Citrus Sinensis ID: 018934

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcEEEEEEEcccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHEHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccccccc
Coil and Loop (DISEMBL)
metnnsykngALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFifrsntaslplfkfpvisrICFLSLVGSFFRILGytgiayssptlasmignltpgFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLykgptimstasipaqslhwtpqstrsrWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIisapicfvgesnlsawrlkpdiELASIVYSAFFGLSFITVVHTFglrmkgpvytaIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGkandeagknkdsckipllqsp
Flexible Loop (DISEMBL)
metnnsykngALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKandeagknkdsckipllqsp
Low Complexity Region (SEG)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWViggllllisnllisVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSiaiaaiTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered region (IsUnstruct)
********NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Disordered Region (DISOPRED)
************FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST******************WVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW**********************
Disordered Region (DISEMBL)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered Region (DISPRO)
****NSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS**************SRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	348	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.948	0.896	0.544	7e-92
F4KHA8	370	WAT1-related protein At5g	no	no	0.954	0.897	0.535	2e-87
F4JK59	347	WAT1-related protein At4g	no	no	0.922	0.925	0.522	1e-75
Q94JU2	367	WAT1-related protein At3g	no	no	0.945	0.896	0.453	1e-72
Q945L4	339	WAT1-related protein At5g	no	no	0.922	0.946	0.432	4e-68
Q9LRS5	353	WAT1-related protein At3g	no	no	0.931	0.917	0.448	2e-63
Q56X95	355	WAT1-related protein At3g	no	no	0.959	0.940	0.438	3e-61
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.974	0.941	0.422	1e-60
F4IYZ0	358	WAT1-related protein At3g	no	no	0.959	0.932	0.424	8e-59
F4I5D5	375	WAT1-related protein At1g	no	no	0.985	0.914	0.338	2e-44

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 184/338 (54%), Positives = 232/338 (68%), Gaps = 8/338 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 198

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL     LISVWYI+Q T+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LK
Sbjct: 199 LLLASQYFLISVWYILQ-TRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLK 257

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           PDI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHL
Sbjct: 258 PDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHL 317

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 345
           GSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 318 GSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  323 bits (827), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 182/340 (53%), Positives = 234/340 (68%), Gaps = 8/340 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL    LL+SVWYI+Q T+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LK
Sbjct: 200 LLLATQYLLVSVWYILQ-TRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILK 258

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           P + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+L
Sbjct: 259 PGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYL 318

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 347
           GSVIG +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 319 GSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  283 bits (724), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/333 (52%), Positives = 226/333 (67%), Gaps = 12/333 (3%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAM+A ECT VG +I++K AT +G S++VFVFY+Y   TLVLLLL     RS   SLP 
Sbjct: 18  FTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSR--SLPT 75

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K  +  +I  L+L+G   R+ G  GI YSSPTL+S I NLTP FTFILAI FRME + L
Sbjct: 76  AKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVML 135

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLL 192
            S +T AKIIGT+VS+SGA+++VLYKGP ++  AS           S  S W+IGGLLL 
Sbjct: 136 RSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASF---------TSFESSWIIGGLLLG 186

Query: 193 ISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIE 252
           +  LL+SVW+I+Q T  M++YP E  V   Y L AT+IS  +C + E +L++W+LKP   
Sbjct: 187 LQFLLLSVWFILQ-THIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFS 245

Query: 253 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI 312
           LAS++YS  F  S  +V+HT+GL +KGPVY ++FKPLSIAIA   + IFL + LHLGSVI
Sbjct: 246 LASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVI 305

Query: 313 GGVITCVGFYTVLWGKANDEAGKNKDSCKIPLL 345
           G VI   GFYTV+WGKA +++ K     +  LL
Sbjct: 306 GSVILSFGFYTVIWGKAREDSTKTVSDSEQSLL 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  273 bits (699), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/342 (45%), Positives = 212/342 (61%), Gaps = 13/342 (3%)

Query: 14  TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF 73
           TA+V  EC  VG N +FK AT KGMS+ VF+ YSY    L+LL      FRS T  LP  
Sbjct: 14  TALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRT--LPPM 71

Query: 74  KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALS 133
            F ++ +I  L ++G    I+GYTGI YSSPTLAS I NLTP FTF+LA++FRME+++  
Sbjct: 72  NFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFK 131

Query: 134 SLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLI 193
             S+ AK++GT+VS+ GA +V LY GP +++  S P+ SL    QST   W++G   L +
Sbjct: 132 RTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPPSVSLR--SQSTNPNWILGAGFLAV 188

Query: 194 SNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIE 252
               + +WYI+ QTQ M+ YPAEF V   Y +  +  +A +    E N L AW++KP+I 
Sbjct: 189 EYFCVPLWYIV-QTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIA 247

Query: 253 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI 312
           L SIV S  FG      +HT+ LR+KGP++ A+FKPLSIAIA     IFL ++L++GS+I
Sbjct: 248 LVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLI 307

Query: 313 GGVITCVGFYTVLWGKA------NDEAGKNKDSCKIPLLQSP 348
           G  +  +GFYTV+WGKA       D+   N +      L SP
Sbjct: 308 GATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDSP 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  258 bits (659), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/347 (43%), Positives = 220/347 (63%), Gaps = 26/347 (7%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           ++G + TAMV  E + VG N + K ATSKG+S FV + YSY   +L+LL L  F FRS  
Sbjct: 9   RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSR- 67

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP   F ++  +  L L+ S F+ILGY GI YSSPTL+S + N+ P FTFILA++FRM
Sbjct: 68  -SLPPLTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRM 126

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIG 187
           EN++L   S+ AK++GT++S+ GA++V LY GP +M               S+ S W+IG
Sbjct: 127 ENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLM---------------SSHSDWIIG 171

Query: 188 GLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSAWR 246
           G LL +  +L+SV Y++    TM  YP+  VVTL++ +   ++ A +  + E  N  AW 
Sbjct: 172 GGLLALQYILVSVSYLV-MAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWV 230

Query: 247 LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEAL 306
           ++ DI L ++V +      +  V+HT+ +  KGPVY ++FKPLSI IAA+++FIFL E+L
Sbjct: 231 IRFDITLITVVATGILNSGY-YVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESL 289

Query: 307 HLGSVIGGVITCVGFYTVLWGKANDE------AGKNKDSCKIPLLQS 347
           +LGSV+GG++  +GFY VLWGKA ++      A ++  S   PLL +
Sbjct: 290 YLGSVMGGILISIGFYMVLWGKAKEDKVDIIGAIESSPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  243 bits (619), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 216/332 (65%), Gaps = 8/332 (2%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E  +VG + +FK+ATSKG++ + F+ YSY   +L+LL    F  RS  
Sbjct: 10  REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSR- 68

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L L+GS + I GY GI YSSPTLAS I N+TP  TFILAIIFRM
Sbjct: 69  -SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA---QSLHWTPQSTRSRW 184
           E ++    S+ AK++GT++S+ GA++VVLY GP +   +S P    + L     S+ S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLS 243
           +IGG LL I ++ +SV +I+ Q + M  YPA F V+ LY +  +I+++ I  V E +N S
Sbjct: 188 LIGGALLTIRDIFVSVSFIL-QAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPS 246

Query: 244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLS 303
            W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA + S +FL+
Sbjct: 247 VWIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLN 305

Query: 304 EALHLGSVIGGVITCVGFYTVLWGKANDEAGK 335
           ++L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 306 DSLYLGCLIGGLLITLGFYAVMWGKANEEKDQ 337

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  236 bits (601), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/347 (43%), Positives = 212/347 (61%), Gaps = 13/347 (3%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           ++  L TAM+A E   V  N +FK ATSKG++ + F+ YSY   ++VLL     IF   +
Sbjct: 9   RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLP--SHIFSYRS 66

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++ +I  L L+GS + I G+ GI YS+PTLAS I N+ P  TFILAIIFRM
Sbjct: 67  RSLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRM 126

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW---TPQSTRSRW 184
           E  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P   L        S+ S W
Sbjct: 127 EKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDW 186

Query: 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLS 243
           +IGG LL I + L+ V +I+ Q   MKLYPA F V+  Y L A+I+++ I  V E +N S
Sbjct: 187 IIGGCLLAIKDTLVPVAFIL-QAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPS 245

Query: 244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLS 303
            W +  DI L  IV    F   +   +H + +R KGPVY AIF+PLSI IA I   IFL 
Sbjct: 246 IWIIHFDITLVCIVVGGIFNPGYYA-IHLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLG 304

Query: 304 EALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK---DSCKIPLLQS 347
           ++ +LGS++GG++  +GFYTV+WGKA +  GK +    S + PLL  
Sbjct: 305 DSFYLGSLVGGILISLGFYTVMWGKAKE--GKTQFLSLSEETPLLDE 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/350 (42%), Positives = 222/350 (63%), Gaps = 11/350 (3%)

Query: 3   TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
           T + ++  A+F TAM+  E ++VG + +FK ATSKG++  ++ F  Y+     LLLL   
Sbjct: 7   TASPWRREAVFLTAMLVVETSVVGISTLFKFATSKGLN--IYPFLGYSYLLASLLLLPSL 64

Query: 62  IFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFIL 121
            F + ++SLP     ++S+I  L  +GS + I GY GI YSSPTLAS I N+TP  TFIL
Sbjct: 65  FFTNRSSSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFIL 124

Query: 122 AIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSL-HWTP--Q 178
           AIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +   ++P   
Sbjct: 125 AIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLS 184

Query: 179 STRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVG 238
           S+ S W+IGG LL +  + +SV +I+ Q   M +YPA F V+ LY +  +I+++ I  V 
Sbjct: 185 SSNSDWLIGGALLTMQGIFVSVSFIL-QAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVV 243

Query: 239 E-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAIT 297
           E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA + 
Sbjct: 244 EKNNPSVWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVM 302

Query: 298 SFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK--NKDSCKIPLL 345
             IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PLL
Sbjct: 303 GAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPLL 352

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  227 bits (579), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 217/349 (62%), Gaps = 15/349 (4%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E +IVG + +FK+ATSKG++  ++ F SY+     LLLL    F + +
Sbjct: 10  REAVFLTAMLAGETSIVGLSTLFKVATSKGLN--IYPFLSYSYLLASLLLLPSLFFTNRS 67

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L  +GS + I G  GI YS+PTLAS IGN+ P  TFILA+IFRM
Sbjct: 68  RSLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA---QSLHWTPQSTRSRW 184
           E ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P    + L     S++S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLS 243
           +IGG +L I  + +SV +I+ QT  M+ YP  F V++LY L  +I+++ I  V E +N S
Sbjct: 188 LIGGAILTIQGIFVSVSFIL-QTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPS 246

Query: 244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLS 303
            W +  DI L +IV +     S   V+H++ +R K P+Y AIFKPLSI IA +   IFL+
Sbjct: 247 IWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLN 305

Query: 304 EALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK-----DSCKIPLLQS 347
           ++L+LG +IGG++  +GFY V+WGKAN+E  KNK        K PLL S
Sbjct: 306 DSLYLGCLIGGILITLGFYVVMWGKANEE--KNKLLSFSGKEKTPLLLS 352

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 190/369 (51%), Gaps = 26/369 (7%)

Query: 1   METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP 60
           ME          F AM   E   +   I+ K A + GMS FVFV Y+ A  + +LLL F 
Sbjct: 1   MEVKVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGS-ILLLPFS 59

Query: 61  FIF-RSNTASLPLFKFPVISRICFLSLVGSF-FRILGYTGIAYSSPTLASMIGNLTPGFT 118
           F+F R+      +F +P++ R+ FL   G F F+ L + G+ +SSP +   +G   P F+
Sbjct: 60  FLFHRNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFS 119

Query: 119 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI-PAQSLHWTP 177
           F+L+II     L   + ST AK++GT+VS+SGA +  LYKGP I   +S  P + L   P
Sbjct: 120 FLLSIILGRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVP 179

Query: 178 Q-----STRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISA 232
           +     +    W +G + L ++   +S++ ++Q T T+K YP    V   Y +  TI   
Sbjct: 180 KLLVYYNLPDNWFLGCIFLAVAVFSVSLFNVVQ-TGTVKKYPHVMKVASFYSIVGTIQCL 238

Query: 233 PICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIA 292
                 E +LSAW+++P+ +L  I+ +  FG    T VH    +MKGP Y  +FKP  I 
Sbjct: 239 LFSLFMERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIF 298

Query: 293 IAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK---------ANDEAG-------KN 336
            A +    F   +LH GSV+G  I  VG++TV WG+         +N+E         ++
Sbjct: 299 WATLFGTSFFVNSLHYGSVLGAAIAGVGYFTVSWGQLKESEEKQSSNEERKSIKTIHHRD 358

Query: 337 KDSCKIPLL 345
           +D  K+PLL
Sbjct: 359 EDEYKVPLL 367

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
42568214	368	nodulin MtN21 /EamA-like transporter fam	0.948	0.896	0.544	4e-90
334188088	382	nodulin MtN21 /EamA-like transporter fam	0.948	0.863	0.544	6e-90
225452524	359	PREDICTED: auxin-induced protein 5NG4 [V	0.988	0.958	0.515	3e-89
296087698	344	unnamed protein product [Vitis vinifera]	0.945	0.956	0.532	2e-88
297801560	368	nodulin MtN21 family protein [Arabidopsi	0.945	0.894	0.535	4e-87
356524437	427	PREDICTED: auxin-induced protein 5NG4-li	0.956	0.779	0.533	3e-86
297801562	367	hypothetical protein ARALYDRAFT_330483 [	0.954	0.904	0.536	9e-86
15242612	370	nodulin MtN21 /EamA-like transporter fam	0.954	0.897	0.535	1e-85
10177510	346	nodulin-like protein [Arabidopsis thalia	0.945	0.950	0.531	2e-84
255552660	353	Auxin-induced protein 5NG4, putative [Ri	0.951	0.937	0.558	1e-83

>gi|42568214|ref|NP_198840.2| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|10177511|dbj|BAB10905.1| nodulin-like protein [Arabidopsis thaliana] gi|30725298|gb|AAP37671.1| At5g40240 [Arabidopsis thaliana] gi|110743630|dbj|BAE99652.1| hypothetical protein [Arabidopsis thaliana] gi|332007140|gb|AED94523.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 184/338 (54%), Positives = 232/338 (68%), Gaps = 8/338 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 198

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL     LISVWYI+Q T+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LK
Sbjct: 199 LLLASQYFLISVWYILQ-TRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLK 257

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           PDI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHL
Sbjct: 258 PDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHL 317

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 345
           GSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 318 GSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188088|ref|NP_001190441.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007141|gb|AED94524.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 184/338 (54%), Positives = 232/338 (68%), Gaps = 8/338 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 35  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 92

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 93  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 152

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 153 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 212

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL     LISVWYI+Q T+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LK
Sbjct: 213 LLLASQYFLISVWYILQ-TRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLK 271

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           PDI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHL
Sbjct: 272 PDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHL 331

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 345
           GSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 332 GSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 369

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452524|ref|XP_002279776.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 184/357 (51%), Positives = 239/357 (66%), Gaps = 13/357 (3%)

Query: 1   METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP 60
           M   +  ++   F  MV  E T V  N++FK ATS+GMS +VF+ YSYA  TL+L  L  
Sbjct: 1   MGDGHCLRDMVPFLGMVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLL- 59

Query: 61  FIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI 120
           FIF      LP FKF ++ +IC L  +G    I+ Y GI YSSPTLAS+IGNLTP  TF+
Sbjct: 60  FIFNGKRLLLPPFKFSLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFM 119

Query: 121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ--SLHWTPQ 178
           LAI FRME LAL SLS+WAKI GT+ S+SGA++VVLYKG  + ST+S P Q  SLH    
Sbjct: 120 LAIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQLTSTSS-PLQFISLHQPLN 178

Query: 179 STRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVG 238
           S + +WVIGGLLL+  +LL+S+WYI+Q  Q M++YP E VV  L  L  TIISAP+C + 
Sbjct: 179 SQQMKWVIGGLLLVAEDLLVSIWYIVQ-AQVMEVYPEELVVVFLSNLCLTIISAPVCLIA 237

Query: 239 ESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITS 298
           E NLS WR++ DI LA+IV+SAF+G +F  VV T+ +R+KGPVY A+F PLSI IA    
Sbjct: 238 EKNLSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMG 297

Query: 299 FIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN--------KDSCKIPLLQS 347
            +FL + L+LGS+IG ++  +GFY V WGKA +E  ++          + KIPLL S
Sbjct: 298 VMFLGDTLYLGSIIGAIVISIGFYIVTWGKAKEETIEDFGVGSLESLSNPKIPLLLS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087698|emb|CBI34954.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 182/342 (53%), Positives = 234/342 (68%), Gaps = 13/342 (3%)

Query: 16  MVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKF 75
           MV  E T V  N++FK ATS+GMS +VF+ YSYA  TL+L  L  FIF      LP FKF
Sbjct: 1   MVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLL-FIFNGKRLLLPPFKF 59

Query: 76  PVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSL 135
            ++ +IC L  +G    I+ Y GI YSSPTLAS+IGNLTP  TF+LAI FRME LAL SL
Sbjct: 60  SLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFMLAIFFRMEKLALRSL 119

Query: 136 STWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ--SLHWTPQSTRSRWVIGGLLLLI 193
           S+WAKI GT+ S+SGA++VVLYKG  + ST+S P Q  SLH    S + +WVIGGLLL+ 
Sbjct: 120 SSWAKITGTIASISGALIVVLYKGLQLTSTSS-PLQFISLHQPLNSQQMKWVIGGLLLVA 178

Query: 194 SNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIEL 253
            +LL+S+WYI+Q  Q M++YP E VV  L  L  TIISAP+C + E NLS WR++ DI L
Sbjct: 179 EDLLVSIWYIVQ-AQVMEVYPEELVVVFLSNLCLTIISAPVCLIAEKNLSVWRVELDIAL 237

Query: 254 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIG 313
           A+IV+SAF+G +F  VV T+ +R+KGPVY A+F PLSI IA     +FL + L+LGS+IG
Sbjct: 238 AAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGVMFLGDTLYLGSIIG 297

Query: 314 GVITCVGFYTVLWGKANDEAGKN--------KDSCKIPLLQS 347
            ++  +GFY V WGKA +E  ++          + KIPLL S
Sbjct: 298 AIVISIGFYIVTWGKAKEETIEDFGVGSLESLSNPKIPLLLS 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801560|ref|XP_002868664.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314500|gb|EFH44923.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (839), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 182/340 (53%), Positives = 228/340 (67%), Gaps = 11/340 (3%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A ECT VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECTTVGSNTLFKAATIRGLSFYVFVFYSYVVSTLLLLPLSLIFGRSR--RLPS 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P   +I  L LVG   +I G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPFFFKIFLLGLVGFMSQIAGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++++LYKGP +++ AS     P  SLH    S  S+W IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVILLYKGPQVLAAASFTPLSPTISLHQHLASLESKWTIGG 198

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL     LISVWYI+Q T+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LK
Sbjct: 199 LLLASQYFLISVWYILQ-TRVMEVYPEEITVVFFYNLFATLISVPVCIFAESNLTSWVLK 257

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           PDI LA+I+YS  F   F  + HT+GL MKGPVY ++F+PLSIAIA     IFL ++LHL
Sbjct: 258 PDISLAAIIYSGVFVSLFSALTHTWGLHMKGPVYISLFRPLSIAIAVAMGAIFLGDSLHL 317

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP 348
           GSVIG +I C+GFYTV+WGKA ++  K     +    QSP
Sbjct: 318 GSVIGSMILCIGFYTVIWGKAREDTIKTVAGSE----QSP 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524437|ref|XP_003530835.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 184/345 (53%), Positives = 237/345 (68%), Gaps = 12/345 (3%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA ECT VG N++FK AT KG+SY+ F+ YS+A +TL LLL  PF+FR +   LP 
Sbjct: 74  FTAMVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFAVSTLFLLLPLPFVFRWSRG-LPP 132

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
               +I RI  L ++G   ++ GY G+ Y+SPTLAS + NL P FTFILAIIFRME +AL
Sbjct: 133 LNLSLIFRIFLLGVIGLTAQLCGYKGLKYTSPTLASALSNLIPAFTFILAIIFRMEKVAL 192

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSR--WVIGGLL 190
            S ST AKI+G+LVS+SGA++VVLYKGP I+ST+S        +P  + S+  WV+GG L
Sbjct: 193 RSPSTMAKILGSLVSISGALIVVLYKGPIILSTSSPQPSPTTDSPMDSTSQTNWVLGGSL 252

Query: 191 LLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPD 250
           L I  LL+ +WYI+Q T  MK YPAEF+V  LY L  T+IS PIC + E+NLS+W++  D
Sbjct: 253 LAIEFLLVPIWYIVQ-TNIMKQYPAEFIVVFLYNLTGTLISTPICLLLEANLSSWKINCD 311

Query: 251 IELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGS 310
           I L +I+YS FF     ++VHT+GL +KGPVY +IFKPLSI +AA  S IFL +AL+ G+
Sbjct: 312 ITLIAIIYSGFFSTGLSSLVHTWGLHLKGPVYISIFKPLSIVVAAALSVIFLGDALYFGT 371

Query: 311 VIGGVITCVGFYTVLWGKANDEAGKNKD--------SCKIPLLQS 347
           V+G VI   GFY VLWGKA +E     D        + K PLLQS
Sbjct: 372 VVGAVILSFGFYAVLWGKAKEEELTVVDFDDIRPPSNTKSPLLQS 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801562|ref|XP_002868665.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata] gi|297314501|gb|EFH44924.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata]

 Score =  323 bits (827), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 183/341 (53%), Positives = 232/341 (68%), Gaps = 9/341 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVGATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFYIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQVVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++VVLYKGP +++ A++    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVVLYKGPKVLTDATLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL    LL+SVWYI+Q T+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LK
Sbjct: 200 LLLATQYLLVSVWYILQ-TRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLTSFVLK 258

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           P + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     IFL +AL+L
Sbjct: 259 PGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVIFLGDALYL 318

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN--KDSCKIPLLQS 347
            SVIG VI  +GFYTV+WGKA +++ K       + PLL S
Sbjct: 319 RSVIGSVILSLGFYTVIWGKAREDSTKTVADTEQQSPLLPS 359

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242612|ref|NP_198839.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007139|gb|AED94522.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/340 (53%), Positives = 234/340 (68%), Gaps = 8/340 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
           LLL    LL+SVWYI+Q T+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LK
Sbjct: 200 LLLATQYLLVSVWYILQ-TRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILK 258

Query: 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHL 308
           P + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+L
Sbjct: 259 PGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYL 318

Query: 309 GSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 347
           GSVIG +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 319 GSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177510|dbj|BAB10904.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 231/337 (68%), Gaps = 8/337 (2%)

Query: 16  MVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKF 75
           MVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP  K 
Sbjct: 1   MVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPSAKT 58

Query: 76  PVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSL 135
           PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L S 
Sbjct: 59  PVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSS 118

Query: 136 STWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGGLLL 191
           +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGGLLL
Sbjct: 119 ATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLL 178

Query: 192 LISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDI 251
               LL+SVWYI+Q T+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP +
Sbjct: 179 ATQYLLVSVWYILQ-TRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGV 237

Query: 252 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV 311
            LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+LGSV
Sbjct: 238 SLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSV 297

Query: 312 IGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 347
           IG +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 298 IGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 334

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552660|ref|XP_002517373.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223543384|gb|EEF44915.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/351 (55%), Positives = 238/351 (67%), Gaps = 20/351 (5%)

Query: 7   YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSN 66
           YKN   F AMVAAEC  VG N IFK A+ KGM+Y+VF+FY+    TLVLL +  F  RS 
Sbjct: 7   YKNILPFAAMVAAECAAVGVNTIFKAASLKGMNYYVFIFYTTLINTLVLLPILFFFCRST 66

Query: 67  TAS--LPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAII 124
           T +  L LF+FPV S+IC + ++G   +I  Y GI YSSPTL+S + NLT  FTFILAI+
Sbjct: 67  TINPRLSLFRFPVSSKICIVGIIGVITQIASYKGIEYSSPTLSSALSNLTLPFTFILAIV 126

Query: 125 FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRW 184
            RME L   S  T AKIIGT+VS+SGA++VVLYKGP I  T+ I         +ST+S W
Sbjct: 127 LRMEKLDFKSSRTQAKIIGTVVSISGALMVVLYKGPVIGLTSLI---------RSTKSDW 177

Query: 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSA 244
           VIGGLLL I   L SVWYIIQ      +YPAE  VT L  L++TII+AP+CF+ E NLSA
Sbjct: 178 VIGGLLLSIQYSLYSVWYIIQTQIIQ-IYPAEIQVTFLVNLYSTIIAAPVCFLAEPNLSA 236

Query: 245 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSE 304
           WRL+PDIELA++ YS  FG SFIT+VH +GLR KGPVY   FKPLSIAIAA    +FL +
Sbjct: 237 WRLRPDIELAALAYSGLFGASFITIVHLWGLRQKGPVYVTSFKPLSIAIAAAMGALFLGD 296

Query: 305 ALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS--------CKIPLLQS 347
           ALHLGSVIG +   VGFY ++WGK  +E  +  DS         + PLLQS
Sbjct: 297 ALHLGSVIGAIFISVGFYALIWGKLQEEKIEECDSDTSNSPINSRSPLLQS 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.954	0.897	0.5	3.3e-79
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.928	0.930	0.488	7.1e-77
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.902	0.855	0.451	1.4e-69
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.936	0.923	0.420	1.3e-61
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.971	0.938	0.407	5.5e-61
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.931	0.912	0.416	2.4e-60
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.931	0.905	0.412	2.7e-59
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.781	0.802	0.400	2.2e-50
TAIR|locus:2020688	375	UMAMIT36 "AT1G70260" [Arabidop	0.933	0.866	0.334	5.7e-43
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.951	0.850	0.318	1.7e-41

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 170/340 (50%), Positives = 221/340 (65%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L   IF   +  LP 
Sbjct:    22 FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPL-SLIF-GRSKRLPS 79

Query:    73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
              K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct:    80 AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query:   133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVXXX 188
              S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+   
Sbjct:   140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query:   189 XXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248
                        VWYI+Q T+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LK
Sbjct:   200 LLLATQYLLVSVWYILQ-TRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILK 258

Query:   249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHL 308
             P + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLS         +FL +AL+L
Sbjct:   259 PGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYL 318

Query:   309 GSVIGGVITCVGFYTVLWGKANDEAGKNKDSCK-IPLLQS 347
             GSVIG +I  +GFYTV+WGKA +++ K     +  PLL S
Sbjct:   319 GSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 164/336 (48%), Positives = 215/336 (63%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             FTAM+A ECT VG +I++K AT +G S++VFVFY+Y   TLVLLLL   IF   + SLP 
Sbjct:    18 FTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLL-SLIF-GRSRSLPT 75

Query:    73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
              K  +  +I  L+L+G   R+ G  GI YSSPTL+S I NLTP FTFILAI FRME + L
Sbjct:    76 AKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVML 135

Query:   133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVXXXXXXX 192
              S +T AKIIGT+VS+SGA+++VLYKGP ++  AS           S  S W+       
Sbjct:   136 RSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFT---------SFESSWIIGGLLLG 186

Query:   193 XXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIE 252
                    VW+I+Q T  M++YP E  V   Y L AT+IS  +C + E +L++W+LKP   
Sbjct:   187 LQFLLLSVWFILQ-THIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFS 245

Query:   253 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHLGSVI 312
             LAS++YS  F  S  +V+HT+GL +KGPVY ++FKPLS       + IFL + LHLGSVI
Sbjct:   246 LASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVI 305

Query:   313 GGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 347
             G VI   GFYTV+WGKA +++ K   DS +  LL S
Sbjct:   306 GSVILSFGFYTVIWGKAREDSTKTVSDSEQSLLLPS 341

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 145/321 (45%), Positives = 198/321 (61%)

Query:    14 TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF 73
             TA+V  EC  VG N +FK AT KGMS+ VF+ YSY    L+LL      FRS T  LP  
Sbjct:    14 TALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRT--LPPM 71

Query:    74 KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALS 133
              F ++ +I  L ++G    I+GYTGI YSSPTLAS I NLTP FTF+LA++FRME+++  
Sbjct:    72 NFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFK 131

Query:   134 SLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVXXXXXXXX 193
               S+ AK++GT+VS+ GA +V LY GP +++  S P+ SL    QST   W+        
Sbjct:   132 RTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPPSVSLR--SQSTNPNWILGAGFLAV 188

Query:   194 XXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIE 252
                   +WYI+Q TQ M+ YPAEF V   Y +  +  +A +    E N L AW++KP+I 
Sbjct:   189 EYFCVPLWYIVQ-TQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIA 247

Query:   253 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHLGSVI 312
             L SIV S  FG      +HT+ LR+KGP++ A+FKPLS         IFL ++L++GS+I
Sbjct:   248 LVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLI 307

Query:   313 GGVITCVGFYTVLWGKANDEA 333
             G  +  +GFYTV+WGKA + A
Sbjct:   308 GATVITIGFYTVMWGKAKEVA 328

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 141/335 (42%), Positives = 207/335 (61%)

Query:     3 TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
             T + ++  A+F TAM+A E  +VG + +FK+ATSKG++ + F+ YSY   +L  LLL   
Sbjct:     4 TVSLWRREAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASL--LLLPSL 61

Query:    62 IFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFIL 121
              F   + SLP     ++S+I  L L+GS + I GY GI YSSPTLAS I N+TP  TFIL
Sbjct:    62 FFTDRSRSLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFIL 121

Query:   122 AIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW-TP--Q 178
             AIIFRME ++    S+ AK++GT++S+ GA++VVLY GP +   +S P  +    +P   
Sbjct:   122 AIIFRMEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLS 181

Query:   179 STRSRWVXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVG 238
             S+ S W+              V +I+Q  + M  YPA F V+ LY +  +I+++ I  V 
Sbjct:   182 SSNSDWLIGGALLTIRDIFVSVSFILQ-AKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVV 240

Query:   239 E-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXT 297
             E +N S W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLS       
Sbjct:   241 EKNNPSVWIIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVM 299

Query:   298 SFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 332
             S +FL+++L+LG +IGG++  +GFY V+WGKAN+E
Sbjct:   300 SAVFLNDSLYLGCLIGGLLITLGFYAVMWGKANEE 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 143/351 (40%), Positives = 213/351 (60%)

Query:     3 TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
             T + ++  A+F TAM+  E ++VG + +FK ATSKG++ + F+ YSY    L  LLL P 
Sbjct:     7 TASPWRREAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYL---LASLLLLPS 63

Query:    62 IFRSN-TASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI 120
             +F +N ++SLP     ++S+I  L  +GS + I GY GI YSSPTLAS I N+TP  TFI
Sbjct:    64 LFFTNRSSSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFI 123

Query:   121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLH-WTP-- 177
             LAIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +   ++P  
Sbjct:   124 LAIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPL 183

Query:   178 QSTRSRWVXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFV 237
              S+ S W+              V +I+Q    M +YPA F V+ LY +  +I+++ I  V
Sbjct:   184 SSSNSDWLIGGALLTMQGIFVSVSFILQ-AHIMSVYPAAFRVSFLYTVCVSIVTSTIGLV 242

Query:   238 GE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXX 296
              E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLS      
Sbjct:   243 VEKNNPSVWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVV 301

Query:   297 TSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK--DSCKIPLL 345
                IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PLL
Sbjct:   302 MGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPLL 352

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 139/334 (41%), Positives = 196/334 (58%)

Query:     8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
             ++  L TAM+A E   V  N +FK ATSKG++ + F+ YSY   ++VLL    F +RS  
Sbjct:     9 RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSR- 67

Query:    68 ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
              SLP     ++ +I  L L+GS + I G+ GI YS+PTLAS I N+ P  TFILAIIFRM
Sbjct:    68 -SLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRM 126

Query:   128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWT--P-QSTRSRW 184
             E  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P   L     P  S+ S W
Sbjct:   127 EKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDW 186

Query:   185 VXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLS 243
             +              V +I+Q    MKLYPA F V+  Y L A+I+++ I  V E +N S
Sbjct:   187 IIGGCLLAIKDTLVPVAFILQ-AHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPS 245

Query:   244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLS 303
              W +  DI L  IV    F   +  + H + +R KGPVY AIF+PLS         IFL 
Sbjct:   246 IWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLG 304

Query:   304 EALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 337
             ++ +LGS++GG++  +GFYTV+WGKA +  GK +
Sbjct:   305 DSFYLGSLVGGILISLGFYTVMWGKAKE--GKTQ 336

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 139/337 (41%), Positives = 207/337 (61%)

Query:     7 YKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRS 65
             ++  A+F TAM+A E +IVG + +FK+ATSKG++ + F+ YSY    L  LLL P +F +
Sbjct:     8 WRREAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYL---LASLLLLPSLFFT 64

Query:    66 NTA-SLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAII 124
             N + SLP     ++S+I  L  +GS + I G  GI YS+PTLAS IGN+ P  TFILA+I
Sbjct:    65 NRSRSLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVI 124

Query:   125 FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW-TP--QSTR 181
             FRME ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P  +    +P   S++
Sbjct:   125 FRMEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSK 184

Query:   182 SRWVXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-S 240
             S W+              V +I+Q T  M+ YP  F V++LY L  +I+++ I  V E +
Sbjct:   185 SDWLIGGAILTIQGIFVSVSFILQ-THIMREYPEAFTVSILYILCISIVTSMIGLVVEKN 243

Query:   241 NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFI 300
             N S W +  DI L +IV +     S   V+H++ +R K P+Y AIFKPLS         I
Sbjct:   244 NPSIWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTI 302

Query:   301 FLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 337
             FL+++L+LG +IGG++  +GFY V+WGKAN+E  KNK
Sbjct:   303 FLNDSLYLGCLIGGILITLGFYVVMWGKANEE--KNK 337

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 117/292 (40%), Positives = 173/292 (59%)

Query:    43 FVFYSYAATTLVLLLLFPFIFRS-NTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAY 101
             FV   Y+ T   LLLL P  F S  + SLP   F ++  +  L L+ S F+ILGY GI Y
Sbjct:    42 FVVLVYSYTFGSLLLL-PLTFFSFRSRSLPPLTFSILCNMGILGLIASAFQILGYNGIKY 100

Query:   102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT 161
             SSPTL+S + N+ P FTFILA++FRMEN++L   S+ AK++GT++S+ GA++V LY GP 
Sbjct:   101 SSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKSSVAKVLGTILSIIGALVVTLYHGPM 160

Query:   162 IMSTASIPAQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTL 221
             +MS+        H       S W+              V Y++    TM  YP+  VVTL
Sbjct:   161 LMSS--------H-------SDWIIGGGLLALQYILVSVSYLVM-AHTMGRYPSAVVVTL 204

Query:   222 LYCLFATIISAPICFVGES-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGP 280
             ++ +   ++ A +  + E  N  AW ++ DI L ++V +      +  V+HT+ +  KGP
Sbjct:   205 VHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSGYY-VIHTWAVSHKGP 263

Query:   281 VYTAIFKPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 332
             VY ++FKPLS      ++FIFL E+L+LGSV+GG++  +GFY VLWGKA ++
Sbjct:   264 VYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILISIGFYMVLWGKAKED 315

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2020688 UMAMIT36 "AT1G70260" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 112/335 (33%), Positives = 167/335 (49%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLP 71
             F AM   E   +   I+ K A + GMS FVFV Y+ A  + +LLL F F+F R+      
Sbjct:    13 FVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGS-ILLLPFSFLFHRNERTEQS 71

Query:    72 LFKFPVISRICFLSLVGSF-FRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENL 130
             +F +P++ R+ FL   G F F+ L + G+ +SSP +   +G   P F+F+L+II     L
Sbjct:    72 IFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIILGRSKL 131

Query:   131 ALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI-PAQSLHWTPQ-----STRSRW 184
                + ST AK++GT+VS+SGA +  LYKGP I   +S  P + L   P+     +    W
Sbjct:   132 DWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLVYYNLPDNW 191

Query:   185 VXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSA 244
                            ++ ++Q T T+K YP    V   Y +  TI         E +LSA
Sbjct:   192 FLGCIFLAVAVFSVSLFNVVQ-TGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDLSA 250

Query:   245 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSE 304
             W+++P+ +L  I+ +  FG    T VH    +MKGP Y  +FKP            F   
Sbjct:   251 WKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFFVN 310

Query:   305 ALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS 339
             +LH GSV+G  I  VG++TV WG+  +   K   +
Sbjct:   311 SLHYGSVLGAAIAGVGYFTVSWGQLKESEEKQSSN 345

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 111/349 (31%), Positives = 169/349 (48%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             + AM++ +    G  II  ++   GM+++V   Y +A  T V+    PF         P 
Sbjct:    12 YLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIA---PFALFHERKIRPK 68

Query:    73 FKFPVISRICFLSLVGSFF-RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLA 131
               F +  +I  L  +     + L Y G+ Y+S T AS   N+ P  TF+LAIIFR+E++ 
Sbjct:    69 MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVN 128

Query:   132 LSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM--------STASIPAQSLHWTPQSTR-- 181
                + + AK++GT+++VSGA+L+ LYKGP +            S  A   H    +    
Sbjct:   129 FKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMD 188

Query:   182 SRWVXXXXXXXXXXXXXXVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN 241
               W+               ++I+Q   T+K YPAE  +T L CL  T+    +  V   +
Sbjct:   189 KHWIPGTLMLLGRTFGWAGFFILQSF-TLKQYPAELSLTTLICLMGTLEGTAVSLVTVRD 247

Query:   242 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIF 301
             LSAW++  D  L +  YS          V    +R +GPV+ A F PL          + 
Sbjct:   248 LSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVV 307

Query:   302 LSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS-CK-IPLLQSP 348
             LSE++HLGSVIG +   VG YTV+WGK  D+   + D  CK +P+ +SP
Sbjct:   308 LSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCKGLPI-KSP 355

GO:0016020 "membrane" evidence=IEA;ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.5443	0.9482	0.8967	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G40240	nodulin MtN21 family protein; nodulin MtN21 family protein; FUNCTIONS IN- molecular_function unknown; LOCATED IN- membrane; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF6, transmembrane (InterPro-IPR000620); BEST Arabidopsis thaliana protein match is- nodulin-related (TAIR-AT5G40230.1); Has 1618 Blast hits to 1607 proteins in 311 species- Archae - 15; Bacteria - 735; Metazoa - 4; Fungi - 9; Plants - 626; Viruses - 0; Other Eukaryotes - 229 (source- NCBI BLink). (368 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G35737	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (123 aa)							•		0.919
	AT4G25315	Expressed protein; Expressed protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- bi [...] (127 aa)							•		0.919
	AT4G01000	ubiquitin family protein; ubiquitin family protein; FUNCTIONS IN- molecular_function unknown; I [...] (415 aa)							•		0.919
	PER51	peroxidase, putative; peroxidase, putative; FUNCTIONS IN- electron carrier activity, peroxidase [...] (329 aa)							•		0.879
	AT3G21465	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (388 aa)							•		0.871
	AT5G04895	ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid bind [...] (1161 aa)							•		0.871
	AT1G14880	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (151 aa)							•		0.788
	ACR8	ACR8; amino acid binding; ACR8; FUNCTIONS IN- amino acid binding; INVOLVED IN- response to absc [...] (441 aa)							•		0.788
	AAE18	AAE18 (ACYL-ACTIVATING ENZYME 18); catalytic/ ligase; Encodes a protein with similarity to acyl [...] (727 aa)							•		0.788
	AT1G25370	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (263 aa)							•		0.659

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	348
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	4e-79

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  246 bits (628), Expect = 4e-79
 Identities = 144/332 (43%), Positives = 210/332 (63%), Gaps = 8/332 (2%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E ++VG + +FK+ATSKG++ + F+ YSY   +L+LL    F  RS  
Sbjct: 10  REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR- 68

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L  +GS + I GY GI YS+PTLAS I N+TP  TFILAIIFRM
Sbjct: 69  -SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP---QSTRSRW 184
           E ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +         S+ S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLS 243
           +IGG LL I  + +SV +I+ Q   M  YPA F V+ LY +  +I+++ I  V E +N S
Sbjct: 188 LIGGALLTIQGIFVSVSFIL-QAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246

Query: 244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLS 303
            W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA +   IFL+
Sbjct: 247 VWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 305

Query: 304 EALHLGSVIGGVITCVGFYTVLWGKANDEAGK 335
           ++L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 306 DSLYLGCLIGGILITLGFYAVMWGKANEEKDQ 337

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	348
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	99.98
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.87
KOG2765	416	consensus Predicted membrane protein [Function unk	99.85
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.77
COG2510	140	Predicted membrane protein [Function unknown]	99.66
KOG2766	336	consensus Predicted membrane protein [Function unk	99.6
COG2510	140	Predicted membrane protein [Function unknown]	99.58
KOG1580	337	consensus UDP-galactose transporter related protei	99.53
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.51
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.51
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.49
KOG1581	327	consensus UDP-galactose transporter related protei	99.45
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.44
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.44
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.42
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.42
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.22
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.14
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.12
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.1
PRK15430	296	putative chloramphenical resistance permease RarD;	99.04
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.03
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.03
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.02
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.96
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.94
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.94
KOG1582	367	consensus UDP-galactose transporter related protei	98.92
PRK11272	292	putative DMT superfamily transporter inner membran	98.91
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.89
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.86
PRK11689	295	aromatic amino acid exporter; Provisional	98.84
PLN00411	358	nodulin MtN21 family protein; Provisional	98.81
PRK13499	345	rhamnose-proton symporter; Provisional	98.8
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.67
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.65
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.61
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.61
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.6
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.51
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.47
COG2962	293	RarD Predicted permeases [General function predict	98.41
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.37
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.34
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.26
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.25
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.22
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.21
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.08
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.03
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.99
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.97
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.85
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.78
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.62
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.62
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.57
PRK11431	105	multidrug efflux system protein; Provisional	97.56
COG2076	106	EmrE Membrane transporters of cations and cationic	97.54
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.5
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.49
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.37
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.28
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.23
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.23
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.14
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.11
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.09
COG2076	106	EmrE Membrane transporters of cations and cationic	97.09
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.02
PRK13499	345	rhamnose-proton symporter; Provisional	96.99
PRK11431	105	multidrug efflux system protein; Provisional	96.96
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.89
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.83
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.73
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.29
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.1
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.09
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.91
KOG2765	416	consensus Predicted membrane protein [Function unk	95.86
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.41
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.08
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.2
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.89
KOG1580	337	consensus UDP-galactose transporter related protei	93.28
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.14
KOG1581	327	consensus UDP-galactose transporter related protei	92.73
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	89.83
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.55
KOG3912	372	consensus Predicted integral membrane protein [Gen	86.21
KOG1443	349	consensus Predicted integral membrane protein [Fun	84.25
PRK02237	109	hypothetical protein; Provisional	83.27

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1e-39  Score=302.18  Aligned_cols=336  Identities=44%  Similarity=0.748  Sum_probs=262.3

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS   85 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g   85 (348)
                      +|+.+++..|+...+.+++..++.|.+++.+++|..+.++|+.++.++++++ ++.+ |+  ++.++.+++++..+.+.|
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~-~~~~~~~--~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPS-LFFTNRS--RSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHH-HHHHHHh--cccCcchHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999999999988 7764 33  222445678889999999


Q ss_pred             HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST  165 (348)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~  165 (348)
                      +++..++.+++.|++|+++++++++.+++|+++.+++++++.|+.+.++|.++.+++|+++++.|+.++...+++.....
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            99877788999999999999999999999999999999996555555555688899999999999988773333211100


Q ss_pred             CCC-cccc-CCCC-CCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccC-C
Q 018934          166 ASI-PAQS-LHWT-PQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGES-N  241 (348)
Q Consensus       166 ~~~-~~~~-~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  241 (348)
                      +++ ..+. ++.. ...+..++..|+.+++.++++||.|++++ |+..+++++....+.+++..+.+...+.....++ +
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~-~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~  244 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQ-AHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN  244 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            000 0000 0000 11223456779999999999999999999 9998898755666777777776666655555543 2


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934          242 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF  321 (348)
Q Consensus       242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~  321 (348)
                      ...|....+.....+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+
T Consensus       245 ~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv  323 (358)
T PLN00411        245 PSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF  323 (358)
T ss_pred             cccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence            233322233344557777775 5689999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheeccccccccCC---CCCCCCCCCCC
Q 018934          322 YTVLWGKANDEAGKN---KDSCKIPLLQS  347 (348)
Q Consensus       322 ~l~~~~~~~~~~~~~---~~~~~~p~l~~  347 (348)
                      ++..+.++||.+.++   +++|+.|++-+
T Consensus       324 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (358)
T PLN00411        324 YAVMWGKANEEKDQLLSFSGKEKTPLLLN  352 (358)
T ss_pred             HHHHhhhhhhhhhcccCccccccchhhhh
Confidence            999987777665555   33556666543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=3.4e-32  Score=247.74  Aligned_cols=279  Identities=14%  Similarity=0.115  Sum_probs=229.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-H
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-S   89 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   89 (348)
                      .-.+..+...++||.++++.|... ++++|.+++++|+..+.++++++ ...+|+  +   ..++++++.....|.++ .
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~-~~~~~~--~---~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAF-LLLRGH--P---LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHH-HHHhCC--C---CCcHHHHHHHHHHHHHHHH
Confidence            344557778999999999999996 79999999999999999998888 654322  2   23456788888889887 7


Q ss_pred             HHHHHHHHhh-cccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCC
Q 018934           90 FFRILGYTGI-AYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI  168 (348)
Q Consensus        90 ~~~~~~~~al-~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~  168 (348)
                      .++.+++.+. +++++++++++.+++|+++.+++++ +|||+      +++++.|+++++.|+.++. .+++        
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~------~~~~~~~~~la~~Gv~ll~-~~~~--------  144 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRT------RKLEWLGIAIGLAGIVLLN-SGGN--------  144 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccC------chhHHHHHHHHHHhHHHHh-cCcc--------
Confidence            7888999999 9999999999999999999999986 69999      6669999999999998775 1110        


Q ss_pred             ccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC
Q 018934          169 PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK  248 (348)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (348)
                                  .+....|+.++++++++||.|.+.. |+..++.  +.....+.+..+++.+.+.....+.+...  ..
T Consensus       145 ------------~~~~~~G~l~~l~a~~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  207 (292)
T PRK11272        145 ------------LSGNPWGAILILIASASWAFGSVWS-SRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTA--LP  207 (292)
T ss_pred             ------------cccchHHHHHHHHHHHHHHHHHHHH-HhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence                        0122469999999999999999999 8865432  44566777778888777776654432211  12


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934          249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      +...|..+++.+++++++++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.+
T Consensus       208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999998887644


Q ss_pred             c
Q 018934          329 A  329 (348)
Q Consensus       329 ~  329 (348)
                      +
T Consensus       288 ~  288 (292)
T PRK11272        288 Y  288 (292)
T ss_pred             h
Confidence            4

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=3.1e-32  Score=248.30  Aligned_cols=284  Identities=12%  Similarity=0.078  Sum_probs=213.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (348)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (348)
                      +.++.++++.+.++||.+++..|..+ ++++|..+.++|+.++.+++.++ ..  ++  +    .+++.++. .+.+.++
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~-~~--~~--~----~~~~~~~~-~~~~~l~   70 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLT-VG--FP--R----LRQFPKRY-LLAGGLL   70 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHH-cc--cc--c----cccccHHH-HHHHhHH
Confidence            45678889999999999999999996 88999999999999999888766 32  11  1    11112223 3344445


Q ss_pred             -HHHHHHHHHhhcc----cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934           89 -SFFRILGYTGIAY----SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM  163 (348)
Q Consensus        89 -~~~~~~~~~al~~----~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~  163 (348)
                       ..+..+++.+++|    .++++++++.+++|+++.+++++++|||+      ++.++.|+++++.|+.++. .+++.. 
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~------~~~~~~g~~l~~~Gv~li~-~~~~~~-  142 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKA------NWLLIPGLLLALAGVAWVL-GGDNGL-  142 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCc------cHHHHHHHHHHHHhHhhee-cCCccc-
Confidence             7888888888764    57788899999999999999999999999      6669999999999998887 221100 


Q ss_pred             CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018934          164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLS  243 (348)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                      ..        ++. ..+..+...|+.++++++++||.|+++. |+..++.+ +.....   ..+.+.+.+.....+... 
T Consensus       143 ~~--------~~~-~~~~~~~~~G~~~~l~aa~~~A~~~v~~-k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~-  207 (295)
T PRK11689        143 SL--------AEL-INNIASNPLSYGLAFIGAFIWAAYCNVT-RKYARGKN-GITLFF---ILTALALWIKYFLSPQPA-  207 (295)
T ss_pred             hh--------hhh-hhccccChHHHHHHHHHHHHHHHHHHHH-hhccCCCC-chhHHH---HHHHHHHHHHHHHhcCcc-
Confidence            00        000 0001122469999999999999999999 88877766 554422   223333333333332211 


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934          244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  323 (348)
Q Consensus       244 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l  323 (348)
                       .. .+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus       208 -~~-~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~  284 (295)
T PRK11689        208 -MV-FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL  284 (295)
T ss_pred             -cc-CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence             11 13346777777774 8999999999999999999999999999999999999999999999999999999999888


Q ss_pred             heeccc
Q 018934          324 VLWGKA  329 (348)
Q Consensus       324 ~~~~~~  329 (348)
                      ..+.++
T Consensus       285 ~~~~~~  290 (295)
T PRK11689        285 CWLATR  290 (295)
T ss_pred             HhhhHh
Confidence            866444

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=9.5e-32  Score=245.66  Aligned_cols=278  Identities=13%  Similarity=0.108  Sum_probs=216.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHH
Q 018934           13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFF   91 (348)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   91 (348)
                      .+..++++++||.++++.|..+ ++++|.++.++|+.++.+.++++ ..  ++  +    .++   +.....|++. ...
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~-~~--~~--~----~~~---~~~~~~g~~~~~~~   72 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFF-VA--RP--K----VPL---NLLLGYGLTISFGQ   72 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHH-hc--CC--C----Cch---HHHHHHHHHHHHHH
Confidence            4668889999999999999996 78999999999999987766554 32  22  1    122   2344456655 556


Q ss_pred             HHHHHHhhcc-cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934           92 RILGYTGIAY-SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA  170 (348)
Q Consensus        92 ~~~~~~al~~-~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~  170 (348)
                      ..+++.+++| .++++++++.+++|+++.+++++++|||+      ++.+++|+++++.|+.++. .++.          
T Consensus        73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~------~~~~~~~~~l~~~Gv~ll~-~~~~----------  135 (299)
T PRK11453         73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERL------QGKQLAGIALAIFGVLVLI-EDSL----------  135 (299)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHhHHHhc-cccC----------
Confidence            6678889998 58899999999999999999999999999      5669999999999998887 2110          


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCc--hHHHHHHHHHHHHHHHHHHHHhccCCc---ccc
Q 018934          171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPA--EFVVTLLYCLFATIISAPICFVGESNL---SAW  245 (348)
Q Consensus       171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  245 (348)
                              .+.+....|+.+++.++++||.|.+.+ |+..++.++  ......+.+..+.+.........+.+.   ..+
T Consensus       136 --------~~~~~~~~G~~l~l~aal~~a~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (299)
T PRK11453        136 --------NGQHVAMLGFMLTLAAAFSWACGNIFN-KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL  206 (299)
T ss_pred             --------CCcchhHHHHHHHHHHHHHHHHHHHHH-HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence                    011223469999999999999999999 887666542  234445555555444444333333321   111


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          246 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      ...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|+++..
T Consensus       207 ~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        207 VTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence            12234578999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             eccc
Q 018934          326 WGKA  329 (348)
Q Consensus       326 ~~~~  329 (348)
                      ++++
T Consensus       287 ~~~~  290 (299)
T PRK11453        287 FGLR  290 (299)
T ss_pred             cchh
Confidence            7655

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=3.8e-31  Score=240.92  Aligned_cols=279  Identities=14%  Similarity=0.051  Sum_probs=223.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (348)
                      .++.+++.+++++.++|+.++.+.|.++ ++.+|.++.++|+.++.++++++ ... ++     .+.++++++..+..|+
T Consensus         8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~-~~~-~~-----~~~~~~~~~~~~~~g~   79 (293)
T PRK10532          8 LPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAI-FKP-WR-----LRFAKEQRLPLLFYGV   79 (293)
T ss_pred             cccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHH-HhH-Hh-----ccCCHHHHHHHHHHHH
Confidence            4568899999999999999999999997 67999999999999999888776 432 22     1235667888888998


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      +.+..+.++++++++++++.++++..++|+++.+++.    ||+      +  +..++.+++.|+.++. ..+..     
T Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~------~--~~~~~~i~~~Gv~li~-~~~~~-----  141 (293)
T PRK10532         80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP------V--DFVWVVLAVLGLWFLL-PLGQD-----  141 (293)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh------H--HHHHHHHHHHHHheee-ecCCC-----
Confidence            8888889999999999999999999999999988762    433      2  3456778899998876 22110     


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR  246 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (348)
                                   ..+....|++++++++++||.|.+.. |+..++.+ +.... +....+++.+.|.....+.. ..+ 
T Consensus       142 -------------~~~~~~~G~ll~l~aa~~~a~~~v~~-r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~-  203 (293)
T PRK10532        142 -------------VSHVDLTGAALALGAGACWAIYILSG-QRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGE-ALW-  203 (293)
T ss_pred             -------------cccCChHHHHHHHHHHHHHHHHHHHH-HHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCc-ccC-
Confidence                         01123469999999999999999999 88877776 55554 45566666666765543321 111 


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          247 LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                        +...+...++++++++.++|.+|++++++.++++++.+.++||+++.+++++++||++++.+++|+++|++|+....+
T Consensus       204 --~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        204 --HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence              223566678999999999999999999999999999999999999999999999999999999999999999888876


Q ss_pred             ccccc
Q 018934          327 GKAND  331 (348)
Q Consensus       327 ~~~~~  331 (348)
                      ..++|
T Consensus       282 ~~~~~  286 (293)
T PRK10532        282 TIRRE  286 (293)
T ss_pred             cCCCC
Confidence            55443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.98  E-value=2e-30  Score=236.51  Aligned_cols=279  Identities=13%  Similarity=0.045  Sum_probs=207.0

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-C-CCchhHHHHHH
Q 018934            5 NSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASL-P-LFKFPVISRIC   82 (348)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~   82 (348)
                      |++++.++++++++++++|+.+++..|..  ++++|.++.++|+.++.+++.++ ...+++ ++.. + .++++++....
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~   77 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVL-MSICRQ-WSYLKTLIQTPQKIFMLA   77 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH-HHHHcc-HHHHHHHHcCHHHHHHHH
Confidence            44678899999999999999999999976  57999999999999999888777 554321 0110 0 11334333333


Q ss_pred             HHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcc
Q 018934           83 FLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT  161 (348)
Q Consensus        83 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~  161 (348)
                       .+.++ +.++.++++|++++++++++++.++.|+++.+++++++|||+      ++.++.|+++++.|+.++. ...  
T Consensus        78 -~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~------~~~~~~g~~l~~~Gv~li~-~~~--  147 (296)
T PRK15430         78 -VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF------RRMQWLAVILAICGVLVQL-WTF--  147 (296)
T ss_pred             -HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC------cHHHHHHHHHHHHHHHHHH-HHc--
Confidence             55555 889999999999999999999999999999999999999999      6669999999999998876 110  


Q ss_pred             ccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccC
Q 018934          162 IMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGES  240 (348)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                                         .+.    ..++++++++||.|.+.. |+..++.. +......+....+.....+.   .+.
T Consensus       148 -------------------~~~----~~~~l~aa~~~a~~~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  200 (296)
T PRK15430        148 -------------------GSL----PIIALGLAFSFAFYGLVR-KKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADS  200 (296)
T ss_pred             -------------------CCc----cHHHHHHHHHHHHHHHHH-HhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccC
Confidence                               000    146888999999999999 77654322 22333444444444332221   111


Q ss_pred             CccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHh
Q 018934          241 NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVG  320 (348)
Q Consensus       241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g  320 (348)
                      ....+...+...+..+.+.++ ++.++|.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|+.|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~  279 (296)
T PRK15430        201 STSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVA  279 (296)
T ss_pred             CcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            111111111112333344454 7789999999999999999999999999999999999999999999999999999888


Q ss_pred             hhhhe
Q 018934          321 FYTVL  325 (348)
Q Consensus       321 ~~l~~  325 (348)
                      +.+..
T Consensus       280 ~~v~~  284 (296)
T PRK15430        280 LAIFV  284 (296)
T ss_pred             HHHHH
Confidence            66665

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=6e-30  Score=229.39  Aligned_cols=257  Identities=18%  Similarity=0.230  Sum_probs=216.9

Q ss_pred             HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 018934           23 IVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAY  101 (348)
Q Consensus        23 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~  101 (348)
                      ||.+++..|..++++.++.+..+.|...+.+++.++ ... +        .++++++.....|.++ .+++.+++.|++|
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~-~~~-~--------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL-LRR-R--------PPLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHh-c--------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999998778999999999999988887766 432 1        2344566777888777 9999999999999


Q ss_pred             cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCC
Q 018934          102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTR  181 (348)
Q Consensus       102 ~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~  181 (348)
                      +++++++++.+++|+++.+++++++|||+      +++++.|++++++|+.++. .+++                    .
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~------~~~~~~gi~i~~~Gv~li~-~~~~--------------------~  123 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERP------RKLVLLAAVLGLAGAVLLL-SDGN--------------------L  123 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHhhc-cCCc--------------------c
Confidence            99999999999999999999999999999      5569999999999998876 2211                    1


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHH
Q 018934          182 SRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSA  260 (348)
Q Consensus       182 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  260 (348)
                      +....|+.+++.++++|+.+.+.. |+..++.+ ++.....+.+..+.+++.+.....+++. ..   +...+..+++.+
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~-k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~  198 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLY-KRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG  198 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHH-hHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence            234579999999999999999999 99887766 2345555778888888888766644322 11   345777889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF  321 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~  321 (348)
                      ++++++++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.4e-29  Score=231.85  Aligned_cols=286  Identities=15%  Similarity=0.078  Sum_probs=220.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 018934           13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR   92 (348)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   92 (348)
                      ........++-....+.+|.++++...|..+++.|+..+.+...+. .....+  ++ ++.++++++.++..|++.+.+.
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~~~~~~~~g~~~~~~~   79 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLP--KR-LKISSALLKLLLPVAIVHTIGH   79 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCHHHHHHHHHHHHHHHHHH
Confidence            4455566666666778899998544779999999999887765544 222112  22 4467889999999999998889


Q ss_pred             HHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcccc
Q 018934           93 ILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQS  172 (348)
Q Consensus        93 ~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~  172 (348)
                      .+.+.+++|++++.++++.++.|+++++++++++|||+      ++.++.|+++++.|+.+..  .++            
T Consensus        80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~------~~~~~~~l~l~~~Gv~l~~--~~~------------  139 (302)
T TIGR00817        80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF------PSTLWLSLLPIVGGVALAS--DTE------------  139 (302)
T ss_pred             HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHhhhc--CCc------------
Confidence            99999999999999999999999999999999999999      5559999999999997653  111            


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhh--cCCchHHHHHHHHHHHHHHHHHHHHhccCCcc---cccc
Q 018934          173 LHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESNLS---AWRL  247 (348)
Q Consensus       173 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  247 (348)
                              .+....|+.++++++++||+|.+.. |+..+  +.+ +.+...+++..+++.+.|.....++...   .+..
T Consensus       140 --------~~~~~~G~~~~l~a~~~~a~~~v~~-k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~  209 (302)
T TIGR00817       140 --------LSFNWAGFLSAMISNITFVSRNIFS-KKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ  209 (302)
T ss_pred             --------ccccHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence                    1223569999999999999999999 88877  555 8899999999999999998776553210   0100


Q ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934          248 -----KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY  322 (348)
Q Consensus       248 -----~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~  322 (348)
                           .....+...+..++.+....+.++++++++.+|++.++..+++|+++++++++++||++++.+++|+++++.|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~  289 (302)
T TIGR00817       210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF  289 (302)
T ss_pred             hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence                 001112112233332333333566689999999999999999999999999999999999999999999999999


Q ss_pred             hheecccccc
Q 018934          323 TVLWGKANDE  332 (348)
Q Consensus       323 l~~~~~~~~~  332 (348)
                      ++.+.|++|+
T Consensus       290 l~~~~k~~~~  299 (302)
T TIGR00817       290 LYSRVKAQKP  299 (302)
T ss_pred             HHHHHhccCc
Confidence            9987554443

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=2.2e-26  Score=209.03  Aligned_cols=298  Identities=18%  Similarity=0.211  Sum_probs=233.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      +..+.-=..+++-.++...+....+.+.+ |....++-+..-.++..++ ..++ ++++.+....+++++++++.+++..
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~-~~~r-~~~~~~~~~~~~~~w~y~lla~~Dv   90 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPI-LLYR-RGFKKWLKVLKRPWWKYFLLALLDV   90 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhh-hhhc-cccccchhhcchhHHHHHHHHHHHH
Confidence            33333444566777777777777545554 6667777777766666666 5554 2112223444567899999999999


Q ss_pred             HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCc
Q 018934           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP  169 (348)
Q Consensus        90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~  169 (348)
                      .++++.+.|++|++.+.++++..+.-.++++++++++|||.      ++.+++|+++++.|++++...+...        
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry------~~~~~~gv~i~i~Gv~lv~~sD~~~--------  156 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRY------SWFHILGVLICIAGVVLVVVSDVLS--------  156 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhh------hHHHHHHHHHHHhhhhheeeecccc--------
Confidence            99999999999999999999999999999999999999999      6669999999999999888422211        


Q ss_pred             cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCC
Q 018934          170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP  249 (348)
Q Consensus       170 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (348)
                           ++++.+.++...|+++++.+++.||.++++. ++..|+.+ ..+..+...+++.++..+...+.|.+... ...+
T Consensus       157 -----~~~~~~~~~~i~GDll~l~~a~lya~~nV~~-E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~-~~~w  228 (334)
T PF06027_consen  157 -----GSDSSSGSNPILGDLLALLGAILYAVSNVLE-EKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIE-SIHW  228 (334)
T ss_pred             -----cccCCCCCccchhHHHHHHHHHHHHHHHHHH-HHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhh-ccCC
Confidence                 1112234567889999999999999999999 99999988 88899999999999999888888775322 1112


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          250 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      +...........++...-|.+....++..+|+..++-..+..+++.+++++++|+.+++..++|.++|+.|.+++...++
T Consensus       229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            33333344444557777888888999999999999999999999999999999999999999999999999999987655


Q ss_pred             ccc
Q 018934          330 NDE  332 (348)
Q Consensus       330 ~~~  332 (348)
                      +++
T Consensus       309 ~~~  311 (334)
T PF06027_consen  309 PEE  311 (334)
T ss_pred             ccc
Confidence            443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=5.5e-27  Score=212.43  Aligned_cols=274  Identities=12%  Similarity=0.050  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934           13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGSFF   91 (348)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (348)
                      .+..++++++|+......|... +..++  ..+++...+.+.+.++ ...+ ++  ..++..+++.+......+..+..+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPY-GLWYLAQ--VGWSRLPATFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHH-HHHhccc--CCCCCcchhhHHHHHHHHHHHHHH
Confidence            4567889999999999999774 44444  3477777777777777 6553 12  221333444444555555555999


Q ss_pred             HHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccc
Q 018934           92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ  171 (348)
Q Consensus        92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~  171 (348)
                      ..+++.+++++++++++++.+++|+++.+++++++|||+      +++++.|+++++.|+.++. .++.           
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~------~~~~~~g~~~~~~Gv~ll~-~~~~-----------  138 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETL------SPLAWLGILIITLGLLVLG-LSRF-----------  138 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHh-cccc-----------
Confidence            999999999999999999999999999999999999999      6669999999999998876 2111           


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCch---HHHHHHHHHHHHHHHHHHHHhccCCccccccC
Q 018934          172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAE---FVVTLLYCLFATIISAPICFVGESNLSAWRLK  248 (348)
Q Consensus       172 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (348)
                               ......|+.+++.++++|+.|.+.. |+..++.++.   .....+.....++...+.....+...  +. .
T Consensus       139 ---------~~~~~~g~~~~l~aal~~a~~~i~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~  205 (281)
T TIGR03340       139 ---------AQHRRKAYAWALAAALGTAIYSLSD-KAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-P  205 (281)
T ss_pred             ---------cccchhHHHHHHHHHHHHHHhhhhc-cccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-h
Confidence                     0112347889999999999999998 7765554411   11222222222121122111112111  11 1


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934          249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  323 (348)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l  323 (348)
                      ++..+...++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+++
T Consensus       206 ~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       206 YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            223456777888889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=2.3e-26  Score=213.94  Aligned_cols=284  Identities=17%  Similarity=0.113  Sum_probs=225.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC--chhHHHHHHHHH
Q 018934            9 NGALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF--KFPVISRICFLS   85 (348)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g   85 (348)
                      +.+...+++....+-......+|.++ +.++ |..++.+|++.+.++...+ .....+  ++ ++.  .+++++.++..|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~--~~-~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLY-WATGFR--KI-PRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCCHHHHHHHHHHHH
Confidence            56777778888888888889999998 6688 9999999999998876544 333211  11 222  345788999999


Q ss_pred             HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST  165 (348)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~  165 (348)
                      +++...+...+.|+++++++.++++..+.|+++++++++++|||+      +++++.++++++.|+.+.. . ++     
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~------s~~~~l~l~l~v~Gv~l~~-~-~~-----  188 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL------NLYAYLSLIPIVGGVALAS-V-KE-----  188 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHhee-c-cc-----
Confidence            999666777889999999999999999999999999999999999      5669999999999999987 1 11     


Q ss_pred             CCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC------chHHHHHHHHHHHHHHHHHHHHhcc
Q 018934          166 ASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP------AEFVVTLLYCLFATIISAPICFVGE  239 (348)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                                     .+....|++++++++++||++++.. |+..++.+      ++.+...+....++++++|+....|
T Consensus       189 ---------------~~~~~~G~~~~l~s~~~~a~~~i~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        189 ---------------LHFTWLAFWCAMLSNLGSSLRSIFA-KKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                           1224579999999999999999999 88876542      2556666778889999999877665


Q ss_pred             CCc--cccc----cCCchhHHHHHHHHHHHHHHHHHHHHH----hhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhh
Q 018934          240 SNL--SAWR----LKPDIELASIVYSAFFGLSFITVVHTF----GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG  309 (348)
Q Consensus       240 ~~~--~~~~----~~~~~~~~~~l~~~~~~~~~~~~l~~~----a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~  309 (348)
                      ...  ..+.    ......+..+++ .++.+++++.+|+.    ++++++|...++..+++|+++++++++++||++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        253 GKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             hHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            421  1110    001112233444 45577899999995    999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHhhhhheec
Q 018934          310 SVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       310 ~~iG~~li~~g~~l~~~~  327 (348)
                      +++|+++++.|++++.+-
T Consensus       332 ~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        332 GYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHHHHHHHHHHHHHHhhc
Confidence            999999999999988754

>TIGR00688 rarD rarD protein

Probab=99.94  E-value=5e-25  Score=197.05  Aligned_cols=250  Identities=12%  Similarity=0.007  Sum_probs=182.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCCCchh-HHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT---ASLPLFKFP-VISRICFLSL   86 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~g~   86 (348)
                      |+++++++++++||.++++.|..  ++++|.+++++|+.++.+++.++ ...+++.+   ++.++.+++ .+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLS-VTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHH-HHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            58899999999999999999984  56999999999999999888776 54432100   010111222 3445777888


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      +.+.++.+++.|++++++++++++.++.|+++++++++++|||+      +++++.++++++.|++++. .. +      
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~------~~~~~l~~~~~~~Gv~li~-~~-~------  144 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERI------SRFQFIAVIIATLGVISNI-VL-K------  144 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHH-HH-c------
Confidence            78999999999999999999999999999999999999999999      6669999999999998775 11 0      


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR  246 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (348)
                                    .+.    ..+++.++++||.|.+.. |+..++ + ....... .........+.....+.... ..
T Consensus       145 --------------~~~----~~~~l~aa~~~a~~~i~~-~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~  201 (256)
T TIGR00688       145 --------------GSL----PWEALVLAFSFTAYGLIR-KALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDFATV-QQ  201 (256)
T ss_pred             --------------CCc----hHHHHHHHHHHHHHHHHH-hhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhccCcc-cc
Confidence                          000    135788999999999999 776543 2 2221111 11111121111111111110 11


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHH
Q 018934          247 LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  301 (348)
Q Consensus       247 ~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~  301 (348)
                      ..+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++++.
T Consensus       202 ~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       202 TNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            1122478888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=8.1e-23  Score=185.60  Aligned_cols=282  Identities=21%  Similarity=0.261  Sum_probs=214.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKG-MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS   85 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   85 (348)
                      ++........+...+.|+.+....|... ++ .++....+.|...+.+...+. ....+.  .+ .+..+ .++...+.+
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~-~~~~~~~~~   76 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPL-LLLEPR--GL-RPALR-PWLLLLLLA   76 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHH-HHhhcc--cc-ccccc-chHHHHHHH
Confidence            3456678888889999999999999996 54 777777777999888884433 222111  11 11111 144555555


Q ss_pred             HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHH-HHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934           86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI-IFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM  163 (348)
Q Consensus        86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~  163 (348)
                      .+. ..+..+++.++++++++.++++.++.|+++.++++ +++|||+      ++.++.++++++.|++++.. .+... 
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~Gv~lv~~-~~~~~-  148 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL------SLLQILGILLALAGVLLILL-GGGGG-  148 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHheec-CCCcc-
Confidence            555 99999999999999999999999999999999997 7779999      66699999999999999982 11100 


Q ss_pred             CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHH-HHHHHHHHHHHHHHHhccCCc
Q 018934          164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTL-LYCLFATIISAPICFVGESNL  242 (348)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (348)
                                      ... ...|+.+++.++++||.+.+.. |+.. +.+ +..... +..........+. ...+.+ 
T Consensus       149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~-  206 (292)
T COG0697         149 ----------------GIL-SLLGLLLALAAALLWALYTALV-KRLS-RLG-PVTLALLLQLLLALLLLLLF-FLSGFG-  206 (292)
T ss_pred             ----------------hhH-HHHHHHHHHHHHHHHHHHHHHH-HHhc-CCC-hHHHHHHHHHHHHHHHHHHH-Hhcccc-
Confidence                            001 5689999999999999999999 8777 544 444444 3333222222222 111111 


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934          243 SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY  322 (348)
Q Consensus       243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~  322 (348)
                         .......+..+.+.+++++++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.
T Consensus       207 ---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~  283 (292)
T COG0697         207 ---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL  283 (292)
T ss_pred             ---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence               11234578889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hheec
Q 018934          323 TVLWG  327 (348)
Q Consensus       323 l~~~~  327 (348)
                      +...+
T Consensus       284 l~~~~  288 (292)
T COG0697         284 LASLR  288 (292)
T ss_pred             HHhcc
Confidence            88765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=2.7e-23  Score=175.36  Aligned_cols=277  Identities=17%  Similarity=0.076  Sum_probs=229.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (348)
                      ++++++.+.+.--....+.|..+ ..+++...+.+|..++.+.++++   + |.  .+ .+.+++++..+...|..-+..
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l---~-RP--wr-~r~~~~~~~~~~~yGvsLg~M   84 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLAL---F-RP--WR-RRLSKPQRLALLAYGVSLGGM   84 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHH---h-hH--HH-hccChhhhHHHHHHHHHHHHH
Confidence            67888888887777888999998 88999999999999999888766   2 22  11 456778899999999999999


Q ss_pred             HHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccc
Q 018934           92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ  171 (348)
Q Consensus        92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~  171 (348)
                      |.+||.+++..|.+.+..+.++.|+.++.++.         |   +..+..-+.+++.|..++. ..++           
T Consensus        85 Nl~FY~si~riPlGiAVAiEF~GPL~vA~~~s---------R---r~~d~vwvaLAvlGi~lL~-p~~~-----------  140 (292)
T COG5006          85 NLLFYLSIERIPLGIAVAIEFTGPLAVALLSS---------R---RLRDFVWVALAVLGIWLLL-PLGQ-----------  140 (292)
T ss_pred             HHHHHHHHHhccchhhhhhhhccHHHHHHHhc---------c---chhhHHHHHHHHHHHHhhe-eccC-----------
Confidence            99999999999999999999999999887752         2   4457888888899988887 2221           


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCch
Q 018934          172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDI  251 (348)
Q Consensus       172 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (348)
                             +....+..|..+++.++.+|+.|.+.. +|..+..+ ...-....+.+++++..|+........    ..++.
T Consensus       141 -------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G-~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~----l~~p~  207 (292)
T COG5006         141 -------SVWSLDPVGVALALGAGACWALYIVLG-QRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPA----LFSPS  207 (292)
T ss_pred             -------CcCcCCHHHHHHHHHHhHHHHHHHHHc-chhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchh----hcChH
Confidence                   123445679999999999999999999 88887655 677888888999999999876443321    11334


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934          252 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      -...-+..+++.+.+.|.+-..++++.+....+.+..+||.++++.+++++||++++.||+|...|+.+..-..+..||+
T Consensus       208 ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         208 LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            56667788999999999999999999999999999999999999999999999999999999999999988777655554


Q ss_pred             cc
Q 018934          332 EA  333 (348)
Q Consensus       332 ~~  333 (348)
                      ..
T Consensus       288 ~~  289 (292)
T COG5006         288 AV  289 (292)
T ss_pred             CC
Confidence            43

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=7.2e-23  Score=177.47  Aligned_cols=284  Identities=10%  Similarity=0.020  Sum_probs=227.5

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCCchhHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTA-SLPLFKFPVISRICFLS   85 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g   85 (348)
                      ++..+|+++.+.+.++||..+...|..  +..++.++...|.+.+..+++.+ ....|+.++ +...++++.+..+.+.+
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~l-l~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLAL-LFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            446789999999999999999999999  78999999999999999998877 444332111 11245667788888888


Q ss_pred             HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST  165 (348)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~  165 (348)
                      .+....+..+.++.+...+-++++=++..|++.++++.+++|||+      ++.++++++++.+||.......|+.    
T Consensus        80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl------s~~Q~iAV~lA~~GV~~~~~~~g~l----  149 (293)
T COG2962          80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL------SRLQWIAVGLAAAGVLIQTWLLGSL----  149 (293)
T ss_pred             HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHcCCC----
Confidence            888999999999999999999999999999999999999999999      8889999999999998877322211    


Q ss_pred             CCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018934          166 ASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAW  245 (348)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (348)
                                            --..+.-+++|+.|-... |+..  . |+.+.....+..-........+..+...+..
T Consensus       150 ----------------------pwval~la~sf~~Ygl~R-K~~~--v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~  203 (293)
T COG2962         150 ----------------------PWVALALALSFGLYGLLR-KKLK--V-DALTGLTLETLLLLPVALIYLLFLADSGQFL  203 (293)
T ss_pred             ----------------------cHHHHHHHHHHHHHHHHH-HhcC--C-chHHhHHHHHHHHhHHHHHHHHHHhcCchhh
Confidence                                  024555677899996665 4431  2 4677777777776666666655554433211


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          246 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       246 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      ...++..+..+...|. .+.++..++..+.++.+-+..+.++|.+|..-.+++++++||+++..+++..++|.+|..++.
T Consensus       204 ~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~  282 (293)
T COG2962         204 QQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFS  282 (293)
T ss_pred             hcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            1123446666667777 778999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ecccc
Q 018934          326 WGKAN  330 (348)
Q Consensus       326 ~~~~~  330 (348)
                      .+.-+
T Consensus       283 ~d~l~  287 (293)
T COG2962         283 IDGLY  287 (293)
T ss_pred             HHHHH
Confidence            65443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.89  E-value=9.4e-24  Score=179.24  Aligned_cols=292  Identities=16%  Similarity=0.109  Sum_probs=215.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      .++.....+.. ++....++.+..+  +.+|.+..-.|+++-.+...+. ..+++.  .-  --+..+.++++++|+.+.
T Consensus        37 ~~gl~l~~vs~-ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pc-liy~~~--~v--~gp~g~R~~LiLRg~mG~  108 (346)
T KOG4510|consen   37 NLGLLLLTVSY-FFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPC-LIYYMQ--PV--IGPEGKRKWLILRGFMGF  108 (346)
T ss_pred             ccCceehhhHH-HHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheE-EEEEee--ee--ecCCCcEEEEEeehhhhh
Confidence            34444444444 4444445555553  7899999999988887777776 555433  11  122334567899999999


Q ss_pred             HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCc
Q 018934           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP  169 (348)
Q Consensus        90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~  169 (348)
                      .+..+.|++++|.+.++|+++..++|.|+.+++|+++|||.      ++...++..+.+.|+++++  +.++....+.  
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~------t~~eaL~s~itl~GVVLIv--RPpFlFG~~t--  178 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF------TKFEALGSLITLLGVVLIV--RPPFLFGDTT--  178 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC------cHHHHHHHHHhhheEEEEe--cCCcccCCCc--
Confidence            99999999999999999999999999999999999999999      8889999999999999997  4444322100  


Q ss_pred             cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC-
Q 018934          170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK-  248 (348)
Q Consensus       170 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (348)
                          ++.+.+.......|...++.++++-|-.+++. |+..|+.+ ......+...++++...+.....+    .+..+ 
T Consensus       179 ----~g~~~s~~~~~~~gt~aai~s~lf~asvyIil-R~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~  248 (346)
T KOG4510|consen  179 ----EGEDSSQVEYDIPGTVAAISSVLFGASVYIIL-RYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPH  248 (346)
T ss_pred             ----cccccccccccCCchHHHHHhHhhhhhHHHHH-HHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCc
Confidence                00001112333446788888888888888999 88888887 444444555555555444332222    12222 


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934          249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      ....|+.++.+|+ .+.+++.+...++++..+..++++.+...+++.+++++++||.|+++.|.|+++|+.+.+.....|
T Consensus       249 cgkdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  249 CGKDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             cccceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            3457778888888 556899999999999999999999999999999999999999999999999999999977665444


Q ss_pred             cc
Q 018934          329 AN  330 (348)
Q Consensus       329 ~~  330 (348)
                      ..
T Consensus       328 wa  329 (346)
T KOG4510|consen  328 WA  329 (346)
T ss_pred             Hh
Confidence            43

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.87  E-value=4.3e-20  Score=167.58  Aligned_cols=278  Identities=13%  Similarity=0.068  Sum_probs=204.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (348)
                      ++++.++++++||.+++..|...  +.++.++.  |..++.+++..+ ....|+  ++  ...++.+..-++.|++...+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~-~~~~~~--~~--~~~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIA-IAIFVL--PE--FWALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHH-HHHHhC--Cc--ccccHHHHHHHHHHHHHHhh
Confidence            46788999999999999999983  78887775  677777766655 443233  11  12245555566777777899


Q ss_pred             HHHHHHhhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934           92 RILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA  170 (348)
Q Consensus        92 ~~~~~~al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~  170 (348)
                      +.+++.+.++++.+.+..+.+ +++++..+.+.+++|||.+.++  ......|+++.+.|++++.. .++....      
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~-~~~~~~~------  143 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSR-SKDKSAG------  143 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEe-ccccccc------
Confidence            999999999999999999988 8999999999999999984431  11229999999999988872 2211000      


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHH---HHHHHHHHHHHHHHHHHhccCCcccccc
Q 018934          171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVV---TLLYCLFATIISAPICFVGESNLSAWRL  247 (348)
Q Consensus       171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (348)
                             ..+..+...|..+++.++++|+.|.+.. |..  +++ |.+.   ..+..++++.+..+..  . . ..++  
T Consensus       144 -------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~-~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~~~--  206 (290)
T TIGR00776       144 -------IKSEFNFKKGILLLLMSTIGYLVYVVVA-KAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-L-AKPL--  206 (290)
T ss_pred             -------cccccchhhHHHHHHHHHHHHHHHHHHH-HHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-c-ccch--
Confidence                   0000234669999999999999999999 765  254 6665   4444444444333322  1 1 1111  


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhh
Q 018934          248 KPDIELASIVYSAFFGLSFITVVHTFGLR-MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFY  322 (348)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~l~~~a~~-~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~  322 (348)
                      .+...+..++ .|++ .++++.+|..+.+ +.+++..+.+...+|+.+.+++++++||+.++.++    +|+++|+.|+.
T Consensus       207 ~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence            1223444444 7887 6899999999999 99999999999999999999999999999999999    99999999987


Q ss_pred             hhee
Q 018934          323 TVLW  326 (348)
Q Consensus       323 l~~~  326 (348)
                      +...
T Consensus       285 l~~~  288 (290)
T TIGR00776       285 ILGI  288 (290)
T ss_pred             HHhc
Confidence            7643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.85  E-value=2.2e-19  Score=159.84  Aligned_cols=232  Identities=19%  Similarity=0.297  Sum_probs=190.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCc
Q 018934           81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGP  160 (348)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~  160 (348)
                      .+....+.+.+++.+..|+.+++++..+++.+++-+|+.+++.++..||+      ++.|++++++.+.|++++.. ++.
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f------t~sKllav~~si~GViiVt~-~~s  234 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF------TLSKLLAVFVSIAGVIIVTM-GDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh------hHHHHHHHHHhhccEEEEEe-ccc
Confidence            33444444999999999999999999999999999999999999999999      66699999999999999984 222


Q ss_pred             cccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC---chHHHHHHHHHHHHHHHHHHHHh
Q 018934          161 TIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP---AEFVVTLLYCLFATIISAPICFV  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                      ..             +++........|+++++++++.||.|.++. |+...+.+   |.-.+.++..++..+.+.|..++
T Consensus       235 ~~-------------~~~~~a~~~llG~llaL~sA~~YavY~vll-k~~~~~eg~rvdi~lffGfvGLfnllllwP~l~i  300 (416)
T KOG2765|consen  235 KQ-------------NSDLPASRPLLGNLLALLSALLYAVYTVLL-KRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLII  300 (416)
T ss_pred             cc-------------cccCCccchhHHHHHHHHHHHHHHHHHHHH-HhhcccccccccHHHHHHHHHHHHHHHHhHHHHH
Confidence            11             112234556789999999999999999999 77766653   45566677777778888876666


Q ss_pred             ccC-CccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHH
Q 018934          238 GES-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVI  316 (348)
Q Consensus       238 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~l  316 (348)
                      .+. ..+.+..+.......++..+++.++++-++|.+|.-..++..+++-+.++.+.+++.+.++-|.++++.+++|.+.
T Consensus       301 L~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~  380 (416)
T KOG2765|consen  301 LDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIP  380 (416)
T ss_pred             HHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            433 2333455566677888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhheeccccccc
Q 018934          317 TCVGFYTVLWGKANDEA  333 (348)
Q Consensus       317 i~~g~~l~~~~~~~~~~  333 (348)
                      |++|.+.++.......+
T Consensus       381 Ifv~Fv~vn~~~~~~~~  397 (416)
T KOG2765|consen  381 IFVGFVIVNISSENSKK  397 (416)
T ss_pred             HHHHHhheecccccccc
Confidence            99999998875554433

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=4e-18  Score=156.01  Aligned_cols=267  Identities=17%  Similarity=0.193  Sum_probs=209.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHH
Q 018934           40 YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTF  119 (348)
Q Consensus        40 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~  119 (348)
                      |..+++.++....+...+. ....++     ++.++..++.+...+++..++..+.+.+++|.|.+.-.++..+.|++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm  105 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFIL-LSLFKF-----PKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM  105 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHH-HHhccc-----cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence            8899999998888877666 443231     2233445778888899999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934          120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS  199 (348)
Q Consensus       120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  199 (348)
                      +++.+++|+|.      ++.++.++++..+|+++..+.+....+.            .+.+...+..|+.+.+.+.++.|
T Consensus       106 i~~~l~~~k~y------~~~~~~~v~li~~Gv~~~~~~~~~~~~~------------~~~~~~~~~~G~~ll~~sl~~~a  167 (303)
T PF08449_consen  106 ILGVLILGKRY------SRRQYLSVLLITIGVAIFTLSDSSSSSS------------SNSSSFSSALGIILLLLSLLLDA  167 (303)
T ss_pred             HHHHHhcCccc------cHHHHHHHHHHHhhHheeeecccccccc------------cccccccchhHHHHHHHHHHHHH
Confidence            99999999988      6669999999999999988422211111            11222333449999999999999


Q ss_pred             HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHh--ccCCccccccC-CchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934          200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFV--GESNLSAWRLK-PDIELASIVYSAFFGLSFITVVHTFGL  275 (348)
Q Consensus       200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~a~  275 (348)
                      ...+.+ ++..++++ ++.+.+.+.+.++.+...+....  .++..+..... ..+.....+..-.+++.+++.+.++..
T Consensus       168 ~~~~~q-e~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~  246 (303)
T PF08449_consen  168 FTGVYQ-EKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLI  246 (303)
T ss_pred             HHHHHH-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999 88888776 68899999999998888877766  32211111100 111233333344447788888889999


Q ss_pred             hcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934          276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      ++.++...+++..+.-+++++++++++|+++++.+|+|.++++.|..+....++|+
T Consensus       247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999998877665

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.77  E-value=3.9e-18  Score=153.36  Aligned_cols=291  Identities=14%  Similarity=0.141  Sum_probs=227.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATS--KGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSL   86 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~   86 (348)
                      .+..++.....++-.......|..++  +.--|..++..+...+.+..... ...+ ++  .. +..++.++..++..|+
T Consensus        16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~--~~-~~~~~~~~~~llpl~~   91 (316)
T KOG1441|consen   16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVP--PS-KISSKLPLRTLLPLGL   91 (316)
T ss_pred             HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCC--CC-ccccccchHHHHHHHH
Confidence            34445555555666666677899986  55668888888887777777766 5543 33  22 2235567899999999


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      ..+++..+.+.++++.+++..+++..++|.+++++++++.+|+.+.      ..+..++....|+.+...          
T Consensus        92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~------~~~lsL~piv~GV~ias~----------  155 (316)
T KOG1441|consen   92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSS------MTYLSLLPIVFGVAIASV----------  155 (316)
T ss_pred             HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcc------eEEEEEEEeeeeEEEeee----------
Confidence            9999999999999999999999999999999999999999999944      477888888888887772          


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhh--cCC-chHHHHHHHHHHHHHHHH-HHHHhccCCc
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMK--LYP-AEFVVTLLYCLFATIISA-PICFVGESNL  242 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  242 (348)
                                  .+.+-+..|...++++.+..++.+++. ++..+  +.+ ++.+...++.-.+...++ |+....+++.
T Consensus       156 ------------~e~~fn~~G~i~a~~s~~~~al~~I~~-~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~  222 (316)
T KOG1441|consen  156 ------------TELSFNLFGFISAMISNLAFALRNILS-KKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK  222 (316)
T ss_pred             ------------ccccccHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc
Confidence                        223445679999999999999999999 88884  344 799999999999999988 8766655543


Q ss_pred             cc--cccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHh
Q 018934          243 SA--WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVG  320 (348)
Q Consensus       243 ~~--~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g  320 (348)
                      ..  ....++......++.. ++...-+..-+..+.+++|...++.....-.+.++.++++++|+.++.+..|+++.+.|
T Consensus       223 ~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~G  301 (316)
T KOG1441|consen  223 FVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILG  301 (316)
T ss_pred             eeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHH
Confidence            20  0001222334444444 45555566667889999999999999999999999999999999999999999999999


Q ss_pred             hhhheecccccccc
Q 018934          321 FYTVLWGKANDEAG  334 (348)
Q Consensus       321 ~~l~~~~~~~~~~~  334 (348)
                      ++++.+.|++++++
T Consensus       302 v~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  302 VFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHhhhhhcc
Confidence            99999877766543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.66  E-value=2.5e-15  Score=114.15  Aligned_cols=135  Identities=16%  Similarity=0.131  Sum_probs=121.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      ...++.++.+++++...++.|..+ +++||...++.|..+..+++..+ ++.. +.  +.....++|.|..+.+.|+.++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v-~~~~g~~--~~~~~~~~k~~lflilSGla~g   78 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIV-LLVTGNW--QAGGEIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHH-HHhcCce--ecccccCcceehhhhHHHHHHH
Confidence            456789999999999999999996 99999999999999999999988 7765 33  2223467888999999998889


Q ss_pred             HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .++.+||.+++...++.+..+..++|+++++++++++|||+      +..+++|+.+...|++++.
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~l------s~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERL------SLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCC------CHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999      5559999999999998876

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.60  E-value=3.6e-15  Score=126.43  Aligned_cols=258  Identities=14%  Similarity=0.083  Sum_probs=200.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHH
Q 018934           38 MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGF  117 (348)
Q Consensus        38 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~  117 (348)
                      -.|...+|..++.-+++..++ +.++|+   . .   ...|+.+++.++..+=++++...|.+|++...+..+---....
T Consensus        46 N~Pt~QtFl~Y~LLalVY~~~-~~fR~~---~-~---~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~  117 (336)
T KOG2766|consen   46 NAPTSQTFLNYVLLALVYGPI-MLFRRK---Y-I---KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPC  117 (336)
T ss_pred             CCccHHHHHHHHHHHHHHhhH-HHhhhH---H-H---HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHH
Confidence            346677899999999999988 777422   1 1   2236668899988899999999999999999999998888888


Q ss_pred             HHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHH
Q 018934          118 TFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLL  197 (348)
Q Consensus       118 ~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  197 (348)
                      +.+++|+++|.|-      ++.++.|+++++.|++.+++. +-.             +++..+..+...|+.+.++++-+
T Consensus       118 v~~lsw~fLktrY------rlmki~gV~iCi~GvvmvV~s-DV~-------------agd~aggsnp~~GD~lvi~GATl  177 (336)
T KOG2766|consen  118 VLVLSWFFLKTRY------RLMKISGVVICIVGVVMVVFS-DVH-------------AGDRAGGSNPVKGDFLVIAGATL  177 (336)
T ss_pred             HHHHHHHHHHHHH------hhheeeeEEeEecceEEEEEe-eec-------------cccccCCCCCccCcEEEEeccee
Confidence            8899999999977      777999999999999999842 221             11233344556799999999999


Q ss_pred             HHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018934          198 ISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRM  277 (348)
Q Consensus       198 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~  277 (348)
                      ||..++.. ..+.|+.+ ..+++....++|+++..+. .+.+.+.. ..+.++.+....+. ..++..+-|.+.-..+|.
T Consensus       178 YaVSNv~E-Eflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~-~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~  252 (336)
T KOG2766|consen  178 YAVSNVSE-EFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHV-STLHWDSAIFLYLR-FALTMFLLYSLAPILIKT  252 (336)
T ss_pred             eeeccccH-HHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccce-eeEeehHHHHHHHH-HHHHHHHHHHhhHHheec
Confidence            99999999 99999998 8999999999999998888 55554311 11112222233333 344667777777788899


Q ss_pred             CCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934          278 KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  330 (348)
Q Consensus       278 ~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~  330 (348)
                      .+++-.++-....-.++.++  ..||-+.+|...+..+.+..|.+++..+++.
T Consensus       253 ~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~  303 (336)
T KOG2766|consen  253 NSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKD  303 (336)
T ss_pred             CCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccC
Confidence            99999999888888888888  6678889999999999999998888544443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.58  E-value=7.1e-14  Score=106.34  Aligned_cols=136  Identities=17%  Similarity=0.110  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  266 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  266 (348)
                      ...+++++++++++..+.. |.-.++.+ |...+.+.......++..+....++. +.....++..|..+...|+ .+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~-KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGl-a~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFA-KIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGL-AGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHH-HHHH
Confidence            5679999999999999999 88888887 88889999888888877776665542 2222225567888888885 8899


Q ss_pred             HHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          267 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       267 ~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                      +..+|++|++..+++++.++.-++|+++++++++++||+++..+++|+.+|.+|.++..+
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999999887653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.53  E-value=6e-13  Score=111.74  Aligned_cols=261  Identities=15%  Similarity=0.128  Sum_probs=197.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHH
Q 018934           40 YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTF  119 (348)
Q Consensus        40 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~  119 (348)
                      ...+++++++...++.=++ ..+ |+  +  .+.+.-.-+.+...++...++....+.+++|.|=....+-.+.-|+-++
T Consensus        53 alaLVf~qC~~N~vfAkvl-~~i-r~--~--~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM  126 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVL-FLI-RK--K--TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM  126 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhh-eee-cc--c--ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence            3455666666666665444 333 32  1  1122223456666777668889999999999998888888999999999


Q ss_pred             HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934          120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS  199 (348)
Q Consensus       120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  199 (348)
                      +++.++.+.+.+||      +...++..+.|+.+.. ++...-.              +.+..+...|.++.+.+-..-+
T Consensus       127 ilGVl~~~KsY~w~------kY~cVL~IV~GValFm-YK~~Kv~--------------g~e~~t~g~GElLL~lSL~mDG  185 (337)
T KOG1580|consen  127 ILGVLFAHKSYHWR------KYCCVLMIVVGVALFM-YKENKVG--------------GAEDKTFGFGELLLILSLAMDG  185 (337)
T ss_pred             eeehhhhcccccHH------HHHHHHHHHHHHHHhh-ccccccC--------------CCcccccchHHHHHHHHHHhcc
Confidence            99999999988554      9999999999999887 5432111              2235566789999999999999


Q ss_pred             HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC--ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018934          200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN--LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  276 (348)
Q Consensus       200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~  276 (348)
                      +....+ .+..+.+. ....++.+.++.+.+.+..-.+++++.  +..+....+..|..+..+++ ++++++++.+.-..
T Consensus       186 lTg~~Q-drira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~  263 (337)
T KOG1580|consen  186 LTGSIQ-DRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVE  263 (337)
T ss_pred             cchhHH-HHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHH
Confidence            998888 66666554 456788888888888776555554432  11111123346677777777 99999999999999


Q ss_pred             cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          277 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       277 ~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      ..+|..-+++....-.++++.++++++.+++++||+|.++++.|...-....|
T Consensus       264 ~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  264 EFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             HhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence            99999999999999999999999999999999999999999999887664433

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.51  E-value=6.5e-12  Score=109.63  Aligned_cols=283  Identities=17%  Similarity=0.190  Sum_probs=197.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhcc-C-CCCCCCCchh-HHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRS-N-TASLPLFKFP-VISRICFLSL   86 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~-~~~~~~~~~~-~~~~~~~~g~   86 (348)
                      ...+++++..-+.+..--+...-....++ |..++.+..++-.++.... -..++. . +.+ -..+|+ +.+++...|+
T Consensus        15 V~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~-~~l~~~~~~r~r-~~~sw~~~Lr~~aPtal   92 (349)
T KOG1443|consen   15 VLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALS-RRLYQCSVPRAR-VVLSWRDYLRRLAPTAL   92 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHH-HHHHhccCCccc-cCCcHHHHHHHhhhhhh
Confidence            34444455444444433222111123333 7778888887777776655 343321 0 111 234444 4456667888


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      +.++...+.+++++|++.+.-++..+..++|+.+++.+|.-||+      ++.-..-+++...|++++. .+.       
T Consensus        93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~------~w~L~l~v~lI~~Glflft-~Ks-------  158 (349)
T KOG1443|consen   93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKF------RWALVLIVLLIAVGLFLFT-YKS-------  158 (349)
T ss_pred             hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHH------HHHHHHHHHHHhhheeEEE-ecc-------
Confidence            88999999999999999999999999999999999999999999      4446777777888888887 333       


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC----chHHHHHHHHHHHHHHHHHHHHhccCCc
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP----AEFVVTLLYCLFATIISAPICFVGESNL  242 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                                    ++-...|..+.+.+.++-++-.... +..+++.+    +|........-...+.++|..+..|+..
T Consensus       159 --------------Tqf~i~Gf~lv~~aS~~sGlRW~~t-Q~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~  223 (349)
T KOG1443|consen  159 --------------TQFNIEGFFLVLAASLLSGLRWAFT-QMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLH  223 (349)
T ss_pred             --------------cceeehhHHHHHHHHHhhhhhHHHH-HHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccc
Confidence                          2334569999999999988888888 67666654    6787777777777777888888887642


Q ss_pred             cc-----cccCCc-hhHHHHHHHHHHHHHHHHHHHH---HhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhh
Q 018934          243 SA-----WRLKPD-IELASIVYSAFFGLSFITVVHT---FGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIG  313 (348)
Q Consensus       243 ~~-----~~~~~~-~~~~~~l~~~~~~~~~~~~l~~---~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG  313 (348)
                      ..     +...+. ..+..+..++. ++.+++.+-.   .-..+++....++.....-+-+.+++..+.+|+++...|.|
T Consensus       224 ~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~G  302 (349)
T KOG1443|consen  224 LITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLG  302 (349)
T ss_pred             cchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHH
Confidence            11     211122 12333333332 3333443332   34678899999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhe
Q 018934          314 GVITCVGFYTVL  325 (348)
Q Consensus       314 ~~li~~g~~l~~  325 (348)
                      ..+...|+.+..
T Consensus       303 l~i~~agi~~~~  314 (349)
T KOG1443|consen  303 LAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999983

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.51  E-value=2.7e-12  Score=113.15  Aligned_cols=232  Identities=13%  Similarity=0.178  Sum_probs=167.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhce
Q 018934           73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAM  152 (348)
Q Consensus        73 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  152 (348)
                      .++++.+.+.+.+++....+.+.|.++++.+|+.-+++.++..+++++++++++|+|+      ++.+|.++.+.+.|+.
T Consensus        12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~l------s~~qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRL------SRRQWLALFLLVAGVV   85 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHccc------chhhHHHHHHHHHHHh
Confidence            3567789999999999999999999999999999999999999999999999999999      5569999999999998


Q ss_pred             eEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHH
Q 018934          153 LVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIIS  231 (348)
Q Consensus       153 li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  231 (348)
                      ++-. ++......    .+..+.+.+.+..+...|....++++++.++..+.. ++..|+.+ +...........+.++.
T Consensus        86 lv~~-~~~~~~~~----~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~-E~~lK~~~~s~~~~N~qL~~~gi~~~  159 (244)
T PF04142_consen   86 LVQL-SSSQSSDN----SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYF-EKLLKRSNVSLWIQNMQLYLFGILFN  159 (244)
T ss_pred             eeec-CCcccccc----ccccccccccccchhHhHHHHHHHHHHHHHHHHHHH-HHHhcccchhHHHHHHHHHHHHHHHH
Confidence            8872 22211110    000001112235667889999999999999999999 99999986 33344555555566655


Q ss_pred             HHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh
Q 018934          232 APICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV  311 (348)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~  311 (348)
                      .+.....+.+... ....-..+-...+.-++...++=.+....+|+.+...=+.....+.+++.+.++++++.+++....
T Consensus       160 ~~~~~~~~~~~~~-~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~  238 (244)
T PF04142_consen  160 LLALLLSDGSAIS-ESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFL  238 (244)
T ss_pred             HHHHhcccccccc-cCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHh
Confidence            5554443332100 000001122223333344445555566678888887778888899999999999999999999999


Q ss_pred             hhHHHH
Q 018934          312 IGGVIT  317 (348)
Q Consensus       312 iG~~li  317 (348)
                      +|..++
T Consensus       239 lg~~~V  244 (244)
T PF04142_consen  239 LGAALV  244 (244)
T ss_pred             hheecC
Confidence            998653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.49  E-value=2.3e-11  Score=107.56  Aligned_cols=289  Identities=12%  Similarity=0.080  Sum_probs=210.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVF--YSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLV   87 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   87 (348)
                      .++....+.-.+.-..+.++.|..++..-.|..+..  ++.+...+.+... -.. |-  ...+..+++..+..+...++
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~-~l--v~~~~l~~~~~kk~~P~~~l   86 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRL-GL--VNFRPLDLRTAKKWFPVSLL   86 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHh-ce--eecCCcChHHHHHHccHHHH
Confidence            344444544444555567778998866666666665  8888887777655 333 22  22256778888999999999


Q ss_pred             HHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCC
Q 018934           88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS  167 (348)
Q Consensus        88 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~  167 (348)
                      ..+..+.-..+++|.++..-+++.+..|+++++....++|.++      ++..+.++...+.|.....+           
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~------~~~v~~Sv~~m~~~s~~~~~-----------  149 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRP------SNKVWASVFAMIIGSVAAAF-----------  149 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCc------hhhHHHHHHHHHHHHHhhcc-----------
Confidence            9888888999999999999999999999999999999999666      66688888888888766651           


Q ss_pred             CccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCc---c
Q 018934          168 IPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL---S  243 (348)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  243 (348)
                                 ++......|+.+++...+.-+.+.+.. |+-.+..+ .......+..+.+.........++++..   .
T Consensus       150 -----------~d~sf~~~gY~w~~~n~~~~a~~~v~~-kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~  217 (314)
T KOG1444|consen  150 -----------TDLSFNLRGYSWALANCLTTAAFVVYV-KKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL  217 (314)
T ss_pred             -----------ccceecchhHHHHHHHHHHHHHHHHHH-HHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence                       122333449999999999999999998 76665544 4567788888888887777776665411   1


Q ss_pred             ccc-cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934          244 AWR-LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY  322 (348)
Q Consensus       244 ~~~-~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~  322 (348)
                      ..+ ......+..+...++ ++..-.++-..+.+..+++..++.....-..+.+-..++++++.++...+|..+-+.|.+
T Consensus       218 ~~~~~~~~~~~~~~~lScv-~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv  296 (314)
T KOG1444|consen  218 NFDNWSDSSVLVVMLLSCV-MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV  296 (314)
T ss_pred             hcccccchhHHHHHHHHHH-HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence            111 111223444444444 555555566688999999999999977777777777777789999999999999999988


Q ss_pred             hheecccccc
Q 018934          323 TVLWGKANDE  332 (348)
Q Consensus       323 l~~~~~~~~~  332 (348)
                      .+...+.+++
T Consensus       297 ~Y~~~~~~~k  306 (314)
T KOG1444|consen  297 LYSYATFRKK  306 (314)
T ss_pred             HHhhhhhhhc
Confidence            8887654443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.45  E-value=1.5e-11  Score=107.41  Aligned_cols=263  Identities=15%  Similarity=0.164  Sum_probs=202.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHH
Q 018934           39 SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFT  118 (348)
Q Consensus        39 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~  118 (348)
                      ++..+.+.+.+.+.++-... ..+ ++  +.  ...+..++.+...++.+.+...|.|.|++|++--...+-..+--+-+
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~-l~~-~k--~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPV  123 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAM-LKW-WK--KE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPV  123 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHH-Hhc-cc--cc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHH
Confidence            57788888888887777544 333 32  21  22344588899999999999999999999999888888888888888


Q ss_pred             HHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHH
Q 018934          119 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLI  198 (348)
Q Consensus       119 ~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  198 (348)
                      +++..++.|.|.      +..+....++...|+.+..+.+.+.             +...+.+.+...|..++...-++-
T Consensus       124 mlmg~Lvy~~ky------~~~eYl~~~LIs~GvsiF~l~~~s~-------------s~~~~g~~ns~~G~~Ll~~~L~fD  184 (327)
T KOG1581|consen  124 MLMGTLVYGRKY------SSFEYLVAFLISLGVSIFSLFPNSD-------------SSSKSGRENSPIGILLLFGYLLFD  184 (327)
T ss_pred             HHHHHHHhcCcc------CcHHHHHHHHHHhheeeEEEecCCC-------------CccccCCCCchHhHHHHHHHHHHH
Confidence            899999999988      4458888888999998888542221             111334556778999999999999


Q ss_pred             HHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC-ccc--c-ccCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018934          199 SVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN-LSA--W-RLKPDIELASIVYSAFFGLSFITVVHTF  273 (348)
Q Consensus       199 a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~l~~~~~~~~~~~~l~~~  273 (348)
                      ++.+..+ .++.++++ .+..++...++.+++..... ++..++ .+.  . ...++ .+.-++...+ |+.+++.+-++
T Consensus       185 gfTn~tQ-d~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~-~~~Di~l~s~-~gavGQ~FI~~  260 (327)
T KOG1581|consen  185 GFTNATQ-DSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPD-VAFDILLYST-CGAVGQLFIFY  260 (327)
T ss_pred             hhHHhHH-HHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChh-HHHHHHHHHH-hhhhhhheehh
Confidence            9999999 88887766 68889999999888877665 333321 111  1 11122 3344444444 78899999999


Q ss_pred             hhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934          274 GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  330 (348)
Q Consensus       274 a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~  330 (348)
                      -+++.++...+.++.+.=.+++.++.+.+|.+.+..||+|..+++.|+.+-...+++
T Consensus       261 TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  261 TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999887665554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.44  E-value=3.4e-12  Score=109.90  Aligned_cols=282  Identities=16%  Similarity=0.142  Sum_probs=198.2

Q ss_pred             HHHHHHHHHHH---hCC----CCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCC--------CCCC-chhHHHHHHHHHH
Q 018934           24 VGENIIFKLAT---SKG----MSYFVFVFYSYAATTLVLLLLFPFIF-RSNTAS--------LPLF-KFPVISRICFLSL   86 (348)
Q Consensus        24 ~~~~~~~k~~~---~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~--------~~~~-~~~~~~~~~~~g~   86 (348)
                      +.+.++.|++=   .++    -+|+..+...++.-++.+.++ .+++ |.+.+.        .+.. ++-.....+.-++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf-~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVF-KLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcccccccccccccCCCCcceecChHH
Confidence            45666777762   112    458888888888888888888 6665 442111        0111 1222344455777


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      |...+..++|.|+.+++++.-+++....-+|+.+++.-+++.++.      ..+|.|+.....|++++.. .+-...   
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~------~~qWl~i~fv~lGlviVg~-~d~~~~---  164 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTIT------GRQWLGILFVSLGLVIVGS-LDVHLV---  164 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccc------hhhHHHHHHHHhhhheeee-eecccc---
Confidence            778889999999999999999999999999999999999999994      4599999999999998873 211110   


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhc----cCC
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVG----ESN  241 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~  241 (348)
                              ..+..+.++...|+++.+++-+.-|...++. +|..++.+ +|.+..+|..+++.+.+..++...    ..+
T Consensus       165 --------~~p~~d~s~iitGdllIiiaqiivaiQ~v~E-ek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~  235 (372)
T KOG3912|consen  165 --------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCE-EKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD  235 (372)
T ss_pred             --------cCCccccccchhhhHHHHHHHHHHHHHHHHH-HhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence                    1113345667889999999999999999999 88888877 899999999988865554443332    221


Q ss_pred             ccccccC----Cch-hHH-----HHHHHHHHHHHHHHHHHH----HhhhcCCceEEeechhhHHHHHHHHHHHHhcCcch
Q 018934          242 LSAWRLK----PDI-ELA-----SIVYSAFFGLSFITVVHT----FGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALH  307 (348)
Q Consensus       242 ~~~~~~~----~~~-~~~-----~~l~~~~~~~~~~~~l~~----~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~  307 (348)
                      ...-.+.    +.. .+.     ..++++..+...+..++|    .--+..++++-.+...+...+..+++.....|.++
T Consensus       236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence            1000000    000 000     012222223333344444    22466788888999999999999999999999999


Q ss_pred             hhhhhhHHHHHHhhhhhe
Q 018934          308 LGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       308 ~~~~iG~~li~~g~~l~~  325 (348)
                      ..|+.|.++.+.|++++.
T Consensus       316 llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999886

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.44  E-value=4.7e-13  Score=105.74  Aligned_cols=122  Identities=25%  Similarity=0.419  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHh
Q 018934           21 CTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTG   98 (348)
Q Consensus        21 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~a   98 (348)
                      ++|+.+.++.|... ++.||...+++|+..+.+ ++++ .... ++  +. ...+++++......+.+. ..++.+++.+
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLIL-LLILGRK--PF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHH-HHhhccc--cc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence            47899999999996 679999999999999998 5555 5544 33  22 456777888889999887 9999999999


Q ss_pred             hcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934           99 IAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (348)
Q Consensus        99 l~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  154 (348)
                      +++++++.++++.+++|+++.+++++++||++      ++.++.|+++++.|+.++
T Consensus        75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~------~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   75 LKYISASIVSILQYLSPVFAAILGWLFLGERP------SWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      666999999999998765

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.42  E-value=3.4e-10  Score=101.69  Aligned_cols=296  Identities=11%  Similarity=0.131  Sum_probs=202.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHHHhh-cc-CCCCCC------CCchhHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKG---MSYFVFVFYSYAATTLVLLLLFPFIF-RS-NTASLP------LFKFPVIS   79 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~-~~-~~~~~~------~~~~~~~~   79 (348)
                      .-++.++...+-++......|..-..+   +.|...++.--++-.++-... ++.. |+ ..+..+      ...+++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFL-LLFEERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence            456778888889999999999885444   667777777776666665544 4433 22 001101      12345677


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeC
Q 018934           80 RICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKG  159 (348)
Q Consensus        80 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g  159 (348)
                      +..+-+++....+.+.|.++.+.+++.-++..++..+-|+++..+++++|+      ++.+|.++++..+|+.++-....
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL------s~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL------SRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHhccCC
Confidence            788888888888889999999999999999999999999999999999999      66699999999999988752111


Q ss_pred             ccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchH-HHHHHHHHHHHHHHHHHHHhc
Q 018934          160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEF-VVTLLYCLFATIISAPICFVG  238 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  238 (348)
                      +..           ++...........|....+.++...++..++. ++.+|+.+.+. .-.....+++.++...-.+..
T Consensus       168 ~~~-----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYf-EkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~  235 (345)
T KOG2234|consen  168 SPT-----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYF-EKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ  235 (345)
T ss_pred             CCC-----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHH-HHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc
Confidence            110           11112335667789999999999999999999 99998877333 333344444555555444444


Q ss_pred             cCCccccccC----CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhH
Q 018934          239 ESNLSAWRLK----PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGG  314 (348)
Q Consensus       239 ~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~  314 (348)
                      +.+...|.-.    +...|..++..++     +=.+....+|+.+-..=+....+..+++.+.++.+++-+|+....+|.
T Consensus       236 d~~~i~~~gff~G~s~~vw~vVl~~a~-----gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~  310 (345)
T KOG2234|consen  236 DGEAINEYGFFYGYSSIVWLVVLLNAV-----GGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA  310 (345)
T ss_pred             cccccccCCccccccHHHHHHHHHHhc-----cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence            4332211100    1223333333333     333333344554444444555678899999999999999999999999


Q ss_pred             HHHHHhhhhheecccc
Q 018934          315 VITCVGFYTVLWGKAN  330 (348)
Q Consensus       315 ~li~~g~~l~~~~~~~  330 (348)
                      .+++.++.++...+++
T Consensus       311 ~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  311 LLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHHHHhhcCCcc
Confidence            9999999999854443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.42  E-value=5.5e-13  Score=105.33  Aligned_cols=125  Identities=15%  Similarity=0.266  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934          196 LLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL  275 (348)
Q Consensus       196 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~  275 (348)
                      ++||.+.+.. |+..++.+ +.....+.+..+.+ ..+.....+...  ....+...+....+.+++++.+++.++++++
T Consensus         1 ~~~a~~~~~~-k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFS-KKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHH-HHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            3688899999 99999987 99999999999987 666655555432  2222455777888888888899999999999


Q ss_pred             hcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      ++.+++.++++.+++|+++.++++++++|++++.+++|+.+++.|+++..
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.22  E-value=5.6e-10  Score=99.89  Aligned_cols=133  Identities=17%  Similarity=0.258  Sum_probs=110.9

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSY--FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFL   84 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (348)
                      ..+.++.+++++++++|+......|... ++.++  .....+++..+.+++.++ ....++  +  +..+.+++...+..
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~--~--~~~~~~~~~~~~~~  197 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPF-AWFLGP--N--PQALSLQWGALLYL  197 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHH-HHhcCC--C--CCcchHHHHHHHHH
Confidence            3456899999999999999999999995 66664  455557788888888877 665322  1  22356677778888


Q ss_pred             HHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhc
Q 018934           85 SLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGA  151 (348)
Q Consensus        85 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv  151 (348)
                      +.++ ..++.++++++++.+++.++.+.++.|+++.++++++++|++      +..++.|+.+.+.|+
T Consensus       198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~------~~~~~~G~~li~~g~  259 (260)
T TIGR00950       198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETL------SLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHhc
Confidence            8887 899999999999999999999999999999999999999999      666999999999986

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.14  E-value=1.7e-08  Score=89.01  Aligned_cols=251  Identities=13%  Similarity=0.119  Sum_probs=168.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhh-hhhH
Q 018934           39 SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFK--FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIG-NLTP  115 (348)
Q Consensus        39 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~-~~~P  115 (348)
                      +|.+-.+--...+.++-+.. .+. ++     +..+  .+.+...++.|++...++...+.++++.+++.+-.+. ..+-
T Consensus        11 ~~~~Q~lG~t~Gali~alv~-~~~-~~-----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QL   83 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVV-FLF-RQ-----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQL   83 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHH-HHH-hC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence            44444444444444444444 333 33     3333  4788999999999999999999999999999999996 5888


Q ss_pred             HHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHH
Q 018934          116 GFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISN  195 (348)
Q Consensus       116 ~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~  195 (348)
                      +.+.+++.++++|--+.++  -.....++++.++|+.+.. .+++..+             ..++..+...|....+++.
T Consensus        84 vg~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts-~~~~~~~-------------~~~~~~~~~kgi~~Ll~st  147 (269)
T PF06800_consen   84 VGTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTS-YQDKKSD-------------KSSSKSNMKKGILALLIST  147 (269)
T ss_pred             HHHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhc-ccccccc-------------ccccccchhhHHHHHHHHH
Confidence            8899999999999443321  1223557888888887776 2222111             1122456678999999999


Q ss_pred             HHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934          196 LLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL  275 (348)
Q Consensus       196 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~  275 (348)
                      ++|..|.+.. +...  .+ +.....-+.+.-.+....+....+...  .   ....|.. +..|+ .-.++..++..+.
T Consensus       148 igy~~Y~~~~-~~~~--~~-~~~~~lPqaiGm~i~a~i~~~~~~~~~--~---~k~~~~n-il~G~-~w~ignl~~~is~  216 (269)
T PF06800_consen  148 IGYWIYSVIP-KAFH--VS-GWSAFLPQAIGMLIGAFIFNLFSKKPF--F---EKKSWKN-ILTGL-IWGIGNLFYLISA  216 (269)
T ss_pred             HHHHHHHHHH-HhcC--CC-hhHhHHHHHHHHHHHHHHHhhcccccc--c---ccchHHh-hHHHH-HHHHHHHHHHHhH
Confidence            9999998888 5532  22 555444333332332233322221111  1   2223333 33344 3346888899999


Q ss_pred             hcCCceEEeechhhHHHHHHHHHHHHhcCcchhh----hhhhHHHHHHhhhh
Q 018934          276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG----SVIGGVITCVGFYT  323 (348)
Q Consensus       276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~----~~iG~~li~~g~~l  323 (348)
                      ++.+.+..-.+..+..+++.+.+.+++||+=+..    ..+|.++++.|.++
T Consensus       217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999987755    45788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.12  E-value=1e-10  Score=90.99  Aligned_cols=103  Identities=21%  Similarity=0.335  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHH
Q 018934           45 FYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI  123 (348)
Q Consensus        45 ~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~  123 (348)
                      .+|++.+.+++..+ ...+++.++..+..+.+.+.+....|.++ ..++.++++|+++.+ +.++++.+++|+++.++++
T Consensus         2 a~r~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLFLLII-LLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHH-HHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            57999999998888 66642200111233445567778888888 699999999999999 5889999999999999999


Q ss_pred             HHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934          124 IFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus       124 l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +++|||+      ++.++.++++++.|++++.
T Consensus        80 ~~~~er~------~~~~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   80 LFFKERL------SPRRWLAILLILIGVILIA  105 (113)
T ss_pred             HHhcCCC------CHHHHHHHHHHHHHHHHHh
Confidence            9999999      5559999999999999987

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=3.4e-10  Score=97.44  Aligned_cols=282  Identities=15%  Similarity=0.134  Sum_probs=193.5

Q ss_pred             HHHHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCC--CCchhHHHHHHHHHHHHHHHHHHHHH
Q 018934           26 ENIIFKLATSKG----MSYFVFVFYSYAATTLVLLLLFPFIFRSN--TASLP--LFKFPVISRICFLSLVGSFFRILGYT   97 (348)
Q Consensus        26 ~~~~~k~~~~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~   97 (348)
                      .....|+.++..    -.|...+++++++...+-..+ ....++.  +...+  +.+.+..+...-..+........-.+
T Consensus        43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~l-s~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnl  121 (347)
T KOG1442|consen   43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVL-SSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNL  121 (347)
T ss_pred             hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHH-HHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccce
Confidence            345567776331    358888898888776654444 3332221  01111  23444455555555555566666778


Q ss_pred             hhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCC
Q 018934           98 GIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP  177 (348)
Q Consensus        98 al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~  177 (348)
                      +++|.+++.-.+=.++..+|++++.++++|+|.      +.....++++.+.|-.+-.  +.+                 
T Consensus       122 cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkT------s~~~~~~C~lIi~GF~lGv--dqE-----------------  176 (347)
T KOG1442|consen  122 CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKT------SFFALGCCLLIILGFGLGV--DQE-----------------  176 (347)
T ss_pred             ehhhcceEEEEeccchhhhHHHHhHHhhccccc------ccccceeehhheehheecc--ccc-----------------
Confidence            999999999999999999999999999999988      4446666666666643332  111                 


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCccccc--cCCc-hhH
Q 018934          178 QSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPD-IEL  253 (348)
Q Consensus       178 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~  253 (348)
                      +.++.-...|.+++..+.++-|+..+.. |+...... .-..++.+....+.+..+|...+.++-...+.  ..+. ..|
T Consensus       177 ~~~~~ls~~GvifGVlaSl~vAlnaiyt-kk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw  255 (347)
T KOG1442|consen  177 GSTGTLSWIGVIFGVLASLAVALNAIYT-KKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFW  255 (347)
T ss_pred             cccCccchhhhHHHHHHHHHHHHHHHhh-heecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHH
Confidence            1123445679999999999999999999 76654444 34578889999999999998777554222121  1122 234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccccc
Q 018934          254 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA  333 (348)
Q Consensus       254 ~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~  333 (348)
                      ..+...|+++-.++|.. .+-+|..+|.+.++-....-..-.++++.+++|.-+..-|-|-.++++|...+++-|+.+.+
T Consensus       256 ~~mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~  334 (347)
T KOG1442|consen  256 ILMTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR  334 (347)
T ss_pred             HHHHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence            44445555444444333 24578899999999999999999999999999999999999999999999999987666554


Q ss_pred             cC
Q 018934          334 GK  335 (348)
Q Consensus       334 ~~  335 (348)
                      ++
T Consensus       335 ~~  336 (347)
T KOG1442|consen  335 KA  336 (347)
T ss_pred             hh
Confidence            43

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.04  E-value=2.7e-09  Score=97.39  Aligned_cols=138  Identities=9%  Similarity=0.054  Sum_probs=110.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc--cCCchhHHHHHHHH
Q 018934          183 RWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPDIELASIVYSA  260 (348)
Q Consensus       183 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~  260 (348)
                      +...|..+.+.+++.|+...+.. |.. .+.+ |.+...+++.++.+++.+......+ .....  ..+...+ .....+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~-k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYF-KLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHH-HHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence            45679999999999999999999 765 5666 9999999999998877776544322 11100  0011222 223356


Q ss_pred             HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      .++.+..+.++++++++.+++.++++.++.|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            66778899999999999999999999999999999999999999999999999999999988765

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.03  E-value=3.1e-09  Score=87.17  Aligned_cols=138  Identities=16%  Similarity=0.214  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcC-----C-chHHHHHHHHHHHHHHHHHHHHhccCCcccc---ccC------Cch
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLY-----P-AEFVVTLLYCLFATIISAPICFVGESNLSAW---RLK------PDI  251 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~  251 (348)
                      |..+++.+.++.|++.+.. |+..++.     + ++.+...+....+.+.+.|.....|+.....   ...      ...
T Consensus         1 G~~~~l~s~~~~al~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLI-KKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHH
Confidence            5789999999999999999 8877772     3 7999999999999999999988877642111   000      112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          252 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                      .+..++..|+ ....-....+..+++.+|...++...+..+..++.+++++||++++.+++|.++.++|.+++.+
T Consensus        80 ~~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   80 FIFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            3344444444 4556677777889999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.03  E-value=6.1e-09  Score=94.41  Aligned_cols=133  Identities=14%  Similarity=0.100  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHH
Q 018934          188 GLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  267 (348)
Q Consensus       188 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  267 (348)
                      ..+.+.++++||...+.. |+..++.+ +.  ..+....+++...|....... ...|... +..+......+.+.....
T Consensus         3 ~~~~~~aa~~~a~~~~~~-k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMA-KSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRL-PATFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHH-hhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCc-chhhHHHHHHHHHHHHHH
Confidence            468899999999999999 87777654 43  344555566666666554211 1223222 223444444555578889


Q ss_pred             HHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          268 TVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       268 ~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                      +.++++++++.+++.++++.+++|+++.++++++++|+++..+++|..+++.|+++...
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999887764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.02  E-value=5.6e-09  Score=85.82  Aligned_cols=214  Identities=15%  Similarity=0.172  Sum_probs=154.7

Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~  166 (348)
                      +..+.++.|..+++..++++++.+..+..-|+.+++++.+|+|+      ...++.+.++++.|++++. +.+       
T Consensus        62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~------~~~kIlaailAI~GiVmia-y~D-------  127 (290)
T KOG4314|consen   62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRF------MGFKILAAILAIGGIVMIA-YAD-------  127 (290)
T ss_pred             EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccch------hhhhHHHHHHHhCcEEEEE-ecc-------
Confidence            34688999999999999999999999999999999999999999      6669999999999998887 322       


Q ss_pred             CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHH-----HHHHHHHHHhccCC
Q 018934          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFA-----TIISAPICFVGESN  241 (348)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  241 (348)
                                  ++..+.++|..++..++...|+|-+.- |......+ --....++...+     .....++.+...+ 
T Consensus       128 ------------N~~a~e~iGi~~AV~SA~~aAlYKV~F-K~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~-  192 (290)
T KOG4314|consen  128 ------------NEHADEIIGIACAVGSAFMAALYKVLF-KMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAFTG-  192 (290)
T ss_pred             ------------chhhhhhhhHHHHHHHHHHHHHHHHHH-HHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhc-
Confidence                        223456789999999999999999988 88776655 111111111111     1222222222211 


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934          242 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF  321 (348)
Q Consensus       242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~  321 (348)
                      .+.|+.-....|..+...+.+... -..+.+.++....|...++-+....+--.+.+.++-+-..+...+.|-.+|+.|.
T Consensus       193 VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F  271 (290)
T KOG4314|consen  193 VEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF  271 (290)
T ss_pred             hHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            122321122346665555553443 3455567888889999999888888899999999877788899999999999998


Q ss_pred             hhheecccc
Q 018934          322 YTVLWGKAN  330 (348)
Q Consensus       322 ~l~~~~~~~  330 (348)
                      .+...+..+
T Consensus       272 iLiiiP~d~  280 (290)
T KOG4314|consen  272 ILIIIPEDK  280 (290)
T ss_pred             Hheecccch
Confidence            888765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.96  E-value=2.9e-08  Score=90.53  Aligned_cols=134  Identities=9%  Similarity=0.054  Sum_probs=107.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (348)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (348)
                      ...|.++.+.++++|+......|+.. +..++..... -...+.+++.++ .... .  .. ...++..+...+..|++.
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~-~~~~~~~~l~~~-~~~~-~--~~-~~~~~~~~~~~l~lgv~~  218 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAG-AEHGPATVAI-GSLIAALIFVPI-GALQ-A--GE-ALWHWSILPLGLAVAILS  218 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHH-HHHHHHHHHHHH-HHHc-c--Cc-ccCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999994 6777877654 445566666666 5542 1  11 223445555667888888


Q ss_pred             -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                       .+++.++++++++.++++++++..++|++..++++++++|++      +..+++|..+.+.|++...
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~------~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETL------TLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHH
Confidence             899999999999999999999999999999999999999999      6669999999999987775

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.94  E-value=9.4e-08  Score=82.77  Aligned_cols=263  Identities=12%  Similarity=0.085  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhH-HhhhhhhHHHHH
Q 018934           41 FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLA-SMIGNLTPGFTF  119 (348)
Q Consensus        41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a-~~l~~~~P~~~~  119 (348)
                      ..+++-++++...--+++ .-  +-...+ ++.+.+++   ...-......+.+-++++++--+--- -++..-.++-++
T Consensus        34 NLITFaqFlFia~eGlif-~s--kf~~~k-~kiplk~Y---~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM  106 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIF-TS--KFFTVK-PKIPLKDY---AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANM  106 (330)
T ss_pred             eehHHHHHHHHHHhceee-ec--cccccC-CCCchhhh---heehheeeeeeeeccceeeecccceEEEEEecCcHHHHH
Confidence            455665655554444444 21  110012 44444433   33333346667777788888744444 344667999999


Q ss_pred             HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934          120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS  199 (348)
Q Consensus       120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  199 (348)
                      ++++++.|.|-      +..|..++++..+|+++..+.+.+..+.-   .....+++..++...|.+|..+...+.+..|
T Consensus       107 ~~g~il~~k~Y------s~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~---~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa  177 (330)
T KOG1583|consen  107 ILGWILLGKRY------SLRQYSSVLMITIGIIICTLFSSKDGRSK---LSGLDSGSAQSDFFWWLIGIALLVFALLLSA  177 (330)
T ss_pred             HHHHHhcccee------ehhhhhhHHhhhhhheeEEeecCcchhhh---hcccccCcccccchHHHHHHHHHHHHHHHHH
Confidence            99999999977      55699999999999999986554433320   0011112234556788999999999988888


Q ss_pred             HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC----------cccccc-----CCchhHHHHHHHHHHH
Q 018934          200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN----------LSAWRL-----KPDIELASIVYSAFFG  263 (348)
Q Consensus       200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~l~~~~~~  263 (348)
                      ...+.+ +..-+|++ ++.+.+++..+++....+.    ..++          .+....     .-+..|.+++...+ .
T Consensus       178 ~mgiyq-E~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~  251 (330)
T KOG1583|consen  178 YMGIYQ-ETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-T  251 (330)
T ss_pred             HHHHHH-HHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-H
Confidence            888888 88777776 8889999998876654432    2221          000000     01224444444333 2


Q ss_pred             HHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          264 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       264 ~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      .-.+.--.+..-.+.++..++++..+.=.++.+++.+.+..++++..|+|.++++.|..++.
T Consensus       252 Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  252 QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            22222223334567788899999999999999999999999999999999999999977765

>TIGR00688 rarD rarD protein

Probab=98.94  E-value=1.1e-08  Score=91.34  Aligned_cols=135  Identities=10%  Similarity=0.099  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCc---cccccCCchh-HHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL---SAWRLKPDIE-LASIVYSAFF  262 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~l~~~~~  262 (348)
                      |..+.++++++|+...+.. |. ..+.+ |.+...++++++++++.+......+..   ..++...... +..+...|+ 
T Consensus         3 g~~~~i~a~~~wg~~~~~~-k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYS-KL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHH-HH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            7889999999999999999 87 45566 999999999999888776654433211   1111111222 333445555 


Q ss_pred             HHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          263 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       263 ~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      ..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999987664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.92  E-value=4e-08  Score=84.76  Aligned_cols=227  Identities=14%  Similarity=0.138  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934           77 VISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL  156 (348)
Q Consensus        77 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  156 (348)
                      .|+.+...+.+......+...++.|.+=....+...+--+-+++.+.++-+.|-      ++.+..+..+..+|.++..+
T Consensus       105 P~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY------~v~d~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  105 PWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRY------GVHDYIAAMLMSLGLIWFTL  178 (367)
T ss_pred             chhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccc------cHHHHHHHHHHHHHHHhhhh
Confidence            366777777777777888888888887665566666666666777777766654      88899999999999999884


Q ss_pred             eeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHH
Q 018934          157 YKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPIC  235 (348)
Q Consensus       157 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  235 (348)
                      .+..                  .+++-...|....-.|-++-|.---++ ++.++..+ +..++..+...++.+.+....
T Consensus       179 ADs~------------------~sPNF~~~Gv~mIsgALl~DA~iGNvQ-Ek~m~~~~~ss~EmvfySy~iG~vflf~~m  239 (367)
T KOG1582|consen  179 ADSQ------------------TSPNFNLIGVMMISGALLADAVIGNVQ-EKAMKMNPASSSEMVFYSYGIGFVFLFAPM  239 (367)
T ss_pred             cccc------------------cCCCcceeeHHHHHHHHHHHHHhhHHH-HHHHhhCCCCcceEEEeeecccHHHHHHHH
Confidence            3222                  233445678888888888888887888 88888877 456777777788888777666


Q ss_pred             HhccCCcccccc---CCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhh
Q 018934          236 FVGESNLSAWRL---KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI  312 (348)
Q Consensus       236 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~i  312 (348)
                      ..+++-+..|..   .+.....+....+. .+.++......-++..++..++.+....-.+++++++++|..+++....-
T Consensus       240 vlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~  318 (367)
T KOG1582|consen  240 VLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVW  318 (367)
T ss_pred             HhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhh
Confidence            666654444421   12223344444444 55567777777788999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhhhheeccc
Q 018934          313 GGVITCVGFYTVLWGKA  329 (348)
Q Consensus       313 G~~li~~g~~l~~~~~~  329 (348)
                      |..+++.|+++....++
T Consensus       319 ~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  319 SGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             hhHHHHHHHHhhcccCC
Confidence            99999999999887664

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.91  E-value=4.3e-08  Score=89.36  Aligned_cols=136  Identities=15%  Similarity=0.038  Sum_probs=110.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (348)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (348)
                      ...+.++.+.++++|+......|.. .. -++.....++...+.+.+.++ ......  ......+.+.+..+...++++
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIA-SLLSGE--RLTALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHH-HHHcCC--cccccCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999997 23 345566778888888877776 554211  110113456788888888887


Q ss_pred             -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                       ..++.++++++++.++++++++..+.|++++++++++++|++      +..+++|..+.+.|+.+..
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~------t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETL------SPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHHHHH
Confidence             899999999999999999999999999999999999999999      6669999999999997765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.89  E-value=2e-08  Score=79.38  Aligned_cols=122  Identities=19%  Similarity=0.167  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  266 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  266 (348)
                      |.++.+.+.++-+..+++- |+-.++.+ ..+.... . ...+   . ..     .      .+   ...++.|++++++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~-K~g~~~~g-~~~~~~~-~-~~~~---~-~~-----~------~p---~~~i~lgl~~~~l   60 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSL-KWGMSRLP-LLSHAWD-F-IAAL---L-AF-----G------LA---LRAVLLGLAGYAL   60 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHH-HHHHhhCC-CccchhH-H-HHHH---H-HH-----h------cc---HHHHHHHHHHHHH
Confidence            7788888988889999999 88888766 2221111 0 0000   0 00     0      00   1247888889999


Q ss_pred             HHHHHHHhhhcCCceEEeechhhHHHHHHHHHHH--HhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934          267 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI--FLSEALHLGSVIGGVITCVGFYTVLWGKAN  330 (348)
Q Consensus       267 ~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~--~~~e~~~~~~~iG~~li~~g~~l~~~~~~~  330 (348)
                      ++.+|++++++.+++.+.++....+++..+.++.  ++||++++.+++|.++|++|+++..+.+++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888875  899999999999999999999998765443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.86  E-value=3.9e-07  Score=82.81  Aligned_cols=229  Identities=14%  Similarity=0.201  Sum_probs=125.6

Q ss_pred             HHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeC
Q 018934           81 ICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKG  159 (348)
Q Consensus        81 ~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g  159 (348)
                      .++.|++. ..+..+.+.++.+.|.+..+.+....-++.++++..++|||+      ++.++.|+.+++.|..++.. .+
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~------~~~~~~G~~l~i~G~~liv~-~~  124 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL------TRRDIVGCALIILGSVLIVI-FA  124 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc------hHhHHhhHHHHHhhheeeEE-eC
Confidence            34555555 778889999999999999999999999999999999999999      66699999999999988874 33


Q ss_pred             ccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHH---HHHHHHHHH--HHHHHH
Q 018934          160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFV---VTLLYCLFA--TIISAP  233 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~---~~~~~~~~~--~~~~~~  233 (348)
                      +..+...+.+ +..+   .-.++.+. .+....... ...+..... ++..++.. -...   ..+-....+  ++....
T Consensus       125 ~~~~~~~t~~-~l~~---~~~~~~fl-~y~~~~~~~-~~~L~~~~~-~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i  197 (300)
T PF05653_consen  125 PKEEPIHTLD-ELIA---LLSQPGFL-VYFILVLVL-ILILIFFIK-PRYGRRNILVYISICSLIGSFTVLSAKAISILI  197 (300)
T ss_pred             CCCCCcCCHH-HHHH---HhcCccee-hhHHHHHHH-HHHHHHhhc-chhcccceEEEEEEeccccchhhhHHHHHHHHH
Confidence            3221110000 0000   00001111 111111111 111221112 22221111 0000   001001110  011111


Q ss_pred             HHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhH-HHHHHHHHHHHhcCc--chh--
Q 018934          234 ICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS-IAIAAITSFIFLSEA--LHL--  308 (348)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~-pv~a~~~~~~~~~e~--~~~--  308 (348)
                      -..+ +++ .+.  ..+..|..+ ...+.+...-....|+++++.+++.+.++.+.. ...+++-+.++++|.  .++  
T Consensus       198 ~~~~-~g~-~~f--~~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~  272 (300)
T PF05653_consen  198 KLTF-SGD-NQF--TYPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQ  272 (300)
T ss_pred             HHHh-cCc-hhh--hhhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHH
Confidence            1111 111 111  122233333 333446667777888999999999998877655 455566667777864  334  


Q ss_pred             --hhhhhHHHHHHhhhhheecc
Q 018934          309 --GSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       309 --~~~iG~~li~~g~~l~~~~~  328 (348)
                        ....|+.+++.|+++....|
T Consensus       273 ~~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  273 IIGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHHHhhheeeccC
Confidence              34577888899988886533

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.84  E-value=9.1e-08  Score=87.35  Aligned_cols=132  Identities=17%  Similarity=0.197  Sum_probs=102.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      ..|.++++.++++|+...+..|.. .++.++.....   ..+.+.+.+. ... .+  ......+++.+..++..++...
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~-~~~-~~--~~~~~~~~~~~~~l~~~~~~t~  226 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIK-YFL-SP--QPAMVFSLPAIIKLLLAAAAMG  226 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHH-HHH-hc--CccccCCHHHHHHHHHHHHHHH
Confidence            458899999999999999999998 46677765432   2233333332 222 22  1112345666777777776558


Q ss_pred             HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .++.+++.++++.+++.++.+.++.|++..++++++++|++      +..+++|.++.+.|+.+..
T Consensus       227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~------~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPL------SFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999999999999999      6669999999999987765

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.81  E-value=1.5e-07  Score=87.76  Aligned_cols=137  Identities=13%  Similarity=0.182  Sum_probs=100.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCC-CCCCCchhHHHHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTA-SLPLFKFPVISRICFLSLVG   88 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~~~   88 (348)
                      .+.+.++.++++|+.+.++.|....+.-++...+++....+.+...+. .... +.+.. +....+.. ....+..++..
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t  266 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMI-GLVVEKNNPSVWIIHFDIT-LITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHH-HHHHccCCcccceeccchH-HHHHHHHHHHH
Confidence            377889999999999999999886333344455666666666665555 4442 22001 11112222 22344445545


Q ss_pred             HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .+++.++++++++.+++.+++..++.|++++++++++++|++      +..+++|.++.+.|+.+..
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~l------t~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSL------YLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHH
Confidence            678889999999999999999999999999999999999999      5569999999999998876

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.80  E-value=2.9e-06  Score=77.88  Aligned_cols=301  Identities=13%  Similarity=0.070  Sum_probs=177.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH----Hhh-ccCCCCCCCCchhHHHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP----FIF-RSNTASLPLFKFPVISRIC   82 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~   82 (348)
                      +-..+++.++++.++|+..+.-.|+.  +.-+ +|..+.  +.+. +...++.    .+. +.-.+.....+.+.+...+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~-wE~~W~--v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV--KKWS-WETMWS--VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc--CCCc-hhHHHH--HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            45679999999999999999999995  4333 222211  1111 1111101    010 1100111235677788889


Q ss_pred             HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhccc-ccccccchhhhHHHHHhhhceeEEEeeCc
Q 018934           83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLA-LSSLSTWAKIIGTLVSVSGAMLVVLYKGP  160 (348)
Q Consensus        83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~li~~~~g~  160 (348)
                      +.|++...++..++.++++.+.+.+..+ ..++-+...++..++++|=.+ ..++-......|+++.++|+.+.. ..|.
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s-~Ag~  156 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVG-RAGQ  156 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHH-Hhhh
Confidence            9999999999999999999999999887 469999999999999886320 111124456888999999998887 3111


Q ss_pred             cccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHH-------HHHhhhhh-hcCCchHHHHH---HHHHHHHH
Q 018934          161 TIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWY-------IIQQTQTM-KLYPAEFVVTL---LYCLFATI  229 (348)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~-~~~~~~~~~~~---~~~~~~~~  229 (348)
                      ..+..        .+....++.+...|..+++++.++++.|+       ... +... ...+ +.....   ..++++..
T Consensus       157 ~k~~~--------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~-~~a~~~g~~-~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        157 LKERK--------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMH-EAAAALGVD-PLYAALPSYVVIMGGGA  226 (345)
T ss_pred             hcccc--------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchh-hhhhhcCCC-chHHHHHHHHHHHHHHH
Confidence            10000        00000235677889999999999999998       444 2211 1122 222222   12223333


Q ss_pred             H-HHHHHHh---ccCCcccc--ccCCchhHHHH----HHHHHHHHHHHHHHHHHhhhcCCceEEee---ch-hhHHHHHH
Q 018934          230 I-SAPICFV---GESNLSAW--RLKPDIELASI----VYSAFFGLSFITVVHTFGLRMKGPVYTAI---FK-PLSIAIAA  295 (348)
Q Consensus       230 ~-~~~~~~~---~~~~~~~~--~~~~~~~~~~~----l~~~~~~~~~~~~l~~~a~~~~~~~~~~~---~~-~l~pv~a~  295 (348)
                      . ...++..   ..++....  ...+...+..-    ...|+ .=.+++.++..+.++.+......   +. .+.-+++.
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist  305 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN  305 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence            2 2333332   11111101  00011111222    23333 33456667777777776554444   44 66668899


Q ss_pred             HHHHHHhcCcch------hhhhhhHHHHHHhhhhheec
Q 018934          296 ITSFIFLSEALH------LGSVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       296 ~~~~~~~~e~~~------~~~~iG~~li~~g~~l~~~~  327 (348)
                      +++.+ +||.=+      ...++|.++++.|..+...+
T Consensus       306 lwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        306 LWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             Hhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            99995 999766      55689999999997776543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.67  E-value=7.2e-08  Score=74.85  Aligned_cols=107  Identities=15%  Similarity=0.261  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHH
Q 018934          222 LYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  301 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~  301 (348)
                      +....+.+..........+..+.++......+...+..|.+....++.+++++.++.++ .++++..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555553332111221122345666676776777899999999999995 88899999999999999999


Q ss_pred             hcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          302 LSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       302 ~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      ++|++++.+++|..++++|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999877543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.65  E-value=8.4e-08  Score=80.48  Aligned_cols=262  Identities=14%  Similarity=0.152  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHH
Q 018934           41 FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI  120 (348)
Q Consensus        41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i  120 (348)
                      +.+.+.+.+...+-++.+ -+.+ -     -..+.++.+..+...++-....+....+++|.++..-++..++..+.++.
T Consensus        38 flll~vQSlvcvv~l~iL-k~l~-~-----~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAy  110 (309)
T COG5070          38 FLLLAVQSLVCVVGLLIL-KFLR-L-----VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAY  110 (309)
T ss_pred             hHHHHHHHHHHHHHHHHH-HHHh-H-----hheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHh
Confidence            345566666555555444 2222 1     11123334444555555666666777899999999999999999999999


Q ss_pred             HHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 018934          121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISV  200 (348)
Q Consensus       121 ~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  200 (348)
                      ...+++|.|.      +-.....-++.+...+...  .+|....             .......+.|++++..-++.-|.
T Consensus       111 gEvl~Fgg~v------tsl~l~SFilMvlSS~va~--w~D~q~~-------------~~~~~~lN~GY~Wm~~Nclssaa  169 (309)
T COG5070         111 GEVLFFGGRV------TSLELLSFILMVLSSVVAT--WGDQQAS-------------AFKAQILNPGYLWMFTNCLSSAA  169 (309)
T ss_pred             hHHHHhcCcc------chhhHHHHHHHHHHHHHhc--cchhhHH-------------HHHhcccCCceEEEehhhHhHHH
Confidence            9999999988      5556666666665544433  1111000             01123456699999999999899


Q ss_pred             HHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCc-cccccCCch-hHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018934          201 WYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL-SAWRLKPDI-ELASIVYSAFFGLSFITVVHTFGLRM  277 (348)
Q Consensus       201 ~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~l~~~~~~~~~~~~l~~~a~~~  277 (348)
                      +...- |+..+-.+ ....-+++..+++..+++....++|+.. .......+. ...+...-|+ |++.--++-.++.|.
T Consensus       170 fVL~m-rkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrV  247 (309)
T COG5070         170 FVLIM-RKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRV  247 (309)
T ss_pred             HHHHH-HHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEee
Confidence            88777 55444333 3677889999999999888888876532 211111111 2223333344 666666677789999


Q ss_pred             CCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccc
Q 018934          278 KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  332 (348)
Q Consensus       278 ~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~  332 (348)
                      .+.+.-+++..+.-.-..+.|.++++|+.+...+....+=..+..++...+.+++
T Consensus       248 tSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         248 TSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             hhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999887776666555554444433

>TIGR00803 nst UDP-galactose transporter

Probab=98.61  E-value=3.8e-07  Score=79.66  Aligned_cols=211  Identities=12%  Similarity=0.052  Sum_probs=123.6

Q ss_pred             hhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccC---CCCCcc-c-cCCCCCCC
Q 018934          105 TLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS---TASIPA-Q-SLHWTPQS  179 (348)
Q Consensus       105 ~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~---~~~~~~-~-~~~~~~~~  179 (348)
                      .......+..++++++..+.+.+||.      +..++.+.++...|++...+.+.+....   ..+... + ++..+...
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~------~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~   78 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQV------TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL   78 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceee------ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence            33455567788888888888888877      4457888887777766433211110000   000000 0 00000011


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchH-HHHHHHHHHHHHHHHHHHHhccCCc-cccccCCchhHHHHH
Q 018934          180 TRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEF-VVTLLYCLFATIISAPICFVGESNL-SAWRLKPDIELASIV  257 (348)
Q Consensus       180 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  257 (348)
                      ..++...|....+.+..+-++..+.+ ++..|+.+... .-.......+.+.........+.+. ..+.  .-..+....
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~-e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  155 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYF-EKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG--FFIGYPTAV  155 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHH-HHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccC--cccCCchHH
Confidence            23456678887888888878888888 77666544111 1111112222222121111111111 1111  001112222


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhh
Q 018934          258 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  324 (348)
Q Consensus       258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~  324 (348)
                      +.-+++...+..+....+|+.++...+....++++++.+++++++||++++.+++|+.+++.|++++
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2333456677888889999999999999999999999999999999999999999999999997653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.61  E-value=1.7e-06  Score=70.76  Aligned_cols=136  Identities=21%  Similarity=0.343  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCC-CC--C-----Cchh
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSK------GMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTAS-LP--L-----FKFP   76 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~-~~--~-----~~~~   76 (348)
                      |.+.++.+.++.+...+..|..+++      ..++.++..+....+.+++.+. .... +..... ..  .     .+.+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPL-AFLLEGPQLSSFFSEIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhhHHHHhhhhhhcchHH
Confidence            4577889999999999999999855      7999999999999999999998 7765 221000 00  0     0335


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934           77 VISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (348)
Q Consensus        77 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  154 (348)
                      .+..++..|++....+...+..+++++|...+++.....+.+.++++++++|++      +..++.|+.+++.|+.+-
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~------t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI------TPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC------CHHHHHHHHHHHHHHhee
Confidence            566777777777999999999999999999999999999999999999999999      666999999999998653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.60  E-value=1.3e-06  Score=79.99  Aligned_cols=138  Identities=19%  Similarity=0.154  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHHHHHHHhh-ccCC--CCCCCCchhHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSY---FVFVFYSYAATTLVLLLLFPFIF-RSNT--ASLPLFKFPVISRICF   83 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p---~~~~~~r~~~~~l~l~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~   83 (348)
                      ..|.++++.++++|+...+..|... +..++   .....+-...+.+.+... .... ....  ......+.+.+..++.
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVA-SLILDGSATMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHH-HHHhcCchhhhhhhccCCHHHHHHHHH
Confidence            4689999999999999999999974 33332   233343444443333333 2222 1100  0002345677888889


Q ss_pred             HHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           84 LSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        84 ~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .|++. ...+.+++.++++.++++++.+..+.|++..++++++++|++      +..+++|..+.+.|+.+..
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~------~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERL------TGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHHHh
Confidence            99888 899999999999999999999999999999999999999999      6669999999999997665

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.51  E-value=8e-07  Score=81.42  Aligned_cols=138  Identities=19%  Similarity=0.221  Sum_probs=104.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--------CchhHH
Q 018934            9 NGALFTAMVAAECTIVGENIIFKLATSK--GMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL--------FKFPVI   78 (348)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~--------~~~~~~   78 (348)
                      +..|.+++++++++|+...+..|... +  +.+|.....+....+.+++.++ ....... .....        ......
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~-~~~~~~~-~~~~~~~~~~~~~~~~~~~  219 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPP-AFITEGP-PFLPHGFMQAISGVNVTKI  219 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHH-HHHHcch-HHHHHHHHHhhcccCchHH
Confidence            45688999999999999999999985 5  7999999999999999998888 6653110 10000        010111


Q ss_pred             HH-HHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           79 SR-ICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        79 ~~-~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .. .+..+... ...+.+.+.+++++++..+++.....|+++.++++++++|++      +..+++|..+.+.|+.+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~l------t~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKI------SPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCC------chhHHHHHHHHHHHHHHHH
Confidence            11 22333322 444567778999999999999999999999999999999999      5569999999999987654

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.47  E-value=7.1e-07  Score=68.80  Aligned_cols=68  Identities=12%  Similarity=0.004  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          258 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      ..++++.++++.++..++++.+.+.+.++..+.++++.+++++++||++++.+++|.+++++|+.+..
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34446788999999999999999999999999999999999999999999999999999999987764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.41  E-value=2.3e-06  Score=75.22  Aligned_cols=139  Identities=14%  Similarity=0.108  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc-cCCchhHHHHHHHHHHH
Q 018934          185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR-LKPDIELASIVYSAFFG  263 (348)
Q Consensus       185 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~  263 (348)
                      ..|.++++.|-+.|+......  +..+..+ +.++...+.+.+...+........+....++ ...+..+......+. -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~--kll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~-l   81 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYF--KLLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL-L   81 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHH--HHHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH-H
Confidence            359999999999999887776  6667777 8899999999988887776655543222222 123335555555555 4


Q ss_pred             HHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934          264 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       264 ~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  327 (348)
                      .+..+.+|.++.++.+..++|.-.++.|++.+++|.++++|+++..|++...+..+|+....+.
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999999999999998877653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.37  E-value=9.5e-06  Score=75.84  Aligned_cols=136  Identities=15%  Similarity=0.184  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC-CchhHHHHHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK-PDIELASIVYSAFFGLS  265 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~  265 (348)
                      -..+.+.--.+-..++... |...+..+.|.++..+++..+.+...+. +...... ..+.. ....+..++.+|++.. 
T Consensus        50 ~~~~~~~wy~~s~~~~~~n-K~vl~~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~llp~gl~~~-  125 (350)
T PTZ00343         50 LALLFLTWYALNVLYVVDN-KLALNMLPLPWTISSLQLFVGWLFALLY-WATGFRK-IPRIKSLKLFLKNFLPQGLCHL-  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHH-HHhCCCC-CCCCCCHHHHHHHHHHHHHHHH-
Confidence            3334443344445566777 8888888779999999999987765544 2222111 01111 2235667777787554 


Q ss_pred             HHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          266 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       266 ~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                      ..+...+.++++.+++.+.++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            4577777999999999999999999999999999999999999999999999999888763

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.34  E-value=5.6e-06  Score=75.30  Aligned_cols=132  Identities=10%  Similarity=0.013  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      .++.++.+++.++++.+....|..   +.+|...++.....-.+.-..+ ....++  .+ +. +.+..+..++.|++..
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~-~~~~~~--~~-~~-~~~~~~~~~~~Gi~~~  222 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIF-NLGHIL--AK-PL-KKYAILLNILPGLMWG  222 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHH-HHHHhc--cc-ch-HHHHHHHHHHHHHHHH
Confidence            679999999999999999999976   4888888666655222222222 111122  11 22 2334455566888889


Q ss_pred             HHHHHHHHhhc-ccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhh----hHHHHHhhhceeEE
Q 018934           90 FFRILGYTGIA-YSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKI----IGTLVSVSGAMLVV  155 (348)
Q Consensus        90 ~~~~~~~~al~-~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~  155 (348)
                      .++.+++.+.+ +.+++.++++.+..|+...+.+++++||+.+.+      ++    +|.++.+.|+.++.
T Consensus       223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            99999999999 999999999999999999999999999999554      67    99999999887765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.26  E-value=1.8e-05  Score=70.46  Aligned_cols=279  Identities=16%  Similarity=0.158  Sum_probs=157.7

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 018934            6 SYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS   85 (348)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   85 (348)
                      ..++..|.+..+...++.+.+..+-|+...+           ...     .   ..  |......+..  +  -..+..|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~-----~---~~--ra~~gg~~yl--~--~~~Ww~G   70 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA-----S---GL--RAGEGGYGYL--K--EPLWWAG   70 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh-----h---cc--cccCCCcchh--h--hHHHHHH
Confidence            3456667777777777777777777776411           100     0   11  2100100112  1  1345567


Q ss_pred             HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccC
Q 018934           86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (348)
Q Consensus        86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~  164 (348)
                      ++. .++..+-|.|+.+.|.+..+.+..++-+..++++..++|||+      ++...+|++++++|-.+++ ...|..+.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl------~~~g~lGc~l~v~Gst~iV-~haP~e~~  143 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKL------NLLGILGCVLCVVGSTTIV-IHAPKEQE  143 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHH------HHhhhhheeEEecccEEEE-EecCcccc
Confidence            777 888899999999999999999999999999999999999999      5559999999999999998 44443332


Q ss_pred             CCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC--chHHHHHHHHHHHHH-HHHH------HH
Q 018934          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP--AEFVVTLLYCLFATI-ISAP------IC  235 (348)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~------~~  235 (348)
                      ..+.....   .-- .+..++.-..+.+...      .++. -....++.  +.+........++.. ++..      +-
T Consensus       144 i~t~~el~---~~~-~~~~Fliy~~~iil~~------~il~-~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aik  212 (335)
T KOG2922|consen  144 IESVEEVW---ELA-TEPGFLVYVIIIILIV------LILI-FFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIK  212 (335)
T ss_pred             cccHHHHH---HHh-cCccHHHHHHHHHHHH------HHHh-eeecccccccceeehhhHhhhhcceeeeeHHHHHHHHH
Confidence            20000000   000 0111221111211111      1111 11111222  233333333333211 1100      00


Q ss_pred             HhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhh-HHHHHHHHHHHHhcCcch--h----
Q 018934          236 FVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL-SIAIAAITSFIFLSEALH--L----  308 (348)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l-~pv~a~~~~~~~~~e~~~--~----  308 (348)
                      ....++.+   ...+..|..++.+.. |...-..-.++|++..+++.++++.+. -..+++.-+.+++.|.-.  .    
T Consensus       213 lt~~g~~q---l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~  288 (335)
T KOG2922|consen  213 LTFSGNNQ---LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIA  288 (335)
T ss_pred             HHhcCCcc---cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            11111111   112344555544444 555556667799999999998877665 456677778888887433  3    


Q ss_pred             hhhhhHHHHHHhhhhheeccccc
Q 018934          309 GSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       309 ~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      ....|+..++.|+++....|+++
T Consensus       289 ~~~~Gf~ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  289 GELCGFVTIFLGIFLLHRTKDME  311 (335)
T ss_pred             HHHHhHHHhhheeeEeeeecccc
Confidence            35678899999999887655544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.25  E-value=3.2e-05  Score=69.86  Aligned_cols=132  Identities=17%  Similarity=0.214  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVF-YSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (348)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (348)
                      ..+..+.+.+.++|+.+....|...  ..++..... +..........+.   ....  .. .....+.+......|+++
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~-~~~~~~~~~~~~~~g~~~  224 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLF---FLSG--FG-APILSRAWLLLLYLGVFS  224 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHH---Hhcc--cc-ccCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999884  666666666 3333122222211   1111  11 234567788899999999


Q ss_pred             -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                       ..++.+++.+++..+++.++.+..+.|++..++++++++|++      +..++.|+++.+.|+.+..
T Consensus       225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~------~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         225 TGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPL------SPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHh
Confidence             679999999999999999999999999999999999999999      5569999999999987765

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.22  E-value=1.1e-05  Score=62.18  Aligned_cols=68  Identities=13%  Similarity=0.061  Sum_probs=60.1

Q ss_pred             HHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           82 CFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        82 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ...++++ ..+..++..+++..|.+.+..+.++.++++.+++++++|||+      +..+++|+.+.+.|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l------s~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV------SPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            3344455 889999999999999999999988999999999999999999      5569999999999997765

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.21  E-value=7e-07  Score=76.24  Aligned_cols=276  Identities=12%  Similarity=0.066  Sum_probs=181.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (348)
                      .++..++-++.|+....+..+.   +=.|.+.+.-.-+.+.++...+ .+. ..     |..+.+.+..-++.|++...+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv-~~~-~~-----p~~T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIV-FLF-VS-----PELTLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHH-hee-ec-----CccchhhHHHHHHhhhHhhhh
Confidence            4566788889999998877665   4456665554444444444433 332 22     556777788888888888999


Q ss_pred             HHHHHHhhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934           92 RILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA  170 (348)
Q Consensus        92 ~~~~~~al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~  170 (348)
                      +...+.+.++.+++.+..+.. ++-+-+-+++.+.++|=.+..+  -.....++++.+.|+.+-. .+++.         
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs-~~~~~---------  140 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTS-KQDRN---------  140 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEee-eeccc---------
Confidence            999999999999999999965 8889999999999999432211  1122455677777876666 22221         


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCc
Q 018934          171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPD  250 (348)
Q Consensus       171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (348)
                          ++...+.+....|....+.+.++|-.|.++. +...-+.-+...-....+..+++.+.   ...+.      ...+
T Consensus       141 ----nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~-~~f~v~g~saiLPqAiGMv~~ali~~---~~~~~------~~~~  206 (288)
T COG4975         141 ----NKEEENPSNLKKGIVILLISTLGYVGYVVLF-QLFDVDGLSAILPQAIGMVIGALILG---FFKME------KRFN  206 (288)
T ss_pred             ----cccccChHhhhhheeeeeeeccceeeeEeee-ccccccchhhhhHHHHHHHHHHHHHh---hcccc------cchH
Confidence                1112234456779999999999999997777 55542211233333344444444322   11111      0122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhhhh
Q 018934          251 IELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTV  324 (348)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~l~  324 (348)
                      .....-+.-|+.. +.+...+..+.++.+.++.=-+.-+.-+++.+=+.++++|+=+..++    +|..+++.|..+.
T Consensus       207 K~t~~nii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         207 KYTWLNIIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             HHHHHHHhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            2223333445434 35778888888888888888888888899999999999999887754    6778888775443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.08  E-value=0.0002  Score=65.81  Aligned_cols=141  Identities=16%  Similarity=0.045  Sum_probs=109.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS   85 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g   85 (348)
                      .+..+|-+.++.+++++|.+.+.-+... ++.++.++..+--+++.++..+. +... +++.+. ...+++....++..+
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq-~~ile~~~i~~-~~w~~~~~~~~v~~~  240 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQ-LAILERSGIES-IHWTSQVIGLLVGYA  240 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHH-HHheehhhhhc-cCCChhhHHHHHHHH
Confidence            4678999999999999999999999996 77889998888888888887766 5544 442222 223444444444444


Q ss_pred             HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL  156 (348)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  156 (348)
                      ++....+.+.-..+++++++...+=.-+..++..++..+++++++      ++..++|.++.++|.++...
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~------~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKF------SWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccc------cHHHHHHHHHHHHHhheEEc
Confidence            444677777788899999987777677899999999999999999      66699999999999988873

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.03  E-value=9.4e-05  Score=65.47  Aligned_cols=135  Identities=13%  Similarity=0.043  Sum_probs=101.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (348)
                      .+..|+.+.+++.++.+..+..+.|..   +.+|....+-..+.-.+.-.++ ....++     + ...+..+.-++.|+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~-~~~~~~-----~-~~~k~~~~nil~G~  203 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIF-NLFSKK-----P-FFEKKSWKNILTGL  203 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHH-hhcccc-----c-ccccchHHhhHHHH
Confidence            355789999999999999988887775   6888887776655444444434 333222     1 12233566688899


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  153 (348)
                      +...++.+++.+.+....+.+-.+.++..+...+-+.+++||+-+.|+  -...+.|+++.+.|.++
T Consensus       204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhhc
Confidence            889999999999999999999999999999999999999999875543  34456777777777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.99  E-value=0.0002  Score=61.78  Aligned_cols=136  Identities=11%  Similarity=0.040  Sum_probs=112.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS   85 (348)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g   85 (348)
                      .-.-.|..+.+.+..+|+.+.+..|.. .+..|.-.-+..-+.++.++.+|+ ..-+ ..     -..++......+..+
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pi-g~~~ag~-----~l~~p~ll~laLgva  216 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPI-GAAQAGP-----ALFSPSLLPLALGVA  216 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhh-hhhhcch-----hhcChHHHHHHHHHH
Confidence            345678899999999999999999999 346666667788888999999999 7654 22     234566677788888


Q ss_pred             HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ++. .+.+.+=..+++..|...-+++.++.|.+.++.++++++|++      |..||.++...+.+..-..
T Consensus       217 vlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~l------s~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         217 VLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETL------TLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHhccc
Confidence            898 999999999999999999999999999999999999999999      5558999888877765333

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.97  E-value=2.3e-05  Score=60.84  Aligned_cols=71  Identities=14%  Similarity=0.195  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          259 SAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       259 ~~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      ..+++.++++.++..++|+.+.+.+-.+ .-+..+.+.+.++++++|++++.+++|..+|++|++......+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3455778899999999999999888666 4688899999999999999999999999999999988866543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.85  E-value=0.00012  Score=56.03  Aligned_cols=69  Identities=14%  Similarity=0.192  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934          260 AFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       260 ~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      .+++.++++.++..++++.+.+.+-.+ .-+..+.+.+.++++++|++++.+++|..+|++|+++....+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            355778899999999999999888555 557888899999999999999999999999999999886544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.78  E-value=0.00046  Score=63.22  Aligned_cols=128  Identities=13%  Similarity=0.120  Sum_probs=95.4

Q ss_pred             HHHHHHhhhhhhcCC-c--hHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018934          200 VWYIIQQTQTMKLYP-A--EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  276 (348)
Q Consensus       200 ~~~v~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~  276 (348)
                      .+.+.+ ++..++.. .  +..++..++....+...+.......+.  .   ....+......++ ...++..+-+.+++
T Consensus        14 ~~g~~q-E~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al~   86 (303)
T PF08449_consen   14 SYGILQ-EKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHH-HHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            344556 66665544 3  678888888887777666554443111  1   2223444445554 66678899999999


Q ss_pred             cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccccc
Q 018934          277 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG  334 (348)
Q Consensus       277 ~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~  334 (348)
                      +++...-.+.....|+...++++++++++.+..++.+..++.+|+.+....+.+++++
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            9999999999999999999999999999999999999999999999988765544443

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.62  E-value=0.00054  Score=52.28  Aligned_cols=65  Identities=14%  Similarity=0.156  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      +.+.++++.+...++|+.+...+ ++..-+..+.+.+.++++++|++++.+++|.++|+.|+....
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            44667899999999999998887 455567888889999999999999999999999999988763

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.62  E-value=0.00019  Score=56.77  Aligned_cols=116  Identities=14%  Similarity=0.193  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HH
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SF   90 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   90 (348)
                      +++.+++..++-+..-++.|..+ +..+..+.... .      + .. ......            ....+..|+.. ..
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~------~-~~-~~~~~~------------p~~~i~lgl~~~~l   60 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F------I-AA-LLAFGL------------ALRAVLLGLAGYAL   60 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H------H-HH-HHHHhc------------cHHHHHHHHHHHHH
Confidence            56667777777777778888886 33333221111 0      0 01 000011            12246667777 99


Q ss_pred             HHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHH--HhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           91 FRILGYTGIAYSSPTLASMIGNLTPGFTFILAII--FRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        91 ~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +..++..+++..+++.+..+.+..+.++.+.++.  ++||++      +..+++|+++.+.|++++.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l------s~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF------SLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999888888885  899999      5569999999999998876

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.57  E-value=0.0009  Score=53.64  Aligned_cols=132  Identities=14%  Similarity=0.106  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  266 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  266 (348)
                      ..++++.+++.-+...... .++.++.++|.....+.+..+.+.+.....+.++.  ......+..|+.  +.|-+.+..
T Consensus         2 ~~lla~~aG~~i~~q~~~N-~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~--~lGG~lG~~   76 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFN-GQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWA--YLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHH--hccHHHHHH
Confidence            3567888899999999999 99988887799999999999999888877776653  222112223333  334445666


Q ss_pred             HHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHH----HhcCcchhhhhhhHHHHHHhhhh
Q 018934          267 ITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFI----FLSEALHLGSVIGGVITCVGFYT  323 (348)
Q Consensus       267 ~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~----~~~e~~~~~~~iG~~li~~g~~l  323 (348)
                      ...+.....++.+++..... ..-+.+.+.++|.+    .-.+++++.+.+|.+++++|+++
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            67777788899988877544 45567777888886    23578999999999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.56  E-value=0.00053  Score=52.00  Aligned_cols=66  Identities=12%  Similarity=0.167  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  326 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~  326 (348)
                      +++.++++.+...++|+.+...+ ++..-+..+.+.+.++++++|++++.+++|..+|++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            44678899999999999998887 4555588899999999999999999999999999999888754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.54  E-value=0.00021  Score=53.66  Aligned_cols=65  Identities=18%  Similarity=0.285  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934          263 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       263 ~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  327 (348)
                      +.+++|.+...++|+.+...+ ++..-...+.+.+.++++|+|+.++.+++|..++++|++.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            567889999999999988777 56677888889999999999999999999999999999887654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.50  E-value=0.00042  Score=63.11  Aligned_cols=121  Identities=17%  Similarity=0.223  Sum_probs=88.5

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCc-hHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHH
Q 018934          181 RSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPA-EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYS  259 (348)
Q Consensus       181 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  259 (348)
                      +.++.+|..+++.++++.+....++ |+..+|.+. +..-.  ...      .+.          +   .++.|    +.
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lq-k~~~~r~~~~~~~~~--~~~------~~~----------l---~~~~W----~~   55 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQ-KKSHLRLPRGSLRAG--SGG------RSY----------L---RRPLW----WI   55 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccccccc--chh------hHH----------H---hhHHH----HH
Confidence            3567889999999999999999999 776655541 11000  000      000          0   11123    22


Q ss_pred             HHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934          260 AFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       260 ~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  327 (348)
                      |....+++..+...++...+++.++++..+..++..+++..+++|+++..+++|+++++.|..+....
T Consensus        56 G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   56 GLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            23344556677778899999999999999999999999999999999999999999999997766543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.49  E-value=6.1e-05  Score=65.34  Aligned_cols=139  Identities=14%  Similarity=0.136  Sum_probs=95.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHH
Q 018934          182 SRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAF  261 (348)
Q Consensus       182 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  261 (348)
                      +...+|..+.-.+ .++....+.. ++..+..  |.+..-..++.-.+...|-.+..-..  .+-+.....|+  +.=|+
T Consensus        34 d~p~~gl~l~~vs-~ff~~~~vv~-t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~  105 (346)
T KOG4510|consen   34 DKPNLGLLLLTVS-YFFNSCMVVS-TKVLEND--PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF  105 (346)
T ss_pred             CCCccCceehhhH-HHHhhHHHhh-hhhhccC--hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh
Confidence            3456677777777 7777777777 6666544  44444444444444444433222221  12211222332  22233


Q ss_pred             HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                       .+..+..+.+|++++.+-+.++++....|++++++++.+++|+.++...+|..+.+.|+++..+..-
T Consensus       106 -mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  106 -MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             -hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence             3446778888999999999999999999999999999999999999999999999999999887543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.37  E-value=0.031  Score=50.92  Aligned_cols=302  Identities=13%  Similarity=0.048  Sum_probs=177.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCCCCchhHHHHHHHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSN-TASLPLFKFPVISRICFLSL   86 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~   86 (348)
                      .-..+++...+..++-+..++-.|+.  ++-+=...-.....++.+++-.+.+.+.-++ .+.....+...+....+.|+
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            35678899999999999999999998  5555444444444455444333312221221 01112345567888889999


Q ss_pred             HHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhc--ccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMEN--LALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM  163 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~--~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~  163 (348)
                      +-..+...|=.+++|...+...-+ ..+.-.+-.++-.++.++-  + ..++.....+.|+++.++|+.+.. ..|..-+
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g-~AG~~Ke  159 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICG-KAGSMKE  159 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHh-HHHHhhh
Confidence            999999999999999999988544 5677777777766665431  1 223336678999999999998887 3332110


Q ss_pred             CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh--h----hcCC-chH----HHHHHHHHHHHHHHH
Q 018934          164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQT--M----KLYP-AEF----VVTLLYCLFATIISA  232 (348)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~--~----~~~~-~~~----~~~~~~~~~~~~~~~  232 (348)
                      .         +.+.+.++.+...|.++++.++++.|.++.-. ..-  .    .+.. +|.    ......+..+.+.-.
T Consensus       160 ~---------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~-~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~  229 (344)
T PF06379_consen  160 K---------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL-DAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL  229 (344)
T ss_pred             h---------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH
Confidence            0         00112345677889999999999988887665 211  1    1111 122    233344455566666


Q ss_pred             HHHHhccC---CccccccC--Cc----hhHHHHHHHHHHHHHHHHHHHHHhhhcCCce----EEeechhhHHHHHHHHHH
Q 018934          233 PICFVGES---NLSAWRLK--PD----IELASIVYSAFFGLSFITVVHTFGLRMKGPV----YTAIFKPLSIAIAAITSF  299 (348)
Q Consensus       233 ~~~~~~~~---~~~~~~~~--~~----~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~----~~~~~~~l~pv~a~~~~~  299 (348)
                      ..+++...   +...+...  ..    .....-+..|++-. ..+.+|-.+-.+.+..    --.+.+.+..+++-+++.
T Consensus       230 ~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy-~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl  308 (344)
T PF06379_consen  230 IYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWY-SQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL  308 (344)
T ss_pred             HHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence            66665321   11111100  11    12222223333332 3444454555555543    224566677777888887


Q ss_pred             HHhcC------cchhhhhhhHHHHHHhhhhhe
Q 018934          300 IFLSE------ALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       300 ~~~~e------~~~~~~~iG~~li~~g~~l~~  325 (348)
                      + ++|      +.-..-++|+++++.++.++-
T Consensus       309 ~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG  339 (344)
T PF06379_consen  309 I-LKEWKGASKKTIRVLVLGIAVLILSVVIVG  339 (344)
T ss_pred             H-HHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence            7 555      333445788888888876653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.28  E-value=0.0034  Score=50.43  Aligned_cols=140  Identities=9%  Similarity=0.079  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHH
Q 018934          185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGL  264 (348)
Q Consensus       185 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  264 (348)
                      ....+.++.++++-.+..... .++.+..++|.....+.+..+.+.+..+.++.+.+ ..+....+..|+.... |+ ..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN-~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~~G-G~-lG   79 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAIN-GRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAWIG-GL-LG   79 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHH-HHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHHHc-cc-hh
Confidence            346778888999999998888 89988888899999999999999888887775443 2222222223333322 22 22


Q ss_pred             HHHHHHHHHhhhcCCceE-EeechhhHHHHHHHHHHHHhc----CcchhhhhhhHHHHHHhhhhheecc
Q 018934          265 SFITVVHTFGLRMKGPVY-TAIFKPLSIAIAAITSFIFLS----EALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       265 ~~~~~l~~~a~~~~~~~~-~~~~~~l~pv~a~~~~~~~~~----e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      .+-...-....++.+++. ......-+.+.+.+.|.+=+.    .+++...++|.+++++|+++..+.+
T Consensus        80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            222222234455555544 456667778888888888775    6889999999999999976665543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.23  E-value=0.0047  Score=47.13  Aligned_cols=68  Identities=12%  Similarity=0.011  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccChhhHH-hhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934           81 ICFLSLVGSFFRILGYTGIAYSSPTLAS-MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (348)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~-~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  154 (348)
                      ....-.+...+.+++..+++..|.+.+- +.....-+.+.+.+.+++||++      ++.++.|+.+.+.|++.+
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~------~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL------NRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHh
Confidence            3344444478889999999999999994 4467999999999999999999      666999999999998764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.23  E-value=0.0088  Score=47.94  Aligned_cols=129  Identities=17%  Similarity=0.228  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 018934           14 TAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR   92 (348)
Q Consensus        14 ~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   92 (348)
                      +..+.+-.+-+....++-.. .+..+ |...++.-+..+++++..+ ....++  +..+..+ +..++..+-|+++...-
T Consensus         4 lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~-~~~~~~--~~~~~~~-~~p~w~~lGG~lG~~~V   78 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLII-LLITGR--PSLASLS-SVPWWAYLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHH-HHHhcc--cccchhc-cCChHHhccHHHHHHHH
Confidence            44555666666666666666 35555 9999999999999999888 666433  1212222 33455566999999999


Q ss_pred             HHHHHhhcccChhhHHhhhhh-hHHHHHHHHHH--H--hhhcccccccccchhhhHHHHHhhhcee
Q 018934           93 ILGYTGIAYSSPTLASMIGNL-TPGFTFILAII--F--RMENLALSSLSTWAKIIGTLVSVSGAML  153 (348)
Q Consensus        93 ~~~~~al~~~~~~~a~~l~~~-~P~~~~i~a~l--~--~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  153 (348)
                      .+..+..+..+++.+..+.-+ +-+...++-++  +  -|+++      +..+..|+++.+.|+.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~------~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF------SLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC------CHHHHHHHHHHHHHHhC
Confidence            999999999999999888665 44445555552  2  23444      77799999999999853

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.14  E-value=0.0015  Score=50.79  Aligned_cols=67  Identities=18%  Similarity=0.203  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +.-++.+.+.+++..++++.|.+.+-.+ ....-+.+.+++.++++|++      +..+++|+.+.+.|++.+-
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~------s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL------SLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHhh
Confidence            3333348899999999999999999666 57999999999999999999      6669999999999998876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.11  E-value=0.0028  Score=48.51  Aligned_cols=110  Identities=15%  Similarity=0.124  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018934           17 VAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGY   96 (348)
Q Consensus        17 ~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   96 (348)
                      ++..++||...++.|... ++.++..-.. |..-....  .+     +         +    +++.+-=.++-.+...|+
T Consensus         2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~--Ll-----~---------n----~~y~ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKF--LL-----L---------N----PKYIIPFLLNQSGSVLFF   59 (113)
T ss_pred             eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHH--HH-----H---------h----HHHHHHHHHHHHHHHHHH
Confidence            456789999999999994 5555544331 21111111  01     1         1    222333334577888899


Q ss_pred             HhhcccChhhHHhhh-hhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934           97 TGIAYSSPTLASMIG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (348)
Q Consensus        97 ~al~~~~~~~a~~l~-~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  154 (348)
                      +.+...+.+.+..+. ++.=++|++.++++.+|..      ++..+.|+.+.+.|+.+.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~------~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVI------SRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCccc------chhHHHHHHHHHcCeeee
Confidence            999999999998885 7899999999988777766      445899999999998765

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.09  E-value=0.0025  Score=47.35  Aligned_cols=57  Identities=16%  Similarity=0.211  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCceEEee-chhhHHHHHHHHHHHHhcCcchhhhhhhHHHH
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYTAI-FKPLSIAIAAITSFIFLSEALHLGSVIGGVIT  317 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~~~-~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li  317 (348)
                      +.+.++++.++.+++|+.+.+.+-+ ..-+..+...+.+.+++||++++.+++|..+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4477889999999999999999855 45589999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.09  E-value=0.0016  Score=49.00  Aligned_cols=66  Identities=12%  Similarity=0.059  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHhhcccChhhH-HhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           84 LSLVGSFFRILGYTGIAYSSPTLA-SMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        84 ~g~~~~~~~~~~~~al~~~~~~~a-~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      .-++...++.++..++++.|.+.+ ++......+.+.+.+++++||++      +..+++++.+.+.|++.+-
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l------~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL------SLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC------CHHHHHHHHHHHHHHHHhh
Confidence            333348889999999999999999 55577999999999999999999      6669999999999987653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.02  E-value=0.00067  Score=58.35  Aligned_cols=138  Identities=12%  Similarity=0.053  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  266 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  266 (348)
                      ..++++.=+++|+..-... .+..   ++|.+-..-..+.+.++...+.++..+ ..     ....+..-...|.+.+ +
T Consensus         3 ~~liaL~P~l~WGsip~v~-~k~G---G~p~qQ~lGtT~GALifaiiv~~~~~p-~~-----T~~~~iv~~isG~~Ws-~   71 (288)
T COG4975           3 DLLIALLPALGWGSIPLVA-NKFG---GKPYQQTLGTTLGALIFAIIVFLFVSP-EL-----TLTIFIVGFISGAFWS-F   71 (288)
T ss_pred             hHHHHHHHHHHhcccceee-eecC---CChhHhhhhccHHHHHHHHHHheeecC-cc-----chhhHHHHHHhhhHhh-h
Confidence            5678888899999886655 3332   235554444444444444444333221 11     2223444445556555 6


Q ss_pred             HHHHHHHhhhcCCceEEeechh-hHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhhhheeccccccccC
Q 018934          267 ITVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLWGKANDEAGK  335 (348)
Q Consensus       267 ~~~l~~~a~~~~~~~~~~~~~~-l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~l~~~~~~~~~~~~  335 (348)
                      ++...+++++..+.+++.++.. .+.+-+.+++++++||..++.+.    +.+++++.|+++..+.++.+++++
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~  145 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE  145 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc
Confidence            8999999999999999988765 67777899999999999998865    457788889888877665444433

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.99  E-value=0.023  Score=52.50  Aligned_cols=146  Identities=11%  Similarity=-0.037  Sum_probs=95.3

Q ss_pred             CchhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHH-HHHHHHHHhh-ccCCCC----CC
Q 018934            8 KNGALFTAMVAAECTIVGEN-------IIFKLATSKGMSYFVFVFYSYA---ATTL-VLLLLFPFIF-RSNTAS----LP   71 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~-------~~~k~~~~~~~~p~~~~~~r~~---~~~l-~l~~~~~~~~-~~~~~~----~~   71 (348)
                      +..|+.+.++++.+..+..+       +..+.....+.++.....-.++   .+.. .-..+ +.+. +++++.    .+
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~-~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGF-CFIRLAKNKDLSLKADF  249 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCcccchhc
Confidence            45789999999999999988       5555543456777766665555   3333 33334 3432 221121    01


Q ss_pred             CCc----hhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHh---hh-hhhHHHHHHHHHHHhhhcccccccccchhhhH
Q 018934           72 LFK----FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASM---IG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIG  143 (348)
Q Consensus        72 ~~~----~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~---l~-~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g  143 (348)
                      ..+    .++.....+.|++....+.++..+-...+.+.+..   +. ++.-++..+-+. ++||+-+...|..+..+.|
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            112    23444457777777888899999988887666655   65 455566666666 6999887544557777999


Q ss_pred             HHHHhhhceeEE
Q 018934          144 TLVSVSGAMLVV  155 (348)
Q Consensus       144 ~~l~~~Gv~li~  155 (348)
                      +++.+.|++++.
T Consensus       329 ~vliI~g~~lig  340 (345)
T PRK13499        329 CVVIILAANIVG  340 (345)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988776

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.96  E-value=0.0037  Score=47.41  Aligned_cols=67  Identities=12%  Similarity=-0.031  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ..-++...+.+++..+++..|.+.+-.+ ....-+.+.+.+.+++||++      ++.++.|+.+.+.|++.+-
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~------~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA------SPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHhhh
Confidence            3333348899999999999999999544 67999999999999999999      6669999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.89  E-value=0.0034  Score=48.11  Aligned_cols=61  Identities=20%  Similarity=0.193  Sum_probs=55.0

Q ss_pred             HHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 ~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ..+..++..+++..|.+.+-.+ ....-+.+.+++++++||++      ++.++.|+.+.+.|++.+-
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~------~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            7888889999999999999666 66899999999999999999      6679999999999998875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.83  E-value=0.0032  Score=55.65  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934          256 IVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       256 ~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      ...-++ ...+...+.+.++++.+|+...++..++.++++++++++++++++..||++..+.++|+.+........
T Consensus        20 ~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   20 LAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            333333 566788889999999999999999999999999999999999999999999999999999987765554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.73  E-value=0.029  Score=49.62  Aligned_cols=137  Identities=15%  Similarity=0.062  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (348)
                      |+++++.+.+++|.+++-.|..  +.-|++.+.++......+.-+++ ... +.  .  ++    -....++.|.+.+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v-~~~-~~--~--p~----f~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVV-NLI-LG--F--PP----FYPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHH-HHh-cC--C--Cc----ceeHHHhhhhhhhcC
Confidence            4678899999999999999998  45688888888887777766655 554 22  1  22    245567777888999


Q ss_pred             HHHHHHhhcccChhhHHhhhhhhHHHHHHH-HHH-HhhhcccccccccchhhhHHHHHhhhceeEEEeeCcc
Q 018934           92 RILGYTGIAYSSPTLASMIGNLTPGFTFIL-AII-FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT  161 (348)
Q Consensus        92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~-a~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~  161 (348)
                      +.+..-.++..+.+.+..+-++.-+.+--. +.+ +++++.+.. +..+...+|++++++|..+..+-+.+.
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCC
Confidence            999999999999999999877655544433 322 343332221 237788999999999999888655444

The region concerned is approximately 280 residues long.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.29  E-value=0.011  Score=53.99  Aligned_cols=140  Identities=13%  Similarity=0.165  Sum_probs=109.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHHHH-HHHHHhhccCCC---CCCCCchhHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLAT---SKGMSYFVFVFYSYAATTLVLL-LLFPFIFRSNTA---SLPLFKFPVISR   80 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~---~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~~---~~~~~~~~~~~~   80 (348)
                      -+..|....+.+.+..+...++.|..+   ....++.....+..-.+...++ |+ ......+..   .....+.. ...
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~-~~~~~~~~~~~~~~~~~~~~-~~~  237 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPF-LDYVEGNKFVGFLTAPWFVT-FLI  237 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcch-Hhhhcccceeeeeccccchh-hHH
Confidence            467899999999999999999999998   3359999988888888888888 77 555311001   10122333 334


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ..+..++....+...|..+..++|-.-++....-=.++...++++++|++      +..+..|.+++++|+.+-.
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pv------t~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPV------TFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCC------chhhHHHHHHHHHHHHHHH
Confidence            44444777888999999999999999999999888889999999999988      5669999999999987643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.28  E-value=0.2  Score=45.92  Aligned_cols=143  Identities=13%  Similarity=0.029  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCC---chHHHHHHHHHHHHHHHHHHHHhccCC----c-cc---cccCCchhHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGESN----L-SA---WRLKPDIELAS  255 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~---~~~~~~~~~~~  255 (348)
                      =....+...+.++...... |...++.+   .|.+.....-++-.++.....+..++.    . ..   +....+.+...
T Consensus        16 k~~~l~~~t~~~~~l~l~l-~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   16 KYLSLIVLTAQNTALTLLL-RYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHhhHHHHH-HHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3344444444555555554 33333322   356666666666566555555544311    0 00   00001111122


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934          256 IVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       256 ~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      +..-+. ...+-..+++.+.++.+|+...+...+..+.++++.+++++++.+.+||....+...|+.+.......+
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            222222 444555688899999999999999999999999999999999999999999999999999988544443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.10  E-value=0.025  Score=43.31  Aligned_cols=61  Identities=13%  Similarity=0.093  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHhhhcCCceEEeech-hhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934          263 GLSFITVVHTFGLRMKGPVYTAIFK-PLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  323 (348)
Q Consensus       263 ~~~~~~~l~~~a~~~~~~~~~~~~~-~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l  323 (348)
                      ....+-..|++.+.+.+-+.+.++. .+.-+++++.++++.+|..++..++|+.+|++|+.+
T Consensus        50 lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   50 LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3345677888899999999999995 889999999999888888899999999999999765

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.09  E-value=0.023  Score=42.18  Aligned_cols=54  Identities=13%  Similarity=0.016  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHH
Q 018934           87 VGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLV  146 (348)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l  146 (348)
                      +.+.+.+++..++++.|.+.+-.+ ..+..+.+.+.+..++||++      +..++.|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~------s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL------SLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHhheee
Confidence            338888999999999999999554 67999999999999999999      5558988875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.91  E-value=0.24  Score=39.97  Aligned_cols=137  Identities=12%  Similarity=0.031  Sum_probs=89.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGS   89 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (348)
                      ...+..+.+-.+-.....++-......-+|....+.-+..+.+.+..+ .... ++  .. ....++..++.++-|+++.
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l-~l~~~~~--~~-~a~~~~~pwW~~~GG~lGa   80 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLIL-LLIKQGH--PG-LAAVASAPWWAWIGGLLGA   80 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH-HHHhcCC--Cc-hhhccCCchHHHHccchhh
Confidence            344455555566666666665553233359999999999999998888 6654 32  22 2233555777888888888


Q ss_pred             HHHHHHHHhhcccChhhHHhhhhh-hHHHHHHHHHH-HhhhcccccccccchhhhHHHHHhhhceeE
Q 018934           90 FFRILGYTGIAYSSPTLASMIGNL-TPGFTFILAII-FRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (348)
Q Consensus        90 ~~~~~~~~al~~~~~~~a~~l~~~-~P~~~~i~a~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  154 (348)
                      .+-+..........++....+.-. +-+...++-.+ +++++.   .+.+..++.|+++.+.|+.++
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~---~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPK---RPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCc---CCCCHHHHHHHHHHHHHHHHh
Confidence            888888888888888877666544 33344333331 122222   245889999999999995443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.86  E-value=0.1  Score=47.98  Aligned_cols=139  Identities=14%  Similarity=0.103  Sum_probs=107.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHHHh-h--ccCCCCCCCCchhHHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLATSK---GMSYFVFVFYSYAATTLVLLLLFPFI-F--RSNTASLPLFKFPVISRI   81 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~-~--~~~~~~~~~~~~~~~~~~   81 (348)
                      +...|-++.++.+++++....+.|.-..+   .++-..+-.+--++..++++|. .+. .  +.  ++....+..+...+
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~-l~iL~~~~~--e~F~lP~~~q~~~v  320 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPP-LIILDFFGE--ERFELPSSTQFSLV  320 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHH-HHHHHHhcc--CcccCCCCceeEee
Confidence            45789999999999999999999988622   2555666666667777777766 433 2  33  44334445567788


Q ss_pred             HHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           82 CFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        82 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ++.++++ +++.+++..|.-.+++-.+++-...+.-..++.-.++.+.++      +...++|.+..++|-+++.
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~------S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP------SALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHhhee
Confidence            8899999 999999999999999999998888666666677777766766      7789999999999988887

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.41  E-value=0.01  Score=53.36  Aligned_cols=129  Identities=18%  Similarity=0.251  Sum_probs=93.5

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHH
Q 018934          181 RSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSA  260 (348)
Q Consensus       181 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  260 (348)
                      ..++.+|..+++.+.++.+...++. |+..+|.. .   ..               .... ......    .....-+.|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilk-Kkgl~r~~-~---~~---------------~ra~-~gg~~y----l~~~~Ww~G   70 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILK-KKGLKRAG-A---SG---------------LRAG-EGGYGY----LKEPLWWAG   70 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhh-HHHHHHHh-h---hc---------------cccc-CCCcch----hhhHHHHHH
Confidence            4567788899999988888887777 77665544 1   00               0000 000100    011122566


Q ss_pred             HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccccc
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG  334 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~  334 (348)
                      ++..+++-..-+.+....+++.++++..++.+..++++..+++|.++....+|+++.++|..+......++++.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            67778888888889999999999999999999999999999999999999999999999977776544444433

>TIGR00803 nst UDP-galactose transporter

Probab=95.08  E-value=0.31  Score=42.32  Aligned_cols=67  Identities=10%  Similarity=0.104  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934           81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (348)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  153 (348)
                      .+...++......+....++|.++..-+....+.++++.+++.++++|++      +..++.|+.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~l------s~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKI------SSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc------cHHHHHHHHHHHeeeEe
Confidence            33444445777788999999999999999999999999999999999999      66699999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.20  E-value=0.53  Score=41.67  Aligned_cols=127  Identities=9%  Similarity=0.090  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCC-ccccccCCchh-----HHHHHHHH
Q 018934          187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIE-----LASIVYSA  260 (348)
Q Consensus       187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~l~~~  260 (348)
                      |.+.++.|+++++...+=. |+....  |++....+++....+.......+.+.+ ...+.......     ...+-.+-
T Consensus         1 G~~a~~va~~~fGs~~vPv-K~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~   77 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPV-KKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIK   77 (254)
T ss_pred             CchhHHHHHHHhcccceee-EeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhh
Confidence            4566788888888775555 444322  577776666665555555554444331 11111111000     01111111


Q ss_pred             HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHH-HhcCcc-----hhhhhhhHHHHHHhhhhheeccccc
Q 018934          261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI-FLSEAL-----HLGSVIGGVITCVGFYTVLWGKAND  331 (348)
Q Consensus       261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~-~~~e~~-----~~~~~iG~~li~~g~~l~~~~~~~~  331 (348)
                      .++.++++.+|.               ....+.+.+.+.+ +||+.+     +.+.++|.+++++|..+...-|.++
T Consensus        78 ~iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   78 TIGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            123355555554               2455666676654 455422     3668999999999988776544433

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.89  E-value=0.5  Score=42.71  Aligned_cols=141  Identities=20%  Similarity=0.225  Sum_probs=105.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCCCCchhHHHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRS----NTASLPLFKFPVISRIC   82 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~   82 (348)
                      -...|+.++....+.-+......|+.. ..+.+.+.+.++..+.+.+.+... .+...+    ......-.....+....
T Consensus       154 f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~-~~~~ge~~~l~~~~~~~~~~~~~~~~~  232 (314)
T KOG1444|consen  154 FNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLIL-SFITGELDALSLNFDNWSDSSVLVVML  232 (314)
T ss_pred             ecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHH-HHHhcchHHHHhhcccccchhHHHHHH
Confidence            345688888888888888888888887 346888999999999998888777 544311    00000011233466777


Q ss_pred             HHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           83 FLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +.++++..-.++.+.+.+..++...++.....-+.+.+...++.+++.      ++...+|+.++++|.++-.
T Consensus       233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~------~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPF------TFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCcee------chhhhHHHHHHhhhhhHHh
Confidence            778888999999999999999998888886666777777777778877      6679999999999987654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.28  E-value=0.18  Score=43.51  Aligned_cols=137  Identities=13%  Similarity=0.032  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCchhHHHHHHHHHHHH
Q 018934           12 LFTAMVAAECTIVGENIIFKLA-TSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS--LPLFKFPVISRICFLSLVG   88 (348)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~-~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~   88 (348)
                      |-+++++....=|.....-... .+..-+..++.++..+.+.+.+..- .+...+-++-  .-.+.+..++.+.+.++++
T Consensus       173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g-~lfTGElweF~yF~~RhP~~~~~l~l~ai~s  251 (337)
T KOG1580|consen  173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAG-LLFTGELWEFFYFVQRHPYVFWDLTLLAIAS  251 (337)
T ss_pred             HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhh-heehhhHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            4444444444444443332211 1122344556666666776666544 3332110000  0123455688899999999


Q ss_pred             HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           89 SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        89 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      ++++.+.|.-+.+-+|-.-+++..+--+|+.+.+.+++...+      +.++|+|..+.+.|..+=.
T Consensus       252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npl------s~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPL------SGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHHhhhHh
Confidence            999999999999999999999999999999999999999999      5559999999999876543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.14  E-value=0.43  Score=40.87  Aligned_cols=136  Identities=14%  Similarity=0.143  Sum_probs=100.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCC-CCCCCchhHHHHHHHHHHH
Q 018934           11 ALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTA-SLPLFKFPVISRICFLSLV   87 (348)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~~   87 (348)
                      .|+++|......-+..-...|+-. -.....++..++..+.+...++.+ .+.. .+..+ .....+.....+.++.|++
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~-s~~~edws~~n~annl~~d~l~am~ISgl~  233 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSF-SFLFEDWSPGNLANNLSVDSLMAMFISGLC  233 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHH-HHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence            355556555555555555556553 235677888999999999998887 7764 22000 0012344556788889999


Q ss_pred             HHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934           88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (348)
Q Consensus        88 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  153 (348)
                      .++-.+|.-++++-++.+.-+++..+.-.-.++.+.++++|+.      +...+.++++++....+
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~------nf~si~sillGflsg~i  293 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPV------NFLSIFSILLGFLSGAI  293 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCch------hHHHHHHHHHHHHHHHH
Confidence            9889999999999999999999999999999999999999988      66688888888765433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.73  E-value=1.7  Score=39.17  Aligned_cols=139  Identities=12%  Similarity=-0.021  Sum_probs=102.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCchhHHHHHHHH
Q 018934            8 KNGALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS--LPLFKFPVISRICFL   84 (348)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   84 (348)
                      +...|+.++.....+=|..+..=...+ ...+++.++.+.-.+..++.-... ........+.  .-+..++.++-+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            455677777777777777766666665 336999999999988888876655 4432221011  013466778889999


Q ss_pred             HHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (348)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  153 (348)
                      ..++..++.+.|+-++.-++-.-+++..+=-++...++.+.++.++      ++.+|.|+.+.+.|..+
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~------s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPL------SSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCcc------chhhccCeeeehHHHHH
Confidence            9999888888888887776666677778888899999999999999      66689999888887654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=89.83  E-value=1.8  Score=39.71  Aligned_cols=142  Identities=11%  Similarity=0.104  Sum_probs=80.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHh--ccCCccc-cccCCchhHHHHHHH
Q 018934          183 RWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFV--GESNLSA-WRLKPDIELASIVYS  259 (348)
Q Consensus       183 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~  259 (348)
                      +-..|.++..+++++.+.+++=. |+. |+-+  .|.......+-+.+..|....  .-++... ....+...+......
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~-kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPF-KKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccch-hhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            45679999999999999987776 554 3333  333333333323333333222  2222211 122233344444555


Q ss_pred             HHHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcC-------cchhhhhhhHHHHHHhhhhheeccc
Q 018934          260 AFFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSE-------ALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       260 ~~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e-------~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      |++-. ++-..|-.++|+++.+.. ++..-+..+++.++--++.|+       +-....++|.++.++|+.+.-+.-.
T Consensus        80 G~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   80 GVLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            55443 677788888999887654 333444455555554454432       2234578999999999888765433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.55  E-value=0.21  Score=41.78  Aligned_cols=62  Identities=10%  Similarity=0.115  Sum_probs=57.1

Q ss_pred             HHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934          266 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  327 (348)
Q Consensus       266 ~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~  327 (348)
                      .+.++|..++++.+|+.++.+..-.-.+..+++++++++++..-.++...+.+.|+++..+.
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            46778889999999999999999999999999999999999999999999999998888753

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=86.21  E-value=0.62  Score=41.36  Aligned_cols=64  Identities=14%  Similarity=0.159  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934          262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  325 (348)
Q Consensus       262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~  325 (348)
                      +|-..+-.+.+.++....++...++.-...++..+++..+++.+++..+|+|+..+.+|.+.+-
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg  157 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG  157 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence            3777888888899999999998899999999999999999999999999999999999977764

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=84.25  E-value=16  Score=33.26  Aligned_cols=68  Identities=16%  Similarity=0.206  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      +++++-..+-++++++++.+.-++.....+++..+++.++-=|.+++....=..+|-+|+++..++..
T Consensus        92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT  159 (349)
T KOG1443|consen   92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST  159 (349)
T ss_pred             hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence            37778888999999999999999999999999999999999999999999888899999998887544

>PRK02237 hypothetical protein; Provisional

Probab=83.27  E-value=5.1  Score=30.23  Aligned_cols=45  Identities=16%  Similarity=0.187  Sum_probs=37.7

Q ss_pred             eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934          284 AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       284 ~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      +.+.-...+.+.++.+.+-|++|+...++|.++.++|..+..+..
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            455556677888999999999999999999999999987775543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	348
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.03
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.66
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.13
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.12

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.03  E-value=1.6e-10  Score=91.10  Aligned_cols=72  Identities=14%  Similarity=0.175  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934          258 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  329 (348)
Q Consensus       258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~  329 (348)
                      .++++++++++.+|++++++.+++++.++ ..+.|+++.+++++++||++++.+++|+++|++|+++..+.++
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            46677899999999999999999999998 8999999999999999999999999999999999998876443

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.66  E-value=3.5e-08  Score=75.01  Aligned_cols=71  Identities=14%  Similarity=0.180  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934          258 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  328 (348)
Q Consensus       258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~  328 (348)
                      ..++++.++++.++.+++|+.+.+.+.++ ..+.|+++.+++++++||++++.+++|..+|++|+++....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45666888999999999999999999888 899999999999999999999999999999999999886543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.13  E-value=5e-06  Score=62.97  Aligned_cols=67  Identities=18%  Similarity=0.186  Sum_probs=60.2

Q ss_pred             HHHHHH-HHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           83 FLSLVG-SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        83 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +.+++. +.+++++..++++.|.+.+..+ ..+.|+++.+++++++||++      +..++.|+.+.+.|++++.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~------s~~~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLIIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            445555 8999999999999999999888 79999999999999999999      6669999999999998876

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.12  E-value=2.3e-06  Score=67.30  Aligned_cols=67  Identities=18%  Similarity=0.186  Sum_probs=51.0

Q ss_pred             HHHHHH-HHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934           83 FLSLVG-SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (348)
Q Consensus        83 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  155 (348)
                      +.+++. +++++++..++++.+++.+..+ .++.|+++.++++++++|++      +..+++|+++.+.|++++.
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~l------s~~~~~Gi~LIi~GV~ll~  102 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLIIN  102 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            455555 9999999999999999999888 89999999999999999999      5559999999999998886

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00