Citrus Sinensis ID: 018843

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHASA
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHEEEEEEEEccccccHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccHcccccccccHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mssirfdstkqyyTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVlgkfgflhhdpftfdtakkflPAAFVFYLAIFTNtnllrhanvdtfIVFRSLTPLLVALADtafrrqpcpsrltFLSLVIILGGAVgyvatdsgFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWdkhaspfgLICLLVTIAGGvlyqqsvtgpgaapaqreptvskqndtenpsddfggedqgksllgkhasa
Flexible Loop (DISEMBL)
mssirfdstkqyYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGpgaapaqreptvskqndtenpsddfggedqgksllgkhasa
Low Complexity Region (SEG)
MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHASA
Disordered region (IsUnstruct)
*********KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS********************************************
Disordered Region (DISOPRED)
***************SGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV*****NTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY***********************************************
Disordered Region (DISEMBL)
MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV************************DDFGGEDQGKS********
Disordered Region (DISPRO)
*****FDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHASA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
Q84L08	341	GDP-mannose transporter G	yes	no	0.968	0.994	0.736	1e-139
Q9S845	372	GDP-mannose transporter G	no	no	0.902	0.849	0.5	2e-83
P0CS02	397	GDP-mannose transporter 1	yes	no	0.885	0.780	0.215	4e-10
P0CS03	397	GDP-mannose transporter 1	N/A	no	0.885	0.780	0.215	4e-10
P0CS04	420	GDP-mannose transporter 2	no	no	0.862	0.719	0.202	7e-10
P0CS05	420	GDP-mannose transporter 2	N/A	no	0.862	0.719	0.202	7e-10
A5DIN8	353	GDP-mannose transporter O	N/A	no	0.865	0.858	0.233	1e-09
Q6FRE5	324	GDP-mannose transporter O	yes	no	0.797	0.861	0.211	3e-09
Q84L09	375	GDP-mannose transporter G	no	no	0.702	0.656	0.245	1e-08
Q941R4	333	GDP-mannose transporter G	no	no	0.808	0.849	0.23	1e-08

>sp|Q84L08|GONS4_ARATH GDP-mannose transporter GONST4 OS=Arabidopsis thaliana GN=GONST4 PE=2 SV=1

 Score =  494 bits (1273), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/349 (73%), Positives = 285/349 (81%), Gaps = 10/349 (2%)

Query: 1   MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWV 60
           MSS RFDS KQ  TTS LV+GYALCSSLLAVINK AIT FNYPGLLTALQYLT  + V++
Sbjct: 1   MSSSRFDSNKQL-TTSSLVIGYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYL 59

Query: 61  LGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120
           LGK G ++HDPFT+DTAKKFLPAA VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA+A
Sbjct: 60  LGKSGLINHDPFTWDTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIA 119

Query: 121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHM 180
           DT FR QP PSRLTFLSLV+IL GAVGYVATDS FTLTAYSWA AYLVTITTEMVYIKHM
Sbjct: 120 DTVFRSQPLPSRLTFLSLVVILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHM 179

Query: 181 VTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240
           V+N+ LN WG VLYNNLLSL+I+P FWFLTGE+ EVFAAL  + G+ F P  F +VA SC
Sbjct: 180 VSNIKLNIWGLVLYNNLLSLMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASC 239

Query: 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGG 300
           VFG LIS+FGFAAR AISATAFTVTGVVNKFLTVVINVLIWDKHA+P GL+CLL TI GG
Sbjct: 240 VFGFLISYFGFAARNAISATAFTVTGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGG 299

Query: 301 VLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHAS 349
           V YQQSV      P ++      + D+E   +D   E+  + + GK AS
Sbjct: 300 VGYQQSVKLD--KPIEK----VSEKDSEKGEED---EELTQLVPGKLAS 339

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9S845|GONS3_ARATH GDP-mannose transporter GONST3 OS=Arabidopsis thaliana GN=GONST3 PE=2 SV=1

 Score =  309 bits (792), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 163/326 (50%), Positives = 214/326 (65%), Gaps = 10/326 (3%)

Query: 17  GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
           G+  GY L +SLL++INK+AI KF YPG LTA+QY TSA GV +  +   + HD     T
Sbjct: 37  GVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLT 96

Query: 77  AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL 136
             +FLPAA +FYL++FTN+ LL HANVDTFIVFRS  P+ VA+ +T F  QP PS  T+ 
Sbjct: 97  MWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWG 156

Query: 137 SLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNN 196
           SL  I GG++ YV TD  FT+ AYSWA AYLV++T + VYIKH+V  +GLNTWG VLYNN
Sbjct: 157 SLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNN 216

Query: 197 LLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKA 256
           L +L++ P    + GE  ++    +     W+   V   V LSC+FGL ISFFGF+ R+A
Sbjct: 217 LEALLLFPLELLIMGELKKI-KHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRA 275

Query: 257 ISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV--------- 307
           ISAT FTV G+VNK LTVVIN+++WDKH++  G + LLV + GGV+YQQS          
Sbjct: 276 ISATGFTVLGIVNKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQE 335

Query: 308 TGPGAAPAQREPTVSKQNDTENPSDD 333
             P     ++E  +  Q + E+ S D
Sbjct: 336 AKPQEQDEEQEKLLEMQENKESNSVD 361

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CS02|GMT1_CRYNJ GDP-mannose transporter 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=GMT1 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 38/348 (10%)

Query: 5   RFDSTKQYYTTSGL-----VVGYALCSSLLAVINKFAITKFNYPG--LLTALQYLTSALG 57
           R +  K+    SG      ++ Y   S ++ V+NK+ ++  N+    LL A+Q     L 
Sbjct: 46  REERDKKEAMPSGQDQVLPILSYCAASIMMTVVNKYVVSGANFTMTFLLLAIQSSVCVLA 105

Query: 58  VWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLV 117
           V  + K GF+    F  + AK + P + +    I+T +  L+  ++  + +F++LT +L+
Sbjct: 106 VTTVKKLGFISFRDFDKNDAKAWWPISTLLVAVIYTGSKALQFLSIPVYTIFKNLTIILI 165

Query: 118 ALADTAFRRQPCPSRLTFLSLVIILGGA---------------------------VGYVA 150
           A  +  F      S LT  S  +++G +                           VG V+
Sbjct: 166 AYGEV-FMFNGAVSGLTLCSFALMVGSSIIAAWSDITSVWNKEPELDPITGLEITVGPVS 224

Query: 151 TDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLT 210
           T  G     Y W           +++++  +   G   W  + YNNLLS+ I   F  + 
Sbjct: 225 TIGGLN-AGYIWMALNCFVSAAYVLFMRKRIKVTGFKDWDSMYYNNLLSIPILVVFSLVI 283

Query: 211 GEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNK 270
            ++G    AL   A +  +  +  A+A S    + IS+      +   +T +++ G +NK
Sbjct: 284 EDWGSESLALNFPASNRVL--LLSAMAFSGAAAVFISYSTAWCVRITGSTTYSMVGALNK 341

Query: 271 FLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQRE 318
                  +L +   A+   +  + V    GV+Y  + T        R+
Sbjct: 342 LPVAASGILFFGDPANFGNISAIAVGGVAGVVYAVAKTNQAKVEKARQ 389

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Involved in capsule synthesis.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CS03|GMT1_CRYNB GDP-mannose transporter 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=GMT1 PE=3 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 38/348 (10%)

Query: 5   RFDSTKQYYTTSGL-----VVGYALCSSLLAVINKFAITKFNYPG--LLTALQYLTSALG 57
           R +  K+    SG      ++ Y   S ++ V+NK+ ++  N+    LL A+Q     L 
Sbjct: 46  REERDKKEAMPSGQDQVLPILSYCAASIMMTVVNKYVVSGANFTMTFLLLAIQSSVCVLA 105

Query: 58  VWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLV 117
           V  + K GF+    F  + AK + P + +    I+T +  L+  ++  + +F++LT +L+
Sbjct: 106 VTTVKKLGFISFRDFDKNDAKAWWPISTLLVAVIYTGSKALQFLSIPVYTIFKNLTIILI 165

Query: 118 ALADTAFRRQPCPSRLTFLSLVIILGGA---------------------------VGYVA 150
           A  +  F      S LT  S  +++G +                           VG V+
Sbjct: 166 AYGEV-FMFNGAVSGLTLCSFALMVGSSIIAAWSDITSVWNKEPELDPITGLEITVGPVS 224

Query: 151 TDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLT 210
           T  G     Y W           +++++  +   G   W  + YNNLLS+ I   F  + 
Sbjct: 225 TIGGLN-AGYIWMALNCFVSAAYVLFMRKRIKVTGFKDWDSMYYNNLLSIPILVVFSLVI 283

Query: 211 GEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNK 270
            ++G    AL   A +  +  +  A+A S    + IS+      +   +T +++ G +NK
Sbjct: 284 EDWGSESLALNFPASNRVL--LLSAMAFSGAAAVFISYSTAWCVRITGSTTYSMVGALNK 341

Query: 271 FLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQRE 318
                  +L +   A+   +  + V    GV+Y  + T        R+
Sbjct: 342 LPVAASGILFFGDPANFGNISAIAVGGVAGVVYAVAKTNQAKVEKARQ 389

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Involved in capsule synthesis.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|P0CS04|GMT2_CRYNJ GDP-mannose transporter 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=GMT2 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/355 (20%), Positives = 140/355 (39%), Gaps = 53/355 (14%)

Query: 19  VVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
           ++ Y + S ++ V+NKF ++  +F    LL A+Q       VW+  + G ++   +  + 
Sbjct: 84  ILSYCVASIMMTVVNKFVVSGRQFTMTFLLLAIQSFVCVACVWLAKRIGVINFRDWDMND 143

Query: 77  AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA-FRRQPCPSRLTF 135
           AK + P + +    I+T +  L+  ++  + +F++LT +L+A  +   F     P  LT 
Sbjct: 144 AKAWFPVSSLLVAVIYTGSKSLQFLSIPVYTIFKNLTIILIAYGEVIWFGGHVTP--LTL 201

Query: 136 LSLVIILGGAVGYVATDSGFTLT------------------------------AYSWAFA 165
            S  +++G +V     D   TL+                               Y W F 
Sbjct: 202 CSFFLMVGSSVIAAWADISTTLSKLSAGVAVVDPISGADVPLSSISVMDTMNVGYLWMFI 261

Query: 166 YLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV-FAALVASA 224
             +     +++++  +   G   W  + YNNLLS+ +   F  +  ++G   F+      
Sbjct: 262 NCLASAGYVLFMRKRIKVTGFKDWDSMFYNNLLSIPVLFVFSLIIEDWGAASFSRNFPEE 321

Query: 225 GSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKH 284
           G  F   +  A+A S    + IS+      +   AT +++ G +NK       +L +   
Sbjct: 322 GRAF---LLSAIAFSGAAAVFISYSTAWCVRICGATTYSLVGALNKLPVAASGILFFGDP 378

Query: 285 ASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            +   +  +LV    G++Y  + T               Q   E      GGE +
Sbjct: 379 VNFGNVSAILVGGVSGIVYAVAKT--------------NQAKVEKSKQARGGESK 419

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CS05|GMT2_CRYNB GDP-mannose transporter 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=GMT2 PE=3 SV=1

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/355 (20%), Positives = 140/355 (39%), Gaps = 53/355 (14%)

Query: 19  VVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
           ++ Y + S ++ V+NKF ++  +F    LL A+Q       VW+  + G ++   +  + 
Sbjct: 84  ILSYCVASIMMTVVNKFVVSGRQFTMTFLLLAIQSFVCVACVWLAKRIGVINFRDWDMND 143

Query: 77  AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA-FRRQPCPSRLTF 135
           AK + P + +    I+T +  L+  ++  + +F++LT +L+A  +   F     P  LT 
Sbjct: 144 AKAWFPVSSLLVAVIYTGSKSLQFLSIPVYTIFKNLTIILIAYGEVIWFGGHVTP--LTL 201

Query: 136 LSLVIILGGAVGYVATDSGFTLT------------------------------AYSWAFA 165
            S  +++G +V     D   TL+                               Y W F 
Sbjct: 202 CSFFLMVGSSVIAAWADISTTLSKLSAGVAVVDPISGADVPLSSISVMDTMNVGYLWMFI 261

Query: 166 YLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV-FAALVASA 224
             +     +++++  +   G   W  + YNNLLS+ +   F  +  ++G   F+      
Sbjct: 262 NCLASAGYVLFMRKRIKVTGFKDWDSMFYNNLLSIPVLFVFSLIIEDWGAASFSRNFPEE 321

Query: 225 GSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKH 284
           G  F   +  A+A S    + IS+      +   AT +++ G +NK       +L +   
Sbjct: 322 GRAF---LLSAIAFSGAAAVFISYSTAWCVRICGATTYSLVGALNKLPVAASGILFFGDP 378

Query: 285 ASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            +   +  +LV    G++Y  + T               Q   E      GGE +
Sbjct: 379 VNFGNVSAILVGGVSGIVYAVAKT--------------NQAKVEKSKQARGGESK 419

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|A5DIN8|GMT_PICGU GDP-mannose transporter OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=VRG4 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 23/326 (7%)

Query: 15  TSGLVVGYALCSS--LLAVINKFAI--TKFNYPGLLTALQYLTSALGVWVLGKFGFLHHD 70
            +G V  +A C+S  L+ V NKF +   +FN    L A+Q     + +  L   G + + 
Sbjct: 34  NNGPVSIFAYCASSILMTVTNKFVVGAYEFNLNFFLLAVQAAVCLVTIATLKGLGIITYR 93

Query: 71  PFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCP 130
            F  D AKK+ P AF+  L I+T++  L++ ++  + +F++LT +L+A  +  +      
Sbjct: 94  QFNKDEAKKWFPIAFLLVLMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVT 153

Query: 131 SR------LTFLSLVIILGG---AVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV 181
           +       L  LS VI   G     G    +       Y+W F    +    ++ ++  +
Sbjct: 154 TMALGSFILMVLSSVIAYYGDTAETGEKTAEMHLLYLGYAWMFTNCFSSAAFVLIMRKRI 213

Query: 182 TNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPD----VFFAVA 237
                  +  + YNNLLSL +   F FL  ++  V      +    F PD      F + 
Sbjct: 214 KLTNFKDFDTMYYNNLLSLPLLLVFSFLFEDWSSV------NLNKNFPPDNRNTTIFVMI 267

Query: 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTI 297
           LS    + IS+      +  S+T +++ G +NK    +  ++ ++   + + +  + V  
Sbjct: 268 LSGASSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALSGLVFFNAAVNFWSVSSIFVGF 327

Query: 298 AGGVLYQQSVTGPGAAPAQREPTVSK 323
             GV Y  +        AQ+ P  +K
Sbjct: 328 LAGVFYAVAKQKQQKENAQQLPVANK 353

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

>sp|Q6FRE5|GMT_CANGA GDP-mannose transporter OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VRG4 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 129/298 (43%), Gaps = 19/298 (6%)

Query: 19  VVGYALCSSLLAVINKFAITK--FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
           ++ Y   S L+ V NKF +    FN   ++   Q L   + + VL  FG+  + P     
Sbjct: 22  ILCYCASSILMTVTNKFVVNTDGFNMFFVMLFAQSLVCTMCLMVLKMFGYAKYRPLNLID 81

Query: 77  AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA-FRRQPCPSRLTF 135
            K +LP +F+    IFT+   L++  V  + +F++LT +L+A  +   F     P  L+ 
Sbjct: 82  VKNWLPISFLLVFMIFTSAKALKYMPVPIYTIFKNLTIILIAYGEVLFFGGSVTPMELSS 141

Query: 136 LSLVII------LG----GAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG 185
             L+++      LG      +     ++      Y W F   +   + ++ ++  +    
Sbjct: 142 FILMVLSSVVASLGDQQAAKIAQPLANNSILSPEYYWMFLNCICSASFVLIMRKRIKLTN 201

Query: 186 LNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLL 245
              +  + YNN L+L I   F FL+ ++         +    F  +   A+ +S +  + 
Sbjct: 202 FKDYDTMFYNNALALPILLGFSFLSEDWSS------ENLAQNFSGESLSAMIISGMTSVG 255

Query: 246 ISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303
           IS+      +A S+T +++ G +NK    +  ++ +D   +   ++ + +  A G+ Y
Sbjct: 256 ISYCSGWCVRATSSTTYSMVGALNKLPIALAGLIFFDAPRNFLSIMSIFIGFASGLSY 313

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 19/265 (7%)

Query: 18  LVVGYALC--SSLLAVINKFAITKFNYPGLLTAL--QYLTSALGVWVLGKFGFLHHDPFT 73
           LV G A C  S  + ++NK  ++ +N+   ++ +  Q L S L V VL   G +  + F 
Sbjct: 79  LVSGAAYCISSCSMIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFN 138

Query: 74  FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRL 133
           +   + ++P   +F   + +    L++ NV    + ++ T +L  + +    R+   +++
Sbjct: 139 WKLIRVWMPVNVIFVGMLVSGMYSLKYINVAMVTILKNATNILTGIGEVYMFRKRQNNKV 198

Query: 134 TFLSLVIILGGAVGYVATDSGFTLTAYSWAFA-------YLVTITTEMVYIKHMVTNLGL 186
                ++I+    G + TD  F    Y+W  A       Y +T+   M   K    +  L
Sbjct: 199 WAAMFMMIISAISGGI-TDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKSGSL 257

Query: 187 NTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVF-GLL 245
           N    VL NNLLS+        L GE+  V +  V          +F+ VA +  F GL 
Sbjct: 258 NEVSMVLLNNLLSIPFGIILIILLGEWRYVISTDVTK------DSMFWVVATASGFLGLA 311

Query: 246 ISFFGFAARKAISATAFTVTGVVNK 270
           ISF           T +++ G +NK
Sbjct: 312 ISFTSMWFLHQTGPTTYSLVGSLNK 336

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 17/300 (5%)

Query: 16  SGLVVGYALCSSLLAVINKFAITKFNYPG--LLTALQYLTSALGVWVLGKFGFLHHDPFT 73
           SGL    + CS +L  +NKF ++ +N+     L   Q   S + V  L   G +  +P T
Sbjct: 36  SGLAYCISSCSMIL--VNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query: 74  FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRL 133
               K + P   +F   + T+   L++ NV    V +++T ++ A+ +     +   +R+
Sbjct: 94  LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRV 153

Query: 134 TFLSLVIILGGAVGYVATDSGFTLTAYSWAFA-------YLVTITTEMVYIKHMVTNLGL 186
            + +L +++  AV    TD  F    Y+W  A       Y +T+   M   K +  +  L
Sbjct: 154 -WAALFLMIISAVSGGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNL 212

Query: 187 NTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLI 246
           N +  VL NN LSL +     +   E   ++   +       +P  +  + LS + GL I
Sbjct: 213 NEFSMVLLNNTLSLPLGLLLSYFFNEMDYLYQTPLLR-----LPSFWMVMTLSGLLGLAI 267

Query: 247 SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306
           SF          AT +++ G +NK    +  +++++   S      +L  +  GV++ ++
Sbjct: 268 SFTSMWFLHQTGATTYSLVGSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARA 327

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
225445388	349	PREDICTED: GDP-mannose transporter GONST	0.994	0.997	0.822	1e-166
449443123	339	PREDICTED: GDP-mannose transporter GONST	0.934	0.964	0.835	1e-155
255576944	340	GDP-mannose transporter, putative [Ricin	0.931	0.958	0.795	1e-148
297726799	343	Os09g0314333 [Oryza sativa Japonica Grou	0.974	0.994	0.759	1e-146
388514101	345	unknown [Medicago truncatula]	0.954	0.968	0.778	1e-146
125560515	342	hypothetical protein OsI_28203 [Oryza sa	0.94	0.961	0.778	1e-146
115475261	342	Os08g0203900 [Oryza sativa Japonica Grou	0.94	0.961	0.778	1e-145
242048866	338	hypothetical protein SORBIDRAFT_02g02104	0.94	0.973	0.769	1e-144
357477871	419	GDP-mannose transporter [Medicago trunca	0.96	0.801	0.769	1e-144
326502916	337	predicted protein [Hordeum vulgare subsp	0.942	0.979	0.766	1e-143

>gi|225445388|ref|XP_002284977.1| PREDICTED: GDP-mannose transporter GONST4 [Vitis vinifera]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 287/349 (82%), Positives = 314/349 (89%), Gaps = 1/349 (0%)

Query: 1   MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWV 60
           MSS RFDS+KQYY TS LVVGYALCSSLLAVINK AIT+FNYPGLLTALQYLTSALGVWV
Sbjct: 1   MSSTRFDSSKQYYATSSLVVGYALCSSLLAVINKIAITQFNYPGLLTALQYLTSALGVWV 60

Query: 61  LGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120
           LGK GFLHHDPFT + AKKFLPAA VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA+A
Sbjct: 61  LGKLGFLHHDPFTLEIAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIA 120

Query: 121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHM 180
           DT FR+QPCPS+LTF+SL+IILGGAVGYVATDSGFTLTAYSWAFAYLVTIT+EMVYIKHM
Sbjct: 121 DTTFRKQPCPSKLTFMSLLIILGGAVGYVATDSGFTLTAYSWAFAYLVTITSEMVYIKHM 180

Query: 181 VTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240
           VTNLGLNTWGFV YNNLLSL+++P FW LTGEY +VFAA+ +++G+W      FAV+LSC
Sbjct: 181 VTNLGLNTWGFVFYNNLLSLMMAPVFWVLTGEYADVFAAMRSASGNWMDSSALFAVSLSC 240

Query: 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGG 300
           VFGLLISFFGFAARKAISATAFTVTGVVNKFLTV INVLIWDKHASPFGL+CLL+TI GG
Sbjct: 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVAINVLIWDKHASPFGLVCLLLTIVGG 300

Query: 301 VLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHAS 349
           VLYQQSVTG G+AP+QR+P VSKQ D EN   DF  E+Q K + GK A+
Sbjct: 301 VLYQQSVTGAGSAPSQRDPAVSKQTDGEN-DGDFDDENQAKGISGKLAA 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443123|ref|XP_004139330.1| PREDICTED: GDP-mannose transporter GONST4-like [Cucumis sativus] gi|449509466|ref|XP_004163597.1| PREDICTED: GDP-mannose transporter GONST4-like [Cucumis sativus]

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/328 (83%), Positives = 296/328 (90%), Gaps = 1/328 (0%)

Query: 1   MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWV 60
           MSSIR D TKQY+TTSGLV+GYALCSSLLAVINKFAITKFNYPGLLTALQYLTSA+GVW+
Sbjct: 1   MSSIRVD-TKQYFTTSGLVIGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSAVGVWI 59

Query: 61  LGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120
           LGK GFLHHDPFT+ TAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRS TPLLVA+A
Sbjct: 60  LGKLGFLHHDPFTYATAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSCTPLLVAIA 119

Query: 121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHM 180
           DT FR QPCPS+LTF SLVIILGGAVGYVATDS FTLTAYSWAFAYLVTITTEMVYIKHM
Sbjct: 120 DTMFRNQPCPSKLTFGSLVIILGGAVGYVATDSAFTLTAYSWAFAYLVTITTEMVYIKHM 179

Query: 181 VTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240
           VT+LGLNTWGFVLYNNL+SLI++P FWF+TGEY +VF+ L +S G WF  D FFAV+LSC
Sbjct: 180 VTHLGLNTWGFVLYNNLISLILAPVFWFITGEYVDVFSTLGSSGGDWFEYDAFFAVSLSC 239

Query: 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGG 300
           VFG LISFFGFAARKAISATAFTVTGVVNKFLTV INV IWDKHA+PFGL+CLL TI+GG
Sbjct: 240 VFGFLISFFGFAARKAISATAFTVTGVVNKFLTVAINVFIWDKHANPFGLVCLLFTISGG 299

Query: 301 VLYQQSVTGPGAAPAQREPTVSKQNDTE 328
           VLYQQSVTG G+AP+  +      ND E
Sbjct: 300 VLYQQSVTGAGSAPSSADKPTGNDNDPE 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576944|ref|XP_002529357.1| GDP-mannose transporter, putative [Ricinus communis] gi|223531177|gb|EEF33024.1| GDP-mannose transporter, putative [Ricinus communis]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 265/333 (79%), Positives = 294/333 (88%), Gaps = 7/333 (2%)

Query: 1   MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWV 60
           MSSIR DS+KQ   TS LV+GYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVW+
Sbjct: 1   MSSIRVDSSKQL-ATSSLVLGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWI 59

Query: 61  LGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120
            GK GFLHHD F+++TAKKFLPAA VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA+A
Sbjct: 60  FGKLGFLHHDAFSYETAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIA 119

Query: 121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHM 180
           DT FR+QP PS+LTFLSL IILGGAVGYVATDS FTLTAYSWAFAYLVTIT+EMVYIKH+
Sbjct: 120 DTMFRKQPIPSKLTFLSLFIILGGAVGYVATDSAFTLTAYSWAFAYLVTITSEMVYIKHI 179

Query: 181 VTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240
           V+N+GLNTWG V YNNLLSL+I+P FW LTGEY EVFAAL ++ G+WF  D F AV+LSC
Sbjct: 180 VSNVGLNTWGLVYYNNLLSLMIAPVFWVLTGEYSEVFAALGSNGGNWFKFDAFSAVSLSC 239

Query: 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGG 300
           VFGL ISFFGFAAR+AISATAFTVTGVVNKFLTVVINVLIWDKHA+PFGL+CLL T++GG
Sbjct: 240 VFGLAISFFGFAARRAISATAFTVTGVVNKFLTVVINVLIWDKHATPFGLLCLLFTLSGG 299

Query: 301 VLYQQSVTGPGAAPAQREPTVSKQNDTENPSDD 333
           V+YQQSVT  G  P      V+KQ D++N  D+
Sbjct: 300 VVYQQSVTRTGNEP------VNKQADSKNDGDE 326

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297726799|ref|NP_001175763.1| Os09g0314333 [Oryza sativa Japonica Group] gi|50726385|dbj|BAD33996.1| integral membrane protein-like [Oryza sativa Japonica Group] gi|255678762|dbj|BAH94491.1| Os09g0314333 [Oryza sativa Japonica Group]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/341 (75%), Positives = 283/341 (82%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           KQYY TS LV+GYALCSSLLA+INK+A+TKF YP LLTALQYLTSA GVW+LGK GFL H
Sbjct: 3   KQYYATSSLVIGYALCSSLLAIINKYAVTKFGYPALLTALQYLTSAGGVWILGKLGFLCH 62

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPF  + AKKF PAA VFYLAIFTNTNLL HANVDTFIVFRSLTPLLVA+ADTAFR+QPC
Sbjct: 63  DPFNLENAKKFAPAAIVFYLAIFTNTNLLYHANVDTFIVFRSLTPLLVAIADTAFRKQPC 122

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS+LTFLSLV+ILGGAVGYV TDS F+LTAYSWA AYLV ITTEMVYIKH+VTNLGLNTW
Sbjct: 123 PSKLTFLSLVVILGGAVGYVITDSAFSLTAYSWALAYLVIITTEMVYIKHIVTNLGLNTW 182

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNNLLSL+++PFFWFLTGEY  +F A+ +    WF  D F AVALSCVFGLLISFF
Sbjct: 183 GFVLYNNLLSLMMAPFFWFLTGEYKSLFTAIESRGERWFQVDAFVAVALSCVFGLLISFF 242

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFA RKAISATAFTVTGVVNKFLTV INVLIWDKH+SPFGLICLL TIAGGVLYQQSVT 
Sbjct: 243 GFATRKAISATAFTVTGVVNKFLTVAINVLIWDKHSSPFGLICLLFTIAGGVLYQQSVTK 302

Query: 310 PGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHASA 350
            G    Q EP  S+Q   +N   +   E Q      K ++A
Sbjct: 303 KGITAPQHEPESSEQTKDDNEGIELDEEKQSLVPTSKSSNA 343

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514101|gb|AFK45112.1| unknown [Medicago truncatula]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/343 (77%), Positives = 294/343 (85%), Gaps = 9/343 (2%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           +Q+Y TSGLV+GYALCSSLLA+INK+AIT+FNYPGLLTALQYLTS+LGV++LGK GFLHH
Sbjct: 8   QQHYATSGLVIGYALCSSLLAIINKYAITQFNYPGLLTALQYLTSSLGVYLLGKLGFLHH 67

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPFT   AKKF PAA VF+LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFR QP 
Sbjct: 68  DPFTIPIAKKFFPAALVFFLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRGQPS 127

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS  TFLSLV+IL GAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV +LGLNTW
Sbjct: 128 PSNFTFLSLVVILAGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVMSLGLNTW 187

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNN+LSL+I+P FWFLTGE  EVF AL +S+GS F  + F AV+LSCVFGLLISFF
Sbjct: 188 GFVLYNNVLSLMIAPVFWFLTGENFEVFTALRSSSGSLFDVNAFLAVSLSCVFGLLISFF 247

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAARKA+SATAFTVTGVVNKFLTV INV IWDKHASP GL+CLL TI GGVLYQQSVTG
Sbjct: 248 GFAARKAVSATAFTVTGVVNKFLTVAINVTIWDKHASPAGLVCLLFTIIGGVLYQQSVTG 307

Query: 310 PGAAPAQREPTVSKQNDTENP---SDDFGGEDQGKSLLGKHAS 349
            G   +Q+   V+KQ+D E+      D   E +GK   GKHAS
Sbjct: 308 SG---SQQAVVVTKQSDVESSLVGDGDSEVESEGK---GKHAS 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125560515|gb|EAZ05963.1| hypothetical protein OsI_28203 [Oryza sativa Indica Group]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/330 (77%), Positives = 282/330 (85%), Gaps = 1/330 (0%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           KQ Y TS LV+GYALCSSLLA+INK+AITKF+YPGLLTALQYLTS  GVW LGK G L+H
Sbjct: 3   KQAYATSSLVIGYALCSSLLAIINKYAITKFSYPGLLTALQYLTSVAGVWTLGKLGLLYH 62

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPF   TAKKF PAA VFYLAIFTNT+LL+HANVDTFIVFRSLTPLLVA+ADTAFR+QPC
Sbjct: 63  DPFNLQTAKKFAPAALVFYLAIFTNTHLLKHANVDTFIVFRSLTPLLVAIADTAFRKQPC 122

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS+LTF+SLV ILGGAVGYV TDSGF+LTAYSWA AYLVTITTEMVYIKHMVT LGLNTW
Sbjct: 123 PSKLTFVSLVTILGGAVGYVMTDSGFSLTAYSWAVAYLVTITTEMVYIKHMVTKLGLNTW 182

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNNLLSLII+P FWFLTGE+  VF A+ +   SWF  D F AV+LSCVFGLLISFF
Sbjct: 183 GFVLYNNLLSLIIAPVFWFLTGEHLSVFRAIESRGQSWFELDAFVAVSLSCVFGLLISFF 242

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAARKAISATAFTVTGVVNKFLTV INV+IWDKHAS FGL+CLL T+AGGVLYQQSVT 
Sbjct: 243 GFAARKAISATAFTVTGVVNKFLTVAINVMIWDKHASSFGLVCLLFTLAGGVLYQQSVTS 302

Query: 310 PGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            G +  QRE  V+KQ   +N + +   E Q
Sbjct: 303 KGNSSVQREA-VAKQGKADNDTAELDEEKQ 331

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115475261|ref|NP_001061227.1| Os08g0203900 [Oryza sativa Japonica Group] gi|38636757|dbj|BAD03001.1| putative integral membrane protein [Oryza sativa Japonica Group] gi|40253389|dbj|BAD05319.1| putative integral membrane protein [Oryza sativa Japonica Group] gi|113623196|dbj|BAF23141.1| Os08g0203900 [Oryza sativa Japonica Group] gi|215715371|dbj|BAG95122.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 257/330 (77%), Positives = 282/330 (85%), Gaps = 1/330 (0%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           KQ Y TS LV+GYALCSSLLA+INK+AITKF+YPGLLTALQYLTS  GVW LGK G L+H
Sbjct: 3   KQAYATSSLVIGYALCSSLLAIINKYAITKFSYPGLLTALQYLTSVAGVWTLGKLGLLYH 62

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPF   TAKKF PAA VFYLAIFTNT+LL+HANVDTFIVFRSLTPLLVA+ADTAFR+QPC
Sbjct: 63  DPFNLQTAKKFAPAALVFYLAIFTNTHLLKHANVDTFIVFRSLTPLLVAIADTAFRKQPC 122

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS+LTF+SLV ILGGAVGYV TDSGF+LTAYSWA AYLVTITTEMVYIKHMVT LGLNTW
Sbjct: 123 PSKLTFVSLVTILGGAVGYVMTDSGFSLTAYSWAVAYLVTITTEMVYIKHMVTKLGLNTW 182

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNNLLSLII+P FWFLTGE+  VF A+ +   SWF  D F AV+LSCVFGLLISFF
Sbjct: 183 GFVLYNNLLSLIIAPVFWFLTGEHLSVFRAIESRGQSWFELDAFVAVSLSCVFGLLISFF 242

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAARKAISATAFTVTGVVNKFLTV INV+IWDKHAS FGL+CLL T+AGGVLYQQSVT 
Sbjct: 243 GFAARKAISATAFTVTGVVNKFLTVAINVMIWDKHASSFGLVCLLFTLAGGVLYQQSVTL 302

Query: 310 PGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            G +  QRE  V+KQ   +N + +   E Q
Sbjct: 303 KGNSSVQREA-VAKQGKADNDTAELDEEKQ 331

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242048866|ref|XP_002462177.1| hypothetical protein SORBIDRAFT_02g021040 [Sorghum bicolor] gi|241925554|gb|EER98698.1| hypothetical protein SORBIDRAFT_02g021040 [Sorghum bicolor]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/330 (76%), Positives = 282/330 (85%), Gaps = 1/330 (0%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           KQYY TS LVVGYALCSSLL++INK+A+TKF YPGLLTALQYLTSA GVW+LGK GFL H
Sbjct: 3   KQYYATSSLVVGYALCSSLLSIINKYAVTKFGYPGLLTALQYLTSAGGVWILGKLGFLTH 62

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPF  +TAKKF PAA VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA+ADT FR+QPC
Sbjct: 63  DPFNLETAKKFAPAALVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTTFRKQPC 122

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS+ TFLSLV+ILGGAVGYV TDS F++TAYSWA AYLVTITTEMVYIKH+VTNLGLNTW
Sbjct: 123 PSKFTFLSLVVILGGAVGYVMTDSAFSITAYSWALAYLVTITTEMVYIKHIVTNLGLNTW 182

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNN LSL+++P FWFLTGE+  VFAA+ +    WF  D F AVALSCVFGLLISFF
Sbjct: 183 GFVLYNNFLSLMLAPIFWFLTGEHKSVFAAMESRGEGWFHLDAFVAVALSCVFGLLISFF 242

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAAR+A+SATAFTVTGVVNKFLTV INV+IWDKHA+ +GL+CLL TI GGVLYQQSVT 
Sbjct: 243 GFAARRAVSATAFTVTGVVNKFLTVAINVMIWDKHATAYGLVCLLFTIVGGVLYQQSVTV 302

Query: 310 PGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            G + AQRE  V +Q    N S +F  E Q
Sbjct: 303 KGNSAAQRE-LVPEQPKEGNDSKEFDEEKQ 331

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477871|ref|XP_003609221.1| GDP-mannose transporter [Medicago truncatula] gi|355510276|gb|AES91418.1| GDP-mannose transporter [Medicago truncatula]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/342 (76%), Positives = 292/342 (85%), Gaps = 6/342 (1%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           +Q+Y TSGLV+GYALCSSLLA+INK+AIT+FNYPGLLTALQYLTS+LGV++LGK GFLHH
Sbjct: 8   QQHYATSGLVIGYALCSSLLAIINKYAITQFNYPGLLTALQYLTSSLGVYLLGKLGFLHH 67

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPFT   AKKF PAA VF+LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFR QP 
Sbjct: 68  DPFTIPIAKKFFPAALVFFLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRGQPS 127

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS  TFLSLV+IL GAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV +LGLNTW
Sbjct: 128 PSNFTFLSLVVILAGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVMSLGLNTW 187

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNN+LSL+I+P FWFLTGE  EVF AL +S+GS F  + F AV+LSCVFGLLISFF
Sbjct: 188 GFVLYNNVLSLMIAPVFWFLTGENFEVFTALRSSSGSLFDVNAFLAVSLSCVFGLLISFF 247

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAARKA+SATAFTVTGVVNKFLTV INV IWDKHASP GL+CLL TI GGVLYQQSVTG
Sbjct: 248 GFAARKAVSATAFTVTGVVNKFLTVAINVTIWDKHASPAGLVCLLFTIIGGVLYQQSVTG 307

Query: 310 PGAAPAQREPTVSKQNDTENP---SDDFGGEDQGKSLLGKHA 348
            G   +Q+   V+KQ+D E+      D   E +GK+ L   +
Sbjct: 308 SG---SQQAVVVTKQSDVESSLVGDGDSEVESEGKAELAGQS 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326502916|dbj|BAJ99086.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/330 (76%), Positives = 279/330 (84%)

Query: 10  KQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHH 69
           KQ+Y TS LV+GYALCSSLLA+INK+A+TKFNYPGLLTALQYLTSA GVW LGK GFL H
Sbjct: 3   KQHYATSSLVIGYALCSSLLAIINKYAVTKFNYPGLLTALQYLTSAAGVWALGKLGFLCH 62

Query: 70  DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129
           DPF  +TAKKF PAA VFYLAIFTNTNLL HANVDTFIVFRSLTPLLVA+ADT FR+QPC
Sbjct: 63  DPFNLETAKKFAPAAVVFYLAIFTNTNLLVHANVDTFIVFRSLTPLLVAIADTTFRKQPC 122

Query: 130 PSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
           PS+LTF SLVIILGGAVGYV TDS F+LTAYSWA AYLVTIT EMVYIKH+VTNLGLNTW
Sbjct: 123 PSKLTFSSLVIILGGAVGYVITDSAFSLTAYSWALAYLVTITAEMVYIKHIVTNLGLNTW 182

Query: 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249
           GFVLYNNLLSL+ISP FWFLTGE+  VF+A+ +    WF  D F AVALSC+FGLLISFF
Sbjct: 183 GFVLYNNLLSLMISPIFWFLTGEHKSVFSAVESRGEGWFQLDAFVAVALSCLFGLLISFF 242

Query: 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309
           GFAARKAISATAFTVTGVVNKFLTV INV IWDKHAS FGL+ LL T+AGGVLYQQSVT 
Sbjct: 243 GFAARKAISATAFTVTGVVNKFLTVAINVTIWDKHASAFGLVSLLFTLAGGVLYQQSVTA 302

Query: 310 PGAAPAQREPTVSKQNDTENPSDDFGGEDQ 339
            G   + +  T ++Q   E+ S ++  E Q
Sbjct: 303 KGNIASAQHETTTEQPKDESASAEYDEEKQ 332

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2147655	341	GONST4 "golgi nucleotide sugar	0.968	0.994	0.742	5.9e-128
TAIR|locus:2014634	372	GONST3 "golgi nucleotide sugar	0.862	0.811	0.524	1.8e-80
TAIR|locus:2124819	323	UTr7 "UDP-galactose transporte	0.794	0.860	0.264	1.1e-18
TAIR|locus:2054090	333	GONST1 "AT2G13650" [Arabidopsi	0.808	0.849	0.233	1.6e-15
CGD|CAL0002875	371	VRG4 [Candida albicans (taxid:	0.854	0.805	0.217	8.4e-14
UNIPROTKB|Q5A477	371	VRG4 "GDP-mannose transporter"	0.854	0.805	0.217	8.4e-14
POMBASE|SPAC144.18	345	vrg4 "Golgi GDP-mannose transp	0.854	0.866	0.232	1.4e-13
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.794	0.727	0.217	1.6e-13
DICTYBASE|DDB_G0277007	368	DDB_G0277007 "GDP-fucose trans	0.805	0.766	0.239	9.5e-13
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.76	0.847	0.238	1.5e-12

TAIR|locus:2147655 GONST4 "golgi nucleotide sugar transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1256 (447.2 bits), Expect = 5.9e-128, P = 5.9e-128
 Identities = 259/349 (74%), Positives = 288/349 (82%)

Query:     1 MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWV 60
             MSS RFDS KQ  TTS LV+GYALCSSLLAVINK AIT FNYPGLLTALQYLT  + V++
Sbjct:     1 MSSSRFDSNKQL-TTSSLVIGYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYL 59

Query:    61 LGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120
             LGK G ++HDPFT+DTAKKFLPAA VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA+A
Sbjct:    60 LGKSGLINHDPFTWDTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIA 119

Query:   121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHM 180
             DT FR QP PSRLTFLSLV+IL GAVGYVATDS FTLTAYSWA AYLVTITTEMVYIKHM
Sbjct:   120 DTVFRSQPLPSRLTFLSLVVILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHM 179

Query:   181 VTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240
             V+N+ LN WG VLYNNLLSL+I+P FWFLTGE+ EVFAAL  + G+ F P  F +VA SC
Sbjct:   180 VSNIKLNIWGLVLYNNLLSLMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASC 239

Query:   241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGG 300
             VFG LIS+FGFAAR AISATAFTVTGVVNKFLTVVINVLIWDKHA+P GL+CLL TI GG
Sbjct:   240 VFGFLISYFGFAARNAISATAFTVTGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGG 299

Query:   301 VLYQQSVTGPGAAPAQREPTVSKQNDTENPSDDFGGEDQGKSLLGKHAS 349
             V YQQSV      P ++   VS++ D+E   +D   E+  + + GK AS
Sbjct:   300 VGYQQSVKLD--KPIEK---VSEK-DSEKGEED---EELTQLVPGKLAS 339

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

TAIR|locus:2014634 GONST3 "golgi nucleotide sugar transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 159/303 (52%), Positives = 207/303 (68%)

Query:    17 GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
             G+  GY L +SLL++INK+AI KF YPG LTA+QY TSA GV +  +   + HD     T
Sbjct:    37 GVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLT 96

Query:    77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL 136
               +FLPAA +FYL++FTN+ LL HANVDTFIVFRS  P+ VA+ +T F  QP PS  T+ 
Sbjct:    97 MWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWG 156

Query:   137 SLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNN 196
             SL  I GG++ YV TD  FT+ AYSWA AYLV++T + VYIKH+V  +GLNTWG VLYNN
Sbjct:   157 SLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNN 216

Query:   197 LLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKA 256
             L +L++ P    + GE  ++   +      W+   V   V LSC+FGL ISFFGF+ R+A
Sbjct:   217 LEALLLFPLELLIMGELKKIKHEITDET-DWYSLQVVLPVGLSCLFGLAISFFGFSCRRA 275

Query:   257 ISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAPAQ 316
             ISAT FTV G+VNK LTVVIN+++WDKH++  G + LLV + GGV+YQQS      A  +
Sbjct:   276 ISATGFTVLGIVNKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQE 335

Query:   317 REP 319
              +P
Sbjct:   336 AKP 338

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

TAIR|locus:2124819 UTr7 "UDP-galactose transporter 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 76/287 (26%), Positives = 128/287 (44%)

Query:    20 VGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKK 79
             V Y + S  +  INK  I ++ +   +  LQ L ++L +    + G+         TAKK
Sbjct:    19 VSYGIASMAMVFINKAVIMQYPHSMTVLTLQQLATSLLIHFGRRMGYTRAKGIDMATAKK 78

Query:    80 FLPAAFVFYLA--IFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLS 137
              LP + +FY A   F   +L +  N+  +I  + LTPL V ++   F +   P+    LS
Sbjct:    79 LLPVS-IFYNANVAFALASL-KGVNIPMYIAIKRLTPLAVLISGVLFGKGK-PTTQVALS 135

Query:   138 LVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNL 197
             +++   G V     D  F L  Y  A   +   T  +V ++      GL++   + YN+ 
Sbjct:   136 VLLTAAGCVIAALGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSSIEIMFYNSF 195

Query:   198 LSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAI 257
             LSL        +TGE+    + L+A     ++P +   + LS V G++++F  F      
Sbjct:   196 LSLPFLSILIIVTGEFPNSLSLLLAKCS--YLPFLVILI-LSLVMGIVLNFTMFLCTIVN 252

Query:   258 SATAFTVTGVVNKFLTVVIN-VLIWDKHASPFGLICLLVTIAGGVLY 303
             SA   T+ GV+    +  +  VL+         +  L+V  AGGV Y
Sbjct:   253 SALTTTIVGVLKGVGSTTLGFVLLGGVEVHALNVSGLVVNTAGGVWY 299

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0048527 "lateral root development" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

TAIR|locus:2054090 GONST1 "AT2G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 70/300 (23%), Positives = 133/300 (44%)

Query:    16 SGLVVGYALCSSLLAVINKFAITKFNY-PGLLTAL-QYLTSALGVWVLGKFGFLHHDPFT 73
             SGL    + CS +L  +NKF ++ +N+  G+   L Q   S + V  L   G +  +P T
Sbjct:    36 SGLAYCISSCSMIL--VNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query:    74 FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRL 133
                 K + P   +F   + T+   L++ NV    V +++T ++ A+ +     +   +R+
Sbjct:    94 LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRV 153

Query:   134 TFLSLVIILGGAVGYVATDSGFTLTAYSWAFA-------YLVTITTEMVYIKHMVTNLGL 186
              + +L +++  AV    TD  F    Y+W  A       Y +T+   M   K +  +  L
Sbjct:   154 -WAALFLMIISAVSGGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNL 212

Query:   187 NTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLI 246
             N +  VL NN LSL +     +   E   ++   +       +P  +  + LS + GL I
Sbjct:   213 NEFSMVLLNNTLSLPLGLLLSYFFNEMDYLYQTPLLR-----LPSFWMVMTLSGLLGLAI 267

Query:   247 SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306
             SF          AT +++ G +NK    +  +++++   S      +L  +  GV++ ++
Sbjct:   268 SFTSMWFLHQTGATTYSLVGSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARA 327

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI;IDA;IMP

CGD|CAL0002875 VRG4 [Candida albicans (taxid:5476)]

 Score = 201 (75.8 bits), Expect = 8.4e-14, P = 8.4e-14
 Identities = 68/313 (21%), Positives = 135/313 (43%)

Query:    19 VVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
             +  Y L S L+ V NK+ ++   FN    L A+Q +   + +  L     + +  F  D 
Sbjct:    60 IAAYCLSSILMTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDE 119

Query:    77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL 136
             AKK+ P AF+    I+T++  L++ ++  + +F++LT +L+A  +  +      +     
Sbjct:   120 AKKWSPIAFLLVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSS 179

Query:   137 SLVIILGGAVGYVAT-------DSGFTL-TAYSWAFAYLVTITTEMVYIKHMVTNLGLNT 188
              L+++L   + Y          D  F L   Y W           ++ ++  +       
Sbjct:   180 FLLMVLSSVIAYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMRKRIKLTNFKD 239

Query:   189 WGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISF 248
             +  + YNNLLS+ I     F+  ++     +L   A +        A+ LS    + IS+
Sbjct:   240 FDTMYYNNLLSIPILLICSFIFEDWSSANVSLNFPADNRVT--TITAMILSGASSVGISY 297

Query:   249 FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLIC-LLVTIAGGVLYQQSV 307
                   +  S+T +++ G +NK L + ++ LI+ + A  F  +  + V    G++Y  + 
Sbjct:   298 CSAWCVRVTSSTTYSMVGALNK-LPIALSGLIFFEAAVNFWSVSSIFVGFGAGLVYAVAK 356

Query:   308 TGPGAAPAQREPT 320
                    +Q+ PT
Sbjct:   357 QKQQKEQSQQLPT 369

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

GO:0006486 "protein glycosylation" evidence=IMP

GO:0005739 "mitochondrion" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

UNIPROTKB|Q5A477 VRG4 "GDP-mannose transporter" [Candida albicans SC5314 (taxid:237561)]

 Score = 201 (75.8 bits), Expect = 8.4e-14, P = 8.4e-14
 Identities = 68/313 (21%), Positives = 135/313 (43%)

Query:    19 VVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
             +  Y L S L+ V NK+ ++   FN    L A+Q +   + +  L     + +  F  D 
Sbjct:    60 IAAYCLSSILMTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDE 119

Query:    77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL 136
             AKK+ P AF+    I+T++  L++ ++  + +F++LT +L+A  +  +      +     
Sbjct:   120 AKKWSPIAFLLVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSS 179

Query:   137 SLVIILGGAVGYVAT-------DSGFTL-TAYSWAFAYLVTITTEMVYIKHMVTNLGLNT 188
              L+++L   + Y          D  F L   Y W           ++ ++  +       
Sbjct:   180 FLLMVLSSVIAYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMRKRIKLTNFKD 239

Query:   189 WGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISF 248
             +  + YNNLLS+ I     F+  ++     +L   A +        A+ LS    + IS+
Sbjct:   240 FDTMYYNNLLSIPILLICSFIFEDWSSANVSLNFPADNRVT--TITAMILSGASSVGISY 297

Query:   249 FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLIC-LLVTIAGGVLYQQSV 307
                   +  S+T +++ G +NK L + ++ LI+ + A  F  +  + V    G++Y  + 
Sbjct:   298 CSAWCVRVTSSTTYSMVGALNK-LPIALSGLIFFEAAVNFWSVSSIFVGFGAGLVYAVAK 356

Query:   308 TGPGAAPAQREPT 320
                    +Q+ PT
Sbjct:   357 QKQQKEQSQQLPT 369

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IMP

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

POMBASE|SPAC144.18 vrg4 "Golgi GDP-mannose transporter Vrg4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 76/327 (23%), Positives = 146/327 (44%)

Query:    19 VVGYALCSSLLAVINKFAITK--FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
             VV Y + S L+ + NK+ ++   +N   LL  +Q       + +L +   +++  F F  
Sbjct:    17 VVSYCMASILMTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGILKRLKVINYRDFDFRE 76

Query:    77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL 136
             AK + P +F+    I+T +  L+  +V  + +F++LT +++A  +  +      + LT  
Sbjct:    77 AKFWFPISFLLVAMIYTASKALQFLSVPVYTIFKNLTIIIIAYGEVLWFGGHVTA-LTLF 135

Query:   137 SL-VIILGGAVGYVAT--DSGF---TLTA-YSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189
             S  +++L   V   A    S F   TL + Y W     +T    ++ ++  +       +
Sbjct:   136 SFGLMVLSSIVAAWADIQSSSFASQTLNSGYLWMVLNCLTNAAFVLAMRKRIKLTNFRDF 195

Query:   190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPD----VFFAVALSCVFGLL 245
               + YNNLLS+ +       T ++    A  +A     F PD    V  A+A+S V  + 
Sbjct:   196 DTMFYNNLLSIPVLVICTLFTEDWS---AENIAQN---FPPDAKFGVLMAMAISGVSSVG 249

Query:   246 ISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLI-CLLVTIAGGVLYQ 304
             IS+      +  S+T +++ G +NK    +  ++ +D   + FG +  +L+    GV+Y 
Sbjct:   250 ISYTSAWCVRVTSSTTYSMVGALNKLPLAIAGLVFFDAPIT-FGSVTAILLGFISGVVY- 307

Query:   305 QSVTGPGAAPAQREP-TVSKQNDTENP 330
                        Q++P T+     T NP
Sbjct:   308 --AVAKSQQQRQKDPATILPM--THNP 330

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 199 (75.1 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 64/294 (21%), Positives = 132/294 (44%)

Query:    12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH-HD 70
             +Y +   + G A+   LL V+  +  +  N+   L   Q + + + + +L  F  L  + 
Sbjct:    95 FYKSPRFLSGGAV---LLYVMTTYDFSASNF---LLFNQMVVTIVILHILKHFNILKINT 148

Query:    71 PFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCP 130
              F  +T KK +P +F + + +    + L+  N+  +   + L  +++ + +    ++  P
Sbjct:   149 NFEKETIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSP 208

Query:   131 SRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWG 190
              ++    +V+++G  V  + TD  F    YS      +   + ++Y+K + +N+  +T+ 
Sbjct:   209 PKIIASVVVMVIGAVVAGI-TDLSFNSLGYSLVLLSCIFQASYLIYVKKVASNM--STYD 265

Query:   191 FVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFG 250
              + YN++LSL I+ F   +  E  E F        S F    +F   LS   G  ++F  
Sbjct:   266 MLYYNSVLSLPITIFLMIVNQEI-EYFQTFEHLYDSSF--QAYFI--LSIFLGFFLNFCI 320

Query:   251 FAARKAISATAFTVTGVVNKFLTVVINVLIW-DKHASPFGLICLLVTIAGGVLY 303
             F      S    +VTG V    + +I  +++ D    P  ++ L++ I G + Y
Sbjct:   321 FFCTSVNSPLTTSVTGQVKNIASTIIGAMVFNDIIIHPINILGLIINIIGSIWY 374

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

DICTYBASE|DDB_G0277007 DDB_G0277007 "GDP-fucose transporter" [Dictyostelium discoideum (taxid:44689)]

 Score = 192 (72.6 bits), Expect = 9.5e-13, P = 9.5e-13
 Identities = 72/301 (23%), Positives = 120/301 (39%)

Query:    14 TTSGLVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFG------ 65
             T + ++  Y   S  L  +NK  ++  KF YP  +T  Q + S + ++++          
Sbjct:    66 TIASVIAFYFFISISLVFLNKILLSDFKFEYPLFITWYQQIISFVSIYIMTSISKSVPAL 125

Query:    66 -FLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAF 124
              FL    F   TA K LP   V    +  N   L +  V  + V RSLT     +     
Sbjct:   126 SFLPEFEFKSATASKVLPVTAVLTGMVIFNNLCLEYVEVSFYQVARSLTICFSLILTYIV 185

Query:   125 RRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNL 184
              +     R T   LV+ LG  +G  A +  F+     +       +    + +K ++  +
Sbjct:   186 LKSKTSYRATMACLVVFLGFVLGS-AGEVNFSWLGIIFGLLSSFFVALYSIAVKRVLPAV 244

Query:   185 GLNTWGFVLYNNLLSL-IISPFFWFLTGEYGEVF-AALVASAGSWFVPDVFFAVALSCVF 242
               N W   +YN  +S+ +I P    ++GE   +    L+ S   WF    +  VA   + 
Sbjct:   245 DGNEWRLSIYNTAISIGLIFPLI-LVSGEANTILDEPLLYSGTFWF----YMTVA--GLM 297

Query:   243 GLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVL 302
             G LIS   F   K  S    T++G V   +  ++ V+ W    S    + +L+ I G   
Sbjct:   298 GYLISISVFMQIKHTSPLTNTISGTVKACVQTILAVVFWGNPISTQNAVGILLVIGGSFW 357

Query:   303 Y 303
             Y
Sbjct:   358 Y 358

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 188 (71.2 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 67/281 (23%), Positives = 116/281 (41%)

Query:    18 LVVGYALCSSLLAVINKFAITK--FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFD 75
             + V Y + S  +   NK  +    FN+   LT  Q + S   +  +  FG++ +  F  D
Sbjct:    16 VAVAYGVTSVSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYPDFNLD 75

Query:    76 TAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTF 135
               KK    + +F L + +    L   NV  F   R L+ L+V + +     +  P+    
Sbjct:    76 LCKKLASLSLLFILMVISGLAALAKTNVPLFSALRRLSTLIVIVGEGFLLGKVTPTDEVQ 135

Query:   136 LSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYN 195
               +V++LG  +  +  D+ F      +           ++YI        LNT+G + Y 
Sbjct:   136 SVVVMVLGALIAGLG-DATFDFVGSIYILFNCFVTAGYLIYIAKKTKETQLNTFGLMFYC 194

Query:   196 NLLSLIISPFFWFLTGEYG-EVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAAR 254
             N+LSL  +    F+T   G   F     + G  F    FF   +S +   L+++F F   
Sbjct:   195 NILSLPATIILTFITEWEGISTFEGY-GNIGFQFC---FF---MSSIQAFLLNYFIFLCS 247

Query:   255 KAISATAFTVTGVVNKFLTVVINVLIW-DKHASP---FGLI 291
                S    ++TG +   L  +I + ++ D   +P   FGLI
Sbjct:   248 TMNSPLTTSITGQIKSILQTIIGLFMFGDVIITPLLSFGLI 288

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84L08	GONS4_ARATH	No assigned EC number	0.7363	0.9685	0.9941	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016826001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (349 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	1e-13
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	4e-06
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-05

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 70.3 bits (172), Expect = 1e-13
 Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 17/293 (5%)

Query: 19  VVGYALCSSLLAVINKFAITK--FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDT 76
            + Y   S L+ + NK+ ++   FN   LL A+Q L   +G+ +L     +    F    
Sbjct: 11  SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTK 67

Query: 77  AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSR---- 132
           AKK+ P +F+  + I+T++  L++  V  + +F++LT +L+A  +  F      S     
Sbjct: 68  AKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLS 127

Query: 133 --LTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWG 190
             L  LS V+   G     A  +      Y W F   ++    ++ ++  +       + 
Sbjct: 128 FILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFD 187

Query: 191 FVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFG 250
            + YNNLLSL I   F FL  ++     A      +    D   A+ +S +  + IS+  
Sbjct: 188 TMFYNNLLSLPILLSFSFLFEDWSPGNLA------NNLSVDSLMAMFISGLCSVGISYCS 241

Query: 251 FAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303
               +  S+T +++ G +NK    +  ++ +D   +   +  +L+    G +Y
Sbjct: 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294

Length = 309

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 8/280 (2%)

Query: 30  AVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYL 89
            + NK  +  F YP   T +     +L   +    G       +    K  LP A V  +
Sbjct: 18  NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTI 77

Query: 90  AIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149
              T+   L    V      +++ P    +    F  Q  PS   +LSL+ I+GG     
Sbjct: 78  GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPS-TLWLSLLPIVGGVALAS 136

Query: 150 ATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFL 209
            T+  F    +  A    +T  +  ++ K  +T   L+      Y +++SL +     F+
Sbjct: 137 DTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFI 196

Query: 210 TGEY----GEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVT 265
           T            A+     +        A      F        F     +S    +V 
Sbjct: 197 TEGPPFLPHGFMQAISGVNVTKIYTVSLVAA---MGFFHFYQQVAFMLLGRVSPLTHSVG 253

Query: 266 GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305
             + + + +V+++L +    SP  +    + IAG  LY +
Sbjct: 254 NCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 27/278 (9%)

Query: 41  NYPGLLTALQYLTSAL-GVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLR 99
            +  LLT  Q+L  +L G+  L  F  L          K ++     F+L+   N   L+
Sbjct: 30  PFGNLLTFAQFLFISLVGLLYLLLFKKLKPRK---IPLKTYVLIVATFFLSSVLNNEALK 86

Query: 100 HANVDTFIVFRSLTPLLVALADTAFRRQPCPSR----LTFLSLVIIL-------GGAVGY 148
           + +  T ++F+S   + V +       +   S        ++L +I+             
Sbjct: 87  YISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSK 146

Query: 149 VATDS---GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPF 205
           + T S   G  L   +     L   T E +Y K+     G ++   + Y++LLSL     
Sbjct: 147 LTTFSDNVGIALLFGALLMDALTGNTQEKLYKKY-----GKHSKEMMFYSHLLSLPFFLL 201

Query: 206 FWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVT 265
                       A           P V F + L+ +   +  FF F       A   T+ 
Sbjct: 202 GLLDIRTGLLFSAESFCLR----HPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLV 257

Query: 266 GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303
             + KF++++++VL++    +    +  L+   G  LY
Sbjct: 258 TTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLY 295

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
KOG1580	337	consensus UDP-galactose transporter related protei	99.91
KOG1581	327	consensus UDP-galactose transporter related protei	99.9
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.84
KOG1582	367	consensus UDP-galactose transporter related protei	99.82
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.79
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.78
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.77
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.76
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.73
COG2962	293	RarD Predicted permeases [General function predict	99.71
KOG2765	416	consensus Predicted membrane protein [Function unk	99.68
KOG2766	336	consensus Predicted membrane protein [Function unk	99.58
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.35
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.23
COG2510	140	Predicted membrane protein [Function unknown]	99.19
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.12
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.01
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.0
COG2510	140	Predicted membrane protein [Function unknown]	98.92
PRK15430	296	putative chloramphenical resistance permease RarD;	98.81
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.8
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.72
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.71
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.54
PLN00411	358	nodulin MtN21 family protein; Provisional	98.44
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.38
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.35
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.33
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.25
COG2962	293	RarD Predicted permeases [General function predict	98.16
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.1
PRK11272	292	putative DMT superfamily transporter inner membran	98.08
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.02
PRK11689	295	aromatic amino acid exporter; Provisional	97.99
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.85
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.82
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.77
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.74
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.66
PRK13499	345	rhamnose-proton symporter; Provisional	97.62
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.57
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.55
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.49
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.44
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.42
COG2076	106	EmrE Membrane transporters of cations and cationic	97.33
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.26
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.22
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.2
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.17
PRK11431	105	multidrug efflux system protein; Provisional	97.15
COG2076	106	EmrE Membrane transporters of cations and cationic	97.1
PRK11431	105	multidrug efflux system protein; Provisional	97.05
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.97
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.91
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.86
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.84
PRK13499	345	rhamnose-proton symporter; Provisional	96.47
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.46
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.25
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.24
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.77
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.76
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.68
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.58
KOG2765	416	consensus Predicted membrane protein [Function unk	95.55
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.36
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.19
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.99
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.83
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.39
KOG1581	327	consensus UDP-galactose transporter related protei	92.07
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.42
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	90.76
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	90.76
KOG1580	337	consensus UDP-galactose transporter related protei	90.18
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.12
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	88.93
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	88.22
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	87.19
KOG3912	372	consensus Predicted integral membrane protein [Gen	82.05

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=7.2e-38  Score=275.34  Aligned_cols=295  Identities=36%  Similarity=0.541  Sum_probs=268.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH--HHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHH
Q 018843           15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTA--LQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIF   92 (350)
Q Consensus        15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (350)
                      ..+.++.|+++|+.++++||+++++++||-.+..  .|.+.+.+.+..+.+.|..+.|++++++.|+|+|.++++.++++
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~   92 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLF   92 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHH
Confidence            3478999999999999999999998888776555  99999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHH
Q 018843           93 TNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITT  172 (350)
Q Consensus        93 ~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~  172 (350)
                      ++..+++|+++++++++|+.+|+++++.+.+++|+| |++..|.++..+.+|......+|.+++..|+.|++.+.++.+.
T Consensus        93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~  171 (314)
T KOG1444|consen   93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAA  171 (314)
T ss_pred             HccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999 7999999999999999999999999998899999999999999


Q ss_pred             HHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018843          173 EMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFA  252 (350)
Q Consensus       173 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (350)
                      +.++.|+..+..+.+.+++++|+++.+++.++...++.||+.+.    ..+.+.|..+.+|..+..+|+++++++|+.++
T Consensus       172 ~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l----~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~  247 (314)
T KOG1444|consen  172 FVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL----SLNFDNWSDSSVLVVMLLSCVMGFGISYTSFL  247 (314)
T ss_pred             HHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH----HhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988889999999999999999999988889998822    22345677788999999999999999999999


Q ss_pred             HhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCCCC
Q 018843          253 ARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAP  314 (350)
Q Consensus       253 ~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~~~  314 (350)
                      |.+..||++.++++......+.+.+.+++|++.++...+|..+.++|..+|++.+.++++.+
T Consensus       248 ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  248 CTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             HHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            99999999999999555555555555557799999999999999999999999987765443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=9.9e-37  Score=280.36  Aligned_cols=294  Identities=18%  Similarity=0.238  Sum_probs=233.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 018843           15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTN   94 (350)
Q Consensus        15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (350)
                      +.+.+..|+.+|+.++++||++++++++|..++++|+.++.+.+.+.+..+.++.++.++++++.+++.|++......++
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   82 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34567777777999999999999999999999999999998887776544444555678889999999999998888899


Q ss_pred             hhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 018843           95 TNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEM  174 (350)
Q Consensus        95 ~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~  174 (350)
                      +.+++|+++++++++++++|+++++++++++|||. +++++.+++++++|+++...+|.+++..|+++++++++++++|.
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~-~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  161 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF-PSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN  161 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC-cHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999995 89999999999999998876777777889999999999999999


Q ss_pred             HHHHHHhhcCCCCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHH-HHHHHHHHHHH
Q 018843          175 VYIKHMVTNLGLNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCV-FGLLISFFGFA  252 (350)
Q Consensus       175 v~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  252 (350)
                      ++.||..++.+.++++...|+...+.+ ++|+... .++.+............+.....+...+..+. .....+...+.
T Consensus       162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T TIGR00817       162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFI-TEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM  240 (302)
T ss_pred             HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHH-HcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998875567888899999988654 4444433 33222111110000000111122332333333 22333345557


Q ss_pred             HhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          253 ARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       253 ~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      +++++||++.++.++++|++++++|++++||++|+.+++|+++++.|+++|++.|.++
T Consensus       241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~  298 (302)
T TIGR00817       241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK  298 (302)
T ss_pred             HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999999999999999999999999999999999999765543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2.2e-34  Score=268.89  Aligned_cols=292  Identities=19%  Similarity=0.261  Sum_probs=235.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC--hhhhhHHHHHHHHHHH
Q 018843           12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT--FDTAKKFLPAAFVFYL   89 (350)
Q Consensus        12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   89 (350)
                      ...+...++.|+.+|+..++.||++++.+|+|.+++.+|++++.+++.+++..+.++.++++  +++++++++.|++...
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            56666777778888999999999999999999999999999998887776665544444453  3468899999999887


Q ss_pred             HHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHH
Q 018843           90 AIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVT  169 (350)
Q Consensus        90 ~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~  169 (350)
                      .....+.++++++++.++++++++|+++++++++++|||+ +++++.+++++++|+.+...+|.++++.|++++++|+++
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~-s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL-NLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc-cHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            7667789999999999999999999999999999999995 999999999999999999888888888999999999999


Q ss_pred             HHHHHHHHHHHhhcCC-----CCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHH---hcCCCCchhHHHHHHHHH
Q 018843          170 ITTEMVYIKHMVTNLG-----LNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVA---SAGSWFVPDVFFAVALSC  240 (350)
Q Consensus       170 ~a~~~v~~k~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  240 (350)
                      +++|.++.|+..++.+     .++.....++.+.+.+ ++|+....  |..........   +...+.....+..++.++
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~  283 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF--EGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG  283 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            9999999999887543     4454454455666544 44444323  32221111100   011111123344566677


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       241 ~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      +..+..+.+.+.++++++|.++++.+++||++++++|++++||++|+.+++|.++++.|+++|++.
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            778888888889999999999999999999999999999999999999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-34  Score=260.21  Aligned_cols=303  Identities=20%  Similarity=0.305  Sum_probs=259.0

Q ss_pred             CcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCCh-hhhh
Q 018843            2 SSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTF-DTAK   78 (350)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~   78 (350)
                      ++.....++...........|.+++++..+.||++++  +|++|.+++..+..++.+.....+..+..+.++.+. ..++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~   84 (316)
T KOG1441|consen    5 SEPASGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLR   84 (316)
T ss_pred             ccCcccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchH
Confidence            3444555666677777788888889999999999999  899999999999999999999999888777666544 4699


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchH
Q 018843           79 KFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLT  158 (350)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~  158 (350)
                      .+++++++...+.++.|.+++|+|+++++++|+++|+++.++++++.+|++ ++..+++++..+.|+++...+|.++|+.
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~-s~~~~lsL~piv~GV~ias~~e~~fn~~  163 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTY-SSMTYLSLLPIVFGVAIASVTELSFNLF  163 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCC-cceEEEEEEEeeeeEEEeeeccccccHH
Confidence            999999999999999999999999999999999999999999999999996 7888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh--cCCCCcchhHHHHhHHHHHH-H-HHHHHHhccHHHHHHHHHHhcCCCCchhHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVT--NLGLNTWGFVLYNNLLSLII-S-PFFWFLTGEYGEVFAALVASAGSWFVPDVFF  234 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (350)
                      |...++++.+..+++.++.|++.+  +++.++.+.++|+++++..+ + |......++.. .    +.....| +...+.
T Consensus       164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~----~~~~~~~-~~~~~~  237 (316)
T KOG1441|consen  164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V----GFLTAPW-FVTFLI  237 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e----eeecccc-chhhHH
Confidence            999999999999999999999984  66889999999999997543 3 43333222211 0    0011223 333444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843          235 AVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA  312 (350)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~  312 (350)
                      .++.. +++++.|...|++++++||++.++.+.+|.++.++.|+++|+++.|+.|..|+.+.++|+.+|++.|.++++
T Consensus       238 ~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  238 LLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            44444 999999999999999999999999999999999999999999999999999999999999999998887654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.97  E-value=1.6e-30  Score=215.78  Aligned_cols=285  Identities=22%  Similarity=0.389  Sum_probs=253.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 018843           17 GLVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTN   94 (350)
Q Consensus        17 ~~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (350)
                      ..+..|+..|+.|++.||++++  +|++.+++.+.|.+.+.+.+.++.+.|..+.|   .++.|+|+|.+++...+++..
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~   85 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTS   85 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhc
Confidence            5789999999999999999997  78889999999999999988888777655433   567899999999999999999


Q ss_pred             hhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc--------ccchHHHHHHHHH
Q 018843           95 TNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--------GFTLTAYSWAFAY  166 (350)
Q Consensus        95 ~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--------~~~~~G~~~~l~s  166 (350)
                      ..+++|+++|.+++.|.++.+.++..+.+++++|+ +..+..+.++++........+|.        ..+ .|++|+...
T Consensus        86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~v-tsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~N  163 (309)
T COG5070          86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRV-TSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTN  163 (309)
T ss_pred             ccceeeeeeeHHHHhccceeehhHhhHHHHhcCcc-chhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehh
Confidence            99999999999999999999999999999999997 77789999999999999888876        233 599999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 018843          167 LVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLI  246 (350)
Q Consensus       167 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (350)
                      +++.+.+....|+..|-.+...++.++|+++++++++....+..+||....-      .+..+....+.+..+|++++.+
T Consensus       164 clssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~------annl~~d~l~am~ISgl~svgi  237 (309)
T COG5070         164 CLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNL------ANNLSVDSLMAMFISGLCSVGI  237 (309)
T ss_pred             hHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchh------hcCCChHHHHHHHHHHHHHhhh
Confidence            9999999999999888777788899999999999888888888888765421      1223556678899999999999


Q ss_pred             HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843          247 SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA  312 (350)
Q Consensus       247 ~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~  312 (350)
                      +|+.-||++-+|+++.++++.+++....+-|.++||++.+-..+..+.+-.++..+|.+.+.++++
T Consensus       238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999988776443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=2.4e-28  Score=224.52  Aligned_cols=282  Identities=25%  Similarity=0.365  Sum_probs=236.2

Q ss_pred             HHHHHHHHHHHHHHHHHHh-cC--CchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 018843           20 VGYALCSSLLAVINKFAIT-KF--NYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTN   96 (350)
Q Consensus        20 ~~~~~~s~~~~~~nK~~~~-~~--~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (350)
                      ..|..+.. ..++++.+.+ +.  ++|.++++.|++...+.........+  .++.++..++++++.++++.++..+++.
T Consensus         7 ~i~~~~~~-~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (303)
T PF08449_consen    7 GIFGGCCS-YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNA   83 (303)
T ss_pred             HHHHHHHH-HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence            33444333 3445555554 22  36999999999999888887665443  2233455688999999999999999999


Q ss_pred             hhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcc----c------chHHHHHHHHH
Q 018843           97 LLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSG----F------TLTAYSWAFAY  166 (350)
Q Consensus        97 al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~----~------~~~G~~~~l~s  166 (350)
                      +++|+|.|+.+++|++.|+++++++.+++|||+ +++++.++++.++|+++...+|..    .      +..|+++.+++
T Consensus        84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y-~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s  162 (303)
T PF08449_consen   84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRY-SRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS  162 (303)
T ss_pred             HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccc-cHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence            999999999999999999999999999999997 899999999999999997655421    1      12399999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 018843          167 LVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGL  244 (350)
Q Consensus       167 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (350)
                      .+++++..+++|++.++++.+++++++|+++.++++..+....  .+|..+..++..      .++..+..++..++.+.
T Consensus       163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~------~~p~~~~~l~~~s~~~~  236 (303)
T PF08449_consen  163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS------AHPSVLLYLLLFSLTGA  236 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH------HhHHHHHHHHHHHHHHH
Confidence            9999999999999999889999999999999988776666665  667776665543      25567788888888888


Q ss_pred             HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCC
Q 018843          245 LISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPG  311 (350)
Q Consensus       245 ~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~  311 (350)
                      ..+...+.++++.||++.+++..+|++.++++|+++||+++++.||+|+++++.|..+|++.++|++
T Consensus       237 ~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  237 LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            8888888999999999999999999999999999999999999999999999999999998888754

; GO: 0055085 transmembrane transport

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=5.6e-28  Score=225.03  Aligned_cols=289  Identities=10%  Similarity=0.042  Sum_probs=208.3

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCChhhhhHHHHHHHH
Q 018843            9 TKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFL--HHDPFTFDTAKKFLPAAFV   86 (350)
Q Consensus         9 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   86 (350)
                      +|..-.-..++..... +.++..+.|..++.--.|..+.++|+.++.+++.++.+.+++  +.++.+++++..+...+++
T Consensus         9 ~~~~~~~~~~~~~q~~-~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          9 RREAVFLTAMLATETS-VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhccchHHHHHHHHHH-HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence            3333333456666666 778888999999733238889999999998888876543322  2233345556666667766


Q ss_pred             HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHH------cccCCCchhhHHHHHHHHHhhhhhccc-Cc------
Q 018843           87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAF------RRQPCPSRLTFLSLVIILGGAVGYVAT-DS------  153 (350)
Q Consensus        87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~------~~e~~~~~~~~~~~~l~~~G~~l~~~~-~~------  153 (350)
                      ......+.+.+++|++++.++++.+++|++++++++++      +|||. +++++.+++++++|+.+.... +.      
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~-~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~  166 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS-SVAKVMGTILSLIGALVVIFYHGPRVFVAS  166 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccc-cHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence            64344578999999999999999999999999999999      69995 999999999999999985421 11      


Q ss_pred             -----------------ccc-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHH-HHHHHHHHHHHhcc-H
Q 018843          154 -----------------GFT-LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLL-SLIISPFFWFLTGE-Y  213 (350)
Q Consensus       154 -----------------~~~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~  213 (350)
                                       ..+ ..|+.+.++++++||+|.++.|+..++.+ +......++..+ +.++.++.....++ .
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence                             112 35999999999999999999999877532 222344455554 33333333332111 1


Q ss_pred             HHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHH
Q 018843          214 GEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLIC  292 (350)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G  292 (350)
                      ....       ..+ +.. ...+++.+++. ...|..+ +++++.+|...+++.+++|++++++|++++||++++.+++|
T Consensus       246 ~~~~-------~~~-~~~-~~~i~y~~i~t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG  315 (358)
T PLN00411        246 SVWI-------IHF-DIT-LITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG  315 (358)
T ss_pred             ccce-------ecc-chH-HHHHHHHHHHH-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence            1100       011 222 33466666654 4566555 99999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhcccccCC
Q 018843          293 LLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       293 ~~li~~g~~~~~~~~~~~  310 (350)
                      +++++.|+++..+.++++
T Consensus       316 ~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        316 GILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhhhhhh
Confidence            999999999988655444

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=7e-31  Score=224.23  Aligned_cols=298  Identities=20%  Similarity=0.252  Sum_probs=262.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCchHHHHHHHHHHHHHHHHHHHHhCc-----ccCC--CCChhhhhH
Q 018843           11 QYYTTSGLVVGYALCSSLLAVINKFAIT----KFNYPGLLTALQYLTSALGVWVLGKFGF-----LHHD--PFTFDTAKK   79 (350)
Q Consensus        11 ~~~~~~~~~~~~~~~s~~~~~~nK~~~~----~~~~p~~l~~~r~~~~~~~l~~~~~~~~-----~~~~--~~~~~~~~~   79 (350)
                      ++..+...+..|..+|+++++.||++++    ..+.|.+++.+|++.+..++..+.+.-.     .+.+  +++.+..++
T Consensus        25 n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~  104 (347)
T KOG1442|consen   25 NAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQ  104 (347)
T ss_pred             hhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHh
Confidence            3455666778889999999999999997    4567999999999999999888755211     1122  255677999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccc
Q 018843           80 FLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFT  156 (350)
Q Consensus        80 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~  156 (350)
                      ++|+++.+..++.+++.+++|++++.+.+=|+++.+|+.++.++++|+| .+.....++.+++.|..+...+|   ...+
T Consensus       105 vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lGvdqE~~~~~ls  183 (347)
T KOG1442|consen  105 VLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLGVDQEGSTGTLS  183 (347)
T ss_pred             hcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheeccccccccCccc
Confidence            9999999999999999999999999999999999999999999999999 58888888899999999988776   4567


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      +.|.++++.++++-|+..+++|+...+.+...|...+|+++.+++++.+...++||......+     ++.....+|..+
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~-----~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF-----PHLPAIKFWILM  258 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc-----ccchHHHHHHHH
Confidence            899999999999999999999999988888999999999999988888888889999888654     333467899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCCCC
Q 018843          237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAP  314 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~~~  314 (350)
                      .++|++++.++|...+-+|-+||.++.+.+.-|....+++++.+++|+.+..-|-|-++++.|...|.+.|.+++++.
T Consensus       259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~  336 (347)
T KOG1442|consen  259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999887765544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.96  E-value=6e-27  Score=203.50  Aligned_cols=292  Identities=16%  Similarity=0.202  Sum_probs=239.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc----CCCCChhh-hhHHHHHHHH
Q 018843           12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH----HDPFTFDT-AKKFLPAAFV   86 (350)
Q Consensus        12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~   86 (350)
                      +......+..|+++|+++.+.+|+.-.+|++|.+++..|+++-.+.....++..+.+    +..+++++ .|+..|.++.
T Consensus        14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala   93 (349)
T KOG1443|consen   14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA   93 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence            344556668888889999999999988999999999999999988888766643322    23566654 6667799999


Q ss_pred             HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHH
Q 018843           87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAY  166 (350)
Q Consensus        87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s  166 (350)
                      ...++.+.|++++|++.+.+++.|++.++|+.+++.++.-||. ++.-.+.+.++.+|+.+....+.+++..|..+...+
T Consensus        94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~-~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~a  172 (349)
T KOG1443|consen   94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKF-RWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAA  172 (349)
T ss_pred             hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhhheeEEEecccceeehhHHHHHHH
Confidence            9999999999999999999999999999999999999999995 888889999999999999999889999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CCcchhHHHHhHH-HHHHHHHHHHHhccHHHHH-HHHHHhcCCCCchhHHHHHHHHHH
Q 018843          167 LVTITTEMVYIKHMVTNLG---LNTWGFVLYNNLL-SLIISPFFWFLTGEYGEVF-AALVASAGSWFVPDVFFAVALSCV  241 (350)
Q Consensus       167 ~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  241 (350)
                      +++.+++..+++.++++.+   .+|.+++++..+. ++.++|....+-|...... +..+...+. ........+...|.
T Consensus       173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~-~~~rv~g~i~l~g~  251 (349)
T KOG1443|consen  173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTG-LILRVIGLISLGGL  251 (349)
T ss_pred             HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCcc-HHHHHHHHHHHHHH
Confidence            9999999999999998653   5788888877766 5667777766533222211 111111111 11223455666777


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          242 FGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       242 ~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      .+++..++.+..+.+++..+.++.+..|.+.+.+++.++.++.++..+|.|..+...|+..+..
T Consensus       252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            8888888889999999999999999999999999999999999999999999999999999843

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.95  E-value=1.8e-25  Score=204.68  Aligned_cols=269  Identities=14%  Similarity=0.084  Sum_probs=191.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHH
Q 018843           12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAI   91 (350)
Q Consensus        12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (350)
                      .......+..|.. +   ....|...++++ |..+.+.|+..+.+++.+...  .   ++.+++.++..+..++......
T Consensus         6 ~l~~l~a~~~Wg~-~---~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~   75 (295)
T PRK11689          6 TLIGLIAILLWST-M---VGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVSYE   75 (295)
T ss_pred             hHHHHHHHHHHHH-H---HHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHHHH
Confidence            3334445555554 2   345699888887 999999999999888776531  1   1222222334444344344445


Q ss_pred             HHhhhhhh----ccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-----------ccc
Q 018843           92 FTNTNLLR----HANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-----------GFT  156 (350)
Q Consensus        92 ~~~~~al~----~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-----------~~~  156 (350)
                      .+.+.+++    +.++..+.++.++.|+++.+++++++||| ++++++.+++++++|++++..++.           ..+
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  154 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASN  154 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccC
Confidence            55666664    46778889999999999999999999999 599999999999999998764432           123


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      ..|+.++++++++||+|.++.||..++  .++...  +....+..+.+.. ...++..          .. .+...|..+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~--~~~~~~~~l~~~~-~~~~~~~----------~~-~~~~~~~~l  218 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITL--FFILTALALWIKY-FLSPQPA----------MV-FSLPAIIKL  218 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhH--HHHHHHHHHHHHH-HHhcCcc----------cc-CCHHHHHHH
Confidence            469999999999999999999998653  344332  2222222222222 2222111          01 144556666


Q ss_pred             HHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843          237 ALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~  308 (350)
                      ++.++ ...+.|..+ +++|+.+|...+...+++|+++++++++++||++++.+++|+++++.|+++....++
T Consensus       219 ~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        219 LLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            67775 456666555 999999999999999999999999999999999999999999999999988765544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=5.8e-25  Score=201.10  Aligned_cols=261  Identities=13%  Similarity=0.061  Sum_probs=201.8

Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHH-HHHHHhhhhh-hccchhHH
Q 018843           29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFY-LAIFTNTNLL-RHANVDTF  106 (350)
Q Consensus        29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al-~~~s~s~~  106 (350)
                      .....|...++.+ |..++++|++++.+++.+..+.++++.  .+++++++....+.+.. ....+.+.+. ++++++.+
T Consensus        23 ~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   99 (292)
T PRK11272         23 TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHPL--PTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA   99 (292)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence            4567798887776 999999999999888877655443322  24556777667776653 4456677787 99999999


Q ss_pred             HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc-CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018843          107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT-DSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG  185 (350)
Q Consensus       107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~  185 (350)
                      +++.++.|+++++++.+ +||| ++++++.+++++++|+.+...+ +.+.+..|+.++++++++||++.+..||..++  
T Consensus       100 ~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--  175 (292)
T PRK11272        100 AVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP--  175 (292)
T ss_pred             HHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--
Confidence            99999999999999986 6999 5999999999999999987543 33445679999999999999999999987542  


Q ss_pred             CCcchhHHHHhHHHH-HHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHH
Q 018843          186 LNTWGFVLYNNLLSL-IISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFT  263 (350)
Q Consensus       186 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s  263 (350)
                       ++.....++...+. ++.+... ..++...          ...+...|..+.+.+++++...|..+ +++|+.++.+.+
T Consensus       176 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        176 -VGMMAGAAEMLAAGVVLLIASL-LSGERLT----------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHH-HcCCccc----------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence             22334455655543 3333322 2221110          11144567888888999888888776 899999999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843          264 VTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       264 ~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~  308 (350)
                      +..+++|+.+.+++++++||++|+.+++|+++++.|+++.++.++
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999998876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=8e-25  Score=200.87  Aligned_cols=274  Identities=8%  Similarity=0.085  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHH-HHHH
Q 018843           15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYL-AIFT   93 (350)
Q Consensus        15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   93 (350)
                      ..+.++.|...    ....|..+++.+ |..+.++|+.++.+.+.+..+  ++   +   +.++.++..+++... ...+
T Consensus         9 ~l~~~~~Wg~~----~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~---~---~~~~~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          9 ALLVVVVWGLN----FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RP---K---VPLNLLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHhhh----HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CC---C---CchHHHHHHHHHHHHHHHHH
Confidence            33444455443    344598888777 999999999887665544332  11   1   123345555554333 3345


Q ss_pred             hhhhhhc-cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccchHHHHHHHHHHHH
Q 018843           94 NTNLLRH-ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFTLTAYSWAFAYLVT  169 (350)
Q Consensus        94 ~~~al~~-~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~  169 (350)
                      .+.+++| .+++.+.++.++.|+++.+++++++||| ++++++.+++++++|+.+...++   .+.+..|+.++++++++
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~  154 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS  154 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence            6778887 6889999999999999999999999999 59999999999999999876432   22345799999999999


Q ss_pred             HHHHHHHHHHHhhcCC-CCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 018843          170 ITTEMVYIKHMVTNLG-LNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLIS  247 (350)
Q Consensus       170 ~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (350)
                      ++.|.++.|+..++.+ ........++...+.+ +....... ++.......    ... .+...|..+++.+++++++.
T Consensus       155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~-~~~~~~~~l~~l~i~~t~~~  228 (299)
T PRK11453        155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHS----LVT-IDMTTILSLMYLAFVATIVG  228 (299)
T ss_pred             HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhh----hcc-CCHHHHHHHHHHHHHHHHHH
Confidence            9999999999765322 1222233334433221 22221122 111111000    011 24567899999999999999


Q ss_pred             HHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843          248 FFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       248 ~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~  308 (350)
                      |..+ +++++.++.+.+...+++|++++++|++++||++++.+++|++++++|+++..+.++
T Consensus       229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9887 899999999999999999999999999999999999999999999999998766554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=8.9e-25  Score=199.93  Aligned_cols=255  Identities=13%  Similarity=0.031  Sum_probs=194.0

Q ss_pred             HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHH
Q 018843           28 LLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFI  107 (350)
Q Consensus        28 ~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~  107 (350)
                      ......|+.+++++ |..+.++|+.++.+++.+..+.++   ++.++++++..+..+++......+.+.+++|+|++.++
T Consensus        26 ~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~  101 (293)
T PRK10532         26 SGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAV  101 (293)
T ss_pred             hhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence            44557899998877 888999999999888877653221   13456677777788887777777888999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc---CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018843          108 VFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT---DSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNL  184 (350)
Q Consensus       108 il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~---~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~  184 (350)
                      ++.++.|+++.+++    +|| +.+  +..+.++++|+.++...   +.+.+..|++++++++++|+.|.+..|+..++ 
T Consensus       102 ~l~~t~Pi~~~ll~----~~~-~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~-  173 (293)
T PRK10532        102 ALEFTGPLAVALFS----SRR-PVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE-  173 (293)
T ss_pred             HHHHHHHHHHHHHh----cCC-hHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            99999999999886    355 444  34566778998876422   22345679999999999999999999998764 


Q ss_pred             CCCcchhHHHHhHH-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHH
Q 018843          185 GLNTWGFVLYNNLL-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAF  262 (350)
Q Consensus       185 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~  262 (350)
                       .++... .+.... ++++.+.... .++ .          .. .+...|...++.++++++++|..+ +++++.+|...
T Consensus       174 -~~~~~~-~~~~~~~~~~l~~~~~~-~~~-~----------~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a  238 (293)
T PRK10532        174 -HGPATV-AIGSLIAALIFVPIGAL-QAG-E----------AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF  238 (293)
T ss_pred             -CCchHH-HHHHHHHHHHHHHHHHH-ccC-c----------cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence             344444 344444 3334443322 111 0          01 133455666789999999999776 99999999999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          263 TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       263 s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      +++.+++|++++++|++++||++++.+++|.+++++|.+.+.+..++
T Consensus       239 s~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        239 GTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999998765433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=2.1e-24  Score=194.16  Aligned_cols=252  Identities=15%  Similarity=0.126  Sum_probs=196.2

Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHH-HHHHHHHhhhhhhccchhHHHHH
Q 018843           31 VINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFV-FYLAIFTNTNLLRHANVDTFIVF  109 (350)
Q Consensus        31 ~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~~il  109 (350)
                      +..|+.+++...|..+.++|++.+.+++.+..+.+      .++++++..+..+.+ ......+.+.+++|++++..+++
T Consensus         6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii   79 (260)
T TIGR00950         6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL   79 (260)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence            45698887655588899999999988877765443      134445555566555 45556788999999999999999


Q ss_pred             HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 018843          110 RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNT  188 (350)
Q Consensus       110 ~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~  188 (350)
                      .++.|+++++++.+++|||. +++++.++.++++|+.+...++ .+.+..|+.++++++++++.+.++.|+..++.+.++
T Consensus        80 ~~~~P~~~~~~~~l~~~e~~-~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~  158 (260)
T TIGR00950        80 LYLAPLYVTLLSDLMGKERP-RKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL  158 (260)
T ss_pred             HhhhHHHHHHHHHHHccCCC-cHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence            99999999999999999995 9999999999999999875433 345568999999999999999999999887544444


Q ss_pred             chhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHH
Q 018843          189 WGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGV  267 (350)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~  267 (350)
                      .....+....+.+++.+.....++..           .. +...|..+++.++++....|..+ +++++.++.+.+...+
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~  226 (260)
T TIGR00950       159 LQFTGWVLLLGALLLLPFAWFLGPNP-----------QA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCC-----------Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence            33333445554433333322222211           11 33456778888888888777766 8999999999999999


Q ss_pred             HHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhh
Q 018843          268 VNKFLTVVINVLIWDKHASPFGLICLLVTIAGGV  301 (350)
Q Consensus       268 l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~  301 (350)
                      ++|+++.+++++++||++++.+++|..+++.|++
T Consensus       227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999863

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=2.4e-24  Score=196.69  Aligned_cols=271  Identities=15%  Similarity=0.142  Sum_probs=197.8

Q ss_pred             HHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhH
Q 018843           29 LAVINKFAIT-KFNYPGLLTALQYLTSALGVWVLGKFGFL--HHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDT  105 (350)
Q Consensus        29 ~~~~nK~~~~-~~~~p~~l~~~r~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~  105 (350)
                      ....+..+-+ +.+.|.+-+++-.+.-.++.......|+.  +..+.-++++.+.+.++++.....++.+.|++|++++.
T Consensus        28 t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS  107 (334)
T PF06027_consen   28 TGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS  107 (334)
T ss_pred             HHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence            3344454444 56778875555554444444333333221  11222345677778889999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHH
Q 018843          106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------GFTLTAYSWAFAYLVTITTEMVY  176 (350)
Q Consensus       106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~  176 (350)
                      ++++.++..+++++++++++|+|+ ++.++.|++++++|++++...|.         +....|++++++++++||+++++
T Consensus       108 ~~lL~~~~i~~~~~LS~~fL~~ry-~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~  186 (334)
T PF06027_consen  108 VQLLDCTSIPFVMILSFIFLKRRY-SWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL  186 (334)
T ss_pred             HHhhhhhhhHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999997 99999999999999998765442         23358999999999999999999


Q ss_pred             HHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhh
Q 018843          177 IKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARK  255 (350)
Q Consensus       177 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~  255 (350)
                      .|+..|+.  +..+......+.+.++..+.... -|..+..+.      +| +...+..++.. .++....|... ..++
T Consensus       187 ~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~i-le~~~i~~~------~w-~~~~~~~~v~~-~~~lf~~y~l~p~~l~  255 (334)
T PF06027_consen  187 EEKLVKKA--PRVEFLGMLGLFGFIISGIQLAI-LERSGIESI------HW-TSQVIGLLVGY-ALCLFLFYSLVPIVLR  255 (334)
T ss_pred             HHHhcccC--CHHHHHHHHHHHHHHHHHHHHHh-eehhhhhcc------CC-ChhhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            99999854  45555555555544433333222 255544332      34 23333333333 33444455555 7899


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCC
Q 018843          256 AISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPG  311 (350)
Q Consensus       256 ~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~  311 (350)
                      ..||+...+.....++.+++++++++|++++|..++|.++++.|.++|+..+.+.+
T Consensus       256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            99999999999999999999999999999999999999999999999997766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=2e-24  Score=197.96  Aligned_cols=259  Identities=8%  Similarity=-0.001  Sum_probs=176.3

Q ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc-C--CCC-ChhhhhHHHHHHHHHHHHHHHhhhhhhccchhH
Q 018843           30 AVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH-H--DPF-TFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDT  105 (350)
Q Consensus        30 ~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~  105 (350)
                      ....|.. .+.+ |..+.++|++++.+++.+....++++ .  ++. +++++......++.......+++++++++|++.
T Consensus        24 ~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  101 (296)
T PRK15430         24 PAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLE  101 (296)
T ss_pred             HHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence            3445875 4566 88999999999987666554332211 0  011 122222222333445556788999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018843          106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG  185 (350)
Q Consensus       106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~  185 (350)
                      ++++.++.|+++++++++++|||. +++++.+++++++|++++..++.+.    ..++++++++||+|.++.|+..++..
T Consensus       102 a~~l~~~~Pi~v~l~~~~~l~E~~-~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~  176 (296)
T PRK15430        102 ASLGYFINPLVNIVLGMIFLGERF-RRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEAQ  176 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            999999999999999999999995 9999999999999999876433222    14688899999999999988654221


Q ss_pred             CCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 018843          186 LNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPD-VFFAVALSCVFGLLISFFGFAARKAISATAFTV  264 (350)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~  264 (350)
                      .+......+....+.+.   ......+....        .. .++. .+..+...++.+....++.++++++.+|.+.++
T Consensus       177 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~  244 (296)
T PRK15430        177 TGMLIETMWLLPVAAIY---LFAIADSSTSH--------MG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGF  244 (296)
T ss_pred             hhHHHHHHHHHHHHHHH---HHHHccCCccc--------cc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            12222222223232211   11111110000        00 1222 234444455554444444459999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843          265 TGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV  307 (350)
Q Consensus       265 ~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~  307 (350)
                      +.+++|++++++|++++||++++.+++|+++++.|+.+.....
T Consensus       245 ~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        245 FQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999988888766543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.91  E-value=3.2e-23  Score=173.82  Aligned_cols=258  Identities=16%  Similarity=0.174  Sum_probs=221.9

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHH
Q 018843           39 KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA  118 (350)
Q Consensus        39 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~  118 (350)
                      .|.+...+.++|+.+..+..-++...+  +..+.++..-+....+++-+.+.+.-.|.++||+|.|+..+-|++.|+.++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM  126 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM  126 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence            366777899999999988876655443  323445555667778888899999999999999999999999999999999


Q ss_pred             HHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchh
Q 018843          119 LADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGF  191 (350)
Q Consensus       119 ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~  191 (350)
                      ++++++.||++ +++++..+++++.|+++.-+.+.       .....|-++.+.|.-..++....++|+...+..+.-.+
T Consensus       127 ilGVl~~~KsY-~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~M  205 (337)
T KOG1580|consen  127 ILGVLFAHKSY-HWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSM  205 (337)
T ss_pred             eeehhhhcccc-cHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhh
Confidence            99999999998 79999999999999999765422       12237999999999999999999999877666667779


Q ss_pred             HHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 018843          192 VLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKF  271 (350)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v  271 (350)
                      |.|+++.+.+.+....+++||..+...+..      .+|..|+.+...++.+...+++.|.-+...+|.+-|++...+..
T Consensus       206 M~~~NlwStL~Lg~g~lfTGElweF~yF~~------RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKf  279 (337)
T KOG1580|consen  206 MFYTNLWSTLYLGAGLLFTGELWEFFYFVQ------RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKF  279 (337)
T ss_pred             HHHHHHHHHHHhhhhheehhhHHHHHHHHH------hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHH
Confidence            999999999999888889999877765532      37788999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          272 LTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       272 ~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      ++++.|+++|+++++..||+|.++++.|...-..
T Consensus       280 FTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  280 FTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            9999999999999999999999999999876543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.90  E-value=9.1e-22  Score=171.54  Aligned_cols=262  Identities=16%  Similarity=0.162  Sum_probs=225.8

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHH
Q 018843           39 KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA  118 (350)
Q Consensus        39 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~  118 (350)
                      +|..|.++.+.|-+.+.+.-..+...++.+  .-.++.+.+....++......++++.|++|+|.|+.++.|++.-+.|+
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            467799999999999988887766554333  223557888888999999999999999999999999999999999999


Q ss_pred             HHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 018843          119 LADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW  189 (350)
Q Consensus       119 ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~  189 (350)
                      +.+.++.|+|+ +..+++..++..+|+.+....+.         ..++.|+.++..+.+++++.+..++++.++.+.+++
T Consensus       125 lmg~Lvy~~ky-~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~  203 (327)
T KOG1581|consen  125 LMGTLVYGRKY-SSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSL  203 (327)
T ss_pred             HHHHHHhcCcc-CcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHh
Confidence            99999999998 78889999999999998654321         245789999999999999999999999999999999


Q ss_pred             hhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 018843          190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVN  269 (350)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~  269 (350)
                      ++|++.++.+++......+..+.+.+..++..      .++.++..++..+.++.+.+.+.++-+++.++.+.+.++..|
T Consensus       204 ~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~------~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttR  277 (327)
T KOG1581|consen  204 HMMFGVNLFSAILNGTYLILQGHLLPAVSFIK------EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTR  277 (327)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH------cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHH
Confidence            99999999987766666655555555544432      277889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          270 KFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       270 ~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      ..++++++.+.+|+++++.||.|..+++.|..+-.+.+.+
T Consensus       278 k~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  278 KMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999886666555

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=1.7e-20  Score=170.76  Aligned_cols=260  Identities=15%  Similarity=0.108  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC--cccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccch
Q 018843           26 SSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFG--FLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANV  103 (350)
Q Consensus        26 s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~  103 (350)
                      .......+|...++ ..+  ...++.....+++.+....+  ..+.++.+++.+......+........+.+.++++.|+
T Consensus        13 ~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   89 (281)
T TIGR03340        13 HAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADV   89 (281)
T ss_pred             HHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence            44555667755544 223  24555556665665544432  11122222333333344444556667788999999999


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-cccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018843          104 DTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-SGFTLTAYSWAFAYLVTITTEMVYIKHMVT  182 (350)
Q Consensus       104 s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~  182 (350)
                      +..+.+.++.|+++.+++++++||| ++++++.++.++++|+.+...++ ...+..|+.++++++++++.|.++.|+..+
T Consensus        90 ~~~~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~  168 (281)
T TIGR03340        90 GLVYPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAAL  168 (281)
T ss_pred             hhhhhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccccc
Confidence            9999999999999999999999999 59999999999999999875433 234457888999999999999999887643


Q ss_pred             cCCCCcc-hhHHHHhHHHHHH-HHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhcc
Q 018843          183 NLGLNTW-GFVLYNNLLSLII-SPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAI  257 (350)
Q Consensus       183 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~  257 (350)
                      +.  ++. ....+........ .|.....  .++.. ..          .....+....+.+.+.....|..+ +++++.
T Consensus       169 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~  235 (281)
T TIGR03340       169 GV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-MF----------PYARQILPSATLGGLMIGGAYALVLWAMTRL  235 (281)
T ss_pred             ch--hcccccHHHHHHHHHHHHHHHHHHHHHHhccc-hh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            22  221 1222222111111 1222111  11110 00          011233455556666666666555 999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhh
Q 018843          258 SATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVL  302 (350)
Q Consensus       258 sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~  302 (350)
                      ++...+...+++|++++++|++++||++++.+++|++++++|+.+
T Consensus       236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       236 PVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             CceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.85  E-value=5.5e-18  Score=154.38  Aligned_cols=259  Identities=17%  Similarity=0.206  Sum_probs=182.9

Q ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHH-HHHHHHHHHHHhhhhhhccchhHHHH
Q 018843           30 AVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLP-AAFVFYLAIFTNTNLLRHANVDTFIV  108 (350)
Q Consensus        30 ~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~~s~s~~~i  108 (350)
                      ....|...++...+....+.|.....+........+..+.++ .++.++..+. ..+.......+++.++++++++.++.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (292)
T COG0697          23 FIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASL  101 (292)
T ss_pred             HHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence            334454454422244466668888877744333322111111 1111233343 44445555778899999999999999


Q ss_pred             HHhHHHHHHHHHHH-HHcccCCCchhhHHHHHHHHHhhhhhcccCcccc---hHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018843          109 FRSLTPLLVALADT-AFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFT---LTAYSWAFAYLVTITTEMVYIKHMVTNL  184 (350)
Q Consensus       109 l~~~~pi~v~ll~~-l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~---~~G~~~~l~s~~~~a~~~v~~k~~~~~~  184 (350)
                      +.++.|+++.+++. +++|||. +++++.++++.+.|+.++..++...+   ..|+.+++.++++++++.++.|+.. + 
T Consensus       102 l~~~~p~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~-  178 (292)
T COG0697         102 IIGLLPLFTALLAVLLLLGERL-SLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R-  178 (292)
T ss_pred             HHHHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-
Confidence            99999999999997 7779995 99999999999999999887655433   5899999999999999999999886 2 


Q ss_pred             CCCcchhHH-HHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHH
Q 018843          185 GLNTWGFVL-YNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAF  262 (350)
Q Consensus       185 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~  262 (350)
                       .++..... +... ...+....... .+..  .         ......|....+.++++....+..+ +++++.++...
T Consensus       179 -~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~--~---------~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~  244 (292)
T COG0697         179 -LGPVTLALLLQLL-LALLLLLLFFL-SGFG--A---------PILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV  244 (292)
T ss_pred             -CChHHHHHHHHHH-HHHHHHHHHHh-cccc--c---------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence             23333333 2222 11111111111 1111  0         0133567788888888887555554 89999999999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          263 TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       263 s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      +...+++|+.+.+++++++||+++..+++|+.+++.|+.+...+
T Consensus       245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999998766

>TIGR00688 rarD rarD protein

Probab=99.84  E-value=3.7e-18  Score=153.29  Aligned_cols=231  Identities=10%  Similarity=0.135  Sum_probs=155.2

Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH-hCccc-----CCCCChhh-hhHHHHHHHHHHHHHHHhhhhhhcc
Q 018843           29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGK-FGFLH-----HDPFTFDT-AKKFLPAAFVFYLAIFTNTNLLRHA  101 (350)
Q Consensus        29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~  101 (350)
                      .....|. ..+.+ |..+.++|++++.+++.+... .++++     .++.++++ +......+++......+++.+++++
T Consensus        17 ~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~   94 (256)
T TIGR00688        17 MYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG   94 (256)
T ss_pred             HHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            3455697 44565 899999999998877665432 22211     11111221 2234455666667788899999999


Q ss_pred             chhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 018843          102 NVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV  181 (350)
Q Consensus       102 s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~  181 (350)
                      ++++++++.++.|+++++++++++|||+ +++++.+++++++|++++..++.+..    .++++++++++.|.+..|+..
T Consensus        95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek~-~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~  169 (256)
T TIGR00688        95 SSLEVSLGYLINPLVMVALGRVFLKERI-SRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALK  169 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999995 99999999999999998754332222    357889999999999998865


Q ss_pred             hcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchh
Q 018843          182 TNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISAT  260 (350)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~  260 (350)
                      ++ +  ..+... ..+...+......... ++...        +.+.....|..++..++++ .+.|..+ .++|+.+|.
T Consensus       170 ~~-~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~l~~~g~~t-~i~~~l~~~a~~~~~a~  235 (256)
T TIGR00688       170 NT-D--LAGFCL-ETLSLMPVAIYYLLQT-DFATV--------QQTNPFPIWLLLVLAGLIT-GTPLLAFVIAANRLPLN  235 (256)
T ss_pred             CC-C--cchHHH-HHHHHHHHHHHHHHHh-ccCcc--------cccCchhHHHHHHHHHHHH-HHHHHHHHHHHHcCChH
Confidence            42 2  222211 1111111111111111 11100        0011112567777777774 4555554 999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHc
Q 018843          261 AFTVTGVVNKFLTVVINVLI  280 (350)
Q Consensus       261 ~~s~~~~l~~v~~~~ls~~~  280 (350)
                      +.+++.+++|+++++++++.
T Consensus       236 ~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       236 LLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.84  E-value=6.8e-18  Score=143.61  Aligned_cols=252  Identities=13%  Similarity=0.041  Sum_probs=196.9

Q ss_pred             HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhH
Q 018843           33 NKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSL  112 (350)
Q Consensus        33 nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~  112 (350)
                      .|.++...+ |.-.+..|..++.+++..+++-.+   +++++++++.++..|....+++.++|.+++.+|.+++..+.++
T Consensus        31 Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~  106 (292)
T COG5006          31 AKSLFPLVG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT  106 (292)
T ss_pred             HHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence            366665555 777999999999888888765221   3567788889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 018843          113 TPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW  189 (350)
Q Consensus       113 ~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~  189 (350)
                      .|+.+.+++     .|  +.++..-+.+.+.|..+.....   ...|+.|..+.+++..||+.|++..||.-+.  .+.-
T Consensus       107 GPL~vA~~~-----sR--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~  177 (292)
T COG5006         107 GPLAVALLS-----SR--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGT  177 (292)
T ss_pred             cHHHHHHHh-----cc--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCc
Confidence            999988763     22  2445666777888888765332   3567899999999999999999999998762  2333


Q ss_pred             hhHHHHhHH-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHH
Q 018843          190 GFVLYNNLL-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGV  267 (350)
Q Consensus       190 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~  267 (350)
                      +.+.+-+.+ +.+.+|+..-..+  +           ...++.....-+..++++.++.|..= .++++.++.+.++...
T Consensus       178 ~g~a~gm~vAaviv~Pig~~~ag--~-----------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS  244 (292)
T COG5006         178 AGVAVGMLVAALIVLPIGAAQAG--P-----------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS  244 (292)
T ss_pred             hHHHHHHHHHHHHHhhhhhhhcc--h-----------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence            334445555 3444455432211  1           12266677788888999999999875 8999999999999999


Q ss_pred             HHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          268 VNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       268 l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      ++|.++.+.|++++||++|+.||+|++.++.++.-..+..+|+
T Consensus       245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            9999999999999999999999999999999998776655544

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=2.8e-18  Score=147.07  Aligned_cols=294  Identities=15%  Similarity=0.097  Sum_probs=228.3

Q ss_pred             cCCcchHHH-HHHHHHHHHHHHHHHHHHHHHHh--cC-CchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHH
Q 018843            7 DSTKQYYTT-SGLVVGYALCSSLLAVINKFAIT--KF-NYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLP   82 (350)
Q Consensus         7 ~~~~~~~~~-~~~~~~~~~~s~~~~~~nK~~~~--~~-~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   82 (350)
                      .++|+.|.= .+.....++.......+..++++  +| |+.+.+++.|++.-..+-.+-...  . +++-....||....
T Consensus        35 ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~-~~k~r~iP~rtY~~  111 (367)
T KOG1582|consen   35 LSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--I-QTKRRVIPWRTYVI  111 (367)
T ss_pred             cccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--e-cccceecchhHhhh
Confidence            345554332 23333444446666777787776  55 478899999987764443332211  1 11111235788999


Q ss_pred             HHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc----ccchH
Q 018843           83 AAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS----GFTLT  158 (350)
Q Consensus        83 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~----~~~~~  158 (350)
                      ++.+..+.+.+.+.++.|++.|+-.+.|++..+.+++.+.++-++|+ ...++.+..++.+|.++....|.    +++..
T Consensus       112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY-~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~  190 (367)
T KOG1582|consen  112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRY-GVHDYIAAMLMSLGLIWFTLADSQTSPNFNLI  190 (367)
T ss_pred             hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccc-cHHHHHHHHHHHHHHHhhhhcccccCCCccee
Confidence            99999999999999999999999999999999999999999999998 79999999999999999876654    67789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL  238 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (350)
                      |+.++-++.++.|+-..++++.++..+-+..++.+|...++.+.+......+||..+.+.+-.    ++ +.......++
T Consensus       191 Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fca----eh-p~~tyGy~~~  265 (367)
T KOG1582|consen  191 GVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCA----EH-PVRTYGYAFL  265 (367)
T ss_pred             eHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHH----hC-cHhHHHHHHH
Confidence            999999999999999999999998777788899999988888777777778888877765422    11 2224444444


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          239 SCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      .+..+....-.....++-.+|.+.+.++..++.+++++|+++|..++|....-|..+++.|+++-.+.++.
T Consensus       266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            44555555555556789999999999999999999999999999999999999999999999987777643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.2e-16  Score=141.78  Aligned_cols=278  Identities=17%  Similarity=0.159  Sum_probs=205.0

Q ss_pred             HHHHHHHHHHHHHHHh--cCCc-hHHHHHHHHHHHHHHHHHHHHhCc-----ccCCCC------ChhhhhHHHHHHHHHH
Q 018843           23 ALCSSLLAVINKFAIT--KFNY-PGLLTALQYLTSALGVWVLGKFGF-----LHHDPF------TFDTAKKFLPAAFVFY   88 (350)
Q Consensus        23 ~~~s~~~~~~nK~~~~--~~~~-p~~l~~~r~~~~~~~l~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~   88 (350)
                      -+.+..+..+.|+.-.  +.+| |.+..+.-=++-.+++....+.+.     +..+.+      ++++..++...++++.
T Consensus        24 t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYa  103 (345)
T KOG2234|consen   24 TAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYA  103 (345)
T ss_pred             HHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHH
Confidence            3335566677777654  2233 566555544555555555444332     111222      2345667778888998


Q ss_pred             HHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-----------cccch
Q 018843           89 LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-----------SGFTL  157 (350)
Q Consensus        89 ~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-----------~~~~~  157 (350)
                      ....+.+.++.+.+++++++..++..+.++++..++++||. ++.+|.++++.++|+.+++.+.           ....+
T Consensus       104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL-s~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~  182 (345)
T KOG2234|consen  104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL-SRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF  182 (345)
T ss_pred             HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence            88878999999999999999999999999999999999996 9999999999999999987221           12235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843          158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA  237 (350)
Q Consensus       158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (350)
                      .|....+.++++.++..++.++++|+.+.+.|-+..-...+++++..+.... .|..... + ...+.+| +...|..++
T Consensus       183 ~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~-~d~~~i~-~-~gff~G~-s~~vw~vVl  258 (345)
T KOG2234|consen  183 LGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILL-QDGEAIN-E-YGFFYGY-SSIVWLVVL  258 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh-ccccccc-c-CCccccc-cHHHHHHHH
Confidence            8999999999999999999999999777777765444445555444444332 2443332 0 1112344 556778887


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      ..++-|...+..    +|+.+-..-.....+..+++.+.|+.+||.++|....+|..+++.++.+|.....+
T Consensus       259 ~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  259 LNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            777777776654    79999999999999999999999999999999999999999999999999944333

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.6e-18  Score=148.98  Aligned_cols=282  Identities=17%  Similarity=0.257  Sum_probs=203.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhCcccCCCCChh-hhhHHHHHHHHHHHHHHHh
Q 018843           17 GLVVGYALCSSLLAVINKFAITKFN-YPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFD-TAKKFLPAAFVFYLAIFTN   94 (350)
Q Consensus        17 ~~~~~~~~~s~~~~~~nK~~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   94 (350)
                      .....+..|.....++. .+.++.| .-..+++.|+++...-=++.-    .|....+++ ..|++...-.+++....++
T Consensus         7 ai~~vf~GCcsnvv~lE-~L~~~~pgsgNLITFaqFlFia~eGlif~----skf~~~k~kiplk~Y~i~V~mFF~vnv~N   81 (330)
T KOG1583|consen    7 AISLVFGGCCSNVVFLE-LLVRNEPGSGNLITFAQFLFIATEGLIFT----SKFFTVKPKIPLKDYAITVAMFFIVNVTN   81 (330)
T ss_pred             HHHHHHHhhhchHHHHH-HHHHhCCCCeeehHHHHHHHHHHhceeee----ccccccCCCCchhhhheehheeeeeeeec
Confidence            34444555454444443 3444443 345789999876544333321    122222233 4667776666666667889


Q ss_pred             hhhhhc-cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc---cCcc--------------c-
Q 018843           95 TNLLRH-ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA---TDSG--------------F-  155 (350)
Q Consensus        95 ~~al~~-~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~---~~~~--------------~-  155 (350)
                      |.++++ +|.|...++|+..++.+++++++++|+|+ +.+++.+++...+|+++...   .|..              + 
T Consensus        82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Y-s~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~  160 (330)
T KOG1583|consen   82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRY-SLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF  160 (330)
T ss_pred             cceeeecccceEEEEEecCcHHHHHHHHHHhcccee-ehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence            999997 89999999999999999999999999998 89999999999999998432   1111              1 


Q ss_pred             c-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhc----CC--CC
Q 018843          156 T-LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASA----GS--WF  228 (350)
Q Consensus       156 ~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~  228 (350)
                      . ..|+.+...+.+..|...++++...|+++-++-+.++|++++++   |.+.+..+|..+-+..+....    +.  ..
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL---P~Flf~~~div~~~~~~~~se~~~~p~~g~~  237 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL---PLFLFMGDDIVSHWRLAFKSESYLIPLLGFK  237 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc---chHHHhcchHHHHHHHHhcCcceeccccCcc
Confidence            1 25899999999999999999999999999899999999999998   666666666555443322110    11  11


Q ss_pred             chhHHHHHHHHHHHHHHHHHHH----HHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          229 VPDVFFAVALSCVFGLLISFFG----FAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      -|..|..++..    ...+|..    +..-.++++.+++++-.+|+.++.++|++.|+.++|+++|+|..+++.|.++|.
T Consensus       238 vP~~~~yLl~n----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  238 VPSMWVYLLFN----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             ccHHHHHHHHH----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            22334444443    3333333    234468899999999999999999999999999999999999999999999998


Q ss_pred             ccccCCC
Q 018843          305 QSVTGPG  311 (350)
Q Consensus       305 ~~~~~~~  311 (350)
                      ....+.+
T Consensus       314 ~~~~~~~  320 (330)
T KOG1583|consen  314 NVWNHPK  320 (330)
T ss_pred             HHHcCcc
Confidence            7666544

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.77  E-value=4.4e-17  Score=140.44  Aligned_cols=278  Identities=19%  Similarity=0.240  Sum_probs=201.9

Q ss_pred             HHHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHHHHHhCccc-CC-------CC---Chh--hhhHHHH
Q 018843           23 ALCSSLLAVINKFAIT-------KFNYPGLLTALQYLTSALGVWVLGKFGFLH-HD-------PF---TFD--TAKKFLP   82 (350)
Q Consensus        23 ~~~s~~~~~~nK~~~~-------~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~-------~~---~~~--~~~~~~~   82 (350)
                      .++.+..+++.||.=+       +|++|.+-+..-++--..+++.+...|.+. .+       +.   .++  ..+..++
T Consensus        12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~   91 (372)
T KOG3912|consen   12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP   91 (372)
T ss_pred             hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence            3446667778898753       477788765555554445555543332221 00       00   111  2345678


Q ss_pred             HHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------
Q 018843           83 AAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------  153 (350)
Q Consensus        83 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------  153 (350)
                      .++|-..+..+.+.++.+++++.+|+++....+|+.+++..++++++ +.++|+++....+|++.+...|.         
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti-~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d  170 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTI-TGRQWLGILFVSLGLVIVGSLDVHLVTDPYTD  170 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhccc-chhhHHHHHHHHhhhheeeeeecccccCCccc
Confidence            89998888888999999999999999999999999999999999997 89999999999999998765432         


Q ss_pred             -ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHH-----Hhc------------cHHH
Q 018843          154 -GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWF-----LTG------------EYGE  215 (350)
Q Consensus       154 -~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------------~~~~  215 (350)
                       +.-..|+++.+++.+.-|..+++.+|..++.+.+|.+...|..+.+.+++.....     ..+            |+..
T Consensus       171 ~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~  250 (372)
T KOG3912|consen  171 YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGD  250 (372)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHH
Confidence             2235799999999999999999999999999999999988888877543333322     112            1222


Q ss_pred             HHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHH
Q 018843          216 VFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLV  295 (350)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l  295 (350)
                      .+...    .  ..+..........+.-.+.|+.-....|..|+++-.+...++..+..+++...+.|.++..|+.|.++
T Consensus       251 ~~~~~----~--e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli  324 (372)
T KOG3912|consen  251 AFAAL----Q--ESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI  324 (372)
T ss_pred             HHHHh----c--CCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence            22111    0  12222222222222223345555677899999999999999999999999999999999999999999


Q ss_pred             Hhhhhhhhcccc
Q 018843          296 TIAGGVLYQQSV  307 (350)
Q Consensus       296 i~~g~~~~~~~~  307 (350)
                      .+.|.++|+..-
T Consensus       325 Li~Gi~lY~~il  336 (372)
T KOG3912|consen  325 LIMGIILYNQIL  336 (372)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998653

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.77  E-value=6.4e-20  Score=156.84  Aligned_cols=284  Identities=14%  Similarity=0.133  Sum_probs=211.2

Q ss_pred             cccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHH-HH
Q 018843            5 RFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFL-PA   83 (350)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~   83 (350)
                      |-.++|....+.+....|++ +..+.+..|-..  . .|-...-.|++.-.++..++...++.  +-+-++..|+|+ +.
T Consensus        30 ri~~d~p~~gl~l~~vs~ff-~~~~vv~t~~~e--~-~p~e~a~~r~l~~mlit~pcliy~~~--~v~gp~g~R~~LiLR  103 (346)
T KOG4510|consen   30 RISKDKPNLGLLLLTVSYFF-NSCMVVSTKVLE--N-DPMELASFRLLVRMLITYPCLIYYMQ--PVIGPEGKRKWLILR  103 (346)
T ss_pred             HhhcCCCccCceehhhHHHH-hhHHHhhhhhhc--c-ChhHhhhhhhhhehhhhheEEEEEee--eeecCCCcEEEEEee
Confidence            34456778878778888666 778877777433  2 26777777766555555554332211  111233334444 56


Q ss_pred             HHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-----------
Q 018843           84 AFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-----------  152 (350)
Q Consensus        84 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-----------  152 (350)
                      |++...+....+++++|+|.+.+.++..++|+++.++++.++|||+ ++.+.++....+.|++++..+.           
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~-t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~  182 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF-TKFEALGSLITLLGVVLIVRPPFLFGDTTEGED  182 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC-cHHHHHHHHHhhheEEEEecCCcccCCCccccc
Confidence            7778888888999999999999999999999999999999999997 8999999999999999964321           


Q ss_pred             ---cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCc
Q 018843          153 ---SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFV  229 (350)
Q Consensus       153 ---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (350)
                         .+.+..|.+.++.+++.-|-..++.|++-|  +.+..-.+.|.+++.++...+.....+++.-         +  +.
T Consensus       183 ~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l---------P--~c  249 (346)
T KOG4510|consen  183 SSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQL---------P--HC  249 (346)
T ss_pred             cccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccceec---------C--cc
Confidence               123457888889999988888888888877  3444444555556555433333333333321         1  14


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843          230 PDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~  308 (350)
                      ..-|+.++..|++++..+.....++|.-.|...++..+..-+++.++-+++|||.||++.|.|+++++.+..+....|.
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            4567888899999999999999999999999999999999999999999999999999999999999988887665444

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.76  E-value=1e-15  Score=139.62  Aligned_cols=245  Identities=11%  Similarity=0.057  Sum_probs=171.7

Q ss_pred             HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC-hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHh
Q 018843           33 NKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT-FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRS  111 (350)
Q Consensus        33 nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~  111 (350)
                      .|.+. +.+.+...   |+.++.+++.......+ + ++.+ ++.+..-+..|++......++..+.++++++.+..+.+
T Consensus        20 ~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~-~-~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~   93 (290)
T TIGR00776        20 NVKIG-GGPYSQTL---GTTFGALILSIAIAIFV-L-PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPIST   93 (290)
T ss_pred             HhccC-CCHHHHHH---HHHHHHHHHHHHHHHHh-C-CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHH
Confidence            36544 44433333   66666666665443311 1 1111 12222223334445556688999999999999999988


Q ss_pred             -HHHHHHHHHHHHHcccCCCchhh----HHHHHHHHHhhhhhcccCcc-------cc-hHHHHHHHHHHHHHHHHHHHHH
Q 018843          112 -LTPLLVALADTAFRRQPCPSRLT----FLSLVIILGGAVGYVATDSG-------FT-LTAYSWAFAYLVTITTEMVYIK  178 (350)
Q Consensus       112 -~~pi~v~ll~~l~~~e~~~~~~~----~~~~~l~~~G~~l~~~~~~~-------~~-~~G~~~~l~s~~~~a~~~v~~k  178 (350)
                       +.++++.+++.+++||| +++++    +.++++.++|+.+....+.+       .+ ..|+++++.+.++|++|.+..|
T Consensus        94 ~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~  172 (290)
T TIGR00776        94 GFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAK  172 (290)
T ss_pred             HHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999 58999    99999999999997543211       33 6899999999999999999999


Q ss_pred             HHhhcCCCCcchhHHHHhH---H-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HH
Q 018843          179 HMVTNLGLNTWGFVLYNNL---L-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AA  253 (350)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  253 (350)
                      +.    +.++++..+.+..   . +.++.+..   . +..+           +.+...|..++ .|++ ..+.+..+ .+
T Consensus       173 ~~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~~~-----------~~~~~~~~~~~-~Gi~-~~ia~~~y~~~  231 (290)
T TIGR00776       173 AF----GVDGLSVLLPQAIGMVIGGIIFNLGH---I-LAKP-----------LKKYAILLNIL-PGLM-WGIGNFFYLFS  231 (290)
T ss_pred             Hc----CCCcceehhHHHHHHHHHHHHHHHHH---h-cccc-----------hHHHHHHHHHH-HHHH-HHHHHHHHHHH
Confidence            75    3566666443333   2 22222211   0 0000           11223344444 7787 46666666 88


Q ss_pred             hh-ccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhH----HHHHHHhhhhhhhcc
Q 018843          254 RK-AISATAFTVTGVVNKFLTVVINVLIWDKHASPFGL----ICLLVTIAGGVLYQQ  305 (350)
Q Consensus       254 i~-~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G~~li~~g~~~~~~  305 (350)
                      .+ +.++.+.++.+.++|+.+++++++++||+.+..|+    +|.++++.|+.+...
T Consensus       232 ~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       232 AQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            88 99999999999999999999999999999999999    999999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.75  E-value=1.4e-16  Score=140.99  Aligned_cols=214  Identities=18%  Similarity=0.176  Sum_probs=167.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc
Q 018843           74 FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS  153 (350)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~  153 (350)
                      +++..++..+++++.....+.+.++++++++++++++++..+++++++++++|||. ++++|.++.+.++|+++...++.
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~l-s~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRL-SRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHccc-chhhHHHHHHHHHHHheeecCCc
Confidence            45666777889999999999999999999999999999999999999999999997 89999999999999999654211


Q ss_pred             -----------------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHH
Q 018843          154 -----------------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV  216 (350)
Q Consensus       154 -----------------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (350)
                                       .....|++..++++++.++..++.++.+|+.+.+.|.+.......++++..+.... .|..+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence                             11247999999999999999999999999877777766655556665444444332 233222


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHH
Q 018843          217 FAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVT  296 (350)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li  296 (350)
                      .+.  ..++++ +...|..++..++.|...++    .+|+.+...-.....+..+++.++++.+||.++|....+|..++
T Consensus       172 ~~~--g~f~G~-~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  172 SES--GFFHGY-SWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             ccC--Cchhhc-chHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            110  001233 34456666666565555554    58999999999999999999999999999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.73  E-value=1.5e-16  Score=131.45  Aligned_cols=147  Identities=22%  Similarity=0.322  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCC-chhH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTN-----LGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWF-VPDV  232 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  232 (350)
                      |.++++.+.++.+++.++.|+..++     .+.+++++++|+++.+++++.+..+..++.............+.. ++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999987     588999999999999876666655555444322221111111121 4467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      +..++..|+++++.+++.+++++++||++.++.+.+|.+..+++|+++|||++|+.+++|+++.+.|+++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            8899999999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.71  E-value=2.6e-14  Score=125.12  Aligned_cols=271  Identities=14%  Similarity=0.091  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCc--ccCCCC--ChhhhhHHHHHHHHHHHHHH
Q 018843           17 GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGF--LHHDPF--TFDTAKKFLPAAFVFYLAIF   92 (350)
Q Consensus        17 ~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~   92 (350)
                      ..+..|.... .+-+..|.+- ..+ +..+...|.+.+...+.......+  +..+..  +++.+......+++...+..
T Consensus        11 ~~l~Ay~lwG-~lp~y~kll~-~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~   87 (293)
T COG2962          11 LALLAYLLWG-LLPLYFKLLE-PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW   87 (293)
T ss_pred             HHHHHHHHHH-HHHHHHHHHc-cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence            4445555544 4456678544 444 677999999888777776544221  111111  12223334455666666777


Q ss_pred             HhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHH
Q 018843           93 TNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITT  172 (350)
Q Consensus        93 ~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~  172 (350)
                      .+.+|.+.-..-.++.=...+|++.++++.+++|||+ ++.++++++++.+|+..-.....++++....+    ++++++
T Consensus        88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl-s~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~  162 (293)
T COG2962          88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL-SRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGL  162 (293)
T ss_pred             HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHH
Confidence            8889988777777888889999999999999999996 99999999999999999877777787765444    678899


Q ss_pred             HHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHH---HhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH
Q 018843          173 EMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWF---LTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF  249 (350)
Q Consensus       173 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (350)
                      |...-|++    +.++.+-.....+.   +.|+...   ..+|-+.   +..    . .+...+..++..|..+..--.+
T Consensus       163 Ygl~RK~~----~v~a~~g~~lE~l~---l~p~al~yl~~l~~~~~---~~~----~-~~~~~~~LLv~aG~vTavpL~l  227 (293)
T COG2962         163 YGLLRKKL----KVDALTGLTLETLL---LLPVALIYLLFLADSGQ---FLQ----Q-NANSLWLLLVLAGLVTAVPLLL  227 (293)
T ss_pred             HHHHHHhc----CCchHHhHHHHHHH---HhHHHHHHHHHHhcCch---hhh----c-CCchHHHHHHHhhHHHHHHHHH
Confidence            98776654    45554443333333   2333332   2223222   100    0 1334566666666665554333


Q ss_pred             HHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       250 ~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      -..+-|+.+=.+.++..+++|....+++++++||+++..++...+.+-+|..+|.....++
T Consensus       228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~  288 (293)
T COG2962         228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT  288 (293)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3378899999999999999999999999999999999999999999999999999876543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.68  E-value=9.6e-16  Score=137.54  Aligned_cols=224  Identities=18%  Similarity=0.181  Sum_probs=171.2

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc----
Q 018843           78 KKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS----  153 (350)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~----  153 (350)
                      |.-+..+.+.+...++++.||.|++++..+++.+++-+|+.+++.++..||+ +..+.+++++.++|++++.-+|.    
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f-t~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF-TLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh-hHHHHHHHHHhhccEEEEEeccccccc
Confidence            3345566677777888999999999999999999999999999999999997 99999999999999999876633    


Q ss_pred             ----ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcchhH-HHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCC
Q 018843          154 ----GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG-LNTWGFV-LYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGS  226 (350)
Q Consensus       154 ----~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  226 (350)
                          +....|.++++.+++.||+|.++.||...+++ --..++. .|..++..+ +.|...+.  +....      +.-.
T Consensus       239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL--~~~~~------e~F~  310 (416)
T KOG2765|consen  239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL--DFFGE------ERFE  310 (416)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH--HHhcc------Cccc
Confidence                23468999999999999999999999887663 1222222 244444332 33333332  11111      1011


Q ss_pred             CCchhHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          227 WFVPDVFFAVALSCVFGLLIS-FFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      .++......++..+.++++.+ |.+.++.-.++|++.++-..+...++.+...++=+.++|+.+++|..-+++|....++
T Consensus       311 lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  311 LPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             CCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence            223334455566666666655 7777999999999999999999999999999998999999999999999999999887


Q ss_pred             cccCC
Q 018843          306 SVTGP  310 (350)
Q Consensus       306 ~~~~~  310 (350)
                      ..+..
T Consensus       391 ~~~~~  395 (416)
T KOG2765|consen  391 SSENS  395 (416)
T ss_pred             ccccc
Confidence            76543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.58  E-value=4.6e-16  Score=132.53  Aligned_cols=275  Identities=17%  Similarity=0.143  Sum_probs=193.0

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHH
Q 018843            9 TKQYYTTSGLVVGYALCSSLLAVINKFAITK-FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVF   87 (350)
Q Consensus         9 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~-~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (350)
                      .|+.+....+-=.-..++...++.+.++-.+ .+.|..-++.-...-.++.-++..+|.    +.-+-.|++.+++++.-
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~D   88 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVD   88 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEe
Confidence            4444443333222233344556667776663 677776665555555555555444432    22233577788888877


Q ss_pred             HHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-------ccc-hHH
Q 018843           88 YLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-------GFT-LTA  159 (350)
Q Consensus        88 ~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-------~~~-~~G  159 (350)
                      +-..++-..|.||++....+.+.+-..+.+++++|+++|.|+ +..++.++++++.|++++..+|.       ..+ ..|
T Consensus        89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrY-rlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~G  167 (336)
T KOG2766|consen   89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRY-RLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKG  167 (336)
T ss_pred             ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHH-hhheeeeEEeEecceEEEEEeeeccccccCCCCCccC
Confidence            777788889999999999999999999999999999999998 78899999999999998655442       223 479


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843          160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS  239 (350)
Q Consensus       160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
                      +++++.++=+||..++..+.+.|  +.+..+.+....+.+.++..+-.+.  |......      -+| +   |-...+.
T Consensus       168 D~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~--~~~~~~t------l~w-~---~~i~~yl  233 (336)
T KOG2766|consen  168 DFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIF--ERHHVST------LHW-D---SAIFLYL  233 (336)
T ss_pred             cEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhh--hccceee------Eee-h---HHHHHHH
Confidence            99999999999999999999988  5566677666666665544444322  2211110      122 1   2222222


Q ss_pred             -HHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          240 -CVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       240 -~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                       ..+..+.-|... ..+|..|++...+.-...+..++++  ..||-+.+|...+..+.+..|.++|.
T Consensus       234 ~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  234 RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence             233444455555 6789999999988888888888877  56777899999999999999999994

>TIGR00803 nst UDP-galactose transporter

Probab=99.35  E-value=8.1e-12  Score=109.72  Aligned_cols=192  Identities=14%  Similarity=0.141  Sum_probs=131.1

Q ss_pred             cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------------------------
Q 018843          101 ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------------------------  153 (350)
Q Consensus       101 ~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------------------------  153 (350)
                      +++|.....++..++++++.++.+.+||+ ...++++..++..|++....+|.                           
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~-~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~   80 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQV-TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF   80 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceee-ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence            57788999999999999999999999998 58889999999999875221111                           


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhc--CCCCchh
Q 018843          154 GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASA--GSWFVPD  231 (350)
Q Consensus       154 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  231 (350)
                      ...+.|....+.++.+.++..++.++..|+++..     +|....++.+........++.....+..+...  .++ +..
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  154 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY-PTA  154 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC-chH
Confidence            1235677778888888899999999887654332     44433333221111111111111111111000  111 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhh
Q 018843          232 VFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY  303 (350)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~  303 (350)
                      .|..+    +.....+.+..+++|+.++.+.++...++++++.++|+++|||+++..++.|+.+++.|+.+|
T Consensus       155 ~~~~~----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVG----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHH----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33333    223333344557899999999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.23  E-value=3.2e-11  Score=99.38  Aligned_cols=221  Identities=10%  Similarity=0.058  Sum_probs=168.0

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc--c
Q 018843           77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--G  154 (350)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--~  154 (350)
                      .++.-|.+++..+..+.+..+++.++++.++.+..+.--++.+++++.++.|+ ...++++.++.+.|+++..+-|.  .
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~-~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRF-MGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccch-hhhhHHHHHHHhCcEEEEEeccchhh
Confidence            55667888888889999999999999999999999999999999999999997 88899999999999999886554  5


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-----HHHHHHHHHhccHHHHHHHHHHhcCCCCc
Q 018843          155 FTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-----IISPFFWFLTGEYGEVFAALVASAGSWFV  229 (350)
Q Consensus       155 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (350)
                      .++.|+..+++|+...|+|-++.|+...+.+.+.  ...+++-++.     .-+|...+.......+..+         .
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF---------A  200 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGD--AAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF---------A  200 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH---------h
Confidence            6789999999999999999999999987655543  2222322221     1222222221112211111         2


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          230 PDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      ...|..++..+.+..+.++....++..+.|...|+-.......-.....++=+-..+....+|..++..|.++......+
T Consensus       201 ~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  201 AAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            23466777777777888887778888889988888777777777777777766677888999999999999887655443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.19  E-value=1.3e-10  Score=89.11  Aligned_cols=135  Identities=17%  Similarity=0.177  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843          160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS  239 (350)
Q Consensus       160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
                      .++++.+++++++..++.|--.+  +.||.-.+..-+...+..+....+..+++...         .-.++..|..++.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~---------~~~~~k~~lflilS   73 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG---------GEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc---------cccCcceehhhhHH
Confidence            58999999999999999998777  45555455555555444444444555655432         11266788999999


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      |+.+...-++.|+++|+-.++.+....-..+++++++|+.+++|++|..+|+|++++.+|.++...
T Consensus        74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            976666667777999999999999999999999999999999999999999999999999987543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.12  E-value=6.5e-10  Score=87.97  Aligned_cols=118  Identities=17%  Similarity=0.191  Sum_probs=94.9

Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc-CCCCChhhhhHHHHHHHH-HHHHHHHhhhhhhccchhHH
Q 018843           29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH-HDPFTFDTAKKFLPAAFV-FYLAIFTNTNLLRHANVDTF  106 (350)
Q Consensus        29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~  106 (350)
                      ....+|...++.+ |....++|+..+.+ +........++ .++.+++.+......+++ ......+.+.++++.+++..
T Consensus         6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            3566788888876 88999999999987 44433322222 244556666677777777 46668889999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843          107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV  149 (350)
Q Consensus       107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~  149 (350)
                      +.+.++.|+++.+++++++||+ ++++++.++++.+.|+.++.
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999 59999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.01  E-value=1.2e-09  Score=86.34  Aligned_cols=124  Identities=16%  Similarity=0.280  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 018843          168 VTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLIS  247 (350)
Q Consensus       168 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (350)
                      ++++.+.++.|+..++  .++.....+....+.+ ..+.....+..+ .        .. .+...+......++++....
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~--------~~-~~~~~~~~~~~~~~~~~~~~   67 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F--------KN-LSPRQWLWLLFLGLLGTALA   67 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c--------cC-CChhhhhhhhHhhccceehH
Confidence            4678899999998884  6788888888888665 333332222221 1        11 14445666677777765555


Q ss_pred             H-HHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          248 F-FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       248 ~-~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      + ..++++++.++...+...+++|+++.++++++++|++++.+++|+++++.|+.+..
T Consensus        68 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   68 YLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4 44599999999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.00  E-value=3.4e-09  Score=82.78  Aligned_cols=105  Identities=20%  Similarity=0.165  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHHhCccc---CCCCChhhhhHHHHHHHHHH-HHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHH
Q 018843           48 ALQYLTSALGVWVLGKFGFLH---HDPFTFDTAKKFLPAAFVFY-LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA  123 (350)
Q Consensus        48 ~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l  123 (350)
                      .+|+..+.+.+......+++.   .+.++++++..++..+++.. ....+++.++++.+ +....+.+++|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            467777777777654443211   11222333444455566665 66788999999999 58889999999999999999


Q ss_pred             HcccCCCchhhHHHHHHHHHhhhhhcccCcc
Q 018843          124 FRRQPCPSRLTFLSLVIILGGAVGYVATDSG  154 (350)
Q Consensus       124 ~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~  154 (350)
                      ++|||+ +++++.++.++++|+++...+|.+
T Consensus        81 ~~~er~-~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERL-SPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCC-CHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999996 899999999999999999887754

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.92  E-value=1.9e-08  Score=77.43  Aligned_cols=119  Identities=12%  Similarity=0.112  Sum_probs=98.1

Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc--CCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHH
Q 018843           29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH--HDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTF  106 (350)
Q Consensus        29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~  106 (350)
                      -.+..|..+++.+ |.+-+..|.++....+........+.  ....+++.+..+..-|+.......+++.|++--.+|..
T Consensus        18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V   96 (140)
T COG2510          18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV   96 (140)
T ss_pred             HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence            3566798888777 99999999998888887765533322  22356666666667777677778899999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843          107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV  149 (350)
Q Consensus       107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~  149 (350)
                      .-+..++|+++.++++++++|| ++.++|+++.+.++|+++++
T Consensus        97 vPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999 59999999999999998865

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.81  E-value=3.2e-07  Score=84.16  Aligned_cols=138  Identities=10%  Similarity=0.077  Sum_probs=101.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843          156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA  235 (350)
Q Consensus       156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (350)
                      ...|..+.+.++++++...+..|.. .  +.++.+...+...++.+++.+.....++.......       ..+...+..
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~   75 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-------IQTPQKIFM   75 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-------HcCHHHHHH
Confidence            4579999999999999999999764 3  57888899998888765333333333332221110       002223333


Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          236 VALSCVFGLLI-SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       236 ~~~~~~~~~~~-~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      .. .+.+.... ..+.++++++.++...++..+..|++..++++++++|+++..+++|+++.++|+.+..
T Consensus        76 ~~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         76 LA-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            33 33444444 4455599999999999999999999999999999999999999999999999998754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.80  E-value=1.7e-06  Score=76.71  Aligned_cols=214  Identities=13%  Similarity=0.120  Sum_probs=149.6

Q ss_pred             CCCCh--hhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhH----HHHHHHH
Q 018843           70 DPFTF--DTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTF----LSLVIIL  142 (350)
Q Consensus        70 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~----~~~~l~~  142 (350)
                      +.++.  +.+.--+..|++.......++.+.++..+|.+.=+ ...+.+.+.+.++++++|- ++..++    .++++.+
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW-~~~~~~~~G~~Al~lii  114 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW-TTTTQKIIGFLALVLII  114 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC-CCcchHHHHHHHHHHHH
Confidence            34443  55555667788888889999999999888776544 3677888999999999995 454444    4788888


Q ss_pred             HhhhhhcccCccc--------chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHH
Q 018843          143 GGAVGYVATDSGF--------TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYG  214 (350)
Q Consensus       143 ~G~~l~~~~~~~~--------~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (350)
                      +|+.+.+..|.+.        ...|+...+++.+.|..|.+..|..    +.++++..+=+++-..+...+..... + .
T Consensus       115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~-~-~  188 (269)
T PF06800_consen  115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS-K-K  188 (269)
T ss_pred             HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc-c-c
Confidence            9999977654322        2359999999999999999998763    55676665544433221112221211 1 1


Q ss_pred             HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchh----hH
Q 018843          215 EVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPF----GL  290 (350)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~----~~  290 (350)
                      ..           .+...| .=...|++-...+.+.+.+.++.+..+.=..+-+..+.+.+.|.+++||.=+..    .+
T Consensus       189 ~~-----------~~k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  189 PF-----------FEKKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             cc-----------cccchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            00           011222 224455666666777778889999999999999999999999999999998866    45


Q ss_pred             HHHHHHhhhhhh
Q 018843          291 ICLLVTIAGGVL  302 (350)
Q Consensus       291 ~G~~li~~g~~~  302 (350)
                      +|.++++.|..+
T Consensus       257 ~G~~Liv~G~il  268 (269)
T PF06800_consen  257 IGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHhhhc
Confidence            688888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.72  E-value=1.7e-07  Score=85.29  Aligned_cols=130  Identities=11%  Similarity=0.111  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-HHHHHHHHHh--ccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-IISPFFWFLT--GEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      .++.+.+++++|.+.+++|+..+++  ++  ...+...... ++.|......  .++.            ..+...|...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~~~~~   66 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQVGWS------------RLPATFWLLL   66 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhcccCCCC------------CcchhhHHHH
Confidence            5678999999999999999887642  22  2344444433 3334332210  0111            0122344555


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      +..++......++.+.+.++.++...++..+..|+++.++++++++|+++..+++|+.+++.|+.+...
T Consensus        67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            566666666777777999999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=98.71  E-value=9.7e-07  Score=79.19  Aligned_cols=140  Identities=11%  Similarity=0.056  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843          158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA  237 (350)
Q Consensus       158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (350)
                      .|..++++++++++...+..|. ..  +.++.+..++-.+++.+++.+.....++.....+..+    .......+....
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   74 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK----RIQKRPLILSLL   74 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHh----CcccchHHHHHH
Confidence            3889999999999999999997 44  5789999999888876554333322233221111110    000112244555


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      ..+++......+.+++++++++...++..+..|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            6666655555555689999999999999999999999999999999999999999999999988653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.54  E-value=6.6e-06  Score=73.80  Aligned_cols=119  Identities=16%  Similarity=0.019  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHH-HHHHHHhhhhhhccch
Q 018843           26 SSLLAVINKFAITKFNY-PGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVF-YLAIFTNTNLLRHANV  103 (350)
Q Consensus        26 s~~~~~~nK~~~~~~~~-p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~s~  103 (350)
                      -....+..|...++.+. +.....+++.++.+++.+.......+ +..+.+++...+..+++. .....+++.++++.++
T Consensus       140 ~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  218 (260)
T TIGR00950       140 FALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDP  218 (260)
T ss_pred             HHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            44445667877765542 33455578888888877765543222 222444455555566664 4456779999999999


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhh
Q 018843          104 DTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAV  146 (350)
Q Consensus       104 s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~  146 (350)
                      +..+.+.++.|++.+++++++++|+ ++..++.+..+.++|+.
T Consensus       219 ~~~s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       219 SAASILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAVL  260 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999 58999999999999863

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.44  E-value=6.1e-06  Score=77.43  Aligned_cols=136  Identities=14%  Similarity=0.255  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-HHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-IISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA  237 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (350)
                      =+..++...++|+.+.++.|..++ .+.++.....|-..++. +++++......+. ..        +. .+...|..+.
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~--------~~-~~~~~~~~l~   82 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SL--------PP-LSVSILSKIG   82 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-cc--------Cc-chHHHHHHHH
Confidence            456777888999999999999886 48888888888777754 3444433221100 00        00 0223455666


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc------cCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI------WDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~------~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      ..|++++..+...+.++++++|...++..++.|+++.++++++      ++|+++..+++|+++.++|+.+...
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            6777774444455689999999999999999999999999999      6999999999999999999987653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.38  E-value=1.2e-05  Score=62.67  Aligned_cols=104  Identities=18%  Similarity=0.303  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHH
Q 018843          197 LLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVV  275 (350)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~  275 (350)
                      ..+.+.++......++..+..+.+.       . ..+...+..|+++...++..+ ++.++.++ ..+....+.|+++.+
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~l   76 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALR-------R-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTAL   76 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHH-------h-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHH
Confidence            3444444444444455555443322       1 223445555666664445554 88999995 777999999999999


Q ss_pred             HHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          276 INVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       276 ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      +++++++|+++..+++|..++++|+.+..+.+.+
T Consensus        77 l~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   77 LSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999998876554

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.35  E-value=2.7e-05  Score=61.83  Aligned_cols=121  Identities=13%  Similarity=0.142  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843          158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA  237 (350)
Q Consensus       158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (350)
                      .|+++.+.+.++.+.-.++.|+-.++.+.  .+...    ...   .......                  ++   ...+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~----~~~---~~~~~~~------------------~p---~~~i   51 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAW----DFI---AALLAFG------------------LA---LRAV   51 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchh----HHH---HHHHHHh------------------cc---HHHH
Confidence            47888999999998888888876664332  11100    000   0000000                  11   1234


Q ss_pred             HHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHH--ccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843          238 LSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVL--IWDKHASPFGLICLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       238 ~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~--~~~e~~t~~~~~G~~li~~g~~~~~~~~~  308 (350)
                      +.|+...+.++..+ .++++.+...........++...+.++.  +|||++|+.+++|++++++|+++.+..++
T Consensus        52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            55666777776666 8999999999999888888888777875  89999999999999999999999875433

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.33  E-value=5.5e-06  Score=75.74  Aligned_cols=215  Identities=15%  Similarity=0.180  Sum_probs=115.7

Q ss_pred             HHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc---Ccc-cch----
Q 018843           86 VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT---DSG-FTL----  157 (350)
Q Consensus        86 ~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~---~~~-~~~----  157 (350)
                      ++..+...+..|+.+.|.+..+-+..+..++..+++..++|||+ +++++.+..++++|..++...   +.+ .+.    
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~-~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL-TRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc-hHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            34555678889999999999999999999999999999999996 899999999999999875421   111 110    


Q ss_pred             -----HHH-HHHHH-HHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCch
Q 018843          158 -----TAY-SWAFA-YLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVP  230 (350)
Q Consensus       158 -----~G~-~~~l~-s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (350)
                           .+. .+... ..++..+.....+|..+ .  +   ...|...++.+ .....+.........+..-.......++
T Consensus       138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~-~--~---i~vyi~i~sl~-Gs~tvl~~K~i~~~i~~~~~g~~~f~~~  210 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLVLILILIFFIKPRYGR-R--N---ILVYISICSLI-GSFTVLSAKAISILIKLTFSGDNQFTYP  210 (300)
T ss_pred             HHhcCcceehhHHHHHHHHHHHHHhhcchhcc-c--c---eEEEEEEeccc-cchhhhHHHHHHHHHHHHhcCchhhhhh
Confidence                 111 11111 11111111111111111 1  1   12222222210 0000000000000000000000011244


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-HHHHHHHHHHccCC--CCchh----hHHHHHHHhhhhhhh
Q 018843          231 DVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVN-KFLTVVINVLIWDK--HASPF----GLICLLVTIAGGVLY  303 (350)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~-~v~~~~ls~~~~~e--~~t~~----~~~G~~li~~g~~~~  303 (350)
                      ..|..++...+....-.+....++++.+++......+.- ...+++-|.++|+|  ..++.    ...|..+++.|+.+.
T Consensus       211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (300)
T PF05653_consen  211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL  290 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence            455555444444444445666899988886655444433 34556667778885  44553    455788889998887


Q ss_pred             ccccc
Q 018843          304 QQSVT  308 (350)
Q Consensus       304 ~~~~~  308 (350)
                      +..|.
T Consensus       291 ~~~~~  295 (300)
T PF05653_consen  291 SSSKD  295 (300)
T ss_pred             eccCc
Confidence            64443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.25  E-value=3.9e-05  Score=59.40  Aligned_cols=63  Identities=24%  Similarity=0.251  Sum_probs=56.9

Q ss_pred             HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843           87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA  150 (350)
Q Consensus        87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~  150 (350)
                      +....++...+++..|.+.+..+.++.++++.+++++++|||+ +.+++.++.+.++|++++..
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l-s~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV-SPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhc
Confidence            4445677889999999999999999999999999999999995 99999999999999988653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.16  E-value=9.1e-05  Score=65.67  Aligned_cols=140  Identities=15%  Similarity=0.148  Sum_probs=110.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843          156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA  235 (350)
Q Consensus       156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (350)
                      +..|+++.+.+-+.++..-.+.|-+ +  +.++.++..+-.+.+.+...+......++.+..+..       .++..+..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~-------~~p~~~~~   74 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLL-------KQPKTLLM   74 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-------hCcHHHHH
Confidence            4579999999999999999888755 4  567778888888888766665555555666665432       25555555


Q ss_pred             HHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          236 VALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       236 ~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      +... ..-...|...| |+..+-.....|.--+++|++.+++|.++++|+++..|++...+..+|+..-.+.
T Consensus        75 ~~l~-a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          75 LALT-ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHH-HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            5444 34455677777 9999999999999999999999999999999999999999999999999986554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.10  E-value=0.00026  Score=64.83  Aligned_cols=121  Identities=17%  Similarity=0.159  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHH-HHHhhhhhhccchh
Q 018843           26 SSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLA-IFTNTNLLRHANVD  104 (350)
Q Consensus        26 s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~s~s  104 (350)
                      .....++.|...++.+ |.... +..+.+.+.+.+....... ....+...+...+..+++.... ..++++++++.+++
T Consensus       160 ~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~  236 (293)
T PRK10532        160 WAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTR  236 (293)
T ss_pred             HHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            3344455566655444 55554 4445555555544333211 1122333333334555554433 55789999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843          105 TFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA  150 (350)
Q Consensus       105 ~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~  150 (350)
                      .++++..+.|++..++++++++|+ ++..++.+..+.++|++....
T Consensus       237 ~as~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        237 TFGTLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999 599999999999999988653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.08  E-value=0.00024  Score=64.99  Aligned_cols=108  Identities=16%  Similarity=0.078  Sum_probs=80.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcccCC-CCChhhhhHHHHHHHHHH-HHHHHhhhhhhccchhHHHHHHhHHHHHHHHH
Q 018843           43 PGLLTALQYLTSALGVWVLGKFGFLHHD-PFTFDTAKKFLPAAFVFY-LAIFTNTNLLRHANVDTFIVFRSLTPLLVALA  120 (350)
Q Consensus        43 p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll  120 (350)
                      +...+.+++.++..++.+.......... ..+.+.+..+...+++.. ....+++.++++.+++..+++..+.|++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~  256 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL  256 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            5556778888887776665433211111 113344555555566533 44567999999999999999999999999999


Q ss_pred             HHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843          121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVAT  151 (350)
Q Consensus       121 ~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~  151 (350)
                      ++++++|+ ++..++.+.++.+.|+.+....
T Consensus       257 ~~~~l~E~-~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        257 GTGLGGET-LSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHcCCC-CcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999 5999999999999999887644

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.02  E-value=0.00013  Score=68.54  Aligned_cols=134  Identities=10%  Similarity=0.167  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCC-cchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCC-chhHHHHHH
Q 018843          160 YSWAFAYLVTITTEMVYIKHMVTNLGLN-TWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWF-VPDVFFAVA  237 (350)
Q Consensus       160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  237 (350)
                      ..+.+.--.+...+.+..|...+.  .+ |+.+..++..++.++..+.... + ....        +... ....|..++
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~--------~~~~~~~~~~~~ll  118 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-G-FRKI--------PRIKSLKLFLKNFL  118 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-C-CCCC--------CCCCCHHHHHHHHH
Confidence            344444444445667788888874  45 8888888888765433332221 1 1000        0111 112456777


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      ..|+++....+..+.++++++++..++...+.|++++++++++++|+++..+++|++++++|+.+...
T Consensus       119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            77888877766666899999999999999999999999999999999999999999999999998653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.99  E-value=0.00025  Score=64.96  Aligned_cols=77  Identities=17%  Similarity=0.138  Sum_probs=63.0

Q ss_pred             ChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843           73 TFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA  150 (350)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~  150 (350)
                      +.+.+...+..++......++++.++++.+++..+.+.++.|++..++++++++|+ ++..++++.++++.|+.+...
T Consensus       211 ~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        211 SLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhh
Confidence            44444444444444444467799999999999999999999999999999999999 599999999999999987653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.88  E-value=0.00011  Score=56.94  Aligned_cols=63  Identities=14%  Similarity=0.120  Sum_probs=54.5

Q ss_pred             HHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          242 FGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       242 ~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      +....++..+ .++++.+.........+.++.+.++|+++|||++|+.+++|+.++++|+.+..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4444444444 88999999999988889999999999999999999999999999999998754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.85  E-value=0.00058  Score=62.84  Aligned_cols=132  Identities=15%  Similarity=0.065  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCC--cchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 018843          168 VTITTEMVYIKHMVTNLGLN--TWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLL  245 (350)
Q Consensus       168 ~~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (350)
                      .++..+.++++++.++....  ++-+++.|.....+.......... ..           . .+...+.-....+++-..
T Consensus        10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~-----------~-~~~~~~~~~~~~~~~~~~   76 (303)
T PF08449_consen   10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FP-----------K-SRKIPLKKYAILSFLFFL   76 (303)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-cc-----------C-CCcChHHHHHHHHHHHHH
Confidence            34456778888888765545  555555555554332222222211 00           0 011223444455566667


Q ss_pred             HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843          246 ISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA  312 (350)
Q Consensus       246 ~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~  312 (350)
                      .....+.++++.+-.+..+....+++...+++.++++++.+..++++..++.+|+.+....+.++++
T Consensus        77 ~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   77 ASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            7777788999999999999999999999999999999999999999999999999999877665443

; GO: 0055085 transmembrane transport

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.84  E-value=0.00054  Score=62.89  Aligned_cols=124  Identities=15%  Similarity=0.090  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 018843          161 SWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC  240 (350)
Q Consensus       161 ~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (350)
                      .+.++++++|+...+..|...+  +.++.....+-..++.+.+..  +...+.             . +   +......|
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~--~~~~~~-------------~-~---~~~~~~~g   65 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIF--FVARPK-------------V-P---LNLLLGYG   65 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHH--HhcCCC-------------C-c---hHHHHHHH
Confidence            5678899999999999998776  578888877766664322211  111110             0 1   11222333


Q ss_pred             HHHHHHHHH-HHHHhhc-cchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          241 VFGLLISFF-GFAARKA-ISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       241 ~~~~~~~~~-~~~~i~~-~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                      +.....++. .+.+.++ .++...++.....|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         66 LTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            433333332 3356666 5778889899999999999999999999999999999999999987764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.82  E-value=0.00031  Score=64.57  Aligned_cols=124  Identities=10%  Similarity=0.045  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 018843          169 TITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISF  248 (350)
Q Consensus       169 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (350)
                      +...++++.|...++ -..|+.+...+...+.+...+.... +....         +.. +...|..++..|++......
T Consensus        13 ~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~-~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817        13 LNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLLSWSS-GLPKR---------LKI-SSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             HHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCC---------CCC-CHHHHHHHHHHHHHHHHHHH
Confidence            333445667877763 2456666666655554332222110 10000         011 23345666667777655555


Q ss_pred             HHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          249 FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       249 ~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      ..+.+++++++...++...+.|+++.++++++++|+++..+++|..++++|+.+..
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            55699999999999999999999999999999999999999999999999998643

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.77  E-value=0.00094  Score=61.78  Aligned_cols=77  Identities=17%  Similarity=0.219  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      |+--+..+++=...+|....+.++++.+..++......+++.++|+++++++.++.|++|+.+.++|+.+.......
T Consensus        79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            44444457888899999999999999999999999999999999999999999999999999999999987766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.74  E-value=0.00026  Score=55.24  Aligned_cols=67  Identities=21%  Similarity=0.290  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHH-HHhhccchh-HHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843          241 VFGLLISFFGF-AARKAISAT-AFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV  307 (350)
Q Consensus       241 ~~~~~~~~~~~-~~i~~~sa~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~  307 (350)
                      +.....++..+ .++|+.+.. ..++..-+..+.+++.|+++|||++|+.+++|+.++++|++..+...
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            44445554444 778888764 45677788999999999999999999999999999999999875443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.66  E-value=0.0031  Score=51.52  Aligned_cols=122  Identities=19%  Similarity=0.170  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHhc-----C-CchHHHHHHHHHHHHHHHHHHHHh-CcccCC----CC-------ChhhhhHHHHHHHHH
Q 018843           26 SSLLAVINKFAITK-----F-NYPGLLTALQYLTSALGVWVLGKF-GFLHHD----PF-------TFDTAKKFLPAAFVF   87 (350)
Q Consensus        26 s~~~~~~nK~~~~~-----~-~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~----~~-------~~~~~~~~~~~~~~~   87 (350)
                      +..-.+..|..+++     . ..|..+..+....+.+++.+.... +..+..    ..       +.+.+..++..+++.
T Consensus        12 ~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (153)
T PF03151_consen   12 SALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA   91 (153)
T ss_pred             HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH
Confidence            44444555666654     2 236677777777777777765442 222110    01       112233344455556


Q ss_pred             HHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhh
Q 018843           88 YLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGY  148 (350)
Q Consensus        88 ~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~  148 (350)
                      ....+..+..++++++-+++++.....+.+.++++++++|++ +..++.|+.+.++|+.+-
T Consensus        92 ~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~-t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   92 FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI-TPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC-CHHHHHHHHHHHHHHhee
Confidence            666777889999999999999999999999999999999995 999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.62  E-value=0.057  Score=50.20  Aligned_cols=226  Identities=12%  Similarity=0.018  Sum_probs=132.0

Q ss_pred             CChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCC-------chhhHHHHHHHHH
Q 018843           72 FTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCP-------SRLTFLSLVIILG  143 (350)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~-------~~~~~~~~~l~~~  143 (350)
                      .+.+.+.--+..|++......++..+.+|+.++...-+ ..++.+...++..++++| .+       ......++++.++
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~ge-w~~~~~t~~g~~~~~gv~lili  146 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGN-FDVLLATNGGRMTLLGVLVALI  146 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccc-cccccccchHHHHHHHHHHHHH
Confidence            34445555566777788888889999999998887655 577788888888888886 22       1335688888999


Q ss_pred             hhhhhcc----cCc--------ccc-hHHHHHHHHHHHHHHHHHH-------HHHHHhhcCCCCcchhHHHHhH---HHH
Q 018843          144 GAVGYVA----TDS--------GFT-LTAYSWAFAYLVTITTEMV-------YIKHMVTNLGLNTWGFVLYNNL---LSL  200 (350)
Q Consensus       144 G~~l~~~----~~~--------~~~-~~G~~~~l~s~~~~a~~~v-------~~k~~~~~~~~~~~~~~~~~~~---~~~  200 (350)
                      |+++...    .|.        +++ ..|+.+.+++.+.++.|..       ..+.. ...+.+++....-+..   .+.
T Consensus       147 Gi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~  225 (345)
T PRK13499        147 GVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGG  225 (345)
T ss_pred             HHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHH
Confidence            9999765    332        122 3799999999999999993       33322 1124444333222222   111


Q ss_pred             HHHHHH-HHH---h-ccHHHHHHHHHHhcCCCCc---hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH----HHHHH
Q 018843          201 IISPFF-WFL---T-GEYGEVFAALVASAGSWFV---PDVFFAVALSCVFGLLISFFGFAARKAISATAFT----VTGVV  268 (350)
Q Consensus       201 ~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s----~~~~l  268 (350)
                      .+.-+. ...   . .+.....+.     .. ..   ..........|+.-...++....+-++.+.....    +...+
T Consensus       226 ~~~n~~~~~~~~~k~~~~~~~~~~-----~~-~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~  299 (345)
T PRK13499        226 AITNLGFCFIRLAKNKDLSLKADF-----SL-AKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSF  299 (345)
T ss_pred             HHHHHHHHHHHHhhCCCcccchhc-----cc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccH
Confidence            111100 010   1 111000000     00 00   1223333444454444444444555555433222    33356


Q ss_pred             HHHHHHHHHHHccCCCCc------hhhHHHHHHHhhhhhhhccc
Q 018843          269 NKFLTVVINVLIWDKHAS------PFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       269 ~~v~~~~ls~~~~~e~~t------~~~~~G~~li~~g~~~~~~~  306 (350)
                      .-+++.+.|. +++|.=+      ...++|.++++.|..+....
T Consensus       300 ~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        300 YVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            6688888888 4888766      56789999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.57  E-value=0.001  Score=60.74  Aligned_cols=131  Identities=12%  Similarity=0.091  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL  238 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (350)
                      |+++.++++++|+...+..|+..   +.++.+..  -..++..+.........+.            ....+..+..-..
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~------------~~~~~~~~~~g~l   64 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLP------------EFWALSIFLVGLL   64 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCC------------cccccHHHHHHHH
Confidence            67889999999999999998764   33332222  1222332222222211110            0112345555566


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHHHHHHHHHHccCCCCchhh----HHHHHHHhhhhhhhccc
Q 018843          239 SCVFGLLISFFGFAARKAISATAFTVTGV-VNKFLTVVINVLIWDKHASPFG----LICLLVTIAGGVLYQQS  306 (350)
Q Consensus       239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~----~~G~~li~~g~~~~~~~  306 (350)
                      .|++-...+++.+.++++.+....-...+ +.++...+++.+++||..+..+    ++|.+++++|+.+....
T Consensus        65 ~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        65 SGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            66666667777789999999988877777 8888999999999999999999    99999999999887544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.55  E-value=0.00063  Score=52.38  Aligned_cols=67  Identities=13%  Similarity=0.168  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843          241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV  307 (350)
Q Consensus       241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~  307 (350)
                      +.....++..+ .++|+.+- ...++..-+..+.+++.|+++|||++|+.+++|+.+++.|++..+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44455555444 77888876 456777889999999999999999999999999999999999986543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.49  E-value=0.0013  Score=59.20  Aligned_cols=218  Identities=11%  Similarity=0.159  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcc---c-c
Q 018843           81 LPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSG---F-T  156 (350)
Q Consensus        81 ~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~---~-~  156 (350)
                      +..-+.+..+-..++.|..+.|.+..+-+.++..+...+++..++|||+ +....++..++++|..+.....+.   . +
T Consensus        68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl-~~~g~lGc~l~v~Gst~iV~haP~e~~i~t  146 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKL-NLLGILGCVLCVVGSTTIVIHAPKEQEIES  146 (335)
T ss_pred             HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHH-HHhhhhheeEEecccEEEEEecCccccccc
Confidence            3333345555677899999999999999999999999999999999997 899999999999999886543221   1 0


Q ss_pred             ---------hHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHH-HHHHhcC
Q 018843          157 ---------LTAYS-WAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFA-ALVASAG  225 (350)
Q Consensus       157 ---------~~G~~-~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  225 (350)
                               -.+++ +...-.+...+-..+.|   ++++.  ..++.|..+++++- ....+..-......+ .++. ..
T Consensus       147 ~~el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g~--tnilvyi~i~s~iG-S~tV~svKalg~aiklt~~g-~~  219 (335)
T KOG2922|consen  147 VEEVWELATEPGFLVYVIIIILIVLILIFFYA---PRYGQ--TNILVYIGICSLIG-SLTVMSVKALGIAIKLTFSG-NN  219 (335)
T ss_pred             HHHHHHHhcCccHHHHHHHHHHHHHHHheeec---ccccc--cceeehhhHhhhhc-ceeeeeHHHHHHHHHHHhcC-Cc
Confidence                     01211 11111111111111111   11121  12344555554320 000000000111111 1110 01


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH-HHHHHHHHHHHccCC--CCchh----hHHHHHHHhh
Q 018843          226 SWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVV-NKFLTVVINVLIWDK--HASPF----GLICLLVTIA  298 (350)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l-~~v~~~~ls~~~~~e--~~t~~----~~~G~~li~~  298 (350)
                      +...+..|..++....+...-......+++..++..++...++ =..+++.-|.++|.|  ..+..    ...|...++.
T Consensus       220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~  299 (335)
T KOG2922|consen  220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFL  299 (335)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhh
Confidence            1223344444444433333333344578887777666655554 345556667777763  44544    4568888899


Q ss_pred             hhhhhccc
Q 018843          299 GGVLYQQS  306 (350)
Q Consensus       299 g~~~~~~~  306 (350)
                      |+.+....
T Consensus       300 G~flL~~~  307 (335)
T KOG2922|consen  300 GIFLLHRT  307 (335)
T ss_pred             eeeEeeee
Confidence            98887533

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.44  E-value=0.0054  Score=55.41  Aligned_cols=141  Identities=16%  Similarity=0.082  Sum_probs=89.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      ..+....+...+.++......|...++ ..+......+.......+ ....... +.....       +.  ....+...
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-------~~--~~~~~~~~   73 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALL-LLPLLLL-EPRGLR-------PA--LRPWLLLL   73 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHH-HHHHHHh-hccccc-------cc--ccchHHHH
Confidence            356777777888888888888877663 233333333333333322 1111110 110000       00  11122333


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH-HccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINV-LIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~-~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      +..++......+..+.+++++++...+......|++..++++ ++++|++++.++.|..+.+.|+.+.......
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            333333444445555889999999999999999999999997 6679999999999999999999988765544

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.42  E-value=0.0009  Score=59.41  Aligned_cols=79  Identities=20%  Similarity=0.277  Sum_probs=68.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843          231 DVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      ........-+++..+-+...+.++++.+|.+..+....|.+++.++++++++++++..||++..+..+|+.+.......
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3445556666777888888889999999999999999999999999999999999999999999999999987655444

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.0017  Score=49.13  Aligned_cols=64  Identities=23%  Similarity=0.319  Sum_probs=54.2

Q ss_pred             HHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          243 GLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       243 ~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      +...+|... .++|+.+- +..++.+-+..+.+++.|+++|+|++|+.+++|+.++++|+...+..
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            444555444 77888876 56799999999999999999999999999999999999999987654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.26  E-value=0.0025  Score=50.65  Aligned_cols=72  Identities=18%  Similarity=0.097  Sum_probs=60.0

Q ss_pred             HHHHHHH-HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHH--HcccCCCchhhHHHHHHHHHhhhhhcccC
Q 018843           80 FLPAAFV-FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA--FRRQPCPSRLTFLSLVIILGGAVGYVATD  152 (350)
Q Consensus        80 ~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l--~~~e~~~~~~~~~~~~l~~~G~~l~~~~~  152 (350)
                      ++..++. +....++.+.+++..|.+.+.-+.+..++.+.+.++.  +++|++ +..+++++++.++|+.++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l-s~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF-SLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHhccCC
Confidence            3444444 4555778999999999999999999999989888885  899996 9999999999999999987543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.22  E-value=0.019  Score=46.17  Aligned_cols=131  Identities=14%  Similarity=0.137  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843          160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS  239 (350)
Q Consensus       160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
                      .++++.+-.+-++...+..++.++.+ +++...+.+...+.+......+..++. +..+        ..+.++ +..+ .
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~--------~~~~p~-w~~l-G   70 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLAS--------LSSVPW-WAYL-G   70 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccch--------hccCCh-HHhc-c
Confidence            45667777777788888877777443 577777777777766555555554443 2211        112223 3332 7


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc--c---CCCCchhhHHHHHHHhhhhhh
Q 018843          240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI--W---DKHASPFGLICLLVTIAGGVL  302 (350)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~--~---~e~~t~~~~~G~~li~~g~~~  302 (350)
                      |+++...-++....+++.++...........+...++=--+  |   .+++++...+|..+++.|+.+
T Consensus        71 G~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   71 GLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            88888888888889999999999888888776665533332  3   378899999999999999863

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.20  E-value=0.0026  Score=48.84  Aligned_cols=64  Identities=22%  Similarity=0.326  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      +.....+|... .++|+.+. ...++..-+..+.+++.|+++|+|++|+.+++|+.+++.|+...+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34444554444 77888886 567899999999999999999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.17  E-value=0.0034  Score=49.03  Aligned_cols=72  Identities=11%  Similarity=0.138  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843           79 KFLPAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT  151 (350)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~  151 (350)
                      ......+++....++...+++++|.+.+..+- ...-+.+.+.++++++|++ +..+++++.+.++|++.....
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~-s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL-SLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHhhcC
Confidence            34455556667788899999999999988774 6899999999999999996 999999999999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.15  E-value=0.0032  Score=48.03  Aligned_cols=64  Identities=22%  Similarity=0.306  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      +.+...+|... .++|+.+. ...++..-+..+.+++.|+++|+|++|+.+++|+.+++.|+...+
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33444454444 77888876 567999999999999999999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.10  E-value=0.01  Score=44.92  Aligned_cols=70  Identities=16%  Similarity=0.215  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843           81 LPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT  151 (350)
Q Consensus        81 ~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~  151 (350)
                      ...-+++....++...+++++|.+++-.+ .....+.+.+.++++++|+. +..+++++.+.++|++.....
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l-~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL-SLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC-CHHHHHHHHHHHHHHHHhhhc
Confidence            33444455567778899999999987665 57788899999999999996 899999999999999987544

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.05  E-value=0.014  Score=44.44  Aligned_cols=68  Identities=15%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843           82 PAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA  150 (350)
Q Consensus        82 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~  150 (350)
                      ..-+++....++-..+++.+|.+++-.+- ....+.+.+.+++++||+. +..+++++.+.++|++....
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~-~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA-SPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHhhhc
Confidence            34445566677888999999999977665 5889999999999999995 99999999999999998753

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.97  E-value=0.018  Score=44.39  Aligned_cols=68  Identities=10%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843           83 AAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT  151 (350)
Q Consensus        83 ~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~  151 (350)
                      .-+++....++...+++++|.+.+..+. ...-+.+.+.++++++|+. +..++.++.+.++|+++....
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~-~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL-DLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence            3444555567788999999999988885 5789999999999999995 999999999999999998654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.91  E-value=0.0003  Score=60.75  Aligned_cols=217  Identities=9%  Similarity=0.070  Sum_probs=139.7

Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhh----HHHHHHHHHh
Q 018843           70 DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLT----FLSLVIILGG  144 (350)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~----~~~~~l~~~G  144 (350)
                      |..+.+.+---+.-+++.......++.+.++..+|.+.=+ .....+-+.+++++.++|= ++..+    ..++++.+.|
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG  130 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIG  130 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHh
Confidence            3445555555556677788888889999999988876644 4567788899999999994 34333    3677788889


Q ss_pred             hhhhcccCcc----c----chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHH
Q 018843          145 AVGYVATDSG----F----TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV  216 (350)
Q Consensus       145 ~~l~~~~~~~----~----~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (350)
                      +.+.+.+|.+    .    .-.|+...+.|.+.|..|.++.+..    +.+.++...-|+.-..+..........|. ..
T Consensus       131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~-~~  205 (288)
T COG4975         131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEK-RF  205 (288)
T ss_pred             heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhccccc-ch
Confidence            9988776531    1    1268888889999999999988755    33444443334333222222222222221 11


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhH----HH
Q 018843          217 FAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGL----IC  292 (350)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G  292 (350)
                      .+            .. +.=...|+.-...+...+.+-++.+-.+.=..+-+.-+.+++-|.++++|+-|..++    +|
T Consensus       206 ~K------------~t-~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iG  272 (288)
T COG4975         206 NK------------YT-WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIG  272 (288)
T ss_pred             HH------------HH-HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhh
Confidence            11            11 222233445455555555556666655555556677788889999999999988754    58


Q ss_pred             HHHHhhhhhhhcc
Q 018843          293 LLVTIAGGVLYQQ  305 (350)
Q Consensus       293 ~~li~~g~~~~~~  305 (350)
                      +++++.|..+...
T Consensus       273 iilivvgai~lg~  285 (288)
T COG4975         273 IILIVVGAILLGI  285 (288)
T ss_pred             HHHHHHHhhhhhe
Confidence            8888888776544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.86  E-value=0.0095  Score=54.58  Aligned_cols=119  Identities=15%  Similarity=0.107  Sum_probs=85.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843          156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA  235 (350)
Q Consensus       156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (350)
                      ...|..+++.++++.+...+++|+-.++.+.+..+.                   ++.  ..++       +.++.+|..
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~~--~~~~-------l~~~~W~~G   56 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GSG--GRSY-------LRRPLWWIG   56 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cch--hhHH-------HhhHHHHHH
Confidence            457999999999999999999998665432211110                   000  0000       113345555


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          236 VALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      ++.. +.+...++   .++...+++..+..+.+.-++..+++-.+++|+++...+.|..+++.|..+....
T Consensus        57 ~~~~-~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   57 LLLM-VLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHH-hcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            5433 34444443   4678899999999999999999999999999999999999999999999876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.84  E-value=0.035  Score=42.59  Aligned_cols=67  Identities=13%  Similarity=0.092  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843           82 PAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV  149 (350)
Q Consensus        82 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~  149 (350)
                      ..-+++....++...+++++|.+++-.+- ...-+.+.+.+++++||+. +..++.++.+.+.|++...
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~-~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL-NRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHhc
Confidence            33444555677888999999999977664 5788999999999999995 9999999999999998753

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.47  E-value=0.061  Score=50.01  Aligned_cols=138  Identities=12%  Similarity=0.176  Sum_probs=94.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHH-HhHHHHHHHHHHH--HHhccHHHHHHHHHHhcCCCCchhHH
Q 018843          157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLY-NNLLSLIISPFFW--FLTGEYGEVFAALVASAGSWFVPDVF  233 (350)
Q Consensus       157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (350)
                      ..|+++.+++++|++.+.+-.|+ .|   .-+||...- ..+++-++.|...  +..++..+..+.        .++..+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k---~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~--------~~~~~~   73 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VK---KWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSS--------FSGSTL   73 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cC---CCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh--------cCHHHH
Confidence            47999999999999999998887 33   234554421 1223334444222  122233332221        156677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHccCCCC---c----hhhHHHHHHHhhhhhhhcc
Q 018843          234 FAVALSCVFGLLISFFGFAARKAISAT-AFTVTGVVNKFLTVVINVLIWDKHA---S----PFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~-~~s~~~~l~~v~~~~ls~~~~~e~~---t----~~~~~G~~li~~g~~~~~~  305 (350)
                      ......|++-...+...+..+|+.+-+ .+.+..-+..+..++++.+++||=.   +    ..-++|.+++++|+.+..+
T Consensus        74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            788888888888888888888888864 5566667888999999999998533   2    2367799999999999887


Q ss_pred             c
Q 018843          306 S  306 (350)
Q Consensus       306 ~  306 (350)
                      .
T Consensus       154 A  154 (345)
T PRK13499        154 A  154 (345)
T ss_pred             h
Confidence            4

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.46  E-value=0.0022  Score=56.24  Aligned_cols=68  Identities=16%  Similarity=0.171  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843          240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV  307 (350)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~  307 (350)
                      |+.|+...+..|++.++.+-.-+.+.....|+++++++|.+++|+.|.+..+|..+.+.|+.+..+..
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            45555555556667888888888888899999999999999999999999999999999999977543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.37  E-value=0.014  Score=43.63  Aligned_cols=54  Identities=15%  Similarity=0.138  Sum_probs=30.9

Q ss_pred             HHHHHHHHH-HHhhccchhHH-HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHH
Q 018843          243 GLLISFFGF-AARKAISATAF-TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVT  296 (350)
Q Consensus       243 ~~~~~~~~~-~~i~~~sa~~~-s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li  296 (350)
                      ....++..+ .++|+.+.... .+..-+..+..++.|.++|||++|+.+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444554444 78899887655 7778899999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.25  E-value=0.12  Score=46.17  Aligned_cols=71  Identities=13%  Similarity=0.211  Sum_probs=54.3

Q ss_pred             hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHH----HHHHHHHhhh
Q 018843           74 FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL----SLVIILGGAV  146 (350)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~----~~~l~~~G~~  146 (350)
                      ++.++. +..|+++.....++..+.+....++.-.+.++.++...+.+.+++||+ .+++++.    ++++.++|.+
T Consensus       193 k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~-Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  193 KKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK-KTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             cchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec-CchhhHHHHHHHHHHHHHhhh
Confidence            344555 445777777777788999999999999999999999999999999998 4777553    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.24  E-value=0.024  Score=50.36  Aligned_cols=130  Identities=12%  Similarity=0.118  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      |++.+++|+++++...+=.|+.-.  + +.   +++|...+..++......  ..+                .+.++...
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~--g-Dg---~~fQw~~~~~i~~~g~~v~~~~~----------------~p~f~p~a   58 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT--G-DG---FFFQWVMCSGIFLVGLVVNLILG----------------FPPFYPWA   58 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC--C-Cc---HHHHHHHHHHHHHHHHHHHHhcC----------------CCcceeHH
Confidence            566778888888888777765432  1 23   444555543333333221  111                11233333


Q ss_pred             HHHHHHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHH-ccCCC---C--chhhHHHHHHHhhhhhhhcccccC
Q 018843          237 ALSCVFGLLISFFGFAARKAISA-TAFTVTGVVNKFLTVVINVL-IWDKH---A--SPFGLICLLVTIAGGVLYQQSVTG  309 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~~~i~~~sa-~~~s~~~~l~~v~~~~ls~~-~~~e~---~--t~~~~~G~~li~~g~~~~~~~~~~  309 (350)
                      .+.|.+-...+.+..-++|..+- .-..+.+..+-+.+...|-+ +||+.   +  .+.+++|++++++|..+|...|.+
T Consensus        59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            34445544455555555666553 33445555566666665543 45532   2  567999999999999999877665


Q ss_pred             C
Q 018843          310 P  310 (350)
Q Consensus       310 ~  310 (350)
                      .
T Consensus       139 ~  139 (254)
T PF07857_consen  139 E  139 (254)
T ss_pred             C
Confidence            4

The region concerned is approximately 280 residues long.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.77  E-value=0.11  Score=45.56  Aligned_cols=55  Identities=24%  Similarity=0.347  Sum_probs=50.3

Q ss_pred             HHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843           92 FTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        92 ~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      .+...++++.|...+.++.++.|.+-.+.++++++|. ++..+|.++...+.+.+=
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhc
Confidence            4588999999999999999999999999999999999 599999999988887663

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.76  E-value=0.77  Score=36.89  Aligned_cols=126  Identities=10%  Similarity=0.027  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCChhhhhHHHHHHHHHHHHHHHhhhhh
Q 018843           20 VGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFL-HHDPFTFDTAKKFLPAAFVFYLAIFTNTNLL   98 (350)
Q Consensus        20 ~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al   98 (350)
                      +...........+|-.+-++...|..-++.-+..+.+.+.++....+. +.+.....++. .+..|++......+.....
T Consensus         7 ~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~v   85 (138)
T PF04657_consen    7 LLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILV   85 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHh
Confidence            333444444455565555455558887777788887777776554433 22222222233 3346777777788888888


Q ss_pred             hccchhHHHHHH-hHHHHHHHHHHHH----HcccCCCchhhHHHHHHHHHhhhh
Q 018843           99 RHANVDTFIVFR-SLTPLLVALADTA----FRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        99 ~~~s~s~~~il~-~~~pi~v~ll~~l----~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      ..+.++..+.+. .-+.+...+++.+    .-|+++ +..+..++.++++|+.+
T Consensus        86 p~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~-~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   86 PRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF-SLRRILGLALMIAGVIL  138 (138)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC-CHHHHHHHHHHHHHHhC
Confidence            888888777664 5666777777775    344564 78899999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.68  E-value=0.11  Score=38.74  Aligned_cols=55  Identities=16%  Similarity=0.155  Sum_probs=32.9

Q ss_pred             HHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHH
Q 018843           86 VFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVII  141 (350)
Q Consensus        86 ~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~  141 (350)
                      ++....++...+++++|.+.+-.+ .....+.+.+.+..+++|++ +..++.++.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~-s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL-SLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHhheeeC
Confidence            556667889999999999998655 56999999999999999996 89999988763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=95.58  E-value=0.31  Score=42.45  Aligned_cols=67  Identities=13%  Similarity=0.074  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843           80 FLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        80 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      .+...++......+..+.++|.+..+..+...+.++++.+++.++++|+ ++..++.+..+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEe
Confidence            3344444555556678889999999999999999999999999999999 599999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.55  E-value=0.03  Score=51.61  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      -..-++.|.+-++.+|....++++++....++++...-+++..++.++.+|++|+...++..+.+.|+++.+....++
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            345556677788888888899999999999999999999999999999999999999999999999999987655443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.36  E-value=1  Score=41.52  Aligned_cols=71  Identities=23%  Similarity=0.328  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843          234 FAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      +-+..-+.+...-|...+.+..+.+|.+.++...+|.+.+.++++++++++++..||...++...|+.+..
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            44444445666666666688999999999999999999999999999999999999999999999999866

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.19  E-value=0.94  Score=36.74  Aligned_cols=136  Identities=10%  Similarity=0.107  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843          158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA  237 (350)
Q Consensus       158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (350)
                      ...+..+.+-.+-....-...++.+..+ ++..-...+...++..+.......+..+... .        .....|+.. 
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~--------~~~~pwW~~-   73 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA-A--------VASAPWWAW-   73 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-h--------ccCCchHHH-
Confidence            4456667777777777777777777433 4555555566665544444433332222211 1        122233333 


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc--cC---CCCchhhHHHHHHHhhhhhhhc
Q 018843          238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI--WD---KHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~--~~---e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      ..|+++..+-+.......+.++.+.............++--.|  +|   .++++..++|+.++++|+++..
T Consensus        74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            3347777777777778889998877766666665555443333  22   6889999999999999955443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.99  E-value=0.17  Score=38.92  Aligned_cols=69  Identities=23%  Similarity=0.224  Sum_probs=53.7

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843           77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      ++.+.|..+ +..+...++..+...+.|.+.-+ ++++-+++++.++++.+|. .+++++.++.+.++|+.+
T Consensus        42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhHHHHHHHHHcCeee
Confidence            445555544 44444557788889999988877 5899999999998887776 478899999999999876

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.83  E-value=0.045  Score=47.66  Aligned_cols=132  Identities=14%  Similarity=0.137  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL  238 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (350)
                      +++.+++=++.|+..-....+.    +-+|.+++.=+++-+++.....+++..+.              .+...+..-..
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------------~T~~~~iv~~i   64 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLGALIFAIIVFLFVSPE--------------LTLTIFIVGFI   64 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHHHHHHHHHHheeecCc--------------cchhhHHHHHH
Confidence            4566677777777665544433    44566555434444433222222221111              14456677777


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHH----HHHHHhhhhhhhccccc
Q 018843          239 SCVFGLLISFFGFAARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLI----CLLVTIAGGVLYQQSVT  308 (350)
Q Consensus       239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~----G~~li~~g~~~~~~~~~  308 (350)
                      +|++-...+...+.+++..+.+..... +-++.+-+.++|++.|||=.+..+.+    ..++++.|..+-.+.++
T Consensus        65 sG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          65 SGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            888888888888888888777655543 45677888899999999988887654    56777888877665554

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.39  E-value=1.5  Score=37.84  Aligned_cols=128  Identities=15%  Similarity=0.098  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCC-----CCChhhhhHHHHHHHHHHHH
Q 018843           18 LVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHD-----PFTFDTAKKFLPAAFVFYLA   90 (350)
Q Consensus        18 ~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~   90 (350)
                      ++...+..+...++..|.-..  +|. -+.-.++.-+.+..++..+..+-.-+.+     .++.+....+++-|++.++.
T Consensus       159 Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgi  237 (309)
T COG5070         159 WMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGI  237 (309)
T ss_pred             EEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhh
Confidence            445567777777777776664  332 3445666667777777666543222211     12233333455566666777


Q ss_pred             HHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843           91 IFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        91 ~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      .++.-|.++-++.+++.++..++-....+.+.+++.++. ++..+.++.++....++
T Consensus       238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~-nf~si~sillGflsg~i  293 (309)
T COG5070         238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPV-NFLSIFSILLGFLSGAI  293 (309)
T ss_pred             hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCch-hHHHHHHHHHHHHHHHH
Confidence            888999999999999999999999999999999999985 77777776666554443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.07  E-value=3.8  Score=37.11  Aligned_cols=135  Identities=14%  Similarity=0.013  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhCcccCC-----CCChhhhhHHHHHHH
Q 018843           12 YYTTSGLVVGYALCSSLLAVINKFAITKFNY-PGLLTALQYLTSALGVWVLGKFGFLHHD-----PFTFDTAKKFLPAAF   85 (350)
Q Consensus        12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~-p~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~   85 (350)
                      .....++...|..+=-..+...+.++.++.. +..+.+.--+...+...........-.+     +..++-++|++..+.
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            3334445555555443444455556654432 3333333223333333322221111111     234567899999999


Q ss_pred             HHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843           86 VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG  147 (350)
Q Consensus        86 ~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l  147 (350)
                      +...+..+-+.-++.-..=+.+++..+.=++...++.+++++++ +..+|.++.+.+.|..+
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~-s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPL-SSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCcc-chhhccCeeeehHHHHH
Confidence            99999777666666544455566677788899999999999997 89999999998888876

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.42  E-value=4.7  Score=37.30  Aligned_cols=140  Identities=12%  Similarity=0.132  Sum_probs=82.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHH-HHhHHHHHHHHHHHH--HhccHHHHHHHHHHhcCCCCchhHH
Q 018843          157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVL-YNNLLSLIISPFFWF--LTGEYGEVFAALVASAGSWFVPDVF  233 (350)
Q Consensus       157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  233 (350)
                      ..|+++..++.++.+.+.+=.||..    .=.||... .+.+++-++.|...-  ..+|+.+....       . +...+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~-------~-~~~~l   73 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA-------T-PASTL   73 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh-------C-ChhHH
Confidence            4799999999999999998887762    23466544 355667666665543  33455555432       1 22233


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccC-------CCCchhhHHHHHHHhhhhhhhc
Q 018843          234 FAVALSCVFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWD-------KHASPFGLICLLVTIAGGVLYQ  304 (350)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~-------e~~t~~~~~G~~li~~g~~~~~  304 (350)
                      ....+.|++--..+. .| ..+|+.+- ...++..-+..++.+++--++-+       ++-....++|.++.++|+.+..
T Consensus        74 ~~~~l~G~lWGIGgl-tfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g  152 (344)
T PF06379_consen   74 FWTFLFGVLWGIGGL-TFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG  152 (344)
T ss_pred             HHHHHHHHHHhcchh-hHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence            333334343222222 22 45666664 34455555555666665555432       2223457889999999999987


Q ss_pred             ccccC
Q 018843          305 QSVTG  309 (350)
Q Consensus       305 ~~~~~  309 (350)
                      +.-..
T Consensus       153 ~AG~~  157 (344)
T PF06379_consen  153 KAGSM  157 (344)
T ss_pred             HHHHh
Confidence            66433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=90.76  E-value=1  Score=41.39  Aligned_cols=132  Identities=14%  Similarity=0.077  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--c--CCchHHHHHHHHHHHHHHHH-HHHHhCcccC------CCCChhhhhHHHHH
Q 018843           15 TSGLVVGYALCSSLLAVINKFAIT--K--FNYPGLLTALQYLTSALGVW-VLGKFGFLHH------DPFTFDTAKKFLPA   83 (350)
Q Consensus        15 ~~~~~~~~~~~s~~~~~~nK~~~~--~--~~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~------~~~~~~~~~~~~~~   83 (350)
                      ....+....+....-.+..|.++.  +  .+ +..+..++.-++...+. +.........      .+.+.+ ...+...
T Consensus       164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  241 (316)
T KOG1441|consen  164 GFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHH
Confidence            334444444445566667777774  2  33 66677777777777776 5443221111      122222 2233344


Q ss_pred             HHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843           84 AFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV  149 (350)
Q Consensus        84 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~  149 (350)
                      +++........+..+..+++-++++.....=+++...+++++++++ +....+|..+.++|+.+-.
T Consensus       242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pv-t~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPV-TFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCC-chhhHHHHHHHHHHHHHHH
Confidence            4444444556777788899999999988888889999999999986 8999999999999998854

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.76  E-value=7.8  Score=31.47  Aligned_cols=130  Identities=14%  Similarity=0.064  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC--hh-hhhHHHHHHHHHHHHHHH
Q 018843           17 GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT--FD-TAKKFLPAAFVFYLAIFT   93 (350)
Q Consensus        17 ~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~   93 (350)
                      +..+....+....+-+|-.+-+.-+.|..-.+.-+..+.+++..+... +.++++..  ++ .|..|+. |++.......
T Consensus         8 l~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~~~G-G~lGa~~vt~   85 (150)
T COG3238           8 LFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWAWIG-GLLGAIFVTS   85 (150)
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHHHHc-cchhhhhhhh
Confidence            445555566666677777776666678888888888877777766555 33333323  33 3333333 4444444444


Q ss_pred             hhhhhhccchhHHHH-HHhHHHHHHHHHHHHHcc----cCCCchhhHHHHHHHHHhhhhhc
Q 018843           94 NTNLLRHANVDTFIV-FRSLTPLLVALADTAFRR----QPCPSRLTFLSLVIILGGAVGYV  149 (350)
Q Consensus        94 ~~~al~~~s~s~~~i-l~~~~pi~v~ll~~l~~~----e~~~~~~~~~~~~l~~~G~~l~~  149 (350)
                      +......+.+++.+. +-..+-+.-++++.+=..    ++ ++..++.+++++++|+.+..
T Consensus        86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhc
Confidence            555555555555444 345555666665554333    34 58889999999999965554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.18  E-value=0.61  Score=40.48  Aligned_cols=67  Identities=15%  Similarity=0.136  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          244 LLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       244 ~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      .....+...+++..+=-+.-+--.-||+...++|+.+.+...+|.......+|++|+.++.+.+.|.
T Consensus        96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            3334445578888887777777788999999999999999999999999999999999998876554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.12  E-value=0.22  Score=45.26  Aligned_cols=123  Identities=13%  Similarity=0.216  Sum_probs=84.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843          156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA  235 (350)
Q Consensus       156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (350)
                      +..|..+.+.+.+..+...++.|+-.++.+....                   -.+|.+..  +        .....|+.
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~-------------------ra~~gg~~--y--------l~~~~Ww~   69 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGL-------------------RAGEGGYG--Y--------LKEPLWWA   69 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHHHhhhcc-------------------cccCCCcc--h--------hhhHHHHH
Confidence            4568888888888888888888876553221110                   00111000  0        01123444


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          236 VALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      -.+.-..|=..+|+.   ....+++..+..+.+.-+.+.+++..+++|.+++...+|+++.++|..+......++
T Consensus        70 G~ltm~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            444446666666665   467788999999999999999999999999999999999999999999876554443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=88.93  E-value=7.7  Score=35.44  Aligned_cols=135  Identities=19%  Similarity=0.186  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-cchhHHHHhHHHHHHHHHHHHHh-ccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843          159 AYSWAFAYLVTITTEMVYIKHMVTNLGLN-TWGFVLYNNLLSLIISPFFWFLT-GEYGEVFAALVASAGSWFVPDVFFAV  236 (350)
Q Consensus       159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (350)
                      ...-++..+++..+..+..|....+.+.+ ...++.+|.+.+++...+.-... -+.++.         +|.....|+-+
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---------~~~~~kk~~P~   83 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---------DLRTAKKWFPV   83 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---------ChHHHHHHccH
Confidence            34555666666667777778777765554 33445578887654333332210 011111         12122223211


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843          237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ  305 (350)
Q Consensus       237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~  305 (350)
                         .++-.+.-++....+|+.+-....+.....++...+....+++..++...+......++|...+..
T Consensus        84 ---~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   84 ---SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             ---HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence               112222334445678999999999999999999999999999999999999999999999887653

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=88.22  E-value=1.3  Score=34.14  Aligned_cols=51  Identities=12%  Similarity=0.049  Sum_probs=41.3

Q ss_pred             HHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhh
Q 018843          252 AARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVL  302 (350)
Q Consensus       252 ~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~  302 (350)
                      ..+++.+-+..... +.+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34666666555555 5788899999999999999999999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=87.19  E-value=0.68  Score=39.10  Aligned_cols=68  Identities=15%  Similarity=0.182  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843          243 GLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP  310 (350)
Q Consensus       243 ~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~  310 (350)
                      -+..+|....++++.+|+.++-...-+..+.-+++++.++++.....++..++.+.|+.+..+.....
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            34567766789999999999999999999999999999999999999999999999999888765543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=82.05  E-value=28  Score=31.40  Aligned_cols=135  Identities=14%  Similarity=0.168  Sum_probs=86.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHH-hCcc-cCCCCC------hhhhhHHH-
Q 018843           12 YYTTSGLVVGYALCSSLLAVINKFAIT-KFNYPGLLTALQYLTSALGVWVLGK-FGFL-HHDPFT------FDTAKKFL-   81 (350)
Q Consensus        12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~-~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~-~~~~~~------~~~~~~~~-   81 (350)
                      -..-.+.++...+..+.++.=.|++.. +.+ |.....++-+.+.+++..+.. .... ..++++      ++++.+.+ 
T Consensus       175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA  253 (372)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhhhccCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence            444556677777878888877776554 333 888899988888555544322 1111 111111      22333321 


Q ss_pred             --------HHHHH-HHHHHHH-hhhh---hhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhh
Q 018843           82 --------PAAFV-FYLAIFT-NTNL---LRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGY  148 (350)
Q Consensus        82 --------~~~~~-~~~~~~~-~~~a---l~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~  148 (350)
                              ..++. ....+.+ ++.+   -++.|+++-.++.++...++=+++.....|++ ...+..+.++...|+.+-
T Consensus       254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f-~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYF-HLLQILGFLILIMGIILY  332 (372)
T ss_pred             HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence                    11111 2223333 3333   45788899999999998888899999999996 899999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	350
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 9e-04
 Identities = 49/303 (16%), Positives = 78/303 (25%), Gaps = 83/303 (27%)

Query: 1   MSSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYP------GLLTALQYLTS 54
           MS I+     +    S +   Y      L   N+    K+N         L  AL  L  
Sbjct: 95  MSPIK----TEQRQPSMMTRMYIEQRDRLYNDNQ-VFAKYNVSRLQPYLKLRQALLELRP 149

Query: 55  ALGVWVLGKFGF----LHHDPFTFDTAKKFLPAAFVFYL---------AIFTNTNLLRH- 100
           A  V + G  G     +  D       +  +    +F+L          +      L + 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK-IFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 101 ------ANVD-----------------TFIVFRSLTPLLVALAD-------TAFRRQPCP 130
                 +  D                   +  +     L+ L +        AF    C 
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-CK 267

Query: 131 SRLT--FLSLVIILGGAVGYVAT----DSGFTLTAYSWAFAYLVTITT-----EMVYIKH 179
             LT  F  +   L  A     +        T           +         E++    
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327

Query: 180 MVTNL-------GLNTWGFVLYNNL--LSLIISPFFWFLT-GEYGEVFAALVASAGSWFV 229
              ++       GL TW    + N   L+ II      L   EY ++F  L       F 
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-----FP 382

Query: 230 PDV 232
           P  
Sbjct: 383 PSA 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.92
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.24
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.12
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.99

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.92  E-value=1.4e-09  Score=86.10  Aligned_cols=69  Identities=12%  Similarity=0.101  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHH-HHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843          239 SCVFGLLISFFGF-AARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV  307 (350)
Q Consensus       239 ~~~~~~~~~~~~~-~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~  307 (350)
                      .++++++.+|..+ +++|+.++.....+ ..+.|++++++|+++|||++|+.+++|+.++++|+++.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3455555555555 89999999988777 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.24  E-value=4.4e-06  Score=63.56  Aligned_cols=67  Identities=12%  Similarity=0.107  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHH-HHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843          240 CVFGLLISFFGF-AARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS  306 (350)
Q Consensus       240 ~~~~~~~~~~~~-~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~  306 (350)
                      ++.....++..+ .++|+.+...+... ..+.|+.++++|++++||++|+.+++|+.+++.|++..+..
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344455555444 88999999998777 89999999999999999999999999999999999988654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.12  E-value=3e-05  Score=58.94  Aligned_cols=68  Identities=10%  Similarity=0.119  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC
Q 018843           84 AFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD  152 (350)
Q Consensus        84 ~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~  152 (350)
                      .+++....++...++++.|.+.+..+ ..+.|+++.+++++++||++ +..++.++.+.++|+++....+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~-s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL-DLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhcCC
Confidence            33455557778889999999999888 89999999999999999995 9999999999999999886544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.99  E-value=2.1e-05  Score=62.04  Aligned_cols=69  Identities=10%  Similarity=0.110  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843           82 PAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT  151 (350)
Q Consensus        82 ~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~  151 (350)
                      ...+++....++.+.++++.|++.+..+ ..+.|++++++++++++|++ +..++++++++++|+++....
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~l-s~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL-DLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence            3344455567789999999999988888 89999999999999999995 899999999999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00