Citrus Sinensis ID: 018859

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQKP
Secondary Structure (PSIPRED)
ccccccccEEEEcccccccHHHHHHccccEEEccccccccccccccccEEEEccccccccccccccccEEEEcccccccHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccccccccccccccEEEcccccHHHcccEEEEEccccccHHHHHHHHHHHcccccccccEEEccccccccccccccccEEEccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccEEEEEEcccccccHHHHHHcccccccccEEEEcccccccEEEEcccccccccccccccccEEEEEcccccccHHHHHHHHHcccHHHHHHEccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccccccccEEEEcccccEEEEccEEEEEcccEccHHHHHHHHHHHHHHHHccccEEEEccccccccccccccEEEEEccccccccHcHccHHHHHHHcHHccccccHHHHHHHHHHHHHHHHccHHcccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccHHcccc
Coil and Loop (DISEMBL)
masiwtlqfhslyfphrvSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVrdsassnedqnlesgkvavaadtktkdpVAKFQETlislppvafVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRsrynrpgsvedlvrrgqlrsdrrgisrplkyedpfnnplvkvgksnstmemcgkvyrlapitltkeQQTIHQKRRsrayqwkrptiflkegdlippdvdpdtvrwipanhpfattandidedlaqnnvyqkqgvpfRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERafklnpkseepldqnpfvnqsgdlrpprpdqapngydsnssseemqkp
Flexible Loop (DISEMBL)
masiwtlqfhslyfpHRVSSTVAKLRTEFTlsqgrlslnrwstnrKFQLKAVrdsassnedqnlesgkvavaadtktkdPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVrrsrynrpgsvedlvrrgqlrsdrrgisrplkyedpfnnplvkvgksnstmeMCGKVYRLapitltkeqqtihqkrrsrayqwkrptiflkegdlippdVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKlnpkseepldqnpfvnqsgdlrppRPDQapngydsnssseemqkp
Low Complexity Region (SEG)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQKP
Disordered region (IsUnstruct)
***IWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTN************************************VAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYN***********************************V*******TMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRA*********************************************************************************
Disordered Region (DISOPRED)
**SIWTLQFHSLYFPHRVSS**********LSQGRLSLNRWSTNRKFQ**********************************KFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRA***********************************YEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITL****************QWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAE********************************************************************************
Disordered Region (DISEMBL)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLK***************SGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTK*************YQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPD******************
Disordered Region (DISPRO)
*ASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSA*********SGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRS******SV********LRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN**KLNKL************************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
255539300	358	conserved hypothetical protein [Ricinus	0.908	0.885	0.656	1e-119
449455623	358	PREDICTED: uncharacterized protein LOC10	0.979	0.955	0.573	1e-110
225457624	335	PREDICTED: uncharacterized protein LOC10	0.931	0.970	0.607	1e-109
224083354	269	predicted protein [Populus trichocarpa]	0.770	1.0	0.758	1e-108
15218043	349	multiple chloroplast division site 1 [Ar	0.942	0.942	0.574	1e-103
8886939	364	F2D10.35 [Arabidopsis thaliana]	0.951	0.912	0.562	1e-102
224065649	252	predicted protein [Populus trichocarpa]	0.722	1.0	0.761	1e-102
297845062	351	hypothetical protein ARALYDRAFT_472319 [	0.928	0.923	0.576	1e-102
356508508	361	PREDICTED: uncharacterized protein LOC10	0.905	0.875	0.527	1e-90
363807146	363	uncharacterized protein LOC100812404 [Gl	0.891	0.856	0.508	1e-89

>gi|255539300|ref|XP_002510715.1| conserved hypothetical protein [Ricinus communis] gi|223551416|gb|EEF52902.1| conserved hypothetical protein [Ricinus communis]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/332 (65%), Positives = 261/332 (78%), Gaps = 15/332 (4%)

Query: 17  RVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNEDQNLESGKVAVAADTK 76
           R+S    ++R EF LS  ++ LNR  TN    L+A + S +  ED+            T 
Sbjct: 41  RLSPKFMEIRREFVLSHYQIKLNRSFTN---PLRASKGSVNPTEDEQ-----------TP 86

Query: 77  TKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRP-G 135
           T   + KFQ  + +LPPV FV +R + S+  I L ++TAFLVI +R ++VR++RY RP G
Sbjct: 87  TVSSLDKFQAIISTLPPVVFVRRRQSGSNIIIWLCVATAFLVIALRVYVVRKTRYRRPPG 146

Query: 136 SVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQ 195
           SV DLVRRGQLRSDRRGIS PLKY+DPFNNPLVKVGKSNST+EMCGKVYRLAP+TLTKEQ
Sbjct: 147 SVADLVRRGQLRSDRRGISMPLKYDDPFNNPLVKVGKSNSTVEMCGKVYRLAPVTLTKEQ 206

Query: 196 QTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNN 255
           Q IHQKRRSRAYQWKRPTIFLKEGD IPPDVDPDTVRWIPANHPFATTA+DIDEDLAQ N
Sbjct: 207 QAIHQKRRSRAYQWKRPTIFLKEGDSIPPDVDPDTVRWIPANHPFATTASDIDEDLAQTN 266

Query: 256 VYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQ 315
           VYQK GVPFRI+AEHEALQ+KLEALQ +QKLNKLVID+SNAKDFER FK NPKS E ++Q
Sbjct: 267 VYQKHGVPFRIQAEHEALQRKLEALQQDQKLNKLVIDTSNAKDFERPFKSNPKSNELVEQ 326

Query: 316 NPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQ 347
           +PF +Q+G+ +P + +  PN ++S+ SSEE+Q
Sbjct: 327 SPFNDQAGEPKPSKSNSIPNSFNSSLSSEELQ 358

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455623|ref|XP_004145552.1| PREDICTED: uncharacterized protein LOC101205591 [Cucumis sativus] gi|449485086|ref|XP_004157065.1| PREDICTED: uncharacterized protein LOC101232095 [Cucumis sativus]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/363 (57%), Positives = 259/363 (71%), Gaps = 21/363 (5%)

Query: 1   MASIWTLQFHSLYFPHRV-------SSTVAKLRTEF---TLSQGRLSLN--RWSTNRKFQ 48
           MA  WTLQ HSL F   V        S +++L        +  G L+ N  R      F 
Sbjct: 1   MAPNWTLQLHSLSFQPYVWVRKPPALSAISQLGIGSKWDGIRYGHLNCNSDRSRIGGNFV 60

Query: 49  LKAVRDSASSNEDQNLESGKVAVAADTKT---KDPVAKFQETLISLPPVAFVMKRHTRSS 105
           +K+   SAS++   N+E  ++ + + T +   +D + K QE +IS PP  F+M + TR+ 
Sbjct: 61  VKSGEGSASTDSGGNVEGDEIVLKSGTGSVASEDYIGKMQEMIISSPPGVFLMNKCTRNG 120

Query: 106 FAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNN 165
            AIG  + TA L IV R +++R+SR +  GSV DLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMRKSRNSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 166 PLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPD 225
           PLVKV KSNS++EMCGKVYRLAP+TLTKE+Q IHQKRRSRAYQWKRPT+FLKEGD IPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 226 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQK 285
           VDPDT+RWIPANHPFATTA+DIDEDLAQNNVYQK GVPFRI+AEHEALQ+KLEALQ++QK
Sbjct: 241 VDPDTIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQSDQK 300

Query: 286 LNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEE 345
           LN L ID  + K+FER FK   KS+E ++Q+   +Q+G+ +P      PN +   SSS+E
Sbjct: 301 LNNLFIDPGSVKEFERPFKSKSKSDEQVEQSSSDHQTGESKP------PNSFGGQSSSDE 354

Query: 346 MQK 348
            QK
Sbjct: 355 AQK 357

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457624|ref|XP_002274365.1| PREDICTED: uncharacterized protein LOC100261560 [Vitis vinifera] gi|297745587|emb|CBI40752.3| unnamed protein product [Vitis vinifera]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/359 (60%), Positives = 256/359 (71%), Gaps = 34/359 (9%)

Query: 1   MASIWTLQFHSLY-------FPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVR 53
           MA +W  QFHS+        + H +SS + + R E  LS  R +  +  T R F  +A+ 
Sbjct: 1   MALVWNPQFHSISSQPSICGWKHGISSNILEHRRELGLSYSRYNWVQQRTARSFLFRALS 60

Query: 54  DSASSNEDQNLESGKVAVAADTKT---KDPVAKFQETLISLPPVAFVMKRHTRSSFAIGL 110
            SA+S+ED+        V  +T+    K+ + K QET+ S PPV FVMK+    +FAIGL
Sbjct: 61  KSANSDEDK-------VVKTETEINGWKNSIGKLQETIKSFPPVVFVMKKDVGINFAIGL 113

Query: 111 SLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKV 170
            ++T  LV+ VR ++ R+   +RPGSV DLVRRGQLRSDRRGIS PLKYEDPFNNPLVKV
Sbjct: 114 CVATTILVVAVRVYVARKVSSSRPGSVADLVRRGQLRSDRRGISSPLKYEDPFNNPLVKV 173

Query: 171 GKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDT 230
           GKSNST+EMCGKVYRLAP+TLTKEQQ IHQKRRSRAYQWKRPT+FLKEGD IP DVDPDT
Sbjct: 174 GKSNSTVEMCGKVYRLAPVTLTKEQQAIHQKRRSRAYQWKRPTMFLKEGDSIPSDVDPDT 233

Query: 231 VRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLV 290
           VRWIPANHPFATTA++IDE LAQNNVYQK GVPFRI+AEHEALQ+KLEALQ+EQKLNKLV
Sbjct: 234 VRWIPANHPFATTASEIDEGLAQNNVYQKHGVPFRIQAEHEALQRKLEALQSEQKLNKLV 293

Query: 291 IDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQKP 349
           ID +NAKDFER FK +  S E   Q P                 N   S+SS EEMQKP
Sbjct: 294 IDPTNAKDFERPFK-HLTSHEQAGQGP----------------SNRIGSDSSPEEMQKP 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083354|ref|XP_002306994.1| predicted protein [Populus trichocarpa] gi|222856443|gb|EEE93990.1| predicted protein [Populus trichocarpa]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/269 (75%), Positives = 237/269 (88%)

Query: 81  VAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDL 140
           ++KFQ  + +LPP  FVMKR   S+F I L ++TAFLV+ VR ++VR+SR +RPGSV DL
Sbjct: 1   ISKFQGMITTLPPFVFVMKRGAGSNFVIWLCIATAFLVVSVRVYMVRKSRPSRPGSVADL 60

Query: 141 VRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQ 200
           VRRGQLRSDRRGIS PLKYEDPFNNPLVKVGKSNST+E+ GKVY LAP+TLT+EQQ IHQ
Sbjct: 61  VRRGQLRSDRRGISSPLKYEDPFNNPLVKVGKSNSTIEIFGKVYHLAPVTLTEEQQAIHQ 120

Query: 201 KRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQ 260
           +RRSRAYQWKRPTIFLKEGD +PPDVDPDTVRWIP NHPFATTA+DIDEDLAQNNVYQK 
Sbjct: 121 RRRSRAYQWKRPTIFLKEGDPVPPDVDPDTVRWIPTNHPFATTASDIDEDLAQNNVYQKH 180

Query: 261 GVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVN 320
           GVPFRI+AEHEALQ+KLEALQNEQKLNKLVID+ NAK+FER F+ NPKS E ++QNPF +
Sbjct: 181 GVPFRIKAEHEALQRKLEALQNEQKLNKLVIDTGNAKEFERPFRFNPKSNELVEQNPFKS 240

Query: 321 QSGDLRPPRPDQAPNGYDSNSSSEEMQKP 349
           QSGD +P + D+APN ++S+SSSEEMQKP
Sbjct: 241 QSGDSKPSQSDRAPNPFNSSSSSEEMQKP 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218043|ref|NP_173507.1| multiple chloroplast division site 1 [Arabidopsis thaliana] gi|26452945|dbj|BAC43549.1| unknown protein [Arabidopsis thaliana] gi|29824121|gb|AAP04021.1| unknown protein [Arabidopsis thaliana] gi|332191908|gb|AEE30029.1| multiple chloroplast division site 1 [Arabidopsis thaliana]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/367 (57%), Positives = 264/367 (71%), Gaps = 38/367 (10%)

Query: 1   MASIWTLQFHSLYFPHRVSSTV--AKLRTEFTLSQGR---LSLN--RWSTNRKFQLKAVR 53
           MASI +LQFHSL     + S++  AKL+   +L   R   ++LN  ++ T   F  KA+ 
Sbjct: 1   MASIDSLQFHSLC---NLQSSIGRAKLQNPSSLVIFRRRPVNLNWVQFETKGSFVCKAIG 57

Query: 54  DSASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLPPVAFVMKRHTRS 104
           DS++ +ED QN +S    V V A T++  P      +++F+  + +LPPV F+MK+ + +
Sbjct: 58  DSSTPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVN 117

Query: 105 SFAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDP 162
           S  IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDP
Sbjct: 118 SIWIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDP 177

Query: 163 FNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLI 222
           FNNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD I
Sbjct: 178 FNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSI 237

Query: 223 PPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN 282
           PPDVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQN
Sbjct: 238 PPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN 297

Query: 283 EQKLNKLVIDSSNAKDFERAFKLNPKSE-EPLDQNPFVNQSGDLRPPRPDQAPNGYDSNS 341
           E+KLN L IDS NA+DF+R +K + K E E + +N   N +G                NS
Sbjct: 298 EEKLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTG----------------NS 341

Query: 342 SSEEMQK 348
           SSEE  K
Sbjct: 342 SSEETHK 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8886939|gb|AAF80625.1|AC069251_18 F2D10.35 [Arabidopsis thaliana]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/379 (56%), Positives = 263/379 (69%), Gaps = 47/379 (12%)

Query: 1   MASIWTLQFHSLYF------PHRVSSTV--------AKLRTEFTLSQGR---LSLN--RW 41
           MASI +LQFHSL        P   SS          AKL+   +L   R   ++LN  ++
Sbjct: 1   MASIDSLQFHSLCNLQVKIEPISSSSLTLIPSSIGRAKLQNPSSLVIFRRRPVNLNWVQF 60

Query: 42  STNRKFQLKAVRDSASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLP 92
            T   F  KA+ DS++ +ED QN +S    V V A T++  P      +++F+  + +LP
Sbjct: 61  ETKGSFVCKAIGDSSTPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLP 120

Query: 93  PVAFVMKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DR 150
           PV F+MK+ + +S  IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DR
Sbjct: 121 PVVFLMKKCSVNSIWIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDR 180

Query: 151 RGISRPLKYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWK 210
           RGIS+ L YEDPFNNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWK
Sbjct: 181 RGISKSLNYEDPFNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWK 240

Query: 211 RPTIFLKEGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEH 270
           RPTIFLKEGD IPPDVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEH
Sbjct: 241 RPTIFLKEGDSIPPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEH 300

Query: 271 EALQKKLEALQNEQKLNKLVIDSSNAKDFERAFKLNPKSE-EPLDQNPFVNQSGDLRPPR 329
           EA+QKKLEALQNE+KLN L IDS NA+DF+R +K + K E E + +N   N +G      
Sbjct: 301 EAMQKKLEALQNEEKLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTG------ 354

Query: 330 PDQAPNGYDSNSSSEEMQK 348
                     NSSSEE  K
Sbjct: 355 ----------NSSSEETHK 363

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065649|ref|XP_002301902.1| predicted protein [Populus trichocarpa] gi|222843628|gb|EEE81175.1| predicted protein [Populus trichocarpa]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/252 (76%), Positives = 224/252 (88%)

Query: 98  MKRHTRSSFAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPL 157
           M+R + S+F I L ++TAFLV+ VR ++VR+SR +RPGSV DLVRRGQLRSDRRGIS PL
Sbjct: 1   MRRASGSNFVIWLCVATAFLVVAVRVYVVRKSRQSRPGSVADLVRRGQLRSDRRGISSPL 60

Query: 158 KYEDPFNNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLK 217
           KYEDPFNNPLVKV KSNST+EMCGKVYRLAP+TLTK+QQ IHQ+RRSRAYQWKRPTIFLK
Sbjct: 61  KYEDPFNNPLVKVSKSNSTVEMCGKVYRLAPVTLTKDQQAIHQRRRSRAYQWKRPTIFLK 120

Query: 218 EGDLIPPDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKL 277
           EGD IPP+VDPDTVRWIPANHPFATTA+DIDEDLAQNNVYQK GVPFRI+AEHEALQ+KL
Sbjct: 121 EGDSIPPNVDPDTVRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKL 180

Query: 278 EALQNEQKLNKLVIDSSNAKDFERAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGY 337
           E LQNEQKLNKLVID+ NAK+FER+FK NPKS E ++++ F +QSGD +P + D++ N  
Sbjct: 181 ETLQNEQKLNKLVIDTGNAKEFERSFKSNPKSNELVERSSFNSQSGDSKPLKSDRSLNSL 240

Query: 338 DSNSSSEEMQKP 349
           +S+SS EEMQKP
Sbjct: 241 NSSSSPEEMQKP 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845062|ref|XP_002890412.1| hypothetical protein ARALYDRAFT_472319 [Arabidopsis lyrata subsp. lyrata] gi|297336254|gb|EFH66671.1| hypothetical protein ARALYDRAFT_472319 [Arabidopsis lyrata subsp. lyrata]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/342 (57%), Positives = 254/342 (74%), Gaps = 18/342 (5%)

Query: 1   MASIWTLQFHSLY-FPHRVSSTVAKLRTEFTLSQGR-LSLN--RWSTNRKFQLKAVRDSA 56
           MASI +LQFHSL      +  T  ++ +   + + R ++LN  ++ T R+F  KA+ +S+
Sbjct: 1   MASIDSLQFHSLCNLQSSIGRTKLQIPSSLVIFRRRPVNLNWVQFETKRRFACKAIDNSS 60

Query: 57  SSNED-QNLESGK--VAVAADTKTKD--------PVAKFQETLISLPPVAFVMKRHTRSS 105
           + +E+ QN ++    V V A T   D         V++F+  + + PP+ FVMK+ + +S
Sbjct: 61  TPDEEIQNTQNDNNVVVVTAATAQSDIIPHDSEYSVSRFRSMITTFPPLVFVMKKCSGNS 120

Query: 106 FAIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDPF 163
             IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDPF
Sbjct: 121 IWIGICITATVLVAAIRAYVVRKSRDNQRAGSVTDLVRRGQLRSGDRRGISKSLNYEDPF 180

Query: 164 NNPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIP 223
           NNP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD IP
Sbjct: 181 NNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIP 240

Query: 224 PDVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNE 283
           PDVDP+TVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQNE
Sbjct: 241 PDVDPETVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQNE 300

Query: 284 QKLNKLVIDSSNAKDFERAFKLNPKSE-EPLDQNPFVNQSGD 324
           +KLN L IDS NA+DF+R +K + K E E + +N   N +G+
Sbjct: 301 EKLNNLGIDSQNARDFQRPYKFSAKLEGENIQKNSQDNHTGN 342

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508508|ref|XP_003522998.1| PREDICTED: uncharacterized protein LOC100793031 [Glycine max]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/387 (52%), Positives = 245/387 (63%), Gaps = 71/387 (18%)

Query: 1   MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSAS-SN 59
           MAS+WTL F SL            LR    +S+   S             A R+  S  N
Sbjct: 1   MASVWTLHFRSL-----------SLRPCLYISRSNSST------------ATRNCISIRN 37

Query: 60  EDQNLESGKVAVAADTKTKDPVAKFQETLI---SLPPVAFVMKRHTRSSFAIGLSLSTAF 116
              N  SG   +  D+   + + KF   L+   ++PP  F++ R+   +F I + ++   
Sbjct: 38  GISNWRSGTQQLKHDSI--NSITKFHHQLVNSVAIPP--FLLNRNGGGNFPIWVCVAVVV 93

Query: 117 LVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNST 176
           LV+ VR  +V R +  RPGSV DLVRRGQLRSDRRGISRPLKYEDPFNNP VKVGKS+ST
Sbjct: 94  LVVAVRVRVVSRKK-ERPGSVADLVRRGQLRSDRRGISRPLKYEDPFNNPFVKVGKSDST 152

Query: 177 MEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPA 236
           +EMCGKVYRLAP+TLT+EQQ  HQKRR RAYQWKRPTIFL+EGDL+PPDVDPDTVRWIPA
Sbjct: 153 VEMCGKVYRLAPVTLTQEQQATHQKRRLRAYQWKRPTIFLREGDLVPPDVDPDTVRWIPA 212

Query: 237 NHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNA 296
           NHPFATTA D+DEDLAQNNVYQK GVPFRI+AEHEALQKKLEALQN+QKLNKLVID  NA
Sbjct: 213 NHPFATTATDLDEDLAQNNVYQKHGVPFRIQAEHEALQKKLEALQNDQKLNKLVIDPINA 272

Query: 297 KDFERAF----KLNPKSE----------------EPLD----QNPF-------------- 318
           K+FER F    +LN +++                +P+D    + PF              
Sbjct: 273 KEFERPFNSHARLNDQADKSSVNNQEQKHNKLVIDPIDAKEIERPFNSDTRLNDQAEKSS 332

Query: 319 -VNQSGDLRPPRPDQAPNGYDSNSSSE 344
             NQ+     PR D  PN +DS SS +
Sbjct: 333 VNNQASASDSPRVDSGPNHFDSTSSED 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807146|ref|NP_001242343.1| uncharacterized protein LOC100812404 [Glycine max] gi|255635109|gb|ACU17912.1| unknown [Glycine max]

 Score =  336 bits (861), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/393 (50%), Positives = 239/393 (60%), Gaps = 82/393 (20%)

Query: 1   MASIWTLQFHSL------YFPHRVSSTVAKLRTEFTLSQGRLSL-NRWSTNRKFQLKAVR 53
           MAS+WTL F SL      Y     SS   +          R+S+ NR S  R    +   
Sbjct: 1   MASVWTLHFRSLSLRPCLYISSNCSSAATR---------NRISIRNRISNWRSCAQQLKH 51

Query: 54  DSASSNEDQNLESGKVAVAADTKTKDPVAKFQETLI---SLPPVAFVMKRHTRSSFAIGL 110
           DS +S                      + KF   L+   ++PP  F++ ++  S+F I +
Sbjct: 52  DSINS----------------------ITKFHHQLVHSVTIPP--FLLNQNGGSNFPIWV 87

Query: 111 SLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKV 170
            ++   LV+ VR  +V   +  RPGSV DLVRRGQLRSDRRGISRPLKYEDPFNNP VKV
Sbjct: 88  CVAVVVLVVAVRMRVVVSRKKERPGSVADLVRRGQLRSDRRGISRPLKYEDPFNNPFVKV 147

Query: 171 GKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDT 230
           GKS+ST+EMCGKVYRLAPITLT+EQQ  HQKRR RAYQWKRPTIFL+EGD +PPDVDPDT
Sbjct: 148 GKSDSTVEMCGKVYRLAPITLTQEQQATHQKRRLRAYQWKRPTIFLREGDSVPPDVDPDT 207

Query: 231 VRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLV 290
           VRWIPANHPFATTA D+DEDLAQNNVYQK G PFRI+AEHEALQKKLEALQN+QKL+KLV
Sbjct: 208 VRWIPANHPFATTATDLDEDLAQNNVYQKHGAPFRIQAEHEALQKKLEALQNDQKLDKLV 267

Query: 291 IDSSNAKDFERAF--------------------KLNPKSEEPLDQNPFV----------- 319
           ID  NAK+FER F                    KLN +  +P++   F            
Sbjct: 268 IDPINAKEFERPFNSHARLNDQADKSSANNQEQKLNKQVIDPINAKEFERPFNSHTRLND 327

Query: 320 --------NQSGDLRPPRPDQAPNGYDSNSSSE 344
                   NQ+ D   PR D  PN ++S SS +
Sbjct: 328 QAEKSSAHNQASDSDSPRIDSGPNHFESTSSED 360

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2030512	349	MCD1 "AT1G20830" [Arabidopsis	0.925	0.925	0.598	5.9e-96

TAIR|locus:2030512 MCD1 "AT1G20830" [Arabidopsis thaliana (taxid:3702)]

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 204/341 (59%), Positives = 256/341 (75%)

Query:     1 MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGR---LSLN--RWSTNRKFQLKAVRDS 55
             MASI +LQFHSL    + S   AKL+   +L   R   ++LN  ++ T   F  KA+ DS
Sbjct:     1 MASIDSLQFHSLC-NLQSSIGRAKLQNPSSLVIFRRRPVNLNWVQFETKGSFVCKAIGDS 59

Query:    56 ASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLPPVAFVMKRHTRSSF 106
             ++ +ED QN +S    V V A T++  P      +++F+  + +LPPV F+MK+ + +S 
Sbjct:    60 STPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVNSI 119

Query:   107 AIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDPFN 164
              IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDPFN
Sbjct:   120 WIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDPFN 179

Query:   165 NPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPP 224
             NP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD IPP
Sbjct:   180 NPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIPP 239

Query:   225 DVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQ 284
             DVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQNE+
Sbjct:   240 DVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQNEE 299

Query:   285 KLNKLVIDSSNAKDFERAFKLNPKSE-EPLDQNPFVNQSGD 324
             KLN L IDS NA+DF+R +K + K E E + +N   N +G+
Sbjct:   300 KLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTGN 340


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      349       349   0.00099  116 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  222 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.17u 0.15s 32.32t   Elapsed:  00:00:01
  Total cpu time:  32.17u 0.15s 32.32t   Elapsed:  00:00:01
  Start:  Fri May 10 07:39:14 2013   End:  Fri May 10 07:39:15 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002918001 SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (335 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	80.42

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=80.42  E-value=1.7  Score=33.73  Aligned_cols=8  Identities=63%  Similarity=1.215  Sum_probs=3.9

Q ss_pred             CCCccCCC
Q 018859          155 RPLKYEDP  162 (349)
Q Consensus       155 kplkYeDP  162 (349)
                      -|-+||||
T Consensus        55 DP~TYEDP   62 (75)
T PF14575_consen   55 DPHTYEDP   62 (75)
T ss_dssp             -GGGSSSH
T ss_pred             CcccccCH
Confidence            45555555

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 1e-10
 Identities = 49/331 (14%), Positives = 91/331 (27%), Gaps = 103/331 (31%)

Query: 10  HSLYFPHRVSSTVAKLRTEFTLSQGRLSL----NRWSTN--RKFQL----------KAVR 53
           HS     R+ S  A+LR           L    N  +      F L          K V 
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 54  DSASSNEDQNLESGKVAVA-ADTKTKDPVAKFQETLIS-LPPVAFVMKRHTRSSFAIGLS 111
           D  S+    ++     ++     + K  + K+ +     LP         T +   + + 
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV-----LTTNPRRLSI- 332

Query: 112 LSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVG 171
                                    + + +R G    D         ++    + L    
Sbjct: 333 -------------------------IAESIRDGLATWDN--------WKHVNCDKL---- 355

Query: 172 KSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTV 231
              + +E    V  L P     E +        + +   R ++F       PP       
Sbjct: 356 --TTIIESSLNV--LEP----AEYR--------KMF--DRLSVF-------PPSA----- 385

Query: 232 RWIPA-------NHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQ 284
             IP             +    +   L + ++ +KQ     I        +    L+NE 
Sbjct: 386 -HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI-PSIYLELKVKLENEY 443

Query: 285 KLNKLVIDSSNAKDFERAFKLNPKSEEPLDQ 315
            L++ ++D  N     + F  +      LDQ
Sbjct: 444 ALHRSIVDHYNIP---KTFDSDDLIPPYLDQ 471

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 53/197 (26%)

Query: 182 KVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPA----- 236
              RL    L+K+++ + +              F+   +++  +       ++ +     
Sbjct: 63  GTLRLFWTLLSKQEEMVQK--------------FV--EEVLRINYK-----FLMSPIKTE 101

Query: 237 -NHPFATTANDIDE-DLAQNN--VYQKQGVPFRIRAEHEALQKKLEALQNEQKL------ 286
              P   T   I++ D   N+  V+ K  V  R++  +  L++ L  L+  + +      
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS-RLQ-PYLKLRQALLELRPAKNVLIDGVL 159

Query: 287 --NK--LVIDSSNAKDFERAF-------KLNPKSEEPLDQNPFVNQSGDLRPP---RPDQ 332
              K  + +D   +   +           L   +               + P    R D 
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 333 APNG-YDSNSSSEEMQK 348
           + N     +S   E+++
Sbjct: 220 SSNIKLRIHSIQAELRR 236

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00