~i~~~~-~~~ll~lgl~  181 (350)
                      .......+|....    ++.|+ .++.+ |..+.++|++++.+++.+. ...+.++     .++.++++ +..+...+++
T Consensus         6 ~~i~a~~~wg~~~----~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         6 VSLLASFLFGYMY----YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             HHHHHHHHHHHHH----HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            3445556675544    56788 45565 9999999999998765432 2222111     01111222 3345666777


Q ss_pred             HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 018824          182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN  261 (350)
Q Consensus       182 ~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~  261 (350)
                      ...+..+.++|+++++++.++++.+++|+|+++++++++|||++++++++++++++|+.++..++.+.+    .++++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa  155 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLA  155 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHH
Confidence            777888999999999999999999999999999999999999999999999999999998754322222    3578899


Q ss_pred             HHHHHHHHHHhhhcc
Q 018824          262 ISFTYRSIYSKKAMT  276 (350)
Q Consensus       262 l~~A~~~Vl~kk~~~  276 (350)
                      ++|+.|.+..||..+
T Consensus       156 ~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       156 FSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHHHHHHHHhhcCC
Confidence            999999999998753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.66  E-value=4.1e-14  Score=137.92  Aligned_cols=207  Identities=9%  Similarity=0.059  Sum_probs=156.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCChHHHHHHHHHHHHHH
Q 018824          107 ALVTGFFFFMWYFLNVIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLP--KRAPIDSKLLKLLIPVAVCHA  183 (350)
Q Consensus       107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~-fp~P~~lt~~r~~ia~l~ll~~~~~~l~--~~~~i~~~~~~~ll~lgl~~~  183 (350)
                      .+...++.=+--.++...+..+.++-++ +..|.+-+++..+.-.++.......+..  +..+.-+++|.+.+.+|++-.
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv   90 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV   90 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH
Confidence            3333333333334455566677766664 6668887777665544432222221211  111222345556677899999


Q ss_pred             HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc---------ccHHHH
Q 018824          184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS---------FNWTGF  254 (350)
Q Consensus       184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~---------f~~~G~  254 (350)
                      .++++.+.|++|++++..+++..+.-+|+++++++++|+|+++.+++|++++++|++++...|..         ....|+
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GD  170 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGD  170 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhH
Confidence            99999999999999999999999999999999999999999999999999999999987765521         137899


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchh
Q 018824          255 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLS  313 (350)
Q Consensus       255 ~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~  313 (350)
                      +++++++++||+++|+.++..++.+..+...+..+++.++..+.....|..++-.-.|.
T Consensus       171 ll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~  229 (334)
T PF06027_consen  171 LLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT  229 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC
Confidence            99999999999999999999999999999999999999999999888887776544453

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.64  E-value=1.9e-13  Score=131.08  Aligned_cols=177  Identities=16%  Similarity=0.143  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CC-ChHHHHHHHHHHHHHHH
Q 018824          109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA---PI-DSKLLKLLIPVAVCHAL  184 (350)
Q Consensus       109 ~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~---~i-~~~~~~~ll~lgl~~~l  184 (350)
                      ......++|....    ++.|.. ++.+ |..+.++|++++.+++.+....+.+.+.   +. +++++......++....
T Consensus        12 ~~l~a~~~wg~~~----~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (296)
T PRK15430         12 LALAAYFIWGIAP----AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGG   85 (296)
T ss_pred             HHHHHHHHHHHHH----HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence            3444455564443    455875 5576 9999999999998765443321111100   01 23333333333444566


Q ss_pred             HHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHH
Q 018824          185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISF  264 (350)
Q Consensus       185 ~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~  264 (350)
                      ++.+.++++++++++.+.++.++.|+++++++++++|||++++++.+++++++|+.++...+.+.+    .++++++++|
T Consensus        86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~  161 (296)
T PRK15430         86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSF  161 (296)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHH
Confidence            788999999999999999999999999999999999999999999999999999998764322222    4578889999


Q ss_pred             HHHHHHHhhhccC--CCHHHHHHHHHHHHHHHH
Q 018824          265 TYRSIYSKKAMTD--MDSTNIYAYISIIALFVC  295 (350)
Q Consensus       265 A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~L  295 (350)
                      +.|.++.||..++  .+......|+.+.+.+..
T Consensus       162 a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~  194 (296)
T PRK15430        162 AFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL  194 (296)
T ss_pred             HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            9999999987532  233444455555555443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=1.6e-15  Score=141.27  Aligned_cols=231  Identities=19%  Similarity=0.295  Sum_probs=185.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHHHHHH-HHh-cCC---CCC--CCChHHHHHHH
Q 018824          108 LVTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVS-WAV-GLP---KRA--PIDSKLLKLLI  176 (350)
Q Consensus       108 l~~~~~~~~W~~~s~~~~i~nK~il~~----fp~P~~lt~~r~~ia~l~ll~~-~~~-~l~---~~~--~i~~~~~~~ll  176 (350)
                      .+...-...++.+++.+.+.||++++.    ..-|.+++..|.++...+++.+ +.. +.+   ..+  +++-+..+.++
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl  106 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL  106 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence            345556666778899999999999985    4579999999999998877543 221 111   112  35556778899


Q ss_pred             HHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc---ccccHHH
Q 018824          177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTG  253 (350)
Q Consensus       177 ~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e---~~f~~~G  253 (350)
                      |+++.+.+.+.+.|.+++|++++|+++-++++-+|+++++++++|+|-+.....+.++++.|-.+-+..|   ..+++.|
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999987766555   3567999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHhcC-chhhhcchhhhhhhhchHHHHHHHHH
Q 018824          254 FISAMISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAIIVEG-PQLIKHGLSDAISKVGMVKFISDLFW  330 (350)
Q Consensus       254 ~~lal~S~l~~A~~~Vl~kk~~~~l~--~~~l~~~~~~~s~l~Llp~al~~Eg-~~~~~~~~~~~~~~~g~~~~~~~l~~  330 (350)
                      .++++.|.++-|+..++.||.....+  -+.+.+|++..++++.+|..++... ...+.  +    ......+||..+.+
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~----~~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--F----PHLPAIKFWILMTL  260 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--c----ccchHHHHHHHHHH
Confidence            99999999999999999998775543  4689999999999999999777532 22222  1    12334589999999


Q ss_pred             HHHHHHHHHHHHHH
Q 018824          331 VGMFYHLYNQVCIL  344 (350)
Q Consensus       331 sGl~~~lyn~~sf~  344 (350)
                      +|++.+..|.+.+.
T Consensus       261 sglfgF~mgyvTg~  274 (347)
T KOG1442|consen  261 SGLFGFAMGYVTGW  274 (347)
T ss_pred             HHHHHHHhhheeeE
Confidence            99999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.56  E-value=1.5e-12  Score=123.83  Aligned_cols=209  Identities=14%  Similarity=0.115  Sum_probs=133.7

Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 018824          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH  202 (350)
Q Consensus       125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~--l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~  202 (350)
                      ++.+|...++- ++.  ..++...+.+.+.+....+  ..+.++.+++.+...+..++.....+.+.+.++++.+++...
T Consensus        17 ~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~   93 (281)
T TIGR03340        17 NLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVY   93 (281)
T ss_pred             HHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Confidence            45678666652 232  3555555555444332211  111122234444445555556677788889999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-cccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 018824          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNISFTYRSIYSKKAMTDMDST  281 (350)
Q Consensus       203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~  281 (350)
                      .+.+++|+++++++++++|||+++++++|+++++.|+.++..++. +.+..|+.++++++++|+.|+++.|+..++.++.
T Consensus        94 ~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~  173 (281)
T TIGR03340        94 PLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAF  173 (281)
T ss_pred             hHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcc
Confidence            999999999999999999999999999999999999998765432 3456788899999999999999999875555443


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHh---cCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 018824          282 NIYAYISIIALFVC-IPPAIIV---EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC  342 (350)
Q Consensus       282 ~l~~~~~~~s~l~L-lp~al~~---Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~s  342 (350)
                      ....+...++.+.. .|+.+..   +......   .   ........+...+.+++.|.+|+...
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~s~l~~~l~~~al  232 (281)
T TIGR03340       174 YSALGYLGIGFLAMGWPFLLLYLKRHGRSMFP---Y---ARQILPSATLGGLMIGGAYALVLWAM  232 (281)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhccchhh---h---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21111122222222 3332221   2111101   0   01112346667777888888888653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.53  E-value=2.4e-11  Score=113.61  Aligned_cols=207  Identities=16%  Similarity=0.162  Sum_probs=136.1

Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHH
Q 018824          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK  205 (350)
Q Consensus       126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iik  205 (350)
                      ...|...++...+......|+.++.+........+.....+..++.+...+..++.......+.+.++++++++.++++.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  103 (292)
T COG0697          24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII  103 (292)
T ss_pred             HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence            45566666533355666669988887633222211111111111222334444445566778889999999999999999


Q ss_pred             hhhHHHHHHHHH-HHcCccCChhHHHHHHHHHHhhhhhcccccccc---HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 018824          206 ALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNISFTYRSIYSKKAMTDMDST  281 (350)
Q Consensus       206 a~~Pifv~lls~-lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~---~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~  281 (350)
                      ++.|+++.+++. +++|||++++++.+++.++.|+.++...+...+   ..|+.+++.++++++.+.++.|+.. +.++.
T Consensus       104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~  182 (292)
T COG0697         104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPV  182 (292)
T ss_pred             HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChH
Confidence            999999999997 777999999999999999999999887665432   5899999999999999999999987 66776


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824          282 NIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       282 ~l~~-~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~  341 (350)
                      .... ++.........+... .+.+  .+..+.+.     ....+.+++.+++.+.+|+..
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-----~~~~~~g~~~~~i~~~~~~~~  235 (292)
T COG0697         183 TLALLLQLLLALLLLLLFFL-SGFG--APILSRAW-----LLLLYLGVFSTGLAYLLWYYA  235 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence            6665 444422222223222 1222  11111111     224556666677777777654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.44  E-value=1.3e-12  Score=118.89  Aligned_cols=222  Identities=17%  Similarity=0.213  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018824          114 FFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV  191 (350)
Q Consensus       114 ~~~W~~~s~~~~i~nK~il~~--fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~  191 (350)
                      ++.|.+.++.+++.||++++.  |+--+.+.+.|-.++.+.+.+....|+.+   ++.++.|.++|++++.+.-+..+.-
T Consensus        11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~SK   87 (309)
T COG5070          11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTSSK   87 (309)
T ss_pred             HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhccc
Confidence            455667889999999999985  66567788889998888666555444333   2345677889999998888888899


Q ss_pred             HhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--------cccHHHHHHHHHHHHH
Q 018824          192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIS  263 (350)
Q Consensus       192 sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--------~f~~~G~~lal~S~l~  263 (350)
                      +++|.+++.+++.|.++.+.++..+.+++|.|.+.....+.++.+.--..+.++|.        .+| .|++|+....++
T Consensus        88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls  166 (309)
T COG5070          88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS  166 (309)
T ss_pred             ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence            99999999999999999999999999999999999999999999999888888886        344 599999999999


Q ss_pred             HHHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824          264 FTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       264 ~A~~~Vl~kk~~--~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~  341 (350)
                      .+.+....||..  .+....+-++|...++..+++.+.+++|....  .+..+.+    .......++.+|++.+.-..+
T Consensus       167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~--~n~annl----~~d~l~am~ISgl~svgiSy~  240 (309)
T COG5070         167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSP--GNLANNL----SVDSLMAMFISGLCSVGISYC  240 (309)
T ss_pred             HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCc--chhhcCC----ChHHHHHHHHHHHHHhhhhhc
Confidence            999988888754  35567788899999999999999999886442  2222211    113345678899988877666


Q ss_pred             HHHH
Q 018824          342 CILL  345 (350)
Q Consensus       342 sf~~  345 (350)
                      +=+|
T Consensus       241 saWc  244 (309)
T COG5070         241 SAWC  244 (309)
T ss_pred             ccee
Confidence            5443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.25  E-value=1.3e-10  Score=95.40  Aligned_cols=117  Identities=16%  Similarity=0.299  Sum_probs=97.1

Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhcchHHHH
Q 018824          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTH  202 (350)
Q Consensus       125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l~~~~~i~~~~~~~ll~lgl~-~~l~~~~~n~sl~~vsvs~~~  202 (350)
                      .+++|...++++ |....++|+.++.+ +.+ ....+..+..+.+++++...+..+++ ...+..+.+.++++.+++..+
T Consensus         7 ~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~   84 (126)
T PF00892_consen    7 SVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS   84 (126)
T ss_pred             HHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence            467899999876 99999999999986 432 22222122245566778888888887 467889999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      ++..++|+++.+++++++||+++++++.++++++.|+.++.
T Consensus        85 ~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   85 ILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.18  E-value=5.5e-10  Score=108.47  Aligned_cols=171  Identities=18%  Similarity=0.238  Sum_probs=129.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-----
Q 018824          173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----  247 (350)
Q Consensus       173 ~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-----  247 (350)
                      +..+..+.+..+.++++|.|+.+++++..+++.++.-+|+..++.+|..||+++.|.+++++.++||++++.+|.     
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~  239 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence            445666667778899999999999999999999999999999999999999999999999999999999887743     


Q ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc
Q 018824          248 ---SFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG  320 (350)
Q Consensus       248 ---~f~~~G~~lal~S~l~~A~~~Vl~kk~~~----~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g  320 (350)
                         +-...|.++++++++.||.|.++.||...    ++|--.+..|..++.++++.|..++.+....  +.+.-+-+...
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~--e~F~lP~~~q~  317 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE--ERFELPSSTQF  317 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc--CcccCCCCcee
Confidence               12378999999999999999999999773    4677778899999999999988777643211  11110100011


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH
Q 018824          321 MVKFISDLFWVGMFYHLYNQVCILL  345 (350)
Q Consensus       321 ~~~~~~~l~~sGl~~~lyn~~sf~~  345 (350)
                      ...+..+++-+=+.=|+|-...+|+
T Consensus       318 ~~vv~~~ligtvvSDylW~~a~~lT  342 (416)
T KOG2765|consen  318 SLVVFNNLIGTVVSDYLWAKAVLLT  342 (416)
T ss_pred             EeeeHhhHHHHHHHHHHHHHHHHhc
Confidence            1123334444555666666666554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.18  E-value=3.6e-09  Score=99.38  Aligned_cols=140  Identities=16%  Similarity=0.230  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--
Q 018824          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--  247 (350)
Q Consensus       170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--  247 (350)
                      ++.......+++|.+.+.+.+.++++++++.+|+++.+..+++++++++++|+|++.++|.++++.++|+.+...++.  
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            455567777888999988999999999999999999999999999999999999999999999999999998754221  


Q ss_pred             -------cc--------cHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhcCchhhh
Q 018824          248 -------SF--------NWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIK  309 (350)
Q Consensus       248 -------~f--------~~~G~~lal~S~l~~A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~  309 (350)
                             +.        ...|+++.+++.++.++..|+.+|.+|+  .+.+......+.+|.++.++.....|+.+..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~  173 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE  173 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence                   11        2589999999999999999999999865  45556666667788888777766655544433

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.12  E-value=1.2e-08  Score=97.93  Aligned_cols=165  Identities=18%  Similarity=0.187  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCC-hHHHHHHHHHHHHHHHHHHH
Q 018824          111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPID-SKLLKLLIPVAVCHALGHVT  188 (350)
Q Consensus       111 ~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~~~i~-~~~~~~ll~lgl~~~l~~~~  188 (350)
                      .+-+++|+....    ..|++. .++.++.+   |..++.+++... ...+.   ++.+ ++.+..-+.-|++...++.+
T Consensus         7 lia~~~wGs~g~----~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~   75 (290)
T TIGR00776         7 LIPALFWGSFVL----INVKIG-GGPYSQTL---GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQIN   75 (290)
T ss_pred             HHHHHHHhhhHH----HHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhh
Confidence            445666766543    446554 45533332   677777754322 22221   1122 33344445556667788899


Q ss_pred             HHHHhhhcchHHHHHHHh-hhHHHHHHHHHHHcCccCChhH----HHHHHHHHHhhhhhcccccc-------cc-HHHHH
Q 018824          189 SNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFI  255 (350)
Q Consensus       189 ~n~sl~~vsvs~~~iika-~~Pifv~lls~lflkEr~t~~~----ilsllliv~GV~l~~~~e~~-------f~-~~G~~  255 (350)
                      ...++++++++.+..+.+ +.|+++.+.+.+++||+.+.++    +++++++++|+.+....+.+       .+ ..|.+
T Consensus        76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~  155 (290)
T TIGR00776        76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL  155 (290)
T ss_pred             HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence            999999999999988877 8889999999999999999999    99999999999987543211       34 68999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHH
Q 018824          256 SAMISNISFTYRSIYSKKAMTDMDSTNIYAYIS  288 (350)
Q Consensus       256 lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~  288 (350)
                      ++++|.++|+.|.+..|+.  ++||.+....+.
T Consensus       156 ~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~  186 (290)
T TIGR00776       156 LLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQA  186 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHc--CCCcceehhHHH
Confidence            9999999999999999986  478887744443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.05  E-value=5.2e-11  Score=111.04  Aligned_cols=188  Identities=15%  Similarity=0.112  Sum_probs=133.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 018824          110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS  189 (350)
Q Consensus       110 ~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~  189 (350)
                      +....+. |++|..+.+..|...+   .|..+.-.|+++-.+...++........ --++...++++.-|+..+.+.+..
T Consensus        40 l~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~~LiLRg~mG~tgvmlm  114 (346)
T KOG4510|consen   40 LLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRKWLILRGFMGFTGVMLM  114 (346)
T ss_pred             ceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEEEEEeehhhhhhHHHHH
Confidence            3334444 4556666666665544   4888888886655554433221111110 012223455677788888888888


Q ss_pred             HHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc-----cc---------cccHHHHH
Q 018824          190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-----EL---------SFNWTGFI  255 (350)
Q Consensus       190 n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~-----e~---------~f~~~G~~  255 (350)
                      ++|++|.+.+.+.+|..++|.|+.++++.++||++++...++.++.+.||+++...     |.         +.+..|-.
T Consensus       115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~  194 (346)
T KOG4510|consen  115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV  194 (346)
T ss_pred             HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence            99999999999999999999999999999999999999999999999999998642     21         23457888


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824          256 SAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIV  302 (350)
Q Consensus       256 lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~  302 (350)
                      .++.+++.-+--.++.|+.-++.|......|.+.++++.-+......
T Consensus       195 aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~i  241 (346)
T KOG4510|consen  195 AAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASI  241 (346)
T ss_pred             HHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhc
Confidence            88888887777777888877787777666777777777665554443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.99  E-value=1.2e-07  Score=88.17  Aligned_cols=173  Identities=17%  Similarity=0.208  Sum_probs=138.3

Q ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHh
Q 018824          127 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA  206 (350)
Q Consensus       127 ~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika  206 (350)
                      +.|.++..+. |.-++.+|..++.++++..+.   +.+.+++++++..++..|+....-+...+.|++.++.+.+..+-.
T Consensus        30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF  105 (292)
T COG5006          30 FAKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF  105 (292)
T ss_pred             HHHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence            5688877776 899999999999998765542   334567888999999999987777778889999999999999999


Q ss_pred             hhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc-c--cccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHH
Q 018824          207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-T--ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNI  283 (350)
Q Consensus       207 ~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~-~--e~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l  283 (350)
                      +-|+.+.+++    -+|..--.|  +.+.+.|..+..- +  ..+.|..|..+++.+..||+.|.+..||.-+..+...-
T Consensus       106 ~GPL~vA~~~----sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g  179 (292)
T COG5006         106 TGPLAVALLS----SRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAG  179 (292)
T ss_pred             ccHHHHHHHh----ccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchH
Confidence            9999887654    344444455  4457788877532 2  24678999999999999999999999998766777788


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCchhhh
Q 018824          284 YAYISIIALFVCIPPAIIVEGPQLIK  309 (350)
Q Consensus       284 ~~~~~~~s~l~Llp~al~~Eg~~~~~  309 (350)
                      +.+-+.++.++.+|+....-++.+..
T Consensus       180 ~a~gm~vAaviv~Pig~~~ag~~l~~  205 (292)
T COG5006         180 VAVGMLVAALIVLPIGAAQAGPALFS  205 (292)
T ss_pred             HHHHHHHHHHHHhhhhhhhcchhhcC
Confidence            88889999999999988766665543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.93  E-value=1.2e-08  Score=93.98  Aligned_cols=165  Identities=13%  Similarity=0.130  Sum_probs=131.4

Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHH
Q 018824          135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA  214 (350)
Q Consensus       135 fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~l  214 (350)
                      |.+...+.++|+.+..++.-+...  ++++.++++..-+.....++-+.+..+.+|.++++++-+...+-|++-|+-+++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            778889999999998887644332  234344444444556677777888899999999999999888889999999999


Q ss_pred             HHHHHcCccCChhHHHHHHHHHHhhhhhccccc-------cccHHHHHHHHHHHHHHHHHHHHHhhhccCC--CHHHHHH
Q 018824          215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYA  285 (350)
Q Consensus       215 ls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l--~~~~l~~  285 (350)
                      +++++.|++.+|++++.++++++||++..+.|.       .....|-++.+.|-...++....+.|....+  +...++.
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~  207 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF  207 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence            999999999999999999999999999877542       1124799999999998999888888766443  4567889


Q ss_pred             HHHHHHHHHHHHHHHH
Q 018824          286 YISIIALFVCIPPAII  301 (350)
Q Consensus       286 ~~~~~s~l~Llp~al~  301 (350)
                      |+++++.+.+-.-.++
T Consensus       208 ~~NlwStL~Lg~g~lf  223 (337)
T KOG1580|consen  208 YTNLWSTLYLGAGLLF  223 (337)
T ss_pred             HHHHHHHHHhhhhhee
Confidence            9999999887665444

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.91  E-value=1.1e-08  Score=84.64  Aligned_cols=105  Identities=19%  Similarity=0.314  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHH-HHHhcCCCC--CCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHH
Q 018824          143 VIHLLVGVVYCLV-SWAVGLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF  218 (350)
Q Consensus       143 ~~r~~ia~l~ll~-~~~~~l~~~--~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~l  218 (350)
                      .+|+.++.+++.. ....+..++  +...++.+......|++.. .+..+.++|+++.+ +....+.+++|+|+++++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4688887776543 222211110  1122234556666677664 67888899999999 58889999999999999999


Q ss_pred             HcCccCChhHHHHHHHHHHhhhhhcccccc
Q 018824          219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS  248 (350)
Q Consensus       219 flkEr~t~~~ilsllliv~GV~l~~~~e~~  248 (350)
                      ++|||++++++.+++++++|+.++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999877654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.90  E-value=8.8e-08  Score=90.25  Aligned_cols=173  Identities=17%  Similarity=0.279  Sum_probs=130.1

Q ss_pred             HHHHHHHHh-------cCCcHHHHHHHHHHHHHHHHH-HHHHhcCCCC-C-------CC-ChH----HHHHHHHHHHHHH
Q 018824          125 NILNKRIYN-------YFPYPYFVSVIHLLVGVVYCL-VSWAVGLPKR-A-------PI-DSK----LLKLLIPVAVCHA  183 (350)
Q Consensus       125 ~i~nK~il~-------~fp~P~~lt~~r~~ia~l~ll-~~~~~~l~~~-~-------~i-~~~----~~~~ll~lgl~~~  183 (350)
                      ++..||.-+       .|.+|+..+ .-++.+-..|+ ++...+.+.. +       .+ +.+    +.+.++|-++|-.
T Consensus        19 tl~aKwadsi~~eg~pgfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di   97 (372)
T KOG3912|consen   19 TLVAKWADSIQAEGSPGFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDI   97 (372)
T ss_pred             HHHHHHHHhhhhhCCCccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHH
Confidence            467788755       166787665 45555654443 2222221110 0       01 111    2345677888888


Q ss_pred             HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc----------cccHHH
Q 018824          184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----------SFNWTG  253 (350)
Q Consensus       184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~----------~f~~~G  253 (350)
                      .+...-+.++.+++++.+|+++....+|+.+++..|++++++.++|++++.+.+|++.+...|.          +.-..|
T Consensus        98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitG  177 (372)
T KOG3912|consen   98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITG  177 (372)
T ss_pred             hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhh
Confidence            8777779999999999999999999999999999999999999999999999999998765542          112689


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHH
Q 018824          254 FISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPP  298 (350)
Q Consensus       254 ~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~  298 (350)
                      +.+.+++.+.-|.+.++.+|..+  +++|.+...|..++|.+++-..
T Consensus       178 dllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL  224 (372)
T KOG3912|consen  178 DLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLL  224 (372)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHH
Confidence            99999999999999999888775  5789999999999996665433

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.88  E-value=2.2e-08  Score=84.10  Aligned_cols=119  Identities=20%  Similarity=0.268  Sum_probs=98.0

Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 018824          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT  201 (350)
Q Consensus       124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~  201 (350)
                      ..++.|..+++.+ |.+-+++|-.+...++.. ....|. ...-.++++.|..+..-|+...++..+++.+++...+|..
T Consensus        18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V   96 (140)
T COG2510          18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV   96 (140)
T ss_pred             HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence            4589999999875 999999999988876643 333231 1122356777877777787777888999999999999988


Q ss_pred             HHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       202 ~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      .-+-.+.|+++++++++|+|||++..+|+|++++++|+.+.+
T Consensus        97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            888899999999999999999999999999999999998865

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.85  E-value=8.9e-07  Score=84.36  Aligned_cols=162  Identities=11%  Similarity=0.049  Sum_probs=135.2

Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHH
Q 018824          135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA  214 (350)
Q Consensus       135 fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~l  214 (350)
                      |.+|.++.+.|-+++.++-.. +.. ..+.+...++.|.....+++.+.++-.++..|++|++-+.-.+.|++--+-+++
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~-~l~-~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYA-MLK-WWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHH-HHh-cccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            778999999998888776432 221 122223334567788899999999999999999999999988999999999999


Q ss_pred             HHHHHcCccCChhHHHHHHHHHHhhhhhccccc---------cccHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHH
Q 018824          215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNI  283 (350)
Q Consensus       215 ls~lflkEr~t~~~ilsllliv~GV~l~~~~e~---------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l  283 (350)
                      ++.++.|+|++..+++..+++.+||.+....+.         +...+|+.++...-+..++.+..++++.+  ++++.++
T Consensus       126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~m  205 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHM  205 (327)
T ss_pred             HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHH
Confidence            999999999999999999999999998654321         23479999999999999999999999875  5899999


Q ss_pred             HHHHHHHHHHHHHHH
Q 018824          284 YAYISIIALFVCIPP  298 (350)
Q Consensus       284 ~~~~~~~s~l~Llp~  298 (350)
                      +++.++++++.....
T Consensus       206 M~~vNLf~~i~~~~~  220 (327)
T KOG1581|consen  206 MFGVNLFSAILNGTY  220 (327)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988776

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.70  E-value=1.6e-07  Score=80.59  Aligned_cols=96  Identities=29%  Similarity=0.396  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc-hHHH
Q 018824          253 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF  324 (350)
Q Consensus       253 G~~lal~S~l~~A~~~Vl~kk~~~-------~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g-~~~~  324 (350)
                      |++++++|+++.++|+++.|+.++       +.|+.++++|+++.+.++++|.+++.|+++.........-.+.+ ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            789999999999999999998763       47899999999999999999999999998865522211101122 3467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc
Q 018824          325 ISDLFWVGMFYHLYNQVCILLTCC  348 (350)
Q Consensus       325 ~~~l~~sGl~~~lyn~~sf~~l~~  348 (350)
                      +..++.+|+..+++|.++|++++.
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~  104 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKL  104 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhh
Confidence            888999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.64  E-value=2.1e-05  Score=74.88  Aligned_cols=180  Identities=15%  Similarity=0.204  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCC-CC--CChHHHHHHHHHHHHHHHHHH
Q 018824          112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKR-AP--IDSKLLKLLIPVAVCHALGHV  187 (350)
Q Consensus       112 ~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~-~~--i~~~~~~~ll~lgl~~~l~~~  187 (350)
                      .--.+|+..    .++.|.+.. .| +..+...|.+-+..++... ...|..+. ..  -+++.+..+...+++-+.+.+
T Consensus        14 ~Ay~lwG~l----p~y~kll~~-~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~   87 (293)
T COG2962          14 LAYLLWGLL----PLYFKLLEP-LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW   87 (293)
T ss_pred             HHHHHHHHH----HHHHHHHcc-CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence            344556554    345666544 45 8889899999888765432 22111110 00  011233334444444444555


Q ss_pred             HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 018824          188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR  267 (350)
Q Consensus       188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~  267 (350)
                      ...+|..+..+-.++.=....|++.++++.+|+|||+++.|++++.+..+||..-.....++.|..+.+    +++|++|
T Consensus        88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Y  163 (293)
T COG2962          88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLY  163 (293)
T ss_pred             HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHH
Confidence            556666665555666667899999999999999999999999999999999998766556777765544    5689999


Q ss_pred             HHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 018824          268 SIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVE  303 (350)
Q Consensus       268 ~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~E  303 (350)
                      ...-|+.  ++|+.+-...-.++-....+.+.++.|
T Consensus       164 gl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~  197 (293)
T COG2962         164 GLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLA  197 (293)
T ss_pred             HHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHh
Confidence            9876664  566665554443333333333333333

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.60  E-value=3.6e-06  Score=78.33  Aligned_cols=114  Identities=20%  Similarity=0.121  Sum_probs=87.7

Q ss_pred             HHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHhhhcchHHHH
Q 018824          125 NILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTH  202 (350)
Q Consensus       125 ~i~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~-~l~~~~~n~sl~~vsvs~~~  202 (350)
                      .++.|+..++.+ .+..+..+++.++.+++.+..... .+....+.+++..++..+++. ..+..+.+.++++.+++.++
T Consensus       144 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s  222 (260)
T TIGR00950       144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAAS  222 (260)
T ss_pred             HHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence            467888877654 234555578888877665432211 122233556676677777765 46788899999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhh
Q 018824          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV  239 (350)
Q Consensus       203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV  239 (350)
                      ++..++|++.++++++++||+++..++.|..+++.|+
T Consensus       223 ~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       223 ILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999986

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.57  E-value=2.3e-05  Score=76.42  Aligned_cols=137  Identities=15%  Similarity=0.236  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc---
Q 018824          171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---  247 (350)
Q Consensus       171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~---  247 (350)
                      +..++...+++|++.+-+...++.+.+.+.+++...+-.+.++++..+++++|.+++||.++++.+.|+.+...++.   
T Consensus        91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            44456666778888766889999999999999999999999999999999999999999999999999999863211   


Q ss_pred             -------c-ccHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchh
Q 018824          248 -------S-FNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQL  307 (350)
Q Consensus       248 -------~-f~~~G~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~  307 (350)
                             + -.+.|+...+.+.++.++-.+|.+|.++  +.+-+....-.+.+|.++.+...+..|+...
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i  240 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI  240 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence                   1 1378999999999999999999999985  4555555555566777776666666665544

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.47  E-value=1.7e-06  Score=81.44  Aligned_cols=196  Identities=17%  Similarity=0.198  Sum_probs=146.6

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC-cHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCChHHHHHHHHH
Q 018824          103 DRYPALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPV  178 (350)
Q Consensus       103 ~~~~~l~~~~~~~~W~~~s~~~~i~nK~il~~--fp-~P~~lt~~r~~ia~l~ll~~~~~~l~-~~~~i~~~~~~~ll~l  178 (350)
                      +|.+..+..+.....++.-........++++.  |. +-|.+++.|+++=..+.++ ....+. ++..++   |+....+
T Consensus        37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~gli-e~~~~~~k~r~iP---~rtY~~l  112 (367)
T KOG1582|consen   37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLI-ELQLIQTKRRVIP---WRTYVIL  112 (367)
T ss_pred             cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhhe-EEEeecccceecc---hhHhhhh
Confidence            33444455555555555555555666777764  54 7899999999876543322 111122 222233   5666777


Q ss_pred             HHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc----ccccHHHH
Q 018824          179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGF  254 (350)
Q Consensus       179 gl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e----~~f~~~G~  254 (350)
                      +.+-...+.++|-|+.|++-+.-.+.|.+--+-+++.+.++-++|.++..+.+..+..+|.++....|    .+||..|+
T Consensus       113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv  192 (367)
T KOG1582|consen  113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGV  192 (367)
T ss_pred             HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeH
Confidence            77777778899999999999988888999988899999999999999999999999999999987655    47899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824          255 ISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIV  302 (350)
Q Consensus       255 ~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~  302 (350)
                      ++.-.+-++.|+-.-+++|.++  +-++.++..|...+|+++++.+....
T Consensus       193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT  242 (367)
T KOG1582|consen  193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT  242 (367)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence            9999999999887777777764  34567888999999999988776654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.38  E-value=2.2e-05  Score=75.19  Aligned_cols=116  Identities=20%  Similarity=0.251  Sum_probs=84.7

Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHH
Q 018824          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHT  203 (350)
Q Consensus       125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~i  203 (350)
                      ++..|+..++.+ |.... +...++.+.+.+..... ......+...+...+.++++.+ +++.+.++++++.+++.+++
T Consensus       164 ~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~  240 (293)
T PRK10532        164 ILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQ-AGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT  240 (293)
T ss_pred             HHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHc-cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence            356677766554 66654 44455555443322211 1112234445555567777654 46788899999999999999


Q ss_pred             HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      +..++|++..++++++++|+++..+++|..++++|+....
T Consensus       241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.38  E-value=2.1e-05  Score=77.93  Aligned_cols=120  Identities=14%  Similarity=0.147  Sum_probs=85.8

Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHh-cCCCC---CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 018824          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAV-GLPKR---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS  199 (350)
Q Consensus       125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~-~l~~~---~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs  199 (350)
                      ++..|.....+|.+...++++..++.+.+.+ .... +....   ...+.. ...++..+++-.++.++.|+++++.+++
T Consensus       205 ~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~  283 (358)
T PLN00411        205 FILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPL  283 (358)
T ss_pred             HHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence            3566777677775667777888877765432 2221 11000   011212 1123334444445677889999999999


Q ss_pred             HHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       200 ~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      .+.+...++|+|.+++++++++|++++.+++|.++++.|+.++..+
T Consensus       284 ~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        284 YLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999987643

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.34  E-value=1.4e-06  Score=78.55  Aligned_cols=120  Identities=13%  Similarity=0.097  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--cc
Q 018824          172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--SF  249 (350)
Q Consensus       172 ~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--~f  249 (350)
                      .++..|.+++.+..++.+..+++.++.+.++-+.++.-.|+.+++++++|+|+..-++++.++.+.|++++++-|.  ..
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            4456788888888888999999999999999999999999999999999999999999999999999999887553  34


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHH
Q 018824          250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIA  291 (350)
Q Consensus       250 ~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s  291 (350)
                      ++.|..++++|++..++|.|+.|+...+-+--+...+++..+
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LG  174 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLG  174 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHH
Confidence            689999999999999999999999886543333333334333

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.32  E-value=2.8e-05  Score=74.39  Aligned_cols=118  Identities=16%  Similarity=0.142  Sum_probs=88.4

Q ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHH
Q 018824          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHT  203 (350)
Q Consensus       126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~i  203 (350)
                      +.+|..-..  ++...+.+++.++...+.+. +..+.......+.+.|..++..+++.+ ++..+.+.++++.+++...+
T Consensus       167 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        167 VWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             HHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence            556665332  35566778888887765432 221111111124456777777777644 57788999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      +..++|++.++++++++||+++..+++|.++++.|+.+....
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999887543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.28  E-value=3.3e-05  Score=64.01  Aligned_cols=64  Identities=16%  Similarity=0.231  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      ++..+..+...++++++++.+..+-++.++++.+++++++|||++.++++|+.++++|+.++..
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3556778888999999999999999999999999999999999999999999999999988753

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.28  E-value=3.2e-05  Score=74.16  Aligned_cols=116  Identities=14%  Similarity=0.183  Sum_probs=82.5

Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 018824          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH  202 (350)
Q Consensus       124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~  202 (350)
                      .++++|..-++.+ |....  . ..+.+.+.+ ....+ ......+.+.|..++..++...+++++.+.++++.+++.++
T Consensus       171 ~~v~~k~~~~~~~-~~~~~--~-~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s  245 (295)
T PRK11689        171 YCNVTRKYARGKN-GITLF--F-ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA  245 (295)
T ss_pred             HHHHHhhccCCCC-chhHH--H-HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence            3466777655543 55432  2 222232222 22211 11123455566666666665556788999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      ++..++|++.+++++++++|+++..+++|.++++.|+.+...
T Consensus       246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999987643

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.07  E-value=8.1e-07  Score=82.88  Aligned_cols=187  Identities=8%  Similarity=0.065  Sum_probs=135.8

Q ss_pred             HHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 018824          122 VIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF  200 (350)
Q Consensus       122 ~~~~i~nK~il~~-fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~  200 (350)
                      ...++.+.++-+. .+-|..-+++....=++.-.+...+|.    +.-+..|+..+.+++.-.-++.+-.-++||++...
T Consensus        31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtS  106 (336)
T KOG2766|consen   31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTS  106 (336)
T ss_pred             HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHH
Confidence            3344666666664 556777666655433332222222221    11123456667777765545555556899999998


Q ss_pred             HHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-------ccc-HHHHHHHHHHHHHHHHHHHHHh
Q 018824          201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFN-WTGFISAMISNISFTYRSIYSK  272 (350)
Q Consensus       201 ~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-------~f~-~~G~~lal~S~l~~A~~~Vl~k  272 (350)
                      .+.+-.-....+++++|+|+|.|..+.++.|++++++||+++...|.       ..| ..|+++.++++-+||..|+..+
T Consensus       107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE  186 (336)
T KOG2766|consen  107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE  186 (336)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence            88888777777889999999999999999999999999999876553       123 5899999999999999999999


Q ss_pred             hhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchh
Q 018824          273 KAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLS  313 (350)
Q Consensus       273 k~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~  313 (350)
                      .+-++.|-.+++....++|.++-..= ++.|..+...-+|.
T Consensus       187 flvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~  226 (336)
T KOG2766|consen  187 FLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD  226 (336)
T ss_pred             HHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh
Confidence            88899999999999999999988777 45576665554553

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.07  E-value=0.00027  Score=67.86  Aligned_cols=121  Identities=18%  Similarity=0.213  Sum_probs=85.1

Q ss_pred             HHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHH-HHHhcCCC-----CCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhh
Q 018824          125 NILNKRIYNYFPYP--YFVSVIHLLVGVVYCLV-SWAVGLPK-----RAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA  195 (350)
Q Consensus       125 ~i~nK~il~~fp~P--~~lt~~r~~ia~l~ll~-~~~~~l~~-----~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~  195 (350)
                      ++..|...++.+.|  .....+...++.+.... .+...-..     ....+.+.|..++.++++.+ ++..+.+.++++
T Consensus       159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~  238 (299)
T PRK11453        159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR  238 (299)
T ss_pred             HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45667665544323  34445555555443321 12111111     01234566777777777655 467888999999


Q ss_pred             cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       196 vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      .+...+.++..++|++..++++++++|+++..+++|..++++|+.+...+
T Consensus       239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.97  E-value=4.3e-05  Score=72.69  Aligned_cols=66  Identities=11%  Similarity=0.107  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       176 l~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      ...++...+++.+.+.++++.+++....+..++|++..+++++++||+++..+++|..++++|+.+
T Consensus       215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            333344556788999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.96  E-value=0.00037  Score=66.86  Aligned_cols=70  Identities=10%  Similarity=0.114  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       174 ~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      .+...++...+++.+.+.++++.+.+.++.+...+|++..++++++++|+++..++.|..+++.|+.+..
T Consensus       215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3444555555788999999999999999999999999999999999999999999999999998887764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.96  E-value=1.2e-05  Score=75.99  Aligned_cols=164  Identities=16%  Similarity=0.200  Sum_probs=117.3

Q ss_pred             HHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhh-cchHHHHH
Q 018824          127 LNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHT  203 (350)
Q Consensus       127 ~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~-vsvs~~~i  203 (350)
                      +-..+.++.| .--.+++.|+++-+.--++.. .+. ..+++++.+++.  ..++ ++...++++|+++++ ++++.+.+
T Consensus        21 ~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~--i~V~-mFF~vnv~NN~al~f~I~~PlHiI   96 (330)
T KOG1583|consen   21 FLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYA--ITVA-MFFIVNVTNNYALKFNIPMPLHII   96 (330)
T ss_pred             HHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCchhhhh--eehh-eeeeeeeeccceeeecccceEEEE
Confidence            3445555555 335788888887666433321 111 122455554442  2333 344556889999997 89999999


Q ss_pred             HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc---cc--------------ccc--HHHHHHHHHHHHHH
Q 018824          204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNISF  264 (350)
Q Consensus       204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~---e~--------------~f~--~~G~~lal~S~l~~  264 (350)
                      +++..++.+++++++++|+|.+.+|+.+++++.+|+.+.+..   |.              ++-  ..|+.+...+.+..
T Consensus        97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s  176 (330)
T KOG1583|consen   97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS  176 (330)
T ss_pred             EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999986532   21              111  25888888888999


Q ss_pred             HHHHHHHhhhccC--CCHHHHHHHHHHHHHHH
Q 018824          265 TYRSIYSKKAMTD--MDSTNIYAYISIIALFV  294 (350)
Q Consensus       265 A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~  294 (350)
                      |...++++..-++  -++-+.++|...++...
T Consensus       177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~  208 (330)
T KOG1583|consen  177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPL  208 (330)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHhccch
Confidence            9988888876654  46788999998766543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.93  E-value=9.7e-05  Score=70.86  Aligned_cols=121  Identities=10%  Similarity=0.065  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHH-hcCCCCCC---------CChH-HHHHHHHHHH-HHHHHHHH
Q 018824          123 IFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP---------IDSK-LLKLLIPVAV-CHALGHVT  188 (350)
Q Consensus       123 ~~~i~nK~il~--~fp~P~~lt~~r~~ia~l~ll~~~~-~~l~~~~~---------i~~~-~~~~ll~lgl-~~~l~~~~  188 (350)
                      ...++.|...+  +.+ |..++.+++.++.+.+.+... ........         .... .+...+..++ ++...+..
T Consensus       159 ~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (302)
T TIGR00817       159 SRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV  237 (302)
T ss_pred             HHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence            34567787776  454 888899999888876654322 11100000         0000 0111112222 22223345


Q ss_pred             HHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       189 ~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      .+.+++++++..+++.....|++++++++++++|+++..+++|..++++|+.+...
T Consensus       238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999988653

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.84  E-value=0.0013  Score=56.21  Aligned_cols=124  Identities=13%  Similarity=0.148  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHhc------CCcHHHHHHHHHHHHHHHHHHHHHh-cCCCC----C-----CC--ChHHHHHHHHHHH
Q 018824          119 FLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWAV-GLPKR----A-----PI--DSKLLKLLIPVAV  180 (350)
Q Consensus       119 ~~s~~~~i~nK~il~~------fp~P~~lt~~r~~ia~l~ll~~~~~-~l~~~----~-----~i--~~~~~~~ll~lgl  180 (350)
                      .+....+++.|..+++      -.+|+.+....-..+.+++.+.+.. ...+.    .     +.  +.+.+..++..++
T Consensus        10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (153)
T PF03151_consen   10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL   89 (153)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence            3344455677777765      2358888777777777766544321 11110    0     00  1233445556666


Q ss_pred             HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824          181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (350)
Q Consensus       181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~  242 (350)
                      +....++..+..++++++-.++++...--+++.++++++++|+++..++.|+++.++|+.+-
T Consensus        90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            66677888899999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.80  E-value=0.0025  Score=60.70  Aligned_cols=124  Identities=19%  Similarity=0.229  Sum_probs=97.1

Q ss_pred             CCCCh--HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHH----HHHHHHH
Q 018824          165 APIDS--KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWL----SLAPVVI  237 (350)
Q Consensus       165 ~~i~~--~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~il----sllliv~  237 (350)
                      +.++.  +.+..-+.-|++.++++.....|+++..+|.+.=+ ..+.-+.+.++++++++|-.+..++.    +++++++
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liii  115 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIII  115 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHH
Confidence            44543  56777788899999999999999999999887655 46667779999999999977765544    8889999


Q ss_pred             hhhhhccccccc-------c-HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHH
Q 018824          238 GVSMASLTELSF-------N-WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISII  290 (350)
Q Consensus       238 GV~l~~~~e~~f-------~-~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~  290 (350)
                      |+.+.+..|.+.       | ..|....+++.+.|..|.++.|-  .++|+++...=+++-
T Consensus       116 Gv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiG  174 (269)
T PF06800_consen  116 GVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIG  174 (269)
T ss_pred             HHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHH
Confidence            999988755311       2 46999999999999999999776  467888777655443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.79  E-value=0.0022  Score=59.65  Aligned_cols=118  Identities=28%  Similarity=0.381  Sum_probs=85.8

Q ss_pred             HHHHHHHHHhcCCcHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHH
Q 018824          124 FNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFT  201 (350)
Q Consensus       124 ~~i~nK~il~~fp~P~~lt~-~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~  201 (350)
                      ..+.+|... +.+ +..... +++............ .... .+.+.+++..+...+++.+ .++.+.+.+++..+++..
T Consensus       169 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~  244 (292)
T COG0697         169 YTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV  244 (292)
T ss_pred             HHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence            446777666 332 545554 454422222222221 1111 2345567888888888877 488899999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       202 ~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      .++..++|++..++++++++|+++..++.|..+++.|+.+....
T Consensus       245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999887543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.58  E-value=0.00063  Score=57.90  Aligned_cols=70  Identities=16%  Similarity=0.157  Sum_probs=60.2

Q ss_pred             HHHHH-HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHH--HcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          176 IPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       176 l~lgl-~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~l--flkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      +..|+ ++.++.++.+.++++.+++.+.-+-+..+.++.+.++.  ++||++++.+++|++++++|+.++..+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            34444 45667889999999999999999989999888888885  899999999999999999999998654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.58  E-value=0.0015  Score=62.80  Aligned_cols=126  Identities=12%  Similarity=0.173  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH---HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH
Q 018824          108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLL---VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHAL  184 (350)
Q Consensus       108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~---ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l  184 (350)
                      +..++...+-|..   +.+.+|.. + + .|...++.|..   ++.++....+  + +.++ ...+.....+..|+++.+
T Consensus       154 i~~~l~sg~~y~~---~~~~~~~~-~-~-~~~~~~~~~~~g~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~Gi~~~i  223 (290)
T TIGR00776       154 ILLLLMSTIGYLV---YVVVAKAF-G-V-DGLSVLLPQAIGMVIGGIIFNLGH--I-LAKP-LKKYAILLNILPGLMWGI  223 (290)
T ss_pred             HHHHHHHHHHHHH---HHHHHHHc-C-C-CcceehhHHHHHHHHHHHHHHHHH--h-cccc-hHHHHHHHHHHHHHHHHH
Confidence            3344444443333   33566755 2 3 37777555544   3333222222  1 1122 223333344558888877


Q ss_pred             HHHHHHHHhh-hcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHH----HHHHHHHHhhhhhc
Q 018824          185 GHVTSNVSFA-AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS  243 (350)
Q Consensus       185 ~~~~~n~sl~-~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~i----lsllliv~GV~l~~  243 (350)
                      +..+...+.+ +.+++.+.++.+.+|+...+.+++++||+.+++++    +|.++++.|+.+..
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            8888889999 99999999999999999999999999999999999    99999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.48  E-value=0.0039  Score=61.56  Aligned_cols=121  Identities=15%  Similarity=0.084  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHH-hcCCC-C-------CCCChHHHH----HHHHHHHHHH
Q 018824          123 IFNILNKRIYNYFP------YPYFVSVIHLLVGVVYCLVSWA-VGLPK-R-------APIDSKLLK----LLIPVAVCHA  183 (350)
Q Consensus       123 ~~~i~nK~il~~fp------~P~~lt~~r~~ia~l~ll~~~~-~~l~~-~-------~~i~~~~~~----~ll~lgl~~~  183 (350)
                      ..+++.|...++.+      .+..+..+...++.+++++... ....+ .       ...+...+.    .++.-++.+.
T Consensus       208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~  287 (350)
T PTZ00343        208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY  287 (350)
T ss_pred             HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence            45577888776421      2554555566777776554322 11000 0       001110111    1222233333


Q ss_pred             HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      +.+...++++++++...+++...+.|+++.++++++++|+++..+++|.+++++|+.+.+
T Consensus       288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            334444469999999999999999999999999999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.32  E-value=0.0036  Score=52.68  Aligned_cols=69  Identities=16%  Similarity=0.245  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       176 l~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      ...-+++.++.++...++++++++.+.-+ ....-+.+++++++++||++++.+++++.++++|+.++..
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            34444566677888899999999998766 5678899999999999999999999999999999988754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.24  E-value=0.0084  Score=49.59  Aligned_cols=66  Identities=15%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824          177 PVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (350)
Q Consensus       177 ~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~  242 (350)
                      ..-+++.++..+...+++++|++.+--+ ...--+.+.+++++++||++++.++.++.+++.|+...
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3344455667777889999999988655 55667888999999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.21  E-value=0.006  Score=50.11  Aligned_cols=68  Identities=16%  Similarity=0.155  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       176 l~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      +..-+++..+..+...+++.+|++.+--+ ...--+.+.+++++++||++++.++.++.+++.|+..+.
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33344566677788889999999988655 556778899999999999999999999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.20  E-value=0.0058  Score=50.62  Aligned_cols=66  Identities=17%  Similarity=0.220  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          179 AVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       179 gl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      -+++.++..+...+++++|++.+.-+ ....-+.+.+++++++||++++.++.++.++++|+.++..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33455666777889999999998766 4567788899999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.09  E-value=0.0056  Score=50.26  Aligned_cols=67  Identities=19%  Similarity=0.248  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          178 VAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       178 lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      .-+++..+..+...++++++++.+--+ ...--+.+++.+++++||+.+..+++++.++++|+...-.
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            334455566777889999999988544 6666788999999999999999999999999999987643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.84  E-value=0.031  Score=52.69  Aligned_cols=116  Identities=23%  Similarity=0.257  Sum_probs=79.8

Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHH
Q 018824          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTH  202 (350)
Q Consensus       124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~  202 (350)
                      +.+..|.+-+.-+-+.. ...-+.+++++.+++-... -...-++++-...-+.++++.+ +-..+...++...+...+.
T Consensus       163 YIv~G~r~g~~~~g~~g-~a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         163 YIVLGQRAGRAEHGTAG-VAVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             HHHHcchhcccCCCchH-HHHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            44566666544343333 3467777777665442210 1111123333333445555543 3466888999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      ++.+++|.+-++.++++++|+++..||+++..++.+..-
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999887653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.40  E-value=0.091  Score=50.55  Aligned_cols=130  Identities=16%  Similarity=0.311  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHH-HH--hcC-CCCCCC---ChHHHHHHHHHHHHHHHH
Q 018824          114 FFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVS-WA--VGL-PKRAPI---DSKLLKLLIPVAVCHALG  185 (350)
Q Consensus       114 ~~~W~~~s~~~~i~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~-~~--~~l-~~~~~i---~~~~~~~ll~lgl~~~l~  185 (350)
                      ..+...+......+.|.++++.+ .|+.+.++.-.++.++.... +.  .+. .+..+.   .++.+..++..+++...+
T Consensus       159 l~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g  238 (303)
T PF08449_consen  159 LLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALG  238 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            34444445556678888887533 57777777666666654322 22  111 110011   123455666777777777


Q ss_pred             HHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       186 ~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      +.+.+.-.+..+.-...++..+--+++.+++.+++++++++.+|.|+++++.|..+-.
T Consensus       239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~  296 (303)
T PF08449_consen  239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYS  296 (303)
T ss_pred             HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHH
Confidence            7777777788888888899999999999999999999999999999999999988754

; GO: 0055085 transmembrane transport

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.18  E-value=0.045  Score=43.70  Aligned_cols=55  Identities=16%  Similarity=0.303  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHH
Q 018824          181 CHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV  235 (350)
Q Consensus       181 ~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllli  235 (350)
                      ++..+..+...++++++++.+.-+ .....+.+.+++.+++||+++..++.++.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            566677888899999999998654 5688999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.96  E-value=1  Score=44.54  Aligned_cols=102  Identities=20%  Similarity=0.212  Sum_probs=80.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccC-------ChhHHHHHHHHHHhh
Q 018824          168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQL-------PLTLWLSLAPVVIGV  239 (350)
Q Consensus       168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~-------t~~~ilsllliv~GV  239 (350)
                      +.+.+..-+.-|++..+++.....++++..++.+.-+ ..+.-++..++..++++|-.       ......+++++++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            4456666777888888999999999999999988654 56778888889999988643       234677888899999


Q ss_pred             hhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 018824          240 SMASL----TEL--------SFN-WTGFISAMISNISFTYRSI  269 (350)
Q Consensus       240 ~l~~~----~e~--------~f~-~~G~~lal~S~l~~A~~~V  269 (350)
                      ++.+.    .|.        ++| ..|++.+++|.+.++.|+.
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            99776    332        233 5799999999999999993

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.94  E-value=0.39  Score=41.26  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=78.3

Q ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 018824          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT  203 (350)
Q Consensus       125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~-~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~i  203 (350)
                      ..+|-.+-+...+|+.-+++-+.++.+.+.+.+....+ +..+.++..| +...-|++......+.++....++++.+..
T Consensus        17 ~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~   95 (138)
T PF04657_consen   17 AAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGVFFVLSNIILVPRLGAALTTI   95 (138)
T ss_pred             HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence            35555555555569999999999998876544332211 1111221123 233467777667778888888988888765


Q ss_pred             H-HhhhHHHHHHHHHH----HcCccCChhHHHHHHHHHHhhhh
Q 018824          204 I-KALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       204 i-ka~~Pifv~lls~l----flkEr~t~~~ilsllliv~GV~l  241 (350)
                      + -.-+-+...+++.+    .-|+++++.+++++.++++|+.+
T Consensus        96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5 45566777777875    35789999999999999999864

>TIGR00803 nst UDP-galactose transporter

Probab=95.83  E-value=0.043  Score=50.25  Aligned_cols=83  Identities=20%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc---------------------------c
Q 018824          196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------------------------S  248 (350)
Q Consensus       196 vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~---------------------------~  248 (350)
                      ++++.....|+..++++++.++.+.++|.+..++++.++...|+.....+|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5677788899999999999999999999999999999999999875322211                           1


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 018824          249 FNWTGFISAMISNISFTYRSIYSKKAMTDM  278 (350)
Q Consensus       249 f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l  278 (350)
                      ..+.|....+.+.++.++..++.++..++.
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~  111 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG  111 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence            236788888888888889999999876544

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.65  E-value=0.74  Score=44.30  Aligned_cols=74  Identities=15%  Similarity=0.191  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      ..+..+...|..-++...+...|-+.++.+...++.+.+|....+++.+++||+++..++.+-.++-.|+.+.+
T Consensus       209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~  282 (293)
T COG2962         209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFS  282 (293)
T ss_pred             hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45666777777777777888889999999999999999999999999999999999999999988888887764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.65  E-value=0.033  Score=46.34  Aligned_cols=71  Identities=21%  Similarity=0.360  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824          171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (350)
Q Consensus       171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~  242 (350)
                      +|+..+|..+=.. +.+..++.+...++|.+.-+ ++++=+|+++.++++.+|..+++.++|+++++.|+.+.
T Consensus        41 n~~y~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            3566777776443 44555778888888888766 68999999999999999999999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.65  E-value=0.52  Score=46.48  Aligned_cols=59  Identities=17%  Similarity=0.303  Sum_probs=50.4

Q ss_pred             HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc
Q 018824          188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  246 (350)
Q Consensus       188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e  246 (350)
                      .....+++.++.+.++--.++.++.++++.+++|+++++.-+++.+++++|.++....+
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            44566777777777777788899999999999999999999999999999999876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.47  E-value=0.45  Score=45.47  Aligned_cols=66  Identities=20%  Similarity=0.223  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHH----HHHHHHHhh
Q 018824          174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGV  239 (350)
Q Consensus       174 ~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~il----sllliv~GV  239 (350)
                      .-..-|+++..++.+...|.+.+.++.+-.+..+..+...+-+.+++||+=+++++.    +++++++|.
T Consensus       197 ~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  197 KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence            456778899999999999999999999999999999999999999999988877653    444444444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.04  E-value=0.059  Score=52.25  Aligned_cols=62  Identities=24%  Similarity=0.388  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       182 ~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      +.++......|+.+.|.+..+-+.+..-++.++++.+++|||+++..+.|..+++.|+.++.
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            45677788899999999999999999999999999999999999999999999999998754

>TIGR00803 nst UDP-galactose transporter

Probab=94.14  E-value=0.62  Score=42.53  Aligned_cols=65  Identities=14%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       177 ~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      .+.+..+.+..+-.+.+++.+.....+..++.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33344555556667788898888899999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=93.66  E-value=0.12  Score=41.54  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824          262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV  341 (350)
Q Consensus       262 l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~  341 (350)
                      ++|+.+.++.|+..+++|+.....+....+.+ +++...+.+..+......++     -....+.+++.+++.+.+|+..
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQ-----WLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhh-----hhhhhHhhccceehHHHHHHHH
Confidence            46889999999999999999999999999998 77776666544311111111     1123444444456666666655

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00688 rarD rarD protein

Probab=92.51  E-value=3.9  Score=37.95  Aligned_cols=50  Identities=8%  Similarity=0.149  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHH
Q 018824          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI  219 (350)
Q Consensus       170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lf  219 (350)
                      ++|..++..+++..+++.+.+.++++.+++...+..+++|++.++++.++
T Consensus       206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            47888888888766789999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.77  E-value=8.2  Score=33.75  Aligned_cols=119  Identities=18%  Similarity=0.177  Sum_probs=71.1

Q ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 018824          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT  201 (350)
Q Consensus       124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~--~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~  201 (350)
                      -+-+|-.+-+....|..-+++-+.++.+.+......+ .+.+...  ++...+...-|++.+.....+......+.+..+
T Consensus        20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t   98 (150)
T COG3238          20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATT   98 (150)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHH
Confidence            3456666666666799999999999888765433222 2222222  121222333344444433444445556666555


Q ss_pred             HHH-HhhhHHHHHHHHHHHc----CccCChhHHHHHHHHHHhhhhhc
Q 018824          202 HTI-KALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       202 ~ii-ka~~Pifv~lls~lfl----kEr~t~~~ilsllliv~GV~l~~  243 (350)
                      .++ -+-+-+.-+++..+=+    +++++..++++++++++|+.++.
T Consensus        99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            443 4555566666665543    47899999999999999966553

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=91.68  E-value=0.25  Score=47.18  Aligned_cols=74  Identities=12%  Similarity=0.117  Sum_probs=62.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      .+++|..+.-+|++..+++++...++|.=-++-..+.+.+.-+|..+...+|+|+.|++..|.|.++++.-.+.
T Consensus       249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~  322 (346)
T KOG4510|consen  249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW  322 (346)
T ss_pred             cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence            45677778889999989999999999987777777899999999999999999999999999887766654443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.11  E-value=6.9  Score=38.11  Aligned_cols=73  Identities=18%  Similarity=0.306  Sum_probs=59.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          168 DSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~-vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      .++-++.++..+.+.+.++.+-++-++. .++.+ .+|..+-=+++.+++.+.++++.++.+|.++++.+.|..+
T Consensus       237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~-t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTF-TTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHH-HHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            4567888999999999988776666665 45544 4666777899999999999999999999999888888765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.18  E-value=1.9  Score=42.21  Aligned_cols=131  Identities=13%  Similarity=0.087  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--c--CCcHHHHHHHHHHHHHHHHH-HHHHhcCCCCC------CCChHHHHHHHHHH
Q 018824          111 GFFFFMWYFLNVIFNILNKRIYN--Y--FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLIPVA  179 (350)
Q Consensus       111 ~~~~~~W~~~s~~~~i~nK~il~--~--fp~P~~lt~~r~~ia~l~ll-~~~~~~l~~~~------~i~~~~~~~ll~lg  179 (350)
                      ..+...+......-+++.|.++.  .  . +++.+....--++.+.++ +.+........      +.+.. .......+
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s  242 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS  242 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH
Confidence            34555555566667788888884  1  4 377776666666666655 44332111111      11222 22333444


Q ss_pred             HHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824          180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (350)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~  243 (350)
                      ++....+...+..+..++.=.+++....-=+++...++++++++.++.+..|.++.++|+.+-.
T Consensus       243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            6655566777778888888888888766667778889999999999999999999999998865

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=86.57  E-value=0.32  Score=45.90  Aligned_cols=121  Identities=14%  Similarity=0.149  Sum_probs=89.9

Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHH----HHHHHHHHhh
Q 018824          165 APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGV  239 (350)
Q Consensus       165 ~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~i----lsllliv~GV  239 (350)
                      |..+.+.+..-+.-|++.+.++...+-|+++.++|.+.-+ ..+.-+-+.+++++.+||-.+..+.    .++++++.|+
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~  131 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI  131 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence            4455555655666777888899999999999999887644 4556677788899999998777664    4678888999


Q ss_pred             hhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHH
Q 018824          240 SMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYI  287 (350)
Q Consensus       240 ~l~~~~e~--------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~  287 (350)
                      .+.+..|.        +.--.|+...+.|.+.|..|.++.+..  +.|.++...-+
T Consensus       132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f--~v~g~saiLPq  185 (288)
T COG4975         132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF--DVDGLSAILPQ  185 (288)
T ss_pred             eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc--cccchhhhhHH
Confidence            99887653        111479999999999999999988765  35555544443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=86.22  E-value=38  Score=33.68  Aligned_cols=69  Identities=9%  Similarity=0.101  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHHH---HH-hhhHHHHHHHHHHHcCccCC------hhHHHHHHHHHHhhhhhccc
Q 018824          176 IPVAVCHALGHVTSNVSFAAVAVSFTHT---IK-ALEPFFNAAASQFILGQQLP------LTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       176 l~lgl~~~l~~~~~n~sl~~vsvs~~~i---ik-a~~Pifv~lls~lflkEr~t------~~~ilsllliv~GV~l~~~~  245 (350)
                      ..-|+....++.++.++-+..++...-+   +. ++.-++..+-+. ++||+=+      ...+++++++++|..++..+
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            5556677777777777777665544434   55 444455555454 6988755      56678888888888877554

>COG2510 Predicted membrane protein [Function unknown]

Probab=86.07  E-value=7.6  Score=33.25  Aligned_cols=50  Identities=16%  Similarity=0.245  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 018824          254 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVE  303 (350)
Q Consensus       254 ~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~E  303 (350)
                      .++++++++.+++..++.|--.+++||..-+..-+....+++....+...
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g   54 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTG   54 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999998888888888777777765543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.64  E-value=0.52  Score=45.96  Aligned_cols=67  Identities=19%  Similarity=0.296  Sum_probs=58.5

Q ss_pred             HHHH-HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824          178 VAVC-HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (350)
Q Consensus       178 lgl~-~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~  244 (350)
                      .|++ +.++-..++.|+.+.|.+..+-+.++.-++.++++..++|||.++.-.+|.+++++|-.+++.
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            3443 445778888899999999999999999999999999999999999999999999999887653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=82.18  E-value=2.7  Score=39.55  Aligned_cols=71  Identities=15%  Similarity=0.195  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824          171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (350)
Q Consensus       171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l  241 (350)
                      .|..+..++++..+++++-+.-..+-+.-.-+++..+--+|+.++++++++..++.++|++-.+++.|...
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            45667788888888888777666665554556777778899999999999999999999999999888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.3
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.17

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.30  E-value=6.3e-06  Score=66.91  Aligned_cols=70  Identities=16%  Similarity=0.199  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc
Q 018824          177 PVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  246 (350)
Q Consensus       177 ~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e  246 (350)
                      ...+++.++..+...++++.+++.+..+ ..+.|+++.+++++++||++++.+++|+.++++|+.++...+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3334566778888999999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.17  E-value=5.2e-06  Score=70.18  Aligned_cols=66  Identities=17%  Similarity=0.222  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824          180 VCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (350)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~  245 (350)
                      +++.++.++.+.++++++++.+..+ .++.|++++++++++++|++++.+++|++++++|+.++...
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3566678899999999999998888 89999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00