Citrus Sinensis ID: 018840
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| 225424118 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.985 | 0.809 | 0.898 | 0.0 | |
| 356575602 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.982 | 0.807 | 0.869 | 1e-177 | |
| 356536262 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.982 | 0.807 | 0.869 | 1e-177 | |
| 224099433 | 422 | predicted protein [Populus trichocarpa] | 0.982 | 0.815 | 0.872 | 1e-176 | |
| 255570711 | 423 | phosphatidylserine synthase, putative [R | 0.977 | 0.808 | 0.878 | 1e-176 | |
| 224111574 | 423 | predicted protein [Populus trichocarpa] | 0.982 | 0.813 | 0.876 | 1e-174 | |
| 449465912 | 428 | PREDICTED: phosphatidylserine synthase 2 | 0.985 | 0.806 | 0.841 | 1e-173 | |
| 449435204 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.974 | 0.800 | 0.845 | 1e-173 | |
| 449493488 | 426 | PREDICTED: LOW QUALITY PROTEIN: phosphat | 0.974 | 0.800 | 0.845 | 1e-172 | |
| 297734271 | 430 | unnamed protein product [Vitis vinifera] | 0.985 | 0.802 | 0.829 | 1e-172 |
| >gi|225424118|ref|XP_002283058.1| PREDICTED: phosphatidylserine synthase 2 [Vitis vinifera] gi|297737747|emb|CBI26948.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/346 (89%), Positives = 327/346 (94%), Gaps = 1/346 (0%)
Query: 5 EPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGAL 64
EPNGHR RRKD VQ NG+ SS DE DPWTAWAYKPRTIS LLIGACFLIWASGAL
Sbjct: 2 EPNGHRRARRKDSAVQANGNGSLSSVGDEHDPWTAWAYKPRTISLLLIGACFLIWASGAL 61
Query: 65 DPQS-DSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVAL 123
DP+S SG++VTSVKRG+WAMIAVFL YCLLQAPSTVLIRPHPAIWRLVHGMAV+YLV L
Sbjct: 62 DPESRSSGNLVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMAVIYLVCL 121
Query: 124 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVL 183
TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYV ENPTSRFKNVYETLFDEFV+
Sbjct: 122 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVPENPTSRFKNVYETLFDEFVV 181
Query: 184 AHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGI 243
AHIFGWWGKAI+IRNQPLLW+LSIGFELMELTFRHMLPNFNECWWDSIILDIL+CNWFGI
Sbjct: 182 AHIFGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIILDILVCNWFGI 241
Query: 244 WAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 303
WAGMHTVRYFDG+TYEWVGISRQPNIIGK KRTLGQFTPAQWDKDEWHPLLGPWRFIQVL
Sbjct: 242 WAGMHTVRYFDGRTYEWVGISRQPNIIGKVKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 301
Query: 304 TLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIQN 349
+LCI+FLTVELNTFFLKFCLW+PPRNPVI+YRLILWWLIAIPTI+
Sbjct: 302 SLCIVFLTVELNTFFLKFCLWIPPRNPVIVYRLILWWLIAIPTIRE 347
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356575602|ref|XP_003555928.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356536262|ref|XP_003536658.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224099433|ref|XP_002311482.1| predicted protein [Populus trichocarpa] gi|222851302|gb|EEE88849.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255570711|ref|XP_002526310.1| phosphatidylserine synthase, putative [Ricinus communis] gi|223534391|gb|EEF36099.1| phosphatidylserine synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224111574|ref|XP_002315905.1| predicted protein [Populus trichocarpa] gi|222864945|gb|EEF02076.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449465912|ref|XP_004150671.1| PREDICTED: phosphatidylserine synthase 2-like [Cucumis sativus] gi|449519402|ref|XP_004166724.1| PREDICTED: phosphatidylserine synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449435204|ref|XP_004135385.1| PREDICTED: phosphatidylserine synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449493488|ref|XP_004159313.1| PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297734271|emb|CBI15518.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| TAIR|locus:2037788 | 453 | PSS1 "AT1G15110" [Arabidopsis | 0.962 | 0.743 | 0.850 | 2.9e-167 | |
| DICTYBASE|DDB_G0278159 | 487 | pssA "phosphatidylserine synth | 0.857 | 0.616 | 0.480 | 7.3e-75 | |
| UNIPROTKB|Q9BVG9 | 487 | PTDSS2 "Phosphatidylserine syn | 0.891 | 0.640 | 0.413 | 1.4e-64 | |
| UNIPROTKB|E1BYA3 | 442 | PTDSS1 "Phosphatidylserine syn | 0.877 | 0.694 | 0.420 | 2.3e-64 | |
| UNIPROTKB|O08888 | 474 | PTDSS2 "Phosphatidylserine syn | 0.877 | 0.647 | 0.420 | 2.3e-64 | |
| MGI|MGI:1351664 | 473 | Ptdss2 "phosphatidylserine syn | 0.877 | 0.649 | 0.417 | 2.9e-64 | |
| UNIPROTKB|E2R5C7 | 482 | PTDSS2 "Uncharacterized protei | 0.9 | 0.653 | 0.412 | 3.7e-64 | |
| RGD|1307914 | 471 | Ptdss2 "phosphatidylserine syn | 0.877 | 0.651 | 0.417 | 4.7e-64 | |
| ZFIN|ZDB-GENE-040426-837 | 465 | ptdss1 "phosphatidylserine syn | 0.842 | 0.634 | 0.376 | 5.6e-52 | |
| FB|FBgn0037010 | 498 | CG4825 [Drosophila melanogaste | 0.911 | 0.640 | 0.340 | 2.8e-50 |
| TAIR|locus:2037788 PSS1 "AT1G15110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 295/347 (85%), Positives = 320/347 (92%)
Query: 5 EPNGHRGVRRKD-HVVQENG---DTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWA 60
EPNG+R RRK+ H+ + NG D +T +LDPWTAWAYKPRTIS LLIGACFLIWA
Sbjct: 2 EPNGYRKERRKEQHLGRMNGGGGDVET-----DLDPWTAWAYKPRTISLLLIGACFLIWA 56
Query: 61 SGALDPQSD-SGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVY 119
SGALDP S S D+VTSVKRG+WAMIAVFL Y LLQAPSTVLIRPHPAIWRLVHGMAV+Y
Sbjct: 57 SGALDPDSTTSDDLVTSVKRGVWAMIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMAVIY 116
Query: 120 LVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFD 179
LVALTFLLFQ+RDDARQFMKFLHPDLG+ELPE+SYGADCRIYV ++PT+RFKN+Y+T+FD
Sbjct: 117 LVALTFLLFQRRDDARQFMKFLHPDLGIELPEKSYGADCRIYVPDHPTNRFKNLYDTVFD 176
Query: 180 EFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICN 239
EF LAHIFGWWGKAILIRNQPLLW+LSIGFEL+E+TFRHMLPNFNECWWDSI+LDILICN
Sbjct: 177 EFFLAHIFGWWGKAILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDILICN 236
Query: 240 WFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRF 299
WFGIWAGM+TVRYFDGKTYEWVGISRQPNIIGK KRTLGQFTPA WDKDEWHPL GPWRF
Sbjct: 237 WFGIWAGMYTVRYFDGKTYEWVGISRQPNIIGKVKRTLGQFTPAHWDKDEWHPLQGPWRF 296
Query: 300 IQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPT 346
IQVLTLCIIFLTVELNTFFLKF LW+PPRNPVI+YRLILWWLIAIPT
Sbjct: 297 IQVLTLCIIFLTVELNTFFLKFSLWIPPRNPVILYRLILWWLIAIPT 343
|
|
| DICTYBASE|DDB_G0278159 pssA "phosphatidylserine synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BVG9 PTDSS2 "Phosphatidylserine synthase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BYA3 PTDSS1 "Phosphatidylserine synthase 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O08888 PTDSS2 "Phosphatidylserine synthase 2" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1351664 Ptdss2 "phosphatidylserine synthase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R5C7 PTDSS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1307914 Ptdss2 "phosphatidylserine synthase 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-837 ptdss1 "phosphatidylserine synthase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0037010 CG4825 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00030428001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (426 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00021187001 | • | • | 0.907 | ||||||||
| GSVIVG00034191001 | • | 0.899 | |||||||||
| GSVIVG00033053001 | • | 0.899 | |||||||||
| GSVIVG00026323001 | • | 0.899 | |||||||||
| GSVIVG00025319001 | • | 0.899 | |||||||||
| GSVIVG00024115001 | • | 0.899 | |||||||||
| GSVIVG00022270001 | • | 0.899 | |||||||||
| GSVIVG00019084001 | • | 0.899 | |||||||||
| GSVIVG00017959001 | • | 0.899 | |||||||||
| GSVIVG00016909001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 350 | |||
| PLN02930 | 353 | PLN02930, PLN02930, CDP-diacylglycerol-serine O-ph | 0.0 | |
| pfam03034 | 278 | pfam03034, PSS, Phosphatidyl serine synthase | 1e-130 |
| >gnl|CDD|178518 PLN02930, PLN02930, CDP-diacylglycerol-serine O-phosphatidyltransferase | Back alignment and domain information |
|---|
Score = 617 bits (1592), Expect = 0.0
Identities = 279/309 (90%), Positives = 298/309 (96%), Gaps = 1/309 (0%)
Query: 41 AYKPRTISFLLIGACFLIWASGALDPQS-DSGDVVTSVKRGIWAMIAVFLTYCLLQAPST 99
AYKP TIS LLIGACFLIWASGALDP+S SGD+VTSVKRG+WAMIAVFL YCLLQAPST
Sbjct: 1 AYKPHTISLLLIGACFLIWASGALDPESTTSGDLVTSVKRGVWAMIAVFLAYCLLQAPST 60
Query: 100 VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 159
VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR
Sbjct: 61 VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 120
Query: 160 IYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHM 219
IY E+P+SRFKNVY+TLFDEFV+AHI GWWGKAI+IRNQPLLW+LSIGFELMELTFRHM
Sbjct: 121 IYTPEHPSSRFKNVYDTLFDEFVVAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHM 180
Query: 220 LPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQ 279
LPNFNECWWDSI+LD+LICNWFGIWAGMHTV+YFDGKTYEWVGISRQPNIIGK KRTLGQ
Sbjct: 181 LPNFNECWWDSIVLDVLICNWFGIWAGMHTVKYFDGKTYEWVGISRQPNIIGKVKRTLGQ 240
Query: 280 FTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILW 339
FTPAQWDKDEWHPL GPWRF+QVL LC++FLTVELNTFFLKFCLW+PPRNP+I+YRLILW
Sbjct: 241 FTPAQWDKDEWHPLQGPWRFLQVLFLCVVFLTVELNTFFLKFCLWIPPRNPLIVYRLILW 300
Query: 340 WLIAIPTIQ 348
WLIAIPTI+
Sbjct: 301 WLIAIPTIR 309
|
Length = 353 |
| >gnl|CDD|145924 pfam03034, PSS, Phosphatidyl serine synthase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 350 | |||
| KOG2735 | 466 | consensus Phosphatidylserine synthase [Lipid trans | 100.0 | |
| PLN02930 | 353 | CDP-diacylglycerol-serine O-phosphatidyltransferas | 100.0 | |
| PF03034 | 280 | PSS: Phosphatidyl serine synthase; InterPro: IPR00 | 100.0 |
| >KOG2735 consensus Phosphatidylserine synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-138 Score=1013.73 Aligned_cols=333 Identities=53% Similarity=0.946 Sum_probs=315.0
Q ss_pred CCCCCCCCCcccccc-ccccCCCCCCCCCCCccCCccceeecchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhhhH
Q 018840 3 GNEPNGHRGVRRKDH-VVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGI 81 (350)
Q Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~ffykPhTit~L~v~~~~l~y~a~~~~~~~~~~~~~~Ni~~Gi 81 (350)
++||++.|+.||... +.+.-+..+++. ..|++++|||||||||+|++++|.++|+|++.++++ ++++|+|||+
T Consensus 23 ~~e~~~~r~~~r~e~~~~~~~~~~ne~~---vdDit~dffykphTiTlL~i~~~~l~y~a~~~~~~~---~t~~N~~rGi 96 (466)
T KOG2735|consen 23 SVEPNGARKLRRDELHEKMHFRMINERV---VDDITTDFFYKPHTITLLLILICFLIYKAFTGDTEN---TTETNVKRGI 96 (466)
T ss_pred ccCCCCccchhhhhhhhhhccCccceee---eccchhhheecCceehHHHHHHHHHHHHHHhCCCCc---chHHHHHHHH
Confidence 588998888887654 433334444443 459999999999999999999999999999987643 4678999999
Q ss_pred HHHHHHHHhhhhccCCCCcccCCChhHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHcCCCC--CCCCCccccCCCc
Q 018840 82 WAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLG--VELPERSYGADCR 159 (350)
Q Consensus 82 ~a~i~~Fl~~~~l~~pdgpf~RPHPa~WR~V~g~~vlYll~LvFLLFQ~~~daR~~l~~ldP~Lg--~~l~eksYa~nC~ 159 (350)
+|++++||++|++|||||||+|||||+||+|||+||+|+++|+|+||||.+|+||+|+|+||+|| .++|||+||.||+
T Consensus 97 l~~i~~FL~~svlafpngpF~RPHPa~WR~vfg~SViYll~L~FlLFQ~~~d~r~~l~wldPkl~~~~~l~EkeYg~nC~ 176 (466)
T KOG2735|consen 97 LAMIAVFLIISVLAFPNGPFIRPHPALWRIVFGVSVIYLLFLQFLLFQTFDDIRQFLKWLDPKLGGQIELPEKEYGVNCS 176 (466)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHhHHHHHHHHHHHHHhhhHHHHhHheeeCcccCCCcccchhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 7899999999999
Q ss_pred cccccCCccchhhhhhcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHHhh
Q 018840 160 IYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICN 239 (350)
Q Consensus 160 i~tp~~p~~~~~ni~~~~~DiF~~aH~~GW~~KaliiRd~~l~w~~SI~fEl~Elsf~H~LPNF~ECWWDh~iLDVL~CN 239 (350)
+|+|| |+|++ +|+|++|||+||++||++|||+++||++||+||++|++|+|+||||+||||||||||||+||
T Consensus 177 ~~spd-------ri~sh-~D~Fa~aHf~GW~mKalLIR~~~lcw~iSI~wEltE~~f~hlLPNFaECWWD~iILDVLiCN 248 (466)
T KOG2735|consen 177 IYSPD-------RIWSH-LDIFAFAHFLGWAMKALLIRHWVLCWVISIMWELTELTFRHLLPNFAECWWDSIILDVLICN 248 (466)
T ss_pred cCCHH-------HHhhh-hhhhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHHHHheecc
Confidence 99864 68887 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccccccccccccCCCcccchhhhhcccCCCccccccccCCCChhHHHHHHHHHHHHHHHhhhHHHh
Q 018840 240 WFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFL 319 (350)
Q Consensus 240 ~lGI~lGm~~~~~l~~k~Y~W~g~~~i~~~~gK~Kr~~~QFtP~sw~~~~W~~~~s~~R~~~v~~l~~~~ll~ELN~FfL 319 (350)
|+|||+||++||+|+||+|+|+|+++||+++||+||++.||||+||+++||+|.+|++|+++|+.++++||++|||||||
T Consensus 249 glGI~~Gmk~c~~L~mrty~W~sik~i~t~~GK~KR~~lQFTPasW~~~~W~p~ss~~R~~~V~~lviiwlltELNTFFl 328 (466)
T KOG2735|consen 249 GLGIWAGMKTCRWLSMRTYHWESIKNIPTTRGKMKRAALQFTPASWSKFEWHPASSLRRFAAVYTLVIIWLLTELNTFFL 328 (466)
T ss_pred cchhhhHhHHHhhhcccceeeeeeccCcccchhHHHHhhccCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHhhhhccc
Q 018840 320 KFCLWVPPRNPVIIYRLILWWLIAIPTIQN 349 (350)
Q Consensus 320 K~~Lwipp~h~l~~~RL~l~~l~~~pa~RE 349 (350)
||+|||||+||++++||++++++|+|++||
T Consensus 329 Khvf~ipp~Hpvv~~RlIli~~i~aptiRq 358 (466)
T KOG2735|consen 329 KHVFWIPPKHPVVLWRLILIALIAAPTIRQ 358 (466)
T ss_pred heeEecCCCCceeehhHHHHHhhccchHHH
Confidence 999999999999999999999999999998
|
|
| >PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase | Back alignment and domain information |
|---|
| >PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 350 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 1e-04
Identities = 53/389 (13%), Positives = 105/389 (26%), Gaps = 99/389 (25%)
Query: 4 NEPNGHRGVRR-----KDHVVQENGDTDTSSGSDELD-PWTAWAYKPRTISFLLIGACFL 57
+ G R QE ++ + K ++ +
Sbjct: 56 MSKDAVSGTLRLFWTLLSK--QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY- 112
Query: 58 IWASGALDPQSDSGDVVT--SVKRG--IWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVH 113
D + V +V R L LL+ +RP + L+
Sbjct: 113 ---IEQRDRLYNDNQVFAKYNVSRLQPYLK-----LRQALLE------LRPAKNV--LID 156
Query: 114 GMA-----VVYLVALTFLLFQKRDDARQF-MKFLH---PDLGVELPER-SYGADCRIYVH 163
G+ V L Q + D + F + + P+ +E+ ++ Y D
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 164 ENPTSRFKNVYETLFDEFVLAHIFGWWG--KAILI-RNQPLLWLLSI--GFEL---MELT 215
+ +S K ++ E L + +L+ N + F L + LT
Sbjct: 217 SDHSSNIKLRIHSIQAE--LRRLLKSKPYENCLLVLLN---VQNAKAWNAFNLSCKILLT 271
Query: 216 FRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYF-DGKTYE----WVGISRQ---- 266
R + D L + H + ++ Q
Sbjct: 272 TR-----------FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 267 ------P---NIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLT-VELNT 316
P +II + R A W D W + + ++ + L E
Sbjct: 321 EVLTTNPRRLSIIAESIRDG----LATW--DNW-KHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 317 FFLKFCL-----WVPPRNPVIIYRLILWW 340
F + + +P ++ ++W+
Sbjct: 374 MFDRLSVFPPSAHIPTI--LLS---LIWF 397
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00