Citrus Sinensis ID: 018910
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| 225470559 | 574 | PREDICTED: inorganic phosphate transport | 0.830 | 0.505 | 0.760 | 1e-116 | |
| 357517309 | 574 | Inorganic phosphate transporter 2-1 [Med | 0.830 | 0.505 | 0.712 | 1e-112 | |
| 224107781 | 519 | hypothetical protein POPTRDRAFT_230519 [ | 0.702 | 0.472 | 0.820 | 1e-112 | |
| 47571341 | 581 | chloroplast phosphate transporter precur | 0.753 | 0.452 | 0.761 | 1e-112 | |
| 224100153 | 527 | low affinity inorganic phosphate transpo | 0.722 | 0.478 | 0.810 | 1e-108 | |
| 356524012 | 575 | PREDICTED: inorganic phosphate transport | 0.793 | 0.481 | 0.702 | 1e-108 | |
| 297814878 | 586 | PHT2_1 [Arabidopsis lyrata subsp. lyrata | 0.710 | 0.423 | 0.776 | 1e-106 | |
| 30688383 | 587 | inorganic phosphate transporter 2-1 [Ara | 0.710 | 0.422 | 0.779 | 1e-106 | |
| 30688378 | 613 | inorganic phosphate transporter 2-1 [Ara | 0.710 | 0.404 | 0.779 | 1e-106 | |
| 22450125 | 575 | phosphate hydrogen transporter [Spinacia | 0.785 | 0.476 | 0.711 | 1e-105 |
| >gi|225470559|ref|XP_002271876.1| PREDICTED: inorganic phosphate transporter 2-1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/313 (76%), Positives = 260/313 (83%), Gaps = 23/313 (7%)
Query: 1 MPPPFCSSSSRNTVSPEAFLLH-------KHRSS---SSALLLKPNLSLPRSSYSLLSLK 50
M P +C SSSR+ + EAFLLH KHRS+ +L LKP P+SS LL LK
Sbjct: 1 MTPSYCLSSSRHATTAEAFLLHNSHLHLPKHRSTLPKKDSLFLKPLNPPPKSSLFLLRLK 60
Query: 51 NSRLTHSFASISSFAEAEGEGEEEQNEGLQVQKHHHDEPTKTEAGDDDLPGMAQAFHISS 110
S+L+H FAS+SSFAEAEGE EG H +E KTE +LPGMAQAF+ISS
Sbjct: 61 TSKLSHPFASLSSFAEAEGE------EG----HHAKEEIAKTEG---ELPGMAQAFNISS 107
Query: 111 STASAISICIALAALTLPFFMKSLGQGLDIKTKLLSHATLLFGFYMAWNIGANDVANAMG 170
+TASAISICIA AAL+LP FM+SLG GL +KTKLLS+ATLLFGFYMAWNIGANDVANAMG
Sbjct: 108 NTASAISICIAFAALSLPLFMRSLGLGLTLKTKLLSYATLLFGFYMAWNIGANDVANAMG 167
Query: 171 TSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVTSVFQGKDTLLFAGLLSS 230
TSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILV +VFQGKDTLLFAGLLSS
Sbjct: 168 TSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVANVFQGKDTLLFAGLLSS 227
Query: 231 LAAAGTWLQVASYYGWPVSTTHCIVGSMVGFGLVYGGAGAVFWSSLARVTSSWVISPILG 290
LAAAGTWLQVAS+YGWPVSTTHCIVGSMVGFGLVYGG GAVFWSSLARVTSSWVISP++G
Sbjct: 228 LAAAGTWLQVASFYGWPVSTTHCIVGSMVGFGLVYGGHGAVFWSSLARVTSSWVISPLMG 287
Query: 291 ALVSFLVYKCIRR 303
A+VSFLVYKCIRR
Sbjct: 288 AMVSFLVYKCIRR 300
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357517309|ref|XP_003628943.1| Inorganic phosphate transporter 2-1 [Medicago truncatula] gi|24079961|gb|AAN46087.1| phosphate transporter PHT2-1 [Medicago truncatula] gi|355522965|gb|AET03419.1| Inorganic phosphate transporter 2-1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224107781|ref|XP_002314598.1| hypothetical protein POPTRDRAFT_230519 [Populus trichocarpa] gi|222863638|gb|EEF00769.1| hypothetical protein POPTRDRAFT_230519 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|47571341|gb|AAT35816.1| chloroplast phosphate transporter precursor [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
| >gi|224100153|ref|XP_002311765.1| low affinity inorganic phosphate transporter [Populus trichocarpa] gi|222851585|gb|EEE89132.1| low affinity inorganic phosphate transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356524012|ref|XP_003530627.1| PREDICTED: inorganic phosphate transporter 2-1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297814878|ref|XP_002875322.1| PHT2_1 [Arabidopsis lyrata subsp. lyrata] gi|297321160|gb|EFH51581.1| PHT2_1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|30688383|ref|NP_850633.1| inorganic phosphate transporter 2-1 [Arabidopsis thaliana] gi|75275184|sp|Q38954.1|PHT21_ARATH RecName: Full=Inorganic phosphate transporter 2-1, chloroplastic; AltName: Full=H(+)/Pi cotransporter; Short=AtPht2;1; Flags: Precursor gi|21435766|gb|AAM53960.1|AF515591_1 phosphate transporter precursor [Arabidopsis thaliana] gi|1402876|emb|CAA66826.1| putative phosphate permease [Arabidopsis thaliana] gi|1495255|emb|CAA66116.1| orf01 [Arabidopsis thaliana] gi|9293936|dbj|BAB01839.1| phosphate permease-like protein [Arabidopsis thaliana] gi|11136951|emb|CAC15560.1| phosphate transporter Pht2;1 [Arabidopsis thaliana] gi|332643660|gb|AEE77181.1| inorganic phosphate transporter 2-1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|30688378|ref|NP_189289.2| inorganic phosphate transporter 2-1 [Arabidopsis thaliana] gi|332643659|gb|AEE77180.1| inorganic phosphate transporter 2-1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|22450125|emb|CAD36013.1| phosphate hydrogen transporter [Spinacia oleracea] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| UNIPROTKB|Q9KPD0 | 433 | VC_2442 "Pho4 family protein" | 0.441 | 0.355 | 0.474 | 5.7e-36 | |
| TIGR_CMR|VC_2442 | 433 | VC_2442 "pho4 family protein" | 0.441 | 0.355 | 0.474 | 5.7e-36 | |
| TIGR_CMR|CPS_3637 | 431 | CPS_3637 "phosphate transporte | 0.435 | 0.352 | 0.460 | 3.1e-35 | |
| TIGR_CMR|CBU_0014 | 417 | CBU_0014 "phosphate transporte | 0.532 | 0.446 | 0.390 | 2.2e-34 | |
| TIGR_CMR|SO_3771 | 429 | SO_3771 "phosphate transporter | 0.575 | 0.468 | 0.384 | 2.8e-34 | |
| FB|FBgn0260795 | 667 | CG42575 [Drosophila melanogast | 0.438 | 0.229 | 0.457 | 7.7e-32 | |
| UNIPROTKB|F1P3I3 | 395 | SLC20A1 "Uncharacterized prote | 0.438 | 0.387 | 0.385 | 1.2e-28 | |
| ZFIN|ZDB-GENE-060929-828 | 662 | slc20a2 "solute carrier family | 0.435 | 0.229 | 0.407 | 6.2e-28 | |
| UNIPROTKB|Q5F4B0 | 530 | SLC20A2 "Uncharacterized prote | 0.435 | 0.286 | 0.394 | 1.2e-27 | |
| ZFIN|ZDB-GENE-040426-2217 | 652 | slc20a1a "solute carrier famil | 0.438 | 0.234 | 0.372 | 1.6e-27 |
| UNIPROTKB|Q9KPD0 VC_2442 "Pho4 family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 73/154 (47%), Positives = 101/154 (65%)
Query: 151 LFGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGI 210
+FGF MA IGANDVANAMGTSVGS ALT++QA++ A + EF+GA L G VT T++ G+
Sbjct: 30 VFGFLMAIGIGANDVANAMGTSVGSKALTVKQAIIIAMIFEFAGAYLAGGEVTETIRNGV 89
Query: 211 LVTSVFQGKDTXXXXXXXXXXXXXXTWLQVASYYGWPVSTTHCIVGSMVGFGLVYGGAGA 270
+ TS+F K TWL VASY GWPVSTTH I+G+++GF V G A
Sbjct: 90 IETSLFADKPDVLIYGMMSALLAAGTWLLVASYMGWPVSTTHSIIGAIIGFACVSVGTEA 149
Query: 271 VFWSSLARVTSSWVISPILGALVSFLVYKCIRRV 304
V WSS+ + SW+I+P++ ++L++ +R+
Sbjct: 150 VDWSSVKGIVGSWIITPVISGFFAYLIFVSAQRL 183
|
|
| TIGR_CMR|VC_2442 VC_2442 "pho4 family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CPS_3637 CPS_3637 "phosphate transporter family protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CBU_0014 CBU_0014 "phosphate transporter family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SO_3771 SO_3771 "phosphate transporter, putative" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0260795 CG42575 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P3I3 SLC20A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060929-828 slc20a2 "solute carrier family 20 (phosphate transporter), member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5F4B0 SLC20A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-2217 slc20a1a "solute carrier family 20, member 1a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00009459001 | SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (546 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00034533001 | • | 0.644 | |||||||||
| GSVIVG00015405001 | • | 0.611 | |||||||||
| GSVIVG00002274001 | • | 0.568 | |||||||||
| GSVIVG00035363001 | • | 0.512 | |||||||||
| GSVIVG00010970001 | • | • | 0.510 | ||||||||
| GSVIVG00035831001 | • | 0.496 | |||||||||
| GSVIVG00006007001 | • | 0.484 | |||||||||
| GSVIVG00003851001 | • | • | 0.458 | ||||||||
| GSVIVG00018146001 | • | 0.425 | |||||||||
| GSVIVG00011932001 | • | 0.416 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| COG0306 | 326 | COG0306, PitA, Phosphate/sulphate permeases [Inorg | 3e-53 | |
| pfam01384 | 268 | pfam01384, PHO4, Phosphate transporter family | 2e-47 | |
| COG0306 | 326 | COG0306, PitA, Phosphate/sulphate permeases [Inorg | 1e-20 | |
| pfam01384 | 268 | pfam01384, PHO4, Phosphate transporter family | 2e-17 |
| >gnl|CDD|223383 COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 3e-53
Identities = 79/160 (49%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 144 LLSHATLLFGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGALLMGTHVT 203
LL L+ + A+NIGAND ANA+GT+VGSGALT RQAVL AAV F GALL G +V
Sbjct: 3 LLLVLALIAALFFAFNIGANDTANAVGTAVGSGALTPRQAVLLAAVFNFLGALLGGGNVA 62
Query: 204 STMQKGILVTSVFQGKDTLLFAGLLSSLAAAGTWLQVASYYGWPVSTTHCIVGSMVGFGL 263
T+ GI+ + D+L AG+L++L AA W +A+Y G PVST+H ++G+++G GL
Sbjct: 63 ETIGSGIVDPGLLN--DSLTPAGVLAALLAAILWNLIATYLGIPVSTSHALIGAIIGAGL 120
Query: 264 VYGGAGAVFWSSLARVTSSWVISPILGALVSFLVYKCIRR 303
GG G V W L ++ +SWV+SPILG ++++L+Y +RR
Sbjct: 121 ALGG-GVVDWGVLGKIVASWVLSPILGGVLAYLLYSLLRR 159
|
Length = 326 |
| >gnl|CDD|216469 pfam01384, PHO4, Phosphate transporter family | Back alignment and domain information |
|---|
| >gnl|CDD|223383 COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216469 pfam01384, PHO4, Phosphate transporter family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| COG0306 | 326 | PitA Phosphate/sulphate permeases [Inorganic ion t | 100.0 | |
| PF01384 | 326 | PHO4: Phosphate transporter family; InterPro: IPR0 | 100.0 | |
| KOG2493 | 512 | consensus Na+/Pi symporter [Inorganic ion transpor | 100.0 | |
| COG0306 | 326 | PitA Phosphate/sulphate permeases [Inorganic ion t | 99.97 | |
| KOG2493 | 512 | consensus Na+/Pi symporter [Inorganic ion transpor | 99.97 | |
| PF01384 | 326 | PHO4: Phosphate transporter family; InterPro: IPR0 | 99.97 | |
| TIGR00341 | 325 | conserved hypothetical protein TIGR00341. This con | 83.19 |
| >COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=329.79 Aligned_cols=197 Identities=25% Similarity=0.334 Sum_probs=174.8
Q ss_pred cccCchhhhHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhHHHHHHHHHHHHHHHHHhhhhHhHHHHHHH
Q 018910 94 AGDDDLPGMAQAFHISSSTASAISICIALAALTLPFFMKSLGQGLDIKTKLLSHATLLFGFYMAWNIGANDVANAMGTSV 173 (349)
Q Consensus 94 ~~~~~l~ki~~~~~~Sp~~~~~i~~~l~~lv~~~~~~~~~~~~~~~~~~~~f~~l~iisA~~~AFs~GANDvaNa~G~iV 173 (349)
++|+.+.+++.+|++||++++.+++++...+. +..++ .++..+.|++||++|+++||++||+||+||+||++||++
T Consensus 127 ~~~~~~~~Iv~swvlsPii~~~ia~~l~~~~~---~~~~~-~~~~~~~~~~~r~l~i~sa~~~aF~hGaNdvanaiGpi~ 202 (326)
T COG0306 127 VDWGVLGKIVASWVLSPILGGVLAYLLYSLLR---RLIVG-KDGKRKVERIFRILLIISASLVAFAHGANDVANAIGPLV 202 (326)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhc-cccchhHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHH
Confidence 78999999999999999999655555433221 21221 136678899999999999999999999999999999999
Q ss_pred hcC--cchHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCceeccccCCchhHHHHHHHHHHHHHHHHHHHHHhhCCccchh
Q 018910 174 GSG--ALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVTSVFQGKDTLLFAGLLSSLAAAGTWLQVASYYGWPVSTT 251 (349)
Q Consensus 174 gsg--~l~~~~alllaai~i~lGall~G~rVi~TvG~~I~~l~~~~g~p~~~~~a~~aAllaAai~vliaT~lGiPVSTT 251 (349)
+.. ...|.|++++|++++++|++++|+||+||+|+||++++|.++ +|+++++++++.+++.+|+|+|||
T Consensus 203 ~~~~~~~~~~~v~~~g~~~i~lG~~~~g~Rvi~TvG~kIt~L~p~~g---------fsA~~~sa~~v~~as~~GlPvStT 273 (326)
T COG0306 203 AVLISSLPPFWVLVLGGIALALGTLTGGPRVIETVGKKITELTPSRG---------FSAQLSSAITVLLASLLGLPVSTT 273 (326)
T ss_pred HHHhhccccHHHHHHHHHHHHHHHHHccHHHHHHHhhhhcccCcchh---------HHHHHHHHHHHHHHHHcCCCcccc
Confidence 887 488999999999999999999999999999999999987766 899999999999999999999999
Q ss_pred hHhhhHHHHHHHhhCCCCcccHHhHhHhhhhhhhchhHHHHHHHHHHHHHHHH
Q 018910 252 HCIVGSMVGFGLVYGGAGAVFWSSLARVTSSWVISPILGALVSFLVYKCIRRV 304 (349)
Q Consensus 252 haiVGsIiGvGla~~G~~~V~w~~l~~Iv~sWilTPpia~iis~ll~~ll~~i 304 (349)
|+++||++|+|++. +.+.+||+.+++|+.+|++|||+++++++++|++++.+
T Consensus 274 ~~~vgaI~GvG~~~-~~~~v~~~~~~~Iv~aWvvT~p~a~~ls~~~~~~~~~~ 325 (326)
T COG0306 274 HTLVGAVLGVGLAL-AGGAVNWKVIKNIVLAWVVTLPAAALLSALLYWLLLFI 325 (326)
T ss_pred eeeeeeeeecchhh-ccCceeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999874 44689999999999999999999999999999998754
|
|
| >PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter [] | Back alignment and domain information |
|---|
| >KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter [] | Back alignment and domain information |
|---|
| >TIGR00341 conserved hypothetical protein TIGR00341 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00