Citrus Sinensis ID: 018946
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 348 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.275 | 0.377 | 0.333 | 8e-08 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.275 | 0.377 | 0.325 | 1e-07 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF- 144
A++ +VDG L D + QAFN AF ++GLD W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ESAHLQAFNAAFAEVGLDW-YWDAPLYTRLL-KVAGGKERLMHYWR 59
Query: 145 ---------FNRKNALD-----------EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLT 184
K +D E + + PLRPG+ +D+A G+PL + T
Sbjct: 60 MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAIAT 119
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF- 144
A++ +VDG L D + QAFN AF ++GLD +W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ETAHLQAFNAAFAEVGLDW-HWDAPLYTRLL-KVAGGKERLMHYWR 59
Query: 145 ---------FNRKNALD-----------EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLT 184
K +D E + + PLRPG+ + +A G+PL + T
Sbjct: 60 MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAIAT 119
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 348 | ||||||
| 255549546 | 340 | 2-deoxyglucose-6-phosphate phosphatase, | 0.902 | 0.923 | 0.639 | 1e-114 | |
| 224134306 | 380 | predicted protein [Populus trichocarpa] | 0.933 | 0.855 | 0.605 | 1e-104 | |
| 296081418 | 367 | unnamed protein product [Vitis vinifera] | 0.882 | 0.836 | 0.562 | 1e-97 | |
| 225465107 | 376 | PREDICTED: uncharacterized protein LOC10 | 0.882 | 0.816 | 0.562 | 1e-97 | |
| 297791273 | 372 | hypothetical protein ARALYDRAFT_494462 [ | 0.890 | 0.833 | 0.529 | 1e-95 | |
| 356555851 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.735 | 0.684 | 0.623 | 8e-95 | |
| 30694711 | 372 | CbbY protein-like protein [Arabidopsis t | 0.893 | 0.836 | 0.522 | 1e-94 | |
| 356532993 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.735 | 0.690 | 0.620 | 1e-93 | |
| 449433515 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.784 | 0.729 | 0.583 | 2e-91 | |
| 414869086 | 418 | TPA: hypothetical protein ZEAMMB73_04861 | 0.732 | 0.610 | 0.607 | 2e-90 |
| >gi|255549546|ref|XP_002515825.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223545054|gb|EEF46567.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/341 (63%), Positives = 258/341 (75%), Gaps = 27/341 (7%)
Query: 6 TSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVN 65
+SCS+L SLR S ++ + + Q T RN N PSFS +FPRNY GK L N
Sbjct: 4 SSCSILYSLRLSNNF-INYNNKFCSQ-TLPRNCNSFCLGPSFSFSFPRNYKIPGKFLQPN 61
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
++F+SSS QNP +LAVLLEVDGVL+D YR GNRQAFN+AFQKLGLDCANWT PI
Sbjct: 62 GLASFTSSS--PDQNPSLELAVLLEVDGVLMDVYRLGNRQAFNIAFQKLGLDCANWTEPI 119
Query: 126 YTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDAPL 162
Y DL+RKSAGDE+RMLVLFFNR KNA+DEF+ SK APL
Sbjct: 120 YLDLVRKSAGDEERMLVLFFNRIGWPTSLPTSEKGTFVNNILQEKKNAMDEFVMSKSAPL 179
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
RPG EDF+DDA NEGIP+++LT+Y KS ++IARS+V+KLG ERI KIKIVG+ EV++SLY
Sbjct: 180 RPGAEDFIDDASNEGIPVVILTSYNKSEEKIARSIVDKLGPERILKIKIVGDAEVKQSLY 239
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG+ SG+DEQLA EARKA SA++Q+IAEEVASMLKLSV IDTSS ESL+KIVAA
Sbjct: 240 GQLVLGKGVLSGLDEQLAKEARKAASAERQKIAEEVASMLKLSVQIDTSSSESLEKIVAA 299
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
LRAGAEYA V NC LIAGSQSGV+ A++IGMPC+V+RSR
Sbjct: 300 LRAGAEYAGLRVSNCVLIAGSQSGVSAAEKIGMPCIVLRSR 340
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134306|ref|XP_002321787.1| predicted protein [Populus trichocarpa] gi|222868783|gb|EEF05914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/365 (60%), Positives = 262/365 (71%), Gaps = 40/365 (10%)
Query: 1 MKTSSTSCSLLNSLRFSTAITVSKKSYY--HYQATQLRNHNCLSPFPS------FSSTFP 52
M+ +++SCS+L+ LR S +Y+ HY T RN + S + FSSTF
Sbjct: 1 MEAAASSCSILHPLR-------SSSNYHSKHYTETPPRNSSSSSCCNNLYLGLPFSSTFL 53
Query: 53 RNYNFHGKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112
RNY F GK + N F+ F + QNP + AVLLEVDGVL+DAYR GNR+AFNVAFQ
Sbjct: 54 RNYTFPGKFVQQNLFTTFCLTPSSSKQNPSTEFAVLLEVDGVLIDAYRLGNRRAFNVAFQ 113
Query: 113 KLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----------------------KN 149
KLGLDCANWT PIY DL+RKS GDE+RMLVLFFNR KN
Sbjct: 114 KLGLDCANWTQPIYQDLVRKSDGDEERMLVLFFNRIGWPTSLPTSEKGAFIKSVLREKKN 173
Query: 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209
ALDEF+ASK + LRPGVEDF+DDA N+GIP+++LTAYGKS ++IARS+++KLG ERISK+
Sbjct: 174 ALDEFVASKSSLLRPGVEDFIDDASNKGIPVVILTAYGKSVEKIARSIIDKLGHERISKL 233
Query: 210 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 269
KIVGNEEVE+SLYGQ V KGI SG +E+LA EA KAVSAQKQ+IAEEVASMLKLSV +D
Sbjct: 234 KIVGNEEVEKSLYGQLVHHKGILSGTNEELAKEAMKAVSAQKQKIAEEVASMLKLSVSLD 293
Query: 270 TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI--TT 327
+SS ESL K VAALRAGAEYA V NC LIAGSQSGVAGA++IGMPCVV+RS T
Sbjct: 294 SSSSESLQKTVAALRAGAEYAGVSVNNCVLIAGSQSGVAGAEQIGMPCVVLRSSSTSRTQ 353
Query: 328 LPVSK 332
P +K
Sbjct: 354 FPSAK 358
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081418|emb|CBI16769.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 236/345 (68%), Gaps = 38/345 (11%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 3 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 50
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 51 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 110
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y DLLRKSAGDE+RML+LFFN+ KNALD+ L SK
Sbjct: 111 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 170
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 171 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 230
Query: 221 LYGQFVLG--KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 278
YGQ +LG KG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 231 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 290
Query: 279 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 291 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 335
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465107|ref|XP_002271573.1| PREDICTED: uncharacterized protein LOC100253116 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 236/345 (68%), Gaps = 38/345 (11%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 12 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 59
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 60 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 119
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y DLLRKSAGDE+RML+LFFN+ KNALD+ L SK
Sbjct: 120 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 179
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 180 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 239
Query: 221 LYGQFVLG--KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 278
YGQ +LG KG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 240 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 299
Query: 279 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 300 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 344
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297791273|ref|XP_002863521.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] gi|297309356|gb|EFH39780.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 237/340 (69%), Gaps = 30/340 (8%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNC-LSPFPSFSSTFPRNYNFHGKCLHVN 65
SCS+L++L+ S +K S + ++ +H+ F SFS+ FP GKCL +
Sbjct: 5 SCSILDNLQLSC----TKTSLFTQYLSEPSSHDTGRRNFLSFSN-FPGKSQILGKCLRLQ 59
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
FS+ S+ + NP +LAV+LEVDGV++D + NRQAFNVAFQKLGLDCANW P+
Sbjct: 60 RFSSICLSASREDVNPSEELAVILEVDGVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPV 118
Query: 126 YTDLLRKSAGDEDRMLVLFFN-----------------------RKNALDEFLASKDAPL 162
Y+DLLRK A DE++ML+L+FN +KNA+DEFL SK PL
Sbjct: 119 YSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLMSKSLPL 178
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
R GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G EVE+S+Y
Sbjct: 179 RSGVQEFIDNAYTERVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGENEVEQSMY 238
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV A
Sbjct: 239 GQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVA 298
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
LRA AE+ PV+NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 299 LRAAAEHIGLPVKNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555851|ref|XP_003546243.1| PREDICTED: uncharacterized protein LOC100800683 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 174/279 (62%), Positives = 217/279 (77%), Gaps = 23/279 (8%)
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
SA SSS H + + D+AVLLEVDGVL+D++R GNR AFN AF+KLGLDCANWT P+Y
Sbjct: 56 ISASSSSEYHHNSSSSPDIAVLLEVDGVLMDSHRVGNRLAFNKAFEKLGLDCANWTEPVY 115
Query: 127 TDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDAPLR 163
+DL ++SAGDE++M+ L+FNR + AL+EF+ SK PLR
Sbjct: 116 SDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSLPLR 175
Query: 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223
PG+E F+DDAYNEG+P+++LTAYGKSGD I S++EKLG +R K+ IVGN+EVE+SLYG
Sbjct: 176 PGLEQFIDDAYNEGVPVVILTAYGKSGDNITGSIMEKLGDDRSIKVIIVGNKEVEQSLYG 235
Query: 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 283
Q VLGK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDTSS ESL KIVAAL
Sbjct: 236 QLVLGKVIASGLDEELANEAKRAVSAEKQRLAKEVASMLKLSVEIDTSSSESLAKIVAAL 295
Query: 284 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
RAGAEYA PV NC L+AGSQSGVAG ++GMPCVV+RS
Sbjct: 296 RAGAEYAGIPVCNCVLVAGSQSGVAGGTQVGMPCVVLRS 334
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694711|ref|NP_199330.2| CbbY protein-like protein [Arabidopsis thaliana] gi|44917581|gb|AAS49115.1| At5g45170 [Arabidopsis thaliana] gi|62321581|dbj|BAD95125.1| putative protein [Arabidopsis thaliana] gi|332007829|gb|AED95212.1| CbbY protein-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 229/339 (67%), Gaps = 28/339 (8%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNP 66
SCS+LN+L+ S T Y +++ PF S FP GKCL +
Sbjct: 5 SCSILNNLQISCTKTSIFTQYLSERSSHDTGRRNFLPF----SNFPGKSQILGKCLRLQR 60
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
FS+ S+ + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDCANW P+Y
Sbjct: 61 FSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPVY 119
Query: 127 TDLLRKSAGDEDRMLVLFFN-----------------------RKNALDEFLASKDAPLR 163
+DLLRK A DE++ML+L+FN +KNA+DEFL SK PLR
Sbjct: 120 SDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLISKSLPLR 179
Query: 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223
GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+ EVE+S+YG
Sbjct: 180 SGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDNEVEQSMYG 239
Query: 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 283
Q VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV AL
Sbjct: 240 QLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVAL 299
Query: 284 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
RA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 300 RAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532993|ref|XP_003535053.1| PREDICTED: uncharacterized protein LOC100792632 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/282 (62%), Positives = 218/282 (77%), Gaps = 26/282 (9%)
Query: 67 FSAFSSSSGHDSQNPP---RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
SA SS++ H+ N +DLAVLLEV GVL+D++R GNR AFN AF+KLGLDCANWT
Sbjct: 50 ISASSSTAEHNHPNSSSSSQDLAVLLEVQGVLMDSHRVGNRLAFNKAFEKLGLDCANWTE 109
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y+DL ++SAGDE++M+ L+FNR + AL+EF+ SK
Sbjct: 110 PVYSDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSL 169
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPG+E F+DDAYNEGIP+++LTAY KSGD IARS++EKLG +R K+ IVGN+EVE+S
Sbjct: 170 PLRPGLEQFIDDAYNEGIPVVILTAYSKSGDNIARSIMEKLGDDRSIKVIIVGNKEVEQS 229
Query: 221 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 280
LYGQ V GK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDT S ESL KIV
Sbjct: 230 LYGQLVSGKVIASGLDEELAKEAKRAVSAEKQRLAKEVASMLKLSVEIDTGSSESLAKIV 289
Query: 281 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
AALRAGAEYA PV NC L+AGSQSGVAGA ++GMPCVV+RS
Sbjct: 290 AALRAGAEYAGIPVCNCVLVAGSQSGVAGATQVGMPCVVLRS 331
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433515|ref|XP_004134543.1| PREDICTED: uncharacterized protein LOC101206737 [Cucumis sativus] gi|449506776|ref|XP_004162845.1| PREDICTED: uncharacterized protein LOC101226823 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/298 (58%), Positives = 225/298 (75%), Gaps = 25/298 (8%)
Query: 49 STFPRNYNFH-GKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAF 107
S F R+YNF L + +AFSSSS ++ +P ++LAVLLEV+GVLVDAYR NRQAF
Sbjct: 44 SVFSRSYNFIVDSSLRIRRLTAFSSSSSSNNDSP-QELAVLLEVEGVLVDAYRSTNRQAF 102
Query: 108 NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------------------- 147
N AF+KLGLDCANWT P+Y+DL+RK+A +E+RML+++FNR
Sbjct: 103 NEAFRKLGLDCANWTEPVYSDLVRKNAANEERMLIMYFNRIGWPTSLPTNEKESFIKSVL 162
Query: 148 ---KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204
K A DE + S+ PLRPGVEDF+D+A+NEGIP+I+LTAY KSG+ IARS++ KLG E
Sbjct: 163 REKKKASDELMVSQSLPLRPGVEDFIDNAHNEGIPVIILTAYSKSGEEIARSIINKLGPE 222
Query: 205 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 264
RISK+KIVGNEE+ +SLY +FV G+ SG++E+LA EA KA SA+KQ IA++VAS LKL
Sbjct: 223 RISKVKIVGNEEMRQSLYSEFVSGQAKQSGLEEELAKEAMKAASAEKQRIAKKVASALKL 282
Query: 265 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
SV+I+T+S ESLDKI+ ALRAG+E A PV NC L+AG+QSG+ GA+RIGMP +V+RS
Sbjct: 283 SVEINTTSSESLDKIICALRAGSELAGTPVSNCILVAGTQSGIDGAERIGMPRIVIRS 340
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414869086|tpg|DAA47643.1| TPA: hypothetical protein ZEAMMB73_048619 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/280 (60%), Positives = 204/280 (72%), Gaps = 25/280 (8%)
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
P F SS + PRDL +LLEV+GVL D YRFGNRQAFNVAF+ LGLDCANWT PI
Sbjct: 107 PAPPFRCSSSSPENSAPRDLGLLLEVEGVLADVYRFGNRQAFNVAFRSLGLDCANWTEPI 166
Query: 126 YTDLLRKSAGDEDRMLVLFFNRKN-----------------------ALDEFLASKDAPL 162
Y DL+RK+ GDE+RML LFF+R AL+EF AS PL
Sbjct: 167 YADLVRKACGDEERMLALFFDRIGWPTSLPTSEKGSFIKSVLREKLKALEEFSASDSLPL 226
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
RPGVE F+DDA EG+PL +L AYG++G++I+RS+ KLG ERISKIKIVGN EVE S Y
Sbjct: 227 RPGVEKFIDDALGEGVPLAILAAYGRNGEKISRSIAMKLGPERISKIKIVGNVEVEESFY 286
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG++SG+DEQL EA+KA SA+KQ IAE+VAS+LKLSVDI S ES DK++AA
Sbjct: 287 GQLVLGKGVTSGLDEQLVREAQKAASAEKQRIAEKVASILKLSVDITAS--ESSDKVIAA 344
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
LRAG+EY V++C L+AGSQSGV A+RIGMPC+V+RS
Sbjct: 345 LRAGSEYVGCDVQSCILVAGSQSGVLAAERIGMPCIVVRS 384
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 348 | ||||||
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.505 | 0.473 | 0.636 | 8.3e-83 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.169 | 0.184 | 0.387 | 1.9e-05 |
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 588 (212.0 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 112/176 (63%), Positives = 143/176 (81%)
Query: 147 RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206
+KNA+DEFL SK PLR GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+
Sbjct: 163 KKNAMDEFLISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERL 222
Query: 207 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV 266
+K++G+ EVE+S+YGQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSV
Sbjct: 223 PNVKVIGDNEVEQSMYGQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSV 282
Query: 267 DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
DIDT+S E L+KIV ALRA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 283 DIDTTSSERLEKIVVALRAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 102 (41.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLVD + G+R +FN F++ L+ W +Y +LL K G ++RM +F
Sbjct: 78 ALLFDCDGVLVDTEKDGHRISFNDTFKERDLN-VTWDVDLYGELL-KIGGGKERMTA-YF 134
Query: 146 NR 147
N+
Sbjct: 135 NK 136
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 348 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 2e-12 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 9e-08 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 7e-06 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 0.001 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLV+ R G+R AFN AF++ GL W +Y D L G ++RM +F
Sbjct: 42 ALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELY-DELLNIGGGKERM-TWYF 99
Query: 146 N------------------RKNALD-----------EFLASKDAPLRPGVEDFVDDAYNE 176
N RK +D E + S PLRPGV +D+A
Sbjct: 100 NENGWPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAA 159
Query: 177 GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219
GI + V + + + + LG ER + + ++V +
Sbjct: 160 GIKVAVCSTSNEKAVSKIVNTL--LGPERAQGLDVFAGDDVPK 200
|
Length = 286 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 9e-08
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 21/129 (16%)
Query: 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGDE 137
++ ++DG L+D ++A ++LGLD + DLLR+ D
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 138 DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR-IARS 196
D +L E+ P V + + +G+ L++L+ +G R
Sbjct: 61 DEILEAL-------LEYNLESRLEPFPDVVELLRRLKAKGVKLVILS----NGSREAVER 109
Query: 197 VVEKLGSER 205
++EKLG
Sbjct: 110 LLEKLGLLD 118
|
Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 7e-06
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGD 136
A+L ++DG LVD+ +AFN A +LGL + + L A +
Sbjct: 6 AILFDLDGTLVDSAE-DILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADE 64
Query: 137 EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS 196
E ++ R+ L + ++ L PGV++ + + G L ++T +
Sbjct: 65 EAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERE---LDI 121
Query: 197 VVEKLG 202
+++ LG
Sbjct: 122 LLKALG 127
|
Length = 220 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-NWTAPIY-------TDLLRKSAGDE 137
AV+ ++DG LVD+ + +A+ A ++ G++ + ++ DLLRK A E
Sbjct: 4 AVIFDMDGTLVDSEPL-HARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGE 62
Query: 138 DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 197
D + R E L + PGV + ++ GIPL V ++ S R A V
Sbjct: 63 DPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERV 119
Query: 198 VEKLGSERISKIKIVGNEEVERS 220
+ +LG IV ++V R
Sbjct: 120 LARLGLLDYFD-VIVTADDVARG 141
|
Length = 221 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 348 | |||
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.95 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.94 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.94 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.94 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.94 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.93 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.93 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.93 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.93 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.92 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.92 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.92 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.92 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.92 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.92 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.92 | |
| PLN02940 | 382 | riboflavin kinase | 99.91 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.91 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.91 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.91 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.91 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.91 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.9 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.89 | |
| PLN02811 | 220 | hydrolase | 99.88 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.87 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.86 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.86 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.86 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.86 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.85 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.84 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.84 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.84 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.83 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.82 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.82 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.79 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.79 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.77 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.74 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.74 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.73 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.72 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.72 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.7 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.68 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.67 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.66 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.66 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.61 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.6 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.58 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.58 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.58 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.55 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.54 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.54 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.53 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.53 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.53 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.5 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.5 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.49 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.47 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.46 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.45 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.45 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.45 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.44 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.43 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.31 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.31 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.27 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.26 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.24 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.19 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.19 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.18 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.17 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.16 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.12 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.12 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.1 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.09 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.07 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.95 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.95 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.94 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.93 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.89 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.87 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.86 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.84 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.83 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.79 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.73 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.73 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.72 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.7 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.7 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.7 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.67 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.56 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.53 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.51 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.5 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.47 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.41 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.31 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.31 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.27 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.26 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.21 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.21 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.19 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.18 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.18 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.09 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.07 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.97 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.92 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.92 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.91 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.84 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.83 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.81 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.8 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.72 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.7 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.5 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.49 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.49 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.47 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.46 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.45 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.37 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.35 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.33 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.21 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.17 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.1 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.09 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.09 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.07 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.98 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.96 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.95 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.85 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 96.84 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.84 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.72 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.53 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.48 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.44 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.38 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.33 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.26 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.25 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.18 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.08 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.07 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.98 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 95.95 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 95.89 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.84 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.76 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.74 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.67 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.65 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.62 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.59 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.41 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.26 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.18 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.14 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.14 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.01 | |
| PLN02887 | 580 | hydrolase family protein | 94.8 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.75 | |
| PLN02887 | 580 | hydrolase family protein | 94.5 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.38 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 93.76 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 93.15 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 93.0 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 92.95 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.82 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 92.4 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 92.4 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 92.23 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 91.55 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 89.98 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 89.71 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 89.38 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 89.14 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 88.58 | |
| PLN02423 | 245 | phosphomannomutase | 88.55 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 88.1 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 87.72 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 86.04 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 85.6 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 85.41 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 85.07 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 84.88 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 84.48 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 83.7 | |
| PLN02423 | 245 | phosphomannomutase | 82.98 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 82.84 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 82.17 |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=221.03 Aligned_cols=178 Identities=24% Similarity=0.307 Sum_probs=138.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh---------HHHHHHH-
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN---------RKNALDE- 153 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~- 153 (348)
+++|||||||||+|++.. |.++|.++++++|+. .+.+.+....+............... ..+.+.+
T Consensus 2 ~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEA 77 (221)
T ss_pred CcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHH
Confidence 579999999999999998 999999999999997 55555555544332222222111110 0111111
Q ss_pred -HHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 154 -FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 154 -~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
.......++.||+.++|+.|+++|++++++|++ ....+...++.+|+.++|+.++.+. ++..
T Consensus 78 ~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s---~~~~~~~~L~~~gl~~~f~~~v~~~-dv~~------------- 140 (221)
T COG0637 78 EALELEGLKPIPGVVELLEQLKARGIPLAVASSS---PRRAAERVLARLGLLDYFDVIVTAD-DVAR------------- 140 (221)
T ss_pred HHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCC---hHHHHHHHHHHccChhhcchhccHH-HHhc-------------
Confidence 122346789999999999999999999999994 6689999999999999998764333 2222
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
+||+|++ |..++++||++|++||.|+|+++||+||++
T Consensus 141 -----------------------------~KP~Pd~--------------yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a 177 (221)
T COG0637 141 -----------------------------GKPAPDI--------------YLLAAERLGVDPEECVVVEDSPAGIQAAKA 177 (221)
T ss_pred -----------------------------CCCCCHH--------------HHHHHHHcCCChHHeEEEecchhHHHHHHH
Confidence 2999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCC
Q 018946 313 IGMPCVVMRSRCI 325 (348)
Q Consensus 313 aG~~~i~v~~~~~ 325 (348)
+||.+|++..+..
T Consensus 178 AGm~vv~v~~~~~ 190 (221)
T COG0637 178 AGMRVVGVPAGHD 190 (221)
T ss_pred CCCEEEEecCCCC
Confidence 9999999998444
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=215.23 Aligned_cols=184 Identities=21% Similarity=0.257 Sum_probs=136.1
Q ss_pred CCCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCC-CCCCHHHH-HHHHhcccCcHHHHH--------HHHh-hH
Q 018946 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIY-TDLLRKSAGDEDRML--------VLFF-NR 147 (348)
Q Consensus 79 ~~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~-~~~~~~~~-~~l~~~~~~~~~~~~--------~~~~-~~ 147 (348)
+...++++||||+||||+|+... +..+|+++++++|++. ..++.+.+ ..+.+.......... .... ..
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDK 95 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHH
Confidence 34456789999999999999987 8999999999987531 02444332 222332111100000 0000 00
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
...|.++.. ...+++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.++.+. ++..
T Consensus 96 ~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~iv~~~-~~~~-------- 162 (248)
T PLN02770 96 EALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQAVIIGS-ECEH-------- 162 (248)
T ss_pred HHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcEEEecC-cCCC--------
Confidence 223333332 34788999999999999999999999995 6789999999999999998765433 2211
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.||+|++ |..+++++|++|++|+||||+..|+
T Consensus 163 ----------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~l~vgDs~~Di 194 (248)
T PLN02770 163 ----------------------------------AKPHPDP--------------YLKALEVLKVSKDHTFVFEDSVSGI 194 (248)
T ss_pred ----------------------------------CCCChHH--------------HHHHHHHhCCChhHEEEEcCCHHHH
Confidence 2999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 018946 308 AGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~ 324 (348)
++|+++||++|++.++.
T Consensus 195 ~aA~~aGi~~i~v~~g~ 211 (248)
T PLN02770 195 KAGVAAGMPVVGLTTRN 211 (248)
T ss_pred HHHHHCCCEEEEEeCCC
Confidence 99999999999998875
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=211.30 Aligned_cols=178 Identities=20% Similarity=0.171 Sum_probs=131.2
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHH-------H---HHHHhh----H--
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-------M---LVLFFN----R-- 147 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~-------~---~~~~~~----~-- 147 (348)
+++||||+||||+|+....+..+|+++++++|++ ++.+.+...++........ . ....++ .
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEAD 78 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHH
Confidence 5799999999999986533578999999999986 4544444443322100000 0 000000 0
Q ss_pred ----HHHHH----HHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc-hheeecchhhh
Q 018946 148 ----KNALD----EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEVE 218 (348)
Q Consensus 148 ----~~~~~----~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f-~~~i~~~~e~~ 218 (348)
...+. +.+. ....++||+.++|+.|+++|++++|+||+ ....++.+++++|+..+| +.+ ++.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~i-i~~~~~~ 153 (253)
T TIGR01422 79 IEAIYEAFEPLQLAKLA-EYSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDYN-VTTDDVP 153 (253)
T ss_pred HHHHHHHHHHHHHHHHH-hcCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCceE-EccccCC
Confidence 11222 2222 34688999999999999999999999995 678899999999999886 544 4444332
Q ss_pred hhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcE
Q 018946 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 297 (348)
Q Consensus 219 ~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~ 297 (348)
. .||+|++ |..+++++|+. |++|
T Consensus 154 ~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 154 A------------------------------------------GRPAPWM--------------ALKNAIELGVYDVAAC 177 (253)
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCCCchhe
Confidence 2 2999999 99999999995 9999
Q ss_pred EEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 298 FLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 298 i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
+||||+.+|+.+|+++||.+|+|.++..
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999999999999999998875
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=210.65 Aligned_cols=178 Identities=20% Similarity=0.219 Sum_probs=134.8
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHH---------HHhh-HHHHHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV---------LFFN-RKNALDE 153 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~-~~~~~~~ 153 (348)
+++||||+||||+|+... +..+|+.+++++|.+ .++.+.+....+........... .... ....|.+
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRA--PITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEA 88 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 479999999999999987 899999999999987 36666655554432111000000 0000 0122222
Q ss_pred HHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 154 ~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.+. ...+++||+.++|+.|+++|++++|+||+ ....+..+++++|+..+|+.++ +++++.
T Consensus 89 ~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~---~~~~~~~~l~~~~l~~~f~~i~-~~~~~~--------------- 148 (229)
T PRK13226 89 LIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNK---PEYLARLILPQLGWEQRCAVLI-GGDTLA--------------- 148 (229)
T ss_pred hhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCC---CHHHHHHHHHHcCchhcccEEE-ecCcCC---------------
Confidence 222 23678999999999999999999999995 5677888999999999887543 332221
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
..||+|++ |..+++++|++|++|+||||+.+|+.+|+++
T Consensus 149 ---------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~a 187 (229)
T PRK13226 149 ---------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYVGDDERDILAARAA 187 (229)
T ss_pred ---------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEeCCCHHHHHHHHHC
Confidence 12999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCCC
Q 018946 314 GMPCVVMRSRCI 325 (348)
Q Consensus 314 G~~~i~v~~~~~ 325 (348)
|+.+|++.++..
T Consensus 188 G~~~i~v~~g~~ 199 (229)
T PRK13226 188 GMPSVAALWGYR 199 (229)
T ss_pred CCcEEEEeecCC
Confidence 999999988775
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=214.67 Aligned_cols=180 Identities=22% Similarity=0.255 Sum_probs=134.2
Q ss_pred CCCCceEEEEecCCcccccc-ccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHH----------HHhhHH
Q 018946 80 NPPRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV----------LFFNRK 148 (348)
Q Consensus 80 ~~~~~kaviFDvDGTL~d~~-~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~~~~~ 148 (348)
.....++|||||||||+|+. .+ +..+|+++++++|++. ...+.+..+.+.+......... ......
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~~~~-~~~a~~~~~~~~G~~~--~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~ 96 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDDSEL-ERKAWRALAEEEGKRP--PPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRK 96 (260)
T ss_pred hcCCceEEEEeCCCceeCCchHH-HHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 34668899999999999996 44 7789999999999972 2233334444433221111110 000001
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
..+..........++||+.++|+.|+++|++++|+||+ ....++.+++++|+..+|+.++.+. ++.
T Consensus 97 ~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~ii~~~-d~~---------- 162 (260)
T PLN03243 97 EDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTR---PRRYLERAIEAVGMEGFFSVVLAAE-DVY---------- 162 (260)
T ss_pred HHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCc---CHHHHHHHHHHcCCHhhCcEEEecc-cCC----------
Confidence 11112222335678999999999999999999999995 5688999999999999998765433 221
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
..||+|++ |..+++++|++|++|+||||+..|+.
T Consensus 163 --------------------------------~~KP~Pe~--------------~~~a~~~l~~~p~~~l~IgDs~~Di~ 196 (260)
T PLN03243 163 --------------------------------RGKPDPEM--------------FMYAAERLGFIPERCIVFGNSNSSVE 196 (260)
T ss_pred --------------------------------CCCCCHHH--------------HHHHHHHhCCChHHeEEEcCCHHHHH
Confidence 12999999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECC
Q 018946 309 GAQRIGMPCVVMRS 322 (348)
Q Consensus 309 aA~~aG~~~i~v~~ 322 (348)
+|+++||.+|++.+
T Consensus 197 aA~~aG~~~i~v~g 210 (260)
T PLN03243 197 AAHDGCMKCVAVAG 210 (260)
T ss_pred HHHHcCCEEEEEec
Confidence 99999999999973
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=209.51 Aligned_cols=184 Identities=18% Similarity=0.193 Sum_probs=135.6
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHH-HHhcccCcHHHHHHH-----------Hhh-HHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRMLVL-----------FFN-RKNA 150 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~-l~~~~~~~~~~~~~~-----------~~~-~~~~ 150 (348)
+++||||+||||+|+... +..+|+++++++|++ .+...+.. ..+.......+.... ... ....
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEER 76 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 468999999999999987 899999999999987 33332222 333221111110000 000 0112
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--ccchheeecchhhhhhhccccccc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
+.+.+.....+++||+.++|+.|+++|++++|+||+ ....++.+++++|+. .+|+.++.+.+ ..
T Consensus 77 ~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~i~~~~~-~~---------- 142 (220)
T TIGR03351 77 LAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDAVVCPSD-VA---------- 142 (220)
T ss_pred HHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCEEEcCCc-CC----------
Confidence 222222334679999999999999999999999995 678899999999998 89987644332 11
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcEEEEecCHhhH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGV 307 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~i~VGDs~~Di 307 (348)
..||+|++ |+.+++++|+. |++|+||||+..|+
T Consensus 143 --------------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~igD~~~Di 176 (220)
T TIGR03351 143 --------------------------------AGRPAPDL--------------ILRAMELTGVQDVQSVAVAGDTPNDL 176 (220)
T ss_pred --------------------------------CCCCCHHH--------------HHHHHHHcCCCChhHeEEeCCCHHHH
Confidence 12999999 99999999997 79999999999999
Q ss_pred HHHHHcCCcE-EEECCCCCCccccc
Q 018946 308 AGAQRIGMPC-VVMRSRCITTLPVS 331 (348)
Q Consensus 308 ~aA~~aG~~~-i~v~~~~~~~~~l~ 331 (348)
.+|+++||.+ |++.++......+.
T Consensus 177 ~aa~~aG~~~~i~~~~g~~~~~~~~ 201 (220)
T TIGR03351 177 EAGINAGAGAVVGVLTGAHDAEELS 201 (220)
T ss_pred HHHHHCCCCeEEEEecCCCcHHHHh
Confidence 9999999999 89988776655443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=206.61 Aligned_cols=186 Identities=11% Similarity=0.081 Sum_probs=138.5
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHH-HHh-hHHHHHHHHHh---
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFF-NRKNALDEFLA--- 156 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~~~~--- 156 (348)
|.+++||||+||||+|+... +..+|++++++++.. ..+.+.+....+.+......... ... .....+.++..
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPN--QYKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHH 77 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCC--CCCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999987 889999999998865 24555555555543111110000 000 00112222221
Q ss_pred cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCch
Q 018946 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 157 ~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
.....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+.++|+.++. .+++.
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~i~~-~~~~~------------------ 135 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDVVIT-LDDVE------------------ 135 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeEEEe-cCcCC------------------
Confidence 234678999999999999999999999995 57889999999999999987643 22221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
..||+|++ |+.++++++++|++|++|||+.+|+.+|+++|++
T Consensus 136 ------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 136 ------------------------HAKPDPEP--------------VLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred ------------------------CCCCCcHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 12999999 9999999999999999999999999999999999
Q ss_pred EEEECCCCCCcccc
Q 018946 317 CVVMRSRCITTLPV 330 (348)
Q Consensus 317 ~i~v~~~~~~~~~l 330 (348)
+|++.++.....++
T Consensus 178 ~i~v~~g~~~~~~l 191 (214)
T PRK13288 178 TAGVAWTIKGREYL 191 (214)
T ss_pred EEEEcCCCCCHHHH
Confidence 99999876544433
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=206.27 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=125.8
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHH---------HHHhhHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML---------VLFFNRKNALD 152 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~ 152 (348)
|.+++||||+||||+|+... +..+|+++++++|++. .+....+.+.......+.. ...+.....+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLEQIE 75 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence 46789999999999999887 8999999999999862 2222222222111000000 00000000111
Q ss_pred HHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 153 ~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
... .....++||+.++|+.|+++|++++|+||+ ........++.+|+. +|+.+ ++.+++.
T Consensus 76 ~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~---~~~~~~~~l~~~~l~-~~~~i-~~~~~~~-------------- 135 (218)
T PRK11587 76 ATD-TEGITALPGAIALLNHLNKLGIPWAIVTSG---SVPVASARHKAAGLP-APEVF-VTAERVK-------------- 135 (218)
T ss_pred Hhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCC---CchHHHHHHHhcCCC-CccEE-EEHHHhc--------------
Confidence 111 235678999999999999999999999996 345667778888884 45433 3333321
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |..+++++|+.|++|+||||+..|+++|++
T Consensus 136 ----------------------------~~KP~p~~--------------~~~~~~~~g~~p~~~l~igDs~~di~aA~~ 173 (218)
T PRK11587 136 ----------------------------RGKPEPDA--------------YLLGAQLLGLAPQECVVVEDAPAGVLSGLA 173 (218)
T ss_pred ----------------------------CCCCCcHH--------------HHHHHHHcCCCcccEEEEecchhhhHHHHH
Confidence 13999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCC
Q 018946 313 IGMPCVVMRSRC 324 (348)
Q Consensus 313 aG~~~i~v~~~~ 324 (348)
+||++|++.++.
T Consensus 174 aG~~~i~v~~~~ 185 (218)
T PRK11587 174 AGCHVIAVNAPA 185 (218)
T ss_pred CCCEEEEECCCC
Confidence 999999998764
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=204.98 Aligned_cols=199 Identities=20% Similarity=0.206 Sum_probs=145.3
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHH----------HHHhhHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML----------VLFFNRKNAL 151 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~ 151 (348)
+.+++|+||+||||+|+... +..+++.+++++|++. .+.......++.......... ...-.....+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEF 78 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 46789999999999999987 8899999999999983 455555554443211111000 0000001223
Q ss_pred HHHHhcC-CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 152 DEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 152 ~~~~~~~-~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
.+..... ...++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+.++. .+...
T Consensus 79 ~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k---~~~~~~~~l~~~gl~~~F~~i~g-~~~~~------------ 142 (220)
T COG0546 79 LTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNK---PERELDILLKALGLADYFDVIVG-GDDVP------------ 142 (220)
T ss_pred HHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHhCCccccceEEc-CCCCC------------
Confidence 3332222 2478999999999999999999999994 68999999999999999998753 22111
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|.. +..+++.+|++|++++||||+..||.+|
T Consensus 143 ------------------------------~~KP~P~~--------------l~~~~~~~~~~~~~~l~VGDs~~Di~aA 178 (220)
T COG0546 143 ------------------------------PPKPDPEP--------------LLLLLEKLGLDPEEALMVGDSLNDILAA 178 (220)
T ss_pred ------------------------------CCCcCHHH--------------HHHHHHHhCCChhheEEECCCHHHHHHH
Confidence 12999999 9999999999989999999999999999
Q ss_pred HHcCCcEEEECCCCCCccccc--ccccchhHHHHh
Q 018946 311 QRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRI 343 (348)
Q Consensus 311 ~~aG~~~i~v~~~~~~~~~l~--~~~~~~d~l~~~ 343 (348)
++||+++|+|.+++...+.+. .++.+++++-+.
T Consensus 179 ~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 179 KAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred HHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 999999999999986433333 333344444443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=207.96 Aligned_cols=181 Identities=20% Similarity=0.149 Sum_probs=129.7
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH------------------------
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE------------------------ 137 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~------------------------ 137 (348)
+++++||||+||||+|+....+..+|+++++++|++ ++.+.+...++......
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 78 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTE 78 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCH
Confidence 357899999999999986432468999999999986 44443333333211000
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhh
Q 018946 138 DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (348)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~ 217 (348)
.......-.....+.+.+. ....++||+.++|+.|+++|++++|+||+ ....+..+++.+++..+|...+++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~elL~~L~~~g~~l~I~T~~---~~~~~~~~l~~~~l~~~~~d~i~~~~~~ 154 (267)
T PRK13478 79 ADVDALYAAFEPLQIAKLA-DYATPIPGVLEVIAALRARGIKIGSTTGY---TREMMDVVVPLAAAQGYRPDHVVTTDDV 154 (267)
T ss_pred HHHHHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHHhhcCCCceEEEcCCcC
Confidence 0000000000111222222 24678999999999999999999999995 5678889999999887752233444333
Q ss_pred hhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCc
Q 018946 218 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRN 296 (348)
Q Consensus 218 ~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~ 296 (348)
.. .||+|++ |..+++++|+. |++
T Consensus 155 ~~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~e 178 (267)
T PRK13478 155 PA------------------------------------------GRPYPWM--------------ALKNAIELGVYDVAA 178 (267)
T ss_pred CC------------------------------------------CCCChHH--------------HHHHHHHcCCCCCcc
Confidence 21 2999999 99999999996 699
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 297 CFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 297 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
|+||||+.+|+.+|+++||.+|+|.+++.
T Consensus 179 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 179 CVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred eEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 99999999999999999999999998875
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=201.50 Aligned_cols=181 Identities=22% Similarity=0.264 Sum_probs=134.2
Q ss_pred EEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH---------h-hHHHHHHHHHh
Q 018946 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---------F-NRKNALDEFLA 156 (348)
Q Consensus 87 viFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~ 156 (348)
||||+||||+|+... +..+|+++++++|++ .++.+.+...++............. . ...+.+.+++.
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLP--PATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYE 77 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHH
Confidence 699999999999886 789999999999986 3565555544443211000000000 0 00112222222
Q ss_pred ---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 157 ---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 157 ---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.....++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|+.++ +.+++.
T Consensus 78 ~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~-~~~~~~--------------- 138 (213)
T TIGR01449 78 EVAGELTSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSVLI-GGDSLA--------------- 138 (213)
T ss_pred HhccccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcEEE-ecCCCC---------------
Confidence 124678999999999999999999999995 5688999999999999998653 333221
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++
T Consensus 139 ---------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs~~d~~aa~~a 177 (213)
T TIGR01449 139 ---------------------------QRKPHPDP--------------LLLAAERLGVAPQQMVYVGDSRVDIQAARAA 177 (213)
T ss_pred ---------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHC
Confidence 12999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCCCCcccc
Q 018946 314 GMPCVVMRSRCITTLPV 330 (348)
Q Consensus 314 G~~~i~v~~~~~~~~~l 330 (348)
||++|++.++......+
T Consensus 178 G~~~i~v~~g~~~~~~l 194 (213)
T TIGR01449 178 GCPSVLLTYGYRYGEAI 194 (213)
T ss_pred CCeEEEEccCCCCCcch
Confidence 99999998877654443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=204.08 Aligned_cols=182 Identities=16% Similarity=0.181 Sum_probs=134.4
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHH-----------HhhH-HH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL-----------FFNR-KN 149 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------~~~~-~~ 149 (348)
..+++|+||+||||+|+... +..+|+++++++|++. .........++............ .... .+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIA 81 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCC--CHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 35789999999999999887 8899999999999862 22233333332211000000000 0000 11
Q ss_pred HHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccc
Q 018946 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 150 ~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
.+.+.+. ....++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|+.++.+ +++.
T Consensus 82 ~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~-~~~~----------- 145 (222)
T PRK10826 82 RVISLIE-ETRPLLPGVREALALCKAQGLKIGLASAS---PLHMLEAVLTMFDLRDYFDALASA-EKLP----------- 145 (222)
T ss_pred HHHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHhCcchhcccEEEEc-ccCC-----------
Confidence 2222222 24679999999999999999999999995 568889999999999999876533 2221
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~a 309 (348)
.+||+|++ |+.+++++|++|++|++|||+.+|+.+
T Consensus 146 -------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~igDs~~Di~a 180 (222)
T PRK10826 146 -------------------------------YSKPHPEV--------------YLNCAAKLGVDPLTCVALEDSFNGMIA 180 (222)
T ss_pred -------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCChhhHHH
Confidence 13999999 999999999999999999999999999
Q ss_pred HHHcCCcEEEECCCCCCc
Q 018946 310 AQRIGMPCVVMRSRCITT 327 (348)
Q Consensus 310 A~~aG~~~i~v~~~~~~~ 327 (348)
|+++||++|++.++....
T Consensus 181 A~~aG~~~i~v~~~~~~~ 198 (222)
T PRK10826 181 AKAARMRSIVVPAPEQQN 198 (222)
T ss_pred HHHcCCEEEEecCCccCc
Confidence 999999999999876543
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-25 Score=210.04 Aligned_cols=191 Identities=27% Similarity=0.448 Sum_probs=135.8
Q ss_pred CCceEEEEecCCcccccc-ccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc-----------------------H
Q 018946 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-----------------------E 137 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~-~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~-----------------------~ 137 (348)
..+++|||||||||+|+. .. +..+|+++++++|++...|+.+.+..+.....+. .
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccc
Confidence 446899999999999999 87 8899999999999842235555443322110000 0
Q ss_pred ---HHHHHHHh-hHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe-ee
Q 018946 138 ---DRMLVLFF-NRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IV 212 (348)
Q Consensus 138 ---~~~~~~~~-~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~-i~ 212 (348)
+.....+. .....|.+.+....++++||+.++|+.|+++|++++|+||+ ....+..+++.++...+|+.. ++
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~---~~~~~~~~l~~~~~~~~~~~~~~v 193 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTS---NEKAVSKIVNTLLGPERAQGLDVF 193 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhccccccCceEEE
Confidence 00111111 11234444443334689999999999999999999999996 567778888877544444421 12
Q ss_pred cchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC
Q 018946 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (348)
Q Consensus 213 ~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv 292 (348)
+++++. ..||+|++ |..+++++|+
T Consensus 194 ~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~~~~ 217 (286)
T PLN02779 194 AGDDVP------------------------------------------KKKPDPDI--------------YNLAAETLGV 217 (286)
T ss_pred eccccC------------------------------------------CCCCCHHH--------------HHHHHHHhCc
Confidence 222211 13999999 9999999999
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEEECCCCCCcccccc
Q 018946 293 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSK 332 (348)
Q Consensus 293 ~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ 332 (348)
+|++|+||||+.+|+++|+++||.+|+|.++......+..
T Consensus 218 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ 257 (286)
T PLN02779 218 DPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSG 257 (286)
T ss_pred ChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCC
Confidence 9999999999999999999999999999988766655544
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-25 Score=200.22 Aligned_cols=182 Identities=23% Similarity=0.299 Sum_probs=134.9
Q ss_pred EEEecCCccccccccChHHHHHHHHHH-cCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-HHHHHHHH-hcCCCCCC
Q 018946 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-KNALDEFL-ASKDAPLR 163 (348)
Q Consensus 87 viFDvDGTL~d~~~~~~~~a~~~~~~~-~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~ 163 (348)
||||+||||+|+... +..+|++++++ +|.+ .++.+.+....+.......+........ ...+.+.. .....+++
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDG--PAPFEEYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLAGEVEVF 77 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCC--CCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHhhcccccC
Confidence 699999999999987 89999999988 4775 2555555555543321111110000000 11111111 12357889
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHH
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~ 243 (348)
||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.++. .++..
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~i~~-~~~~~------------------------- 128 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDHVIG-SDEVP------------------------- 128 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheeeEEe-cCcCC-------------------------
Confidence 99999999999999999999995 56888999999999999986543 22221
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 244 ~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||++|++.++
T Consensus 129 -----------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 129 -----------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred -----------------CCCCChHH--------------HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 12999999 99999999999999999999999999999999999999988
Q ss_pred CCCccccc
Q 018946 324 CITTLPVS 331 (348)
Q Consensus 324 ~~~~~~l~ 331 (348)
.....++.
T Consensus 178 ~~~~~~l~ 185 (205)
T TIGR01454 178 EGDAGELL 185 (205)
T ss_pred CCChhhhh
Confidence 76665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-25 Score=193.23 Aligned_cols=170 Identities=24% Similarity=0.331 Sum_probs=125.2
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH-------------h-hHHHHH
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-------------F-NRKNAL 151 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------~-~~~~~~ 151 (348)
+||||+||||+|+... +..+|+++++++|++ ++........+.......+..... . .....+
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYY 76 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5899999999999987 889999999999987 454444333332211111100000 0 001223
Q ss_pred HHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 152 DEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 152 ~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
.+.+.. ....++||+.++|+.|+++|++++|+||+ ......++++|+..+|+.++.+. ++.
T Consensus 77 ~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~-----~~~~~~l~~~~l~~~f~~~~~~~-~~~------------ 138 (185)
T TIGR01990 77 VELLKELTPADVLPGIKNLLDDLKKNNIKIALASAS-----KNAPTVLEKLGLIDYFDAIVDPA-EIK------------ 138 (185)
T ss_pred HHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCC-----ccHHHHHHhcCcHhhCcEEEehh-hcC------------
Confidence 333321 23468999999999999999999999995 23467899999999998764332 221
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|++ |+.++++++++|++|+||||+.+|+.+|
T Consensus 139 ------------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~v~vgD~~~di~aA 174 (185)
T TIGR01990 139 ------------------------------KGKPDPEI--------------FLAAAEGLGVSPSECIGIEDAQAGIEAI 174 (185)
T ss_pred ------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence 12999999 9999999999999999999999999999
Q ss_pred HHcCCcEEEEC
Q 018946 311 QRIGMPCVVMR 321 (348)
Q Consensus 311 ~~aG~~~i~v~ 321 (348)
+++||++|+|.
T Consensus 175 ~~aG~~~i~v~ 185 (185)
T TIGR01990 175 KAAGMFAVGVG 185 (185)
T ss_pred HHcCCEEEecC
Confidence 99999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=213.03 Aligned_cols=181 Identities=18% Similarity=0.200 Sum_probs=135.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHH-HhhH------HHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL-FFNR------KNALDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~------~~~~~~~ 154 (348)
...++|||||||||+|+....+..+|+++++++|++. ...+.+....+............ .... .+.+.++
T Consensus 129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~ 206 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEI 206 (381)
T ss_pred CCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 4678999999999999876326789999999999873 33434445544332211111100 0000 1122222
Q ss_pred Hh---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccc
Q 018946 155 LA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 155 ~~---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
+. .....++||+.++|+.|+++|++++|+||+ ....++.+++++|+..||+.++.+. ++..
T Consensus 207 y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~---~~~~~~~~L~~lgL~~yFd~Iv~sd-dv~~------------ 270 (381)
T PLN02575 207 YQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTR---PRKTLENAIGSIGIRGFFSVIVAAE-DVYR------------ 270 (381)
T ss_pred HHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCHHHceEEEecC-cCCC------------
Confidence 21 234678999999999999999999999995 5789999999999999999764333 2211
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
.||+|++ |..+++++|+.|++|+||||+..||++|+
T Consensus 271 ------------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~IGDS~~DIeAAk 306 (381)
T PLN02575 271 ------------------------------GKPDPEM--------------FIYAAQLLNFIPERCIVFGNSNQTVEAAH 306 (381)
T ss_pred ------------------------------CCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHH
Confidence 2999999 99999999999999999999999999999
Q ss_pred HcCCcEEEECCCC
Q 018946 312 RIGMPCVVMRSRC 324 (348)
Q Consensus 312 ~aG~~~i~v~~~~ 324 (348)
++||.+|+|.++.
T Consensus 307 ~AGm~~IgV~~~~ 319 (381)
T PLN02575 307 DARMKCVAVASKH 319 (381)
T ss_pred HcCCEEEEECCCC
Confidence 9999999998654
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=191.92 Aligned_cols=171 Identities=24% Similarity=0.329 Sum_probs=126.9
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH--------------hhHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF--------------FNRKN 149 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~~~~ 149 (348)
+++|+||+||||+|+... +..+|+++++++|++ ++........+............. .....
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNE 76 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 368999999999999987 889999999999986 443333222222111110000000 00012
Q ss_pred HHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccc
Q 018946 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 150 ~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
.+.+.+......++||+.++|+.|+++|++++++||+ ..++.+++.+|+.++|+.++. .+++.
T Consensus 77 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~-~~~~~----------- 139 (185)
T TIGR02009 77 LYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVD-ADEVK----------- 139 (185)
T ss_pred HHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeee-hhhCC-----------
Confidence 3333333344789999999999999999999999993 567889999999999986643 22221
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~a 309 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+++
T Consensus 140 -------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 140 -------------------------------EGKPHPET--------------FLLAAELLGVSPNECVVFEDALAGVQA 174 (185)
T ss_pred -------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence 13999999 999999999999999999999999999
Q ss_pred HHHcCCcEEEE
Q 018946 310 AQRIGMPCVVM 320 (348)
Q Consensus 310 A~~aG~~~i~v 320 (348)
|+++|+++|+|
T Consensus 175 A~~~G~~~i~v 185 (185)
T TIGR02009 175 ARAAGMFAVAV 185 (185)
T ss_pred HHHCCCeEeeC
Confidence 99999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=196.94 Aligned_cols=176 Identities=16% Similarity=0.230 Sum_probs=129.2
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh----H---HHHHHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R---KNALDEFL 155 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~---~~~~~~~~ 155 (348)
++++|+||+||||+|+... +..+|+++++++|++. ..++.+....+.............++ . ...+.+.+
T Consensus 3 ~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGITL--SLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEV 79 (221)
T ss_pred CCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 5789999999999999886 7899999999999862 22333443333221111111111111 0 11222211
Q ss_pred h---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 156 A---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 156 ~---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
. .....++||+.++|+.| +++++|+||+ ....+...++++|+..+|+..+++++++..
T Consensus 80 ~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------- 140 (221)
T PRK10563 80 ARLFDSELEPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------- 140 (221)
T ss_pred HHHHHccCCcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhcCC-------------
Confidence 1 23467899999999999 4999999996 457889999999999999755555543322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
.||+|++ |+.+++++|++|++|+||||+..||.+|++
T Consensus 141 -----------------------------~KP~p~~--------------~~~a~~~~~~~p~~~l~igDs~~di~aA~~ 177 (221)
T PRK10563 141 -----------------------------WKPDPAL--------------MFHAAEAMNVNVENCILVDDSSAGAQSGIA 177 (221)
T ss_pred -----------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHHHHH
Confidence 3999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCC
Q 018946 313 IGMPCVVMRSR 323 (348)
Q Consensus 313 aG~~~i~v~~~ 323 (348)
+||++|++.++
T Consensus 178 aG~~~i~~~~~ 188 (221)
T PRK10563 178 AGMEVFYFCAD 188 (221)
T ss_pred CCCEEEEECCC
Confidence 99999998754
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-24 Score=193.16 Aligned_cols=178 Identities=18% Similarity=0.193 Sum_probs=126.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHH---HHHcCCCCCCCCHHHHHH-HHh------cccCc-HHHHHHHHhh---H--
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTD-LLR------KSAGD-EDRMLVLFFN---R-- 147 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~---~~~~gl~~~~~~~~~~~~-l~~------~~~~~-~~~~~~~~~~---~-- 147 (348)
+++|+||+||||+|+... +..+|+.+ +.++|++ ++.+.+.. ... ..... .......... .
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKL 77 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHH
Confidence 679999999999999876 66776654 4566776 33322221 111 11011 1111110000 0
Q ss_pred ----HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcc
Q 018946 148 ----KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (348)
Q Consensus 148 ----~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~ 223 (348)
...+.+.. ...+.++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|+.++.+.+ +.
T Consensus 78 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~f~~i~~~~~-~~----- 147 (221)
T TIGR02253 78 VAAFVYAYHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITDG---LPVKQWEKLERLGVRDFFDAVITSEE-EG----- 147 (221)
T ss_pred HHHHHHHHHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHhCChHHhccEEEEecc-CC-----
Confidence 11111111 123678999999999999999999999995 45778889999999999987654432 21
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC
Q 018946 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (348)
Q Consensus 224 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs 303 (348)
..||+|++ |+.+++++|++|++|+||||+
T Consensus 148 -------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~igDs 176 (221)
T TIGR02253 148 -------------------------------------VEKPHPKI--------------FYAALKRLGVKPEEAVMVGDR 176 (221)
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEECCC
Confidence 12999999 999999999999999999999
Q ss_pred H-hhHHHHHHcCCcEEEECCCCCC
Q 018946 304 Q-SGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 304 ~-~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
. +|+.+|+++||.+|++.++...
T Consensus 177 ~~~di~~A~~aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 177 LDKDIKGAKNLGMKTVWINQGKSS 200 (221)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCc
Confidence 8 8999999999999999987653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=202.68 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=136.6
Q ss_pred CCCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHH---HHhhH-HHHHHHH
Q 018946 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV---LFFNR-KNALDEF 154 (348)
Q Consensus 79 ~~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~-~~~~~~~ 154 (348)
..+..+++||||+||||+|+... +..+|+++++++|++ .++.+.+..+.+.......+... ..... ...+.+.
T Consensus 57 ~~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~--~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (273)
T PRK13225 57 SYPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYD--PIDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQ 133 (273)
T ss_pred hhhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 44556899999999999999887 889999999999987 36666565555432111111000 00000 1112222
Q ss_pred Hh--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 155 LA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 155 ~~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
+. ....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+.++ +.+++
T Consensus 134 ~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~vi-~~~~~--------------- 194 (273)
T PRK13225 134 LGDCLPALQLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSVVQ-AGTPI--------------- 194 (273)
T ss_pred HHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEEEE-ecCCC---------------
Confidence 11 134678999999999999999999999996 6799999999999999998653 22211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
+|.+++ |+.++++++++|++|+||||+.+|+.+|++
T Consensus 195 ------------------------------~~k~~~--------------~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~ 230 (273)
T PRK13225 195 ------------------------------LSKRRA--------------LSQLVAREGWQPAAVMYVGDETRDVEAARQ 230 (273)
T ss_pred ------------------------------CCCHHH--------------HHHHHHHhCcChhHEEEECCCHHHHHHHHH
Confidence 122334 899999999999999999999999999999
Q ss_pred cCCcEEEECCCCCCcccc
Q 018946 313 IGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 313 aG~~~i~v~~~~~~~~~l 330 (348)
+||.+|+|.++.....++
T Consensus 231 AG~~~I~v~~g~~~~~~l 248 (273)
T PRK13225 231 VGLIAVAVTWGFNDRQSL 248 (273)
T ss_pred CCCeEEEEecCCCCHHHH
Confidence 999999999887765444
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=212.79 Aligned_cols=180 Identities=18% Similarity=0.273 Sum_probs=135.3
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh----H---HHHHHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R---KNALDEFL 155 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~---~~~~~~~~ 155 (348)
.+++||||+||||+|+... +..+|+++++++|+. |+.+....+++..............+ . ...+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLL 85 (382)
T ss_pred cCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 4789999999999999987 899999999999986 66665555555432111111101000 0 01111111
Q ss_pred h--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHH-HcCCcccchheeecchhhhhhhccccccccccc
Q 018946 156 A--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 156 ~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~-~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
. .....++||+.++|+.|+++|++++|+||+ ....+...++ .+|+.++|+.++. .+++.
T Consensus 86 ~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~---~~~~~~~~l~~~~gl~~~Fd~ii~-~d~v~-------------- 147 (382)
T PLN02940 86 SEQWCNIKALPGANRLIKHLKSHGVPMALASNS---PRANIEAKISCHQGWKESFSVIVG-GDEVE-------------- 147 (382)
T ss_pred HHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhccChHhhCCEEEe-hhhcC--------------
Confidence 1 124678999999999999999999999996 4577777776 7899999987643 33221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |+.+++++|++|++|++|||+..|+++|++
T Consensus 148 ----------------------------~~KP~p~~--------------~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~ 185 (382)
T PLN02940 148 ----------------------------KGKPSPDI--------------FLEAAKRLNVEPSNCLVIEDSLPGVMAGKA 185 (382)
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHcCCChhHEEEEeCCHHHHHHHHH
Confidence 23999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCCC
Q 018946 313 IGMPCVVMRSRCIT 326 (348)
Q Consensus 313 aG~~~i~v~~~~~~ 326 (348)
+||.+|++.++...
T Consensus 186 aGi~~I~v~~g~~~ 199 (382)
T PLN02940 186 AGMEVIAVPSIPKQ 199 (382)
T ss_pred cCCEEEEECCCCcc
Confidence 99999999986543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=191.56 Aligned_cols=182 Identities=22% Similarity=0.247 Sum_probs=136.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh-------hH------H
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-------NR------K 148 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~------~ 148 (348)
+.+++|+||+||||+|+... +..+|+++++++|.+. ++...+....+... ..+....+ .. .
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 77 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPP--AGEERVRTWVGNGA---DVLVERALTWAGREPDEELLEKLR 77 (226)
T ss_pred CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCccH---HHHHHHHHhhccCCccHHHHHHHH
Confidence 56789999999999999876 7889999999999873 55544444443321 11111110 00 1
Q ss_pred HHHHHHHhc---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccc
Q 018946 149 NALDEFLAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 149 ~~~~~~~~~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
..+.+++.. ....++||+.++|+.|+++|++++|+||+ ....++.+++++|+..+|+.++ +.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~-~~~~~~------- 146 (226)
T PRK13222 78 ELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSVVI-GGDSLP------- 146 (226)
T ss_pred HHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccEEE-cCCCCC-------
Confidence 122222221 23678999999999999999999999995 5688889999999998887643 222211
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
..||+|++ |+.++++++++|++|++|||+.+
T Consensus 147 -----------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~i~igD~~~ 177 (226)
T PRK13222 147 -----------------------------------NKKPDPAP--------------LLLACEKLGLDPEEMLFVGDSRN 177 (226)
T ss_pred -----------------------------------CCCcChHH--------------HHHHHHHcCCChhheEEECCCHH
Confidence 12999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCccc
Q 018946 306 GVAGAQRIGMPCVVMRSRCITTLP 329 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~~~ 329 (348)
|+.+|+++|+++|+|.++......
T Consensus 178 Di~~a~~~g~~~i~v~~g~~~~~~ 201 (226)
T PRK13222 178 DIQAARAAGCPSVGVTYGYNYGEP 201 (226)
T ss_pred HHHHHHHCCCcEEEECcCCCCccc
Confidence 999999999999999987664433
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=188.62 Aligned_cols=172 Identities=19% Similarity=0.285 Sum_probs=127.0
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh----------h-HHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF----------N-RKNAL 151 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~-~~~~~ 151 (348)
.+++||||+||||+|+... +..+|+++++++|++ ++........+.............. . ....+
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAV 79 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 4689999999999999987 899999999999986 4444333333322111000000000 0 01122
Q ss_pred HHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccc
Q 018946 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 152 ~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
.+.+. ...++.|| .++|+.|++. ++++|+||+ ....++..++.+|+..+|+.++ +.+++.
T Consensus 80 ~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~---~~~~~~~~l~~~~l~~~fd~i~-~~~~~~------------- 139 (188)
T PRK10725 80 KSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGS---ESAIAEALLAHLGLRRYFDAVV-AADDVQ------------- 139 (188)
T ss_pred HHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCC---chHHHHHHHHhCCcHhHceEEE-ehhhcc-------------
Confidence 23322 34567886 5899999875 899999995 6789999999999999998754 333332
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
..||+|++ |+.+++++|++|++||+|||+.+|+++|+
T Consensus 140 -----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~igDs~~di~aA~ 176 (188)
T PRK10725 140 -----------------------------HHKPAPDT--------------FLRCAQLMGVQPTQCVVFEDADFGIQAAR 176 (188)
T ss_pred -----------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeccHhhHHHHH
Confidence 23999999 99999999999999999999999999999
Q ss_pred HcCCcEEEEC
Q 018946 312 RIGMPCVVMR 321 (348)
Q Consensus 312 ~aG~~~i~v~ 321 (348)
++|+++|+|.
T Consensus 177 ~aG~~~i~~~ 186 (188)
T PRK10725 177 AAGMDAVDVR 186 (188)
T ss_pred HCCCEEEeec
Confidence 9999999986
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=197.33 Aligned_cols=186 Identities=19% Similarity=0.217 Sum_probs=136.2
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHH-HHH----------HHh-hHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLV----------LFF-NRKNA 150 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~-~~~----------~~~-~~~~~ 150 (348)
.+++||||+||||+|+... +..+|+.+++++|.+. +..+.+....+........ ... ... .....
T Consensus 12 ~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALAL 88 (272)
T ss_pred cCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHH
Confidence 3569999999999999987 8899999999999873 4444333333321100000 000 000 00122
Q ss_pred HHHHHhc--CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 151 LDEFLAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 151 ~~~~~~~--~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
+.+.+.. ...+++||+.++|+.|+++|++++|+||+ ....++.+++++|+..+|+.+ ++.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~i-~~~d~~~---------- 154 (272)
T PRK13223 89 FMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRWI-IGGDTLP---------- 154 (272)
T ss_pred HHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeEE-EecCCCC----------
Confidence 3333322 23568999999999999999999999995 567888999999999988864 3332221
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
..||+|++ |+.+++++|++|++|++|||+.+||+
T Consensus 155 --------------------------------~~Kp~p~~--------------~~~~~~~~g~~~~~~l~IGD~~~Di~ 188 (272)
T PRK13223 155 --------------------------------QKKPDPAA--------------LLFVMKMAGVPPSQSLFVGDSRSDVL 188 (272)
T ss_pred --------------------------------CCCCCcHH--------------HHHHHHHhCCChhHEEEECCCHHHHH
Confidence 12999999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCCCccccc
Q 018946 309 GAQRIGMPCVVMRSRCITTLPVS 331 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~~~~~l~ 331 (348)
+|+++||++++|.++.....++.
T Consensus 189 aA~~aGi~~i~v~~G~~~~~~l~ 211 (272)
T PRK13223 189 AAKAAGVQCVALSYGYNHGRPIA 211 (272)
T ss_pred HHHHCCCeEEEEecCCCCchhhh
Confidence 99999999999998776555443
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=193.20 Aligned_cols=200 Identities=15% Similarity=0.057 Sum_probs=129.4
Q ss_pred CCceEEEEecCCcccccccc--ChHHHHHHHH-HHcCCCCCCCCHHHHHHHHhcc---cCc----HHHHHHHHhhH-HHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRF--GNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKS---AGD----EDRMLVLFFNR-KNA 150 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~--~~~~a~~~~~-~~~gl~~~~~~~~~~~~l~~~~---~~~----~~~~~~~~~~~-~~~ 150 (348)
.++++|||||||||+|+... .+...+.+.+ +..|++ . ++.+..+.+.. ... ........... ...
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~~~~~~~~~~~~~~~~~G~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFDNYFWQKLVPETLGAQRGIS---P-QEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLDICA 83 (224)
T ss_pred ccCCEEEEcCCCCccchhhhchHHHhhHHHHHHHHhCcC---H-HHHHHHHHHHHHHHcCccceecHHHHHHHhCCCHHH
Confidence 45789999999999996421 1223232223 566775 2 22222221110 000 00111110100 001
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
+...+ .....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.++.+. ++.
T Consensus 84 ~~~~~-~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~iv~s~-~~~------------ 146 (224)
T PRK14988 84 MTTEQ-GPRAVLREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDLLLSTH-TFG------------ 146 (224)
T ss_pred HHHHH-hccCCcCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCEEEEee-eCC------------
Confidence 11111 234678999999999999999999999995 5678888899999999998765443 221
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|++ |+.+++++|++|++|+||||+..|+++|
T Consensus 147 ------------------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA 182 (224)
T PRK14988 147 ------------------------------YPKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAA 182 (224)
T ss_pred ------------------------------CCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHH
Confidence 12999999 9999999999999999999999999999
Q ss_pred HHcCCcE-EEECCCCCCcccccccc-cchhHHHHhhcc
Q 018946 311 QRIGMPC-VVMRSRCITTLPVSKTQ-RLADMLCRILKS 346 (348)
Q Consensus 311 ~~aG~~~-i~v~~~~~~~~~l~~~~-~~~d~l~~~l~~ 346 (348)
+++||.+ ++|.++........... ..++++.+.+..
T Consensus 183 ~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (224)
T PRK14988 183 AQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPS 220 (224)
T ss_pred HHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhh
Confidence 9999984 67877665433221111 125555555544
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=188.70 Aligned_cols=174 Identities=15% Similarity=0.207 Sum_probs=124.5
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHH--Hhcc--------cCcHHHHHHH----Hhh-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL--LRKS--------AGDEDRMLVL----FFN- 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l--~~~~--------~~~~~~~~~~----~~~- 146 (348)
|++++|+||+||||+|.. ...+++++++++|++ ++.+.+..+ .+.. ......+... ...
T Consensus 1 m~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (224)
T PRK09449 1 MKYDWILFDADETLFHFD---AFAGLQRMFSRYGVD---FTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEK 74 (224)
T ss_pred CCccEEEEcCCCchhcch---hhHHHHHHHHHhCCC---CcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 457899999999999854 347889999999986 344333322 1110 0001111100 000
Q ss_pred -------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhh
Q 018946 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (348)
Q Consensus 147 -------~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~ 219 (348)
....+.+.+.. ...++||+.++|+.|+ +|++++|+||+ ....++..++.+|+..+|+.++.+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v~~~~~~~-- 147 (224)
T PRK09449 75 LNVTPGELNSAFLNAMAE-ICTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLLVISEQVG-- 147 (224)
T ss_pred cCCCHHHHHHHHHHHHhh-cCccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEEEEECccC--
Confidence 01222232222 3678999999999999 58999999995 5688888999999999998876543221
Q ss_pred hhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-CcEE
Q 018946 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCF 298 (348)
Q Consensus 220 ~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p-~~~i 298 (348)
..||+|++ |+.+++++|+.+ ++|+
T Consensus 148 -----------------------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 148 -----------------------------------------VAKPDVAI--------------FDYALEQMGNPDRSRVL 172 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHcCCCCcccEE
Confidence 12999999 999999999854 8999
Q ss_pred EEecCH-hhHHHHHHcCCcEEEECCC
Q 018946 299 LIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~i~v~~~ 323 (348)
||||+. +|+.+|+++||.+|++..+
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 999998 6999999999999999753
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-23 Score=186.52 Aligned_cols=177 Identities=15% Similarity=0.222 Sum_probs=128.9
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHh----------cccCcHHHHH----HHHhh---
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR----------KSAGDEDRML----VLFFN--- 146 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~----------~~~~~~~~~~----~~~~~--- 146 (348)
+++|+||+||||+|+... +..+|.++++++|++. +......... .......... ...+.
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPL---TEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCc---cHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 479999999999999986 7788999999999863 2222211111 0001111100 00000
Q ss_pred -------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhh
Q 018946 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (348)
Q Consensus 147 -------~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~ 219 (348)
....+.+.+. ....++||+.++|+.|+++ ++++|+||+ ....++.+++.+|+..+|+.++.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~fd~i~~~~~~~-- 149 (224)
T TIGR02254 77 TEADEALLNQKYLRFLE-EGHQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPFFDDIFVSEDAG-- 149 (224)
T ss_pred CCCcHHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhhcCEEEEcCccC--
Confidence 0122222222 2357899999999999999 999999996 5688899999999999998765443321
Q ss_pred hhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc-CCCCCcEE
Q 018946 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCF 298 (348)
Q Consensus 220 ~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l-gv~p~~~i 298 (348)
..||+|++ |+.+++++ |++|++|+
T Consensus 150 -----------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 150 -----------------------------------------IQKPDKEI--------------FNYALERMPKFSKEEVL 174 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHhcCCCchheE
Confidence 13999999 99999999 99999999
Q ss_pred EEecCH-hhHHHHHHcCCcEEEECCCCCC
Q 018946 299 LIAGSQ-SGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
||||+. +|+.+|+++||++|++..+...
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~~~~ 203 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPDMHP 203 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCC
Confidence 999998 7999999999999999875443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=187.02 Aligned_cols=170 Identities=17% Similarity=0.223 Sum_probs=121.9
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHH----HHHh----------cc-cCcHH----HHHHHHh
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT----DLLR----------KS-AGDED----RMLVLFF 145 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~----~l~~----------~~-~~~~~----~~~~~~~ 145 (348)
++|+||+||||+|+... +..+|+++++++|++ ++..... .... .. +.... .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999886 889999999999997 3332211 1110 00 11111 1111111
Q ss_pred hH---------H---HHHHHHHh-cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheee
Q 018946 146 NR---------K---NALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (348)
Q Consensus 146 ~~---------~---~~~~~~~~-~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~ 212 (348)
.. . +.+.+.+. .....++||+.++|+.|+++|++++|+||+. ..++..++.+|+..+|+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~----~~~~~~l~~~~l~~~fd~i~~ 152 (203)
T TIGR02252 77 GRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFD----SRLRGLLEALGLLEYFDFVVT 152 (203)
T ss_pred HhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCc----hhHHHHHHHCCcHHhcceEEe
Confidence 10 1 11222121 2235789999999999999999999999962 345788999999999987654
Q ss_pred cchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC
Q 018946 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (348)
Q Consensus 213 ~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv 292 (348)
+.+ +. ..||+|++ |+.+++++|+
T Consensus 153 s~~-~~------------------------------------------~~KP~~~~--------------~~~~~~~~~~ 175 (203)
T TIGR02252 153 SYE-VG------------------------------------------AEKPDPKI--------------FQEALERAGI 175 (203)
T ss_pred ecc-cC------------------------------------------CCCCCHHH--------------HHHHHHHcCC
Confidence 432 11 23999999 9999999999
Q ss_pred CCCcEEEEecCH-hhHHHHHHcCCcEEE
Q 018946 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVV 319 (348)
Q Consensus 293 ~p~~~i~VGDs~-~Di~aA~~aG~~~i~ 319 (348)
+|++|+||||+. +||.+|+++||++|+
T Consensus 176 ~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 176 SPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred ChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999997 899999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=186.11 Aligned_cols=106 Identities=16% Similarity=0.236 Sum_probs=93.3
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..+++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.++.+. ++.
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~-~~~-------------------- 145 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDAVLSAD-AVR-------------------- 145 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhheeEehh-hcC--------------------
Confidence 3678999999999999999999999996 5688899999999999998765433 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||++|
T Consensus 146 ----------------------~~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 146 ----------------------AYKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 13999999 999999999999999999999999999999999999
Q ss_pred EECCCC
Q 018946 319 VMRSRC 324 (348)
Q Consensus 319 ~v~~~~ 324 (348)
++..+.
T Consensus 190 ~v~r~~ 195 (198)
T TIGR01428 190 WVNRPG 195 (198)
T ss_pred EecCCC
Confidence 998644
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-23 Score=178.67 Aligned_cols=167 Identities=23% Similarity=0.373 Sum_probs=126.4
Q ss_pred EEEecCCccccccccChHHHHHH-HHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH--------HHHHHHHHhc
Q 018946 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR--------KNALDEFLAS 157 (348)
Q Consensus 87 viFDvDGTL~d~~~~~~~~a~~~-~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 157 (348)
|+||+||||+|+... +..+|.. +++.++.+ ++.+.+....+.. ...+....+.. .+.+.++...
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELFGKS---YEEALERLLERFGIDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHhCCC---HHHHHHHhhhccchhHHHHHHHhhhhhhh
Confidence 799999999998875 6788887 47778775 4334444433222 22222111111 2334443222
Q ss_pred CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchh
Q 018946 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
...+++||+.++|+.|+++|++++++||+ ....++..++++|+.++|+.++.+.+ ..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~~~-~~------------------- 130 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISSDD-VG------------------- 130 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEGGG-SS-------------------
T ss_pred hccchhhhhhhhhhhcccccceeEEeecC---Ccccccccccccccccccccccccch-hh-------------------
Confidence 45789999999999999999999999995 57888999999999999997754432 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++
T Consensus 131 -----------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 -----------------------SRKPDPDA--------------YRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp -----------------------SSTTSHHH--------------HHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred -----------------------hhhhHHHH--------------HHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 12999999 99999999999999999999999999999999999
Q ss_pred EEE
Q 018946 318 VVM 320 (348)
Q Consensus 318 i~v 320 (348)
|+|
T Consensus 174 i~v 176 (176)
T PF13419_consen 174 IWV 176 (176)
T ss_dssp EEE
T ss_pred EeC
Confidence 986
|
... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=204.92 Aligned_cols=194 Identities=11% Similarity=0.116 Sum_probs=135.9
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCC--CCCC-CHHHHHHHHhcccCcHHHHHHHHhhH------HHHH-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CANW-TAPIYTDLLRKSAGDEDRMLVLFFNR------KNAL- 151 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~--~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~- 151 (348)
+++++||||+||||+|+... +..+|++++++++.. +..+ +.+.+...++................ ...+
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~ 317 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLEIREQTDAYFL 317 (459)
T ss_pred HhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchhHHHHHHHHHH
Confidence 44689999999999999998 899999999997421 0011 33445555443321111110000000 1122
Q ss_pred ---HHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 152 ---DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 152 ---~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
.+.+.....+++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|+.++. .+++..
T Consensus 318 ~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~---~~~~~~~~l~~~~l~~~f~~i~~-~d~v~~--------- 384 (459)
T PRK06698 318 ERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNG---LTEYLRAIVSYYDLDQWVTETFS-IEQINS--------- 384 (459)
T ss_pred HHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHCCcHhhcceeEe-cCCCCC---------
Confidence 22222335688999999999999999999999995 67899999999999999987643 332211
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
||.|++ |..++++++ |++|++|||+.+|+.
T Consensus 385 ----------------------------------~~kP~~--------------~~~al~~l~--~~~~v~VGDs~~Di~ 414 (459)
T PRK06698 385 ----------------------------------LNKSDL--------------VKSILNKYD--IKEAAVVGDRLSDIN 414 (459)
T ss_pred ----------------------------------CCCcHH--------------HHHHHHhcC--cceEEEEeCCHHHHH
Confidence 666778 888998875 789999999999999
Q ss_pred HHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 309 GAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
+|+++||.+|++.++......+..+..++++
T Consensus 415 aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~ 445 (459)
T PRK06698 415 AAKDNGLIAIGCNFDFAQEDELAQADIVIDD 445 (459)
T ss_pred HHHHCCCeEEEEeCCCCcccccCCCCEEeCC
Confidence 9999999999999876655455444444333
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-22 Score=220.90 Aligned_cols=181 Identities=20% Similarity=0.290 Sum_probs=136.1
Q ss_pred CCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH-----hhH-------
Q 018946 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-----FNR------- 147 (348)
Q Consensus 80 ~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~------- 147 (348)
..+++++|||||||||+|+... +..+|+++++++|++ ++.+.+....+............. ...
T Consensus 71 ~~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 146 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRF 146 (1057)
T ss_pred cCCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 3467899999999999999987 899999999999986 666655555543211111000000 000
Q ss_pred HHHHHHHHh-cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc-ccchheeecchhhhhhhcccc
Q 018946 148 KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 148 ~~~~~~~~~-~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~-~~f~~~i~~~~e~~~~~~~~~ 225 (348)
.+.+.+.+. .....++||+.++|+.|+++|++++|+||+ ....++..++++|+. .+|+.++.+ +++.
T Consensus 147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~iv~~-~~~~------- 215 (1057)
T PLN02919 147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDAIVSA-DAFE------- 215 (1057)
T ss_pred HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCEEEEC-cccc-------
Confidence 112222221 122347999999999999999999999995 567888999999996 788866433 2221
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
..||+|++ |+.+++++|++|++|++|||+..
T Consensus 216 -----------------------------------~~KP~Pe~--------------~~~a~~~lgv~p~e~v~IgDs~~ 246 (1057)
T PLN02919 216 -----------------------------------NLKPAPDI--------------FLAAAKILGVPTSECVVIEDALA 246 (1057)
T ss_pred -----------------------------------cCCCCHHH--------------HHHHHHHcCcCcccEEEEcCCHH
Confidence 12999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCC
Q 018946 306 GVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~ 324 (348)
|+++|+++||++|+|.++.
T Consensus 247 Di~AA~~aGm~~I~v~~~~ 265 (1057)
T PLN02919 247 GVQAARAAGMRCIAVTTTL 265 (1057)
T ss_pred HHHHHHHcCCEEEEECCCC
Confidence 9999999999999999875
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-22 Score=181.48 Aligned_cols=189 Identities=22% Similarity=0.294 Sum_probs=130.3
Q ss_pred cCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh------h-------HHHHHHHHHhc
Q 018946 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF------N-------RKNALDEFLAS 157 (348)
Q Consensus 91 vDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~ 157 (348)
|||||+|+... +..+|+++++++|++ ++.+.+...++.............. . +...+.++.
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 74 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLF-- 74 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH--
Confidence 79999999987 999999999999996 4555455454433211111111100 0 011122221
Q ss_pred CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecch-hhhhhhcccccccccccCCch
Q 018946 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~-e~~~~~~~~~v~g~~v~~~~~ 236 (348)
...+++||+.++|+.|+++|++++|+||+.+ ........+..++.++|+.++.+.+ ++.
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~--~~~~~~~~~~~~l~~~f~~i~~~~~~~~~------------------ 134 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHK--RHFDLKTQRHGELFSLMHHVVTGDDPEVK------------------ 134 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCch--hhHHHHHcccHHHHhhCCEEEECChhhcc------------------
Confidence 2367899999999999999999999999621 2233334444577778876543331 221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg---v~p~~~i~VGDs~~Di~aA~~a 313 (348)
..||+|++ |+.++++++ ++|++|+||||+..|+++|+++
T Consensus 135 ------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~a 176 (220)
T PLN02811 135 ------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNA 176 (220)
T ss_pred ------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEeccHhhHHHHHHC
Confidence 13999999 999999996 9999999999999999999999
Q ss_pred CCcEEEECCCCCCcccccccccchhHHHHhhccc
Q 018946 314 GMPCVVMRSRCITTLPVSKTQRLADMLCRILKSI 347 (348)
Q Consensus 314 G~~~i~v~~~~~~~~~l~~~~~~~d~l~~~l~~i 347 (348)
||++|+|.++......+. .++.+++.+.++
T Consensus 177 G~~~i~v~~~~~~~~~~~----~~d~vi~~~~e~ 206 (220)
T PLN02811 177 GMSVVMVPDPRLDKSYCK----GADQVLSSLLDF 206 (220)
T ss_pred CCeEEEEeCCCCcHhhhh----chhhHhcCHhhC
Confidence 999999987654433332 366666666554
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-22 Score=183.50 Aligned_cols=176 Identities=16% Similarity=0.116 Sum_probs=118.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCC---CCCCCHHHHHHHHhcc---cCc----HH----HHHHHHhhH-
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKS---AGD----ED----RMLVLFFNR- 147 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~---~~~~~~~~~~~l~~~~---~~~----~~----~~~~~~~~~- 147 (348)
.+++|+||+||||+|+... +..+|+++++.++.. ...|....+..+.... ... .. ......+..
T Consensus 9 ~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 4689999999999999886 778888877654211 1134333333222210 000 00 000000000
Q ss_pred ----H---H---HHHHHHh--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecch
Q 018946 148 ----K---N---ALDEFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (348)
Q Consensus 148 ----~---~---~~~~~~~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~ 215 (348)
. . ...+.+. .....++||+.++|+.|++. ++++|+||+.. . ++.+|+.++|+.++.+.
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~---~-----~~~~gl~~~fd~i~~~~- 157 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNA---Q-----PELFGLGDYFEFVLRAG- 157 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCc---h-----HHHCCcHHhhceeEecc-
Confidence 0 0 1111111 12367899999999999975 99999999732 2 47889999998765433
Q ss_pred hhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCC
Q 018946 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 295 (348)
Q Consensus 216 e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~ 295 (348)
++. ..||+|++ |+.+++++|++|+
T Consensus 158 ~~~------------------------------------------~~KP~p~~--------------~~~a~~~~~~~~~ 181 (238)
T PRK10748 158 PHG------------------------------------------RSKPFSDM--------------YHLAAEKLNVPIG 181 (238)
T ss_pred cCC------------------------------------------cCCCcHHH--------------HHHHHHHcCCChh
Confidence 221 12999999 9999999999999
Q ss_pred cEEEEecC-HhhHHHHHHcCCcEEEECCCCC
Q 018946 296 NCFLIAGS-QSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 296 ~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
+|+||||+ ..|+.+|+++||.+|++.....
T Consensus 182 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 212 (238)
T PRK10748 182 EILHVGDDLTTDVAGAIRCGMQACWINPENG 212 (238)
T ss_pred HEEEEcCCcHHHHHHHHHCCCeEEEEcCCCc
Confidence 99999999 5999999999999999987543
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=174.46 Aligned_cols=173 Identities=14% Similarity=0.121 Sum_probs=117.4
Q ss_pred EEEEecCCccccccccChHHHHHHHHH-----HcCCCCCCCCHHHHH-HHHhcccCcHHHHHHHHhhHHHHHHHHHhc--
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNRKNALDEFLAS-- 157 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~-----~~gl~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (348)
+||||+||||+|+... +..+|++++. ++|++. .+..... ......+.....+..........+.+.+..
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREYGTTLAGLMILHEIDADEYLRYVHGRL 78 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHHchHHHHHHHhhCCCHHHHHHHHhccC
Confidence 7999999999999876 6788887654 557652 1111111 111111111111111100001222222222
Q ss_pred --CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 158 --KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 158 --~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
....++||+.++|+.|+ .+++|+||+ ....+...++.+|+..+|+.++.+.+ +... .
T Consensus 79 ~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~~~~-~~~~--------~------ 137 (184)
T TIGR01993 79 PYEKLKPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDGIFCFDT-ANPD--------Y------ 137 (184)
T ss_pred CHHhCCCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCeEEEeec-ccCc--------c------
Confidence 23568999999999997 489999996 56889999999999999997654332 2110 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
.+.||+|++ |+.+++++|++|++|+||||+..|+.+|+++||
T Consensus 138 ------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 138 ------------------------LLPKPSPQA--------------YEKALREAGVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCC
Confidence 012999999 999999999999999999999999999999999
Q ss_pred cEEEE
Q 018946 316 PCVVM 320 (348)
Q Consensus 316 ~~i~v 320 (348)
++|+|
T Consensus 180 ~~i~v 184 (184)
T TIGR01993 180 KTVLV 184 (184)
T ss_pred EEeeC
Confidence 99875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-22 Score=178.78 Aligned_cols=176 Identities=14% Similarity=0.123 Sum_probs=115.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhccc-----------CcHHHHHHHH---hhH--
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-----------GDEDRMLVLF---FNR-- 147 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~---~~~-- 147 (348)
+++||||+||||+|+.. +..+|...+...|++. ......+.+... .....+...+ ++.
T Consensus 2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 75 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLKD----FIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRL 75 (211)
T ss_pred ceEEEEecCCceecCHH--HHHHHHHHcCCCCCcc----HHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhcccc
Confidence 57999999999999864 4566766655455431 111111211111 0011111110 000
Q ss_pred -----HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhc
Q 018946 148 -----KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222 (348)
Q Consensus 148 -----~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~ 222 (348)
...+.........+++||+.++|+.|+++|++++|+||... ........+..+++..+|+.++.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~-~~~~~~~~~~~~~l~~~fd~v~~s~~~~----- 149 (211)
T TIGR02247 76 GHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFP-TDHSAEEALLPGDIMALFDAVVESCLEG----- 149 (211)
T ss_pred CCCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCC-ccchhhhHhhhhhhHhhCCEEEEeeecC-----
Confidence 00111112223567899999999999999999999999632 1111223344567888888765433221
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 223 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
..||+|++ |+.+++++|++|++|+||||
T Consensus 150 --------------------------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D 177 (211)
T TIGR02247 150 --------------------------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDD 177 (211)
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcC
Confidence 13999999 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcEEEECCC
Q 018946 303 SQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 303 s~~Di~aA~~aG~~~i~v~~~ 323 (348)
+..|+.+|+++||++|++.+.
T Consensus 178 ~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 178 LGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999763
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-21 Score=171.86 Aligned_cols=165 Identities=13% Similarity=0.078 Sum_probs=121.0
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc---------HHHHHHHH--------hhH
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD---------EDRMLVLF--------FNR 147 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~--------~~~ 147 (348)
++||||+||||+|+... +..+|+++++++|.. ..+.+.+....+..... ........ ...
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTL 77 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccH
Confidence 47999999999999997 999999999999853 25566666665532210 00100000 000
Q ss_pred ---HHHHHHHHhcC------------CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheee
Q 018946 148 ---KNALDEFLASK------------DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (348)
Q Consensus 148 ---~~~~~~~~~~~------------~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~ 212 (348)
...+.+++... ...+.+++.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 78 EAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred HHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCC---CHHHHHHHHHHcCchhhCCEEEe
Confidence 12333433221 1245667799999999999999999995 67899999999999999986543
Q ss_pred cchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC
Q 018946 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (348)
Q Consensus 213 ~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv 292 (348)
.+++. . ||+|++ |..+++++|+
T Consensus 155 -~~~~~------------------------------------------~-KP~p~~--------------~~~~~~~~~~ 176 (197)
T TIGR01548 155 -MEDCP------------------------------------------P-KPNPEP--------------LILAAKALGV 176 (197)
T ss_pred -ecCCC------------------------------------------C-CcCHHH--------------HHHHHHHhCc
Confidence 32221 1 999999 9999999999
Q ss_pred CCCcEEEEecCHhhHHHHHHc
Q 018946 293 PVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 293 ~p~~~i~VGDs~~Di~aA~~a 313 (348)
+|++|++|||+.+|+.+|+++
T Consensus 177 ~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 177 EACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcccEEEEeCCHHHHHHHHhC
Confidence 999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=179.51 Aligned_cols=188 Identities=15% Similarity=0.169 Sum_probs=138.5
Q ss_pred CCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhc--------------ccC-cHHHHHH--
Q 018946 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK--------------SAG-DEDRMLV-- 142 (348)
Q Consensus 80 ~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~--------------~~~-~~~~~~~-- 142 (348)
..+++|+|+||++|||+....- ....|.++.+.+|+++. .......+.. ..+ -...-++
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYD---DSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCC---HHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578899999999999985443 56899999999999842 1222111111 111 0111111
Q ss_pred ---HHhhH------HHHH----HHHHhc---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 143 ---LFFNR------KNAL----DEFLAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 143 ---~~~~~------~~~~----~~~~~~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
..+.. +..+ ...+.. ......+++.++++.||.+|..++++|| ++...+.++..+|+..+
T Consensus 79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN----~d~r~~~~l~~~~l~~~ 154 (237)
T KOG3085|consen 79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISN----FDDRLRLLLLPLGLSAY 154 (237)
T ss_pred HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecC----CcHHHHHHhhccCHHHh
Confidence 11111 1111 111112 2466788999999999999999999999 57888899999999999
Q ss_pred chheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHH
Q 018946 207 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 286 (348)
Q Consensus 207 f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a 286 (348)
||.+++|++++.. ||||+| |+.+
T Consensus 155 fD~vv~S~e~g~~-------------------------------------------KPDp~I--------------f~~a 177 (237)
T KOG3085|consen 155 FDFVVESCEVGLE-------------------------------------------KPDPRI--------------FQLA 177 (237)
T ss_pred hhhhhhhhhhccC-------------------------------------------CCChHH--------------HHHH
Confidence 9999888876644 999999 9999
Q ss_pred HHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccc
Q 018946 287 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSK 332 (348)
Q Consensus 287 ~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ 332 (348)
++++|+.|++|+||||.. +|+++|+++||.+++|.+..+....+..
T Consensus 178 l~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 178 LERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred HHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 999999999999999975 7899999999999999987766655544
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-21 Score=168.65 Aligned_cols=100 Identities=22% Similarity=0.295 Sum_probs=85.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++|+||+ .... ..++.++|+..+|+.++.+.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~---~~~~-~~~~~~~~l~~~f~~i~~~~~~~---------------------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNS---PRDH-AVLVQELGLRDLFDVVIFSGDVG---------------------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCC---chHH-HHHHHhcCCHHHCCEEEEcCCCC----------------------
Confidence 678999999999999999999999996 3344 55666699999998775543211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||.+|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 12999999 9999999999999999999999999999999999997
Q ss_pred E
Q 018946 320 M 320 (348)
Q Consensus 320 v 320 (348)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
|
HAD subfamilies caused by an overly broad single model. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-20 Score=169.83 Aligned_cols=179 Identities=22% Similarity=0.338 Sum_probs=132.9
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH----hhHHHH---HHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF----FNRKNA---LDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~---~~~~ 154 (348)
....+++||+||||+|++.+ ...+|+..++++|.. |+.......++....+..+..... ..+++. ..+.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 34569999999999999998 889999999999985 777777666665433222222100 011111 1111
Q ss_pred Hh--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcC-Ccccchheeecchhhhhhhcccccccccc
Q 018946 155 LA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 155 ~~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lg-l~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
.. -....+.||+.++++.|+.+|++++++|+. ........+++++ +...|...+.++ |..+
T Consensus 84 ~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s---~~~~~~~k~~~~~~~~~~f~~~v~~d-------------~~~v 147 (222)
T KOG2914|consen 84 LDRLFMNSILMPGAEKLVNHLKNNGIPVALATSS---TSASFELKISRHEDIFKNFSHVVLGD-------------DPEV 147 (222)
T ss_pred HHHhccccccCCcHHHHHHHHHhCCCCeeEEecC---CcccHHHHHHHhhHHHHhcCCCeecC-------------Cccc
Confidence 11 124678999999999999999999999996 4567777777776 555565554421 2222
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGA 310 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p-~~~i~VGDs~~Di~aA 310 (348)
..| ||+|++ |..+++++|..| +.|++++|++.++++|
T Consensus 148 ~~g----------------------------KP~Pdi--------------~l~A~~~l~~~~~~k~lVfeds~~Gv~aa 185 (222)
T KOG2914|consen 148 KNG----------------------------KPDPDI--------------YLKAAKRLGVPPPSKCLVFEDSPVGVQAA 185 (222)
T ss_pred cCC----------------------------CCCchH--------------HHHHHHhcCCCCccceEEECCCHHHHHHH
Confidence 333 999999 999999999999 9999999999999999
Q ss_pred HHcCCcEEEECC
Q 018946 311 QRIGMPCVVMRS 322 (348)
Q Consensus 311 ~~aG~~~i~v~~ 322 (348)
.++||++|+|.+
T Consensus 186 ~aagm~vi~v~~ 197 (222)
T KOG2914|consen 186 KAAGMQVVGVAT 197 (222)
T ss_pred HhcCCeEEEecC
Confidence 999999999998
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=170.58 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=94.5
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++.|++.++|+.++.+ ++++|+||+ ....+...++++|+.++|+.++++.+.+.
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~-------------------- 152 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISEDVGV-------------------- 152 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEeccccc--------------------
Confidence 478899999999999999 999999996 46889999999999999999877665432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
.||+|++ |+.+++++|++|++|+||||+. +||.+|+++||.+
T Consensus 153 -----------------------~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 153 -----------------------AKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred -----------------------CCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 2999999 9999999999999999999997 5779999999999
Q ss_pred EEECCCCC
Q 018946 318 VVMRSRCI 325 (348)
Q Consensus 318 i~v~~~~~ 325 (348)
|++..+..
T Consensus 196 vwi~~~~~ 203 (229)
T COG1011 196 VWINRGGK 203 (229)
T ss_pred EEECCCCC
Confidence 99987653
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=169.28 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=87.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
.+++||+.++|+.|+++|++++|+||+ ........+.. .++..+|+.++.+.+ +.
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~---~~~~~~~~~~~~~~l~~~fd~v~~s~~-~~-------------------- 138 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEVRAAADHIYLSQD-LG-------------------- 138 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCC---chhhHHHHHhhchhHHHhcCEEEEecc-cC--------------------
Confidence 468999999999999999999999996 33444444443 477788876654332 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.+||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++|
T Consensus 139 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 139 ----------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EECCCCCC
Q 018946 319 VMRSRCIT 326 (348)
Q Consensus 319 ~v~~~~~~ 326 (348)
++.++...
T Consensus 183 ~~~~~~~~ 190 (199)
T PRK09456 183 LVTDKQTI 190 (199)
T ss_pred EecCCccH
Confidence 99875443
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-20 Score=158.72 Aligned_cols=153 Identities=21% Similarity=0.317 Sum_probs=111.9
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHh-cCCCCCCC
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLA-SKDAPLRP 164 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~p 164 (348)
+|+||+||||+|+... ...+|+++++++|.+ .+.+....+.. ...+.. .. ..++++.. .......|
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~g~~---~~~~~~-~~---~~~~~~~~~~~~~~~~~ 67 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGED-----FQALKALRGLA---EELLYR-IA---TSFEELLGYDAEEAYIR 67 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhccc-----HHHHHHHHccC---hHHHHH-HH---HHHHHHhCcchhheecc
Confidence 4899999999999765 789999999998864 23333333221 111111 11 11222221 12345689
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHH
Q 018946 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (348)
Q Consensus 165 Gv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~ 244 (348)
|+.++|+.|+++|++++|+||+ ....+...++.+ +..+|+.++. .++..
T Consensus 68 g~~e~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~~-l~~~f~~i~~-~~~~~-------------------------- 116 (154)
T TIGR01549 68 GAADLLKRLKEAGIKLGIISNG---SLRAQKLLLRKH-LGDYFDLILG-SDEFG-------------------------- 116 (154)
T ss_pred CHHHHHHHHHHCcCeEEEEeCC---chHHHHHHHHHH-HHhcCcEEEe-cCCCC--------------------------
Confidence 9999999999999999999996 467788888887 7777775543 22211
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 245 k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
.||+|++ |..+++++|++| +|+||||+..|+.+|+++|
T Consensus 117 -----------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 -----------------AKPEPEI--------------FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -----------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2999999 999999999999 9999999999999999988
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-20 Score=163.75 Aligned_cols=170 Identities=11% Similarity=0.100 Sum_probs=110.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc-HHHHHH---HHh-hHHHHHHHHHhcC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLV---LFF-NRKNALDEFLASK 158 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~~~ 158 (348)
+++||||+||||+|.. .+|.++++++|++ . +.+...++..... ...+.. ... ...+.+.+.....
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~---~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIP---T--DHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNSDFIR 71 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCC---H--HHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHHHHHH
Confidence 6799999999999943 5678888888886 2 2222222221110 011100 000 0011121111112
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|++. ++++++||+ ........++.+++..+|... |+.++.++.
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~---~~~~~~~~~~~~~l~~~f~~~-----------f~~i~~~~~-------- 128 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTAL---GDSIDALLNRQFNLNALFPGA-----------FSEVLMCGH-------- 128 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCC---ccchhHHHHhhCCHHHhCCCc-----------ccEEEEecc--------
Confidence 356899999999999997 578888996 334555567788887665421 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCc
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMP 316 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a--G~~ 316 (348)
.||+|++ |+.+++++| |++|+||||+..|+.+|+++ ||+
T Consensus 129 -----------------------~~~kp~~--------------~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 129 -----------------------DESKEKL--------------FIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred -----------------------CcccHHH--------------HHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 1666778 999999999 89999999999999999999 999
Q ss_pred EEEECCCCC
Q 018946 317 CVVMRSRCI 325 (348)
Q Consensus 317 ~i~v~~~~~ 325 (348)
+|++.++..
T Consensus 170 ~i~~~~~~~ 178 (197)
T PHA02597 170 VIHMLRGER 178 (197)
T ss_pred EEEecchhh
Confidence 999988754
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-19 Score=163.63 Aligned_cols=178 Identities=16% Similarity=0.146 Sum_probs=117.3
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH---h-h-HHHHHHHHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---F-N-RKNALDEFL 155 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~-~-~~~~~~~~~ 155 (348)
.++.++++|||||||+++.. |.++++.+|.+. -....+....... .......... + . ....+.++.
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE--EVSEITERAMRGE-LDFKASLRERVALLKGLPVELLKEVR 81 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH--HHHHHHHHHHcCC-CCHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44578999999999999753 466677777641 1112222222111 1111111111 1 1 123334433
Q ss_pred hcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 156 ~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
. ..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|...+...+. .+.+.+.+...
T Consensus 82 ~--~~~~~~g~~~~l~~l~~~g~~~~IvS~~---~~~~~~~~l~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~---- 148 (219)
T TIGR00338 82 E--NLPLTEGAEELVKTLKEKGYKVAVISGG---FDLFAEHVKDKLGLDAAFANRLEVEDG----KLTGLVEGPIV---- 148 (219)
T ss_pred h--cCCcCCCHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHcCCCceEeeEEEEECC----EEEEEecCccc----
Confidence 2 3578999999999999999999999995 678999999999999888655433211 11111222110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
..+|.|++ |+.++++++++|++|+||||+.+|+.+|+.+|+
T Consensus 149 -------------------------~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~ 189 (219)
T TIGR00338 149 -------------------------DASYKGKT--------------LLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189 (219)
T ss_pred -------------------------CCcccHHH--------------HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCC
Confidence 01455666 999999999999999999999999999999999
Q ss_pred cEEE
Q 018946 316 PCVV 319 (348)
Q Consensus 316 ~~i~ 319 (348)
.+++
T Consensus 190 ~i~~ 193 (219)
T TIGR00338 190 GIAF 193 (219)
T ss_pred eEEe
Confidence 8654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-18 Score=153.16 Aligned_cols=182 Identities=12% Similarity=0.129 Sum_probs=115.4
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHH---Hh-h-----HHHHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FF-N-----RKNALDE 153 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~-~-----~~~~~~~ 153 (348)
.+++|+||+||||++.... |..+...+|.+. ....... ............... .+ . ....+.+
T Consensus 3 ~~k~viFD~DGTLid~~~~-----~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSS-----WEYLHRRLETCG--LAKKNAE-LFFSGRISYEEWARLDASLWKRRSGRLRREEVEE 74 (201)
T ss_pred cceEEEEeCCCCCcCCccH-----HHHHHHHhCchH--HHHHHHH-HHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHH
Confidence 3679999999999997642 344444455541 1111111 111111111111100 00 0 0223444
Q ss_pred HHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 154 ~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.+. ..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|...+...+...
T Consensus 75 ~~~--~~~~~~g~~e~l~~l~~~g~~~~IvS~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~g~--------------- 134 (201)
T TIGR01491 75 IFK--EISLRDYAEELVRWLKEKGLKTAIVSGG---IMCLAKKVAEKLNPDYVYSNELVFDEKGF--------------- 134 (201)
T ss_pred HHH--hCCCCccHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHhCCCeEEEEEEEEcCCCe---------------
Confidence 432 3579999999999999999999999995 67899999999999887765544332110
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
.||++... ..++++.++ ++.+++++|+++++|++|||+.+|+.+|+.+
T Consensus 135 ----------------------------~~p~~~~~-~~~~~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~a 182 (201)
T TIGR01491 135 ----------------------------IQPDGIVR-VTFDNKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVA 182 (201)
T ss_pred ----------------------------EecceeeE-EccccHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhc
Confidence 03332210 012222222 7788899999999999999999999999999
Q ss_pred CCcEEEECCCC
Q 018946 314 GMPCVVMRSRC 324 (348)
Q Consensus 314 G~~~i~v~~~~ 324 (348)
|+.+++.+++.
T Consensus 183 g~~~a~~~~~~ 193 (201)
T TIGR01491 183 DISISLGDEGH 193 (201)
T ss_pred CCeEEECCCcc
Confidence 99988876544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=159.32 Aligned_cols=183 Identities=14% Similarity=0.105 Sum_probs=114.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH---hhHHHHHHHHHhcC
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---FNRKNALDEFLASK 158 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 158 (348)
+.+|+|+|||||||++++. +..+++.+|... .| .+....+.+......+.+.... ....+.+.+++...
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAGE-AV-AEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKR 81 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCChH-HH-HHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 4578999999999999754 377788888741 12 2223333332222112121110 01123445555444
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--ccchheeecchhhhhhhcccccccccccCCch
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
...++||+.++|+.|+++|++++|+|++ ....++.+++.+|+. .+|...+...++ +.+.|.......
T Consensus 82 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~~l~~~gi~~~~~~~~~~~~~~~-------g~~~g~~~~~~~- 150 (224)
T PLN02954 82 PPRLSPGIPELVKKLRARGTDVYLVSGG---FRQMIAPVAAILGIPPENIFANQILFGDS-------GEYAGFDENEPT- 150 (224)
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHhCCChhhEEEeEEEEcCC-------CcEECccCCCcc-
Confidence 4568999999999999999999999995 678999999999997 355433221111 111111000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
...+|.|++ ++.+++++|. ++|++|||+.+|+.+|+.+|+.
T Consensus 151 -----------------------~~~~~K~~~--------------i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 151 -----------------------SRSGGKAEA--------------VQHIKKKHGY--KTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred -----------------------cCCccHHHH--------------HHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCC
Confidence 000233344 7888888885 6999999999999999998888
Q ss_pred EEEECC
Q 018946 317 CVVMRS 322 (348)
Q Consensus 317 ~i~v~~ 322 (348)
+++...
T Consensus 192 ~~~~~~ 197 (224)
T PLN02954 192 LFIGYG 197 (224)
T ss_pred EEEecC
Confidence 766543
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-19 Score=157.24 Aligned_cols=158 Identities=16% Similarity=0.181 Sum_probs=105.7
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHH-----HHHHHHhcccCcHH---HHHHHH---hhH------H
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-----IYTDLLRKSAGDED---RMLVLF---FNR------K 148 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~-----~~~~l~~~~~~~~~---~~~~~~---~~~------~ 148 (348)
+|+||+||||+|++.. +..+++.++.+.+.....|+.. ......+....-.+ ...... ++. .
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPKYG 79 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 5899999999999976 7788888777644210012211 11111111111001 011111 100 1
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
..+.+.+ ..++++||+.++|+ +++|+||+ ....++..++++|+..+|+.+ ++.+++..
T Consensus 80 ~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v-~~~~~~~~--------- 137 (175)
T TIGR01493 80 ERLRDAY--KNLPPWPDSAAALA-------RVAILSNA---SHWAFDQFAQQAGLPWYFDRA-FSVDTVRA--------- 137 (175)
T ss_pred HHHHHHH--hcCCCCCchHHHHH-------HHhhhhCC---CHHHHHHHHHHCCCHHHHhhh-ccHhhcCC---------
Confidence 1222222 24678999999998 48999996 568889999999999999875 44444322
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
.||+|++ |+.+++++|++|++|+||||+.+|+.
T Consensus 138 ---------------------------------~KP~p~~--------------f~~~~~~~~~~p~~~l~vgD~~~Di~ 170 (175)
T TIGR01493 138 ---------------------------------YKPDPVV--------------YELVFDTVGLPPDRVLMVAAHQWDLI 170 (175)
T ss_pred ---------------------------------CCCCHHH--------------HHHHHHHHCCCHHHeEeEecChhhHH
Confidence 3999999 99999999999999999999999999
Q ss_pred HHHHc
Q 018946 309 GAQRI 313 (348)
Q Consensus 309 aA~~a 313 (348)
+|+++
T Consensus 171 ~A~~~ 175 (175)
T TIGR01493 171 GARKF 175 (175)
T ss_pred HHhcC
Confidence 99864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-17 Score=159.31 Aligned_cols=179 Identities=15% Similarity=0.143 Sum_probs=117.8
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH--h--hHHHHHHHHHh
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF--F--NRKNALDEFLA 156 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~~ 156 (348)
...+++|+|||||||+.. ++|.++++..|... ......+..+.....-.+.+.... . .....+.++.
T Consensus 107 ~~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~~--~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~- 177 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI------ECIDEIAKLAGTGE--EVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVR- 177 (322)
T ss_pred ccCCCEEEEECCCCCcch------HHHHHHHHHhCCch--HHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHH-
Confidence 356789999999999843 55677777777742 111222222221111111111110 0 0122333333
Q ss_pred cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCch
Q 018946 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 157 ~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
. .++++||+.++|+.|+++|++++|+|++ +...++.+.+++|++..+...+. +..+.+++.+.|..+ .
T Consensus 178 ~-~l~l~pGa~elL~~Lk~~G~~~aIvSgg---~~~~~~~l~~~Lgld~~~an~le----i~dg~ltg~v~g~iv-~--- 245 (322)
T PRK11133 178 E-NLPLMPGLTELVLKLQALGWKVAIASGG---FTYFADYLRDKLRLDAAVANELE----IMDGKLTGNVLGDIV-D--- 245 (322)
T ss_pred H-hCCCChhHHHHHHHHHHcCCEEEEEECC---cchhHHHHHHHcCCCeEEEeEEE----EECCEEEeEecCccC-C---
Confidence 2 3789999999999999999999999996 56778889999999876543221 112223333333221 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
.||.+++ ++.+++++|+++++|++|||+.||+.++..+|+.
T Consensus 246 -------------------------~k~K~~~--------------L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlg 286 (322)
T PRK11133 246 -------------------------AQYKADT--------------LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLG 286 (322)
T ss_pred -------------------------cccHHHH--------------HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCe
Confidence 1555666 9999999999999999999999999999999999
Q ss_pred EEE
Q 018946 317 CVV 319 (348)
Q Consensus 317 ~i~ 319 (348)
+++
T Consensus 287 iA~ 289 (322)
T PRK11133 287 IAY 289 (322)
T ss_pred EEe
Confidence 887
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-17 Score=149.94 Aligned_cols=114 Identities=13% Similarity=0.069 Sum_probs=90.1
Q ss_pred HHHHHhcC--CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc---CCcccchheeecchhhhhhhcccc
Q 018946 151 LDEFLASK--DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 151 ~~~~~~~~--~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l---gl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
+.+.+.+. ..+++||+.++|+.|+++|++++|+||+ .....+.+++.+ ++..+|+..+. ..
T Consensus 83 w~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~---s~~~~~~~~~~~~~~~L~~~f~~~fd-----------~~ 148 (220)
T TIGR01691 83 WRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSG---SVPAQKLLFGHSDAGNLTPYFSGYFD-----------TT 148 (220)
T ss_pred HHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHhhccccchhhhcceEEE-----------eC
Confidence 44444433 3568999999999999999999999996 446667777765 56666654321 00
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
.| .||+|++ |..+++++|++|++|+||||+..
T Consensus 149 -~g---------------------------------~KP~p~~--------------y~~i~~~lgv~p~e~lfVgDs~~ 180 (220)
T TIGR01691 149 -VG---------------------------------LKTEAQS--------------YVKIAGQLGSPPREILFLSDIIN 180 (220)
T ss_pred -cc---------------------------------cCCCHHH--------------HHHHHHHhCcChhHEEEEeCCHH
Confidence 00 2999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCC
Q 018946 306 GVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~ 326 (348)
|+.+|+++||.+|++..+.+.
T Consensus 181 Di~AA~~AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 181 ELDAARKAGLHTGQLVRPGND 201 (220)
T ss_pred HHHHHHHcCCEEEEEECCCCC
Confidence 999999999999998876544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=146.77 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=89.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC----C--------chHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~----~--------~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.++||+.++|+.|+++|++++|+||.... . ......++..+++. |+.++.+.... .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~---------~ 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHP---------E 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCC---------c
Confidence 457899999999999999999999996310 0 02233445555554 33322211000 0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
+.+.. ++...++||+|++ |+.+++++|++|++|+||||+..||
T Consensus 94 ~~~~~-----------------------~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 94 GVEEF-----------------------RQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred ccccc-----------------------cCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 00000 0001235999999 9999999999999999999999999
Q ss_pred HHHHHcCCcE-EEECCCCCCcccccccccchhHHHHhhccc
Q 018946 308 AGAQRIGMPC-VVMRSRCITTLPVSKTQRLADMLCRILKSI 347 (348)
Q Consensus 308 ~aA~~aG~~~-i~v~~~~~~~~~l~~~~~~~d~l~~~l~~i 347 (348)
.+|+++|+++ +++.++......... .+|.+++.+.+|
T Consensus 137 ~aA~~aG~~~~i~v~~g~~~~~~~~~---~ad~~i~~~~el 174 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRTGKPITPEAEN---IADWVLNSLADL 174 (176)
T ss_pred HHHHHCCCcEEEEEecCCcccccccc---cCCEEeccHHHh
Confidence 9999999998 799887653322211 245555555443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-17 Score=146.53 Aligned_cols=112 Identities=14% Similarity=0.032 Sum_probs=83.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC----C--------chHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~----~--------~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.++||+.++|+.|+++|++++|+||.... + ...+..+++++|+ .|+.++.+... .
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~----------~ 95 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHH----------P 95 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCC----------C
Confidence 357899999999999999999999996310 0 1233445666665 24433322110 0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
++.+ ...||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 96 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 96 EDGC----------------------------DCRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred CCCC----------------------------cCCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHH
Confidence 0001 123999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCC
Q 018946 308 AGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~ 325 (348)
.+|+++||.+|++.++..
T Consensus 134 ~~A~~aG~~~i~v~~g~~ 151 (181)
T PRK08942 134 QAAAAAGVTPVLVRTGKG 151 (181)
T ss_pred HHHHHCCCeEEEEcCCCC
Confidence 999999999999987754
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-17 Score=141.77 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCC------------chHHHHHHHHcCCccc--chheeecchhhhhhhccccc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERI--SKIKIVGNEEVERSLYGQFV 226 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~------------~~~~~~il~~lgl~~~--f~~~i~~~~e~~~~~~~~~v 226 (348)
.++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+... +.......+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNC--------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCC---------
Confidence 478999999999999999999999963100 1456677888888632 11110001100
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 018946 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (348)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~D 306 (348)
+.+||+|++ |+.+++++|++|++|+||||+..|
T Consensus 98 ---------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~D 130 (147)
T TIGR01656 98 ---------------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRD 130 (147)
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHH
Confidence 123999999 999999999999999999999999
Q ss_pred HHHHHHcCCcEEEECCC
Q 018946 307 VAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~ 323 (348)
+++|+++||.+|++.++
T Consensus 131 i~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 131 LQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHCCCCEEEecCC
Confidence 99999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=143.40 Aligned_cols=178 Identities=16% Similarity=0.206 Sum_probs=106.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHH---HHHH-hhHHHHHHHHHhcC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM---LVLF-FNRKNALDEFLASK 158 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~ 158 (348)
+.++|+|||||||++.+.. . .++++++.. .| +++...++.....-.+.+ .... ....+.+.+++...
T Consensus 2 ~~~~vifDfDgTi~~~d~~-~-----~~~~~~~~~--~~-~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 72 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNI-I-----AIMKKFAPP--EW-EELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLET 72 (219)
T ss_pred CCcEEEEcCCCCCCcchhh-H-----HHHHHhCHH--HH-HHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhC
Confidence 3459999999999998864 2 244444432 22 222222222111111111 1111 11124444544433
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
.+++||+.++|+.|+++|++++|+||+ ....++.+++++ +.. + .+++++ ..+.|+.+.
T Consensus 73 -~~l~pG~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~-~~~--~-~i~~n~--------~~~~~~~~~------ 130 (219)
T PRK09552 73 -AEIREGFHEFVQFVKENNIPFYVVSGG---MDFFVYPLLQGL-IPK--E-QIYCNG--------SDFSGEYIT------ 130 (219)
T ss_pred -CCcCcCHHHHHHHHHHcCCeEEEECCC---cHHHHHHHHHHh-CCc--C-cEEEeE--------EEecCCeeE------
Confidence 689999999999999999999999996 578899999987 643 1 111111 111222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCC-CCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~-~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
..||+|.... +...... ...++++++..+.+|+||||+.+|+.+|+++|+.+
T Consensus 131 ----------------------~~kp~p~~~~~~~~~~~~-----K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 131 ----------------------ITWPHPCDEHCQNHCGCC-----KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred ----------------------EeccCCccccccccCCCc-----hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 1288877510 0000000 23567888999999999999999999999999954
Q ss_pred E
Q 018946 318 V 318 (348)
Q Consensus 318 i 318 (348)
+
T Consensus 184 a 184 (219)
T PRK09552 184 A 184 (219)
T ss_pred e
Confidence 4
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=134.47 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=81.7
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCC-----chHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~-----~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
.++||+.++|+.|+++|++++|+||+.... ...+..+++++|+..++. +++. .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~--~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL--YACP--H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE--EECC--C------------------
Confidence 478999999999999999999999952000 466888899999863322 1111 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc-CCCCCcEEEEec-CHhhHHHHHHc
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQRI 313 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l-gv~p~~~i~VGD-s~~Di~aA~~a 313 (348)
..||+|++ |+.+++++ +++|++|+|||| +..|+.+|+++
T Consensus 83 -------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 83 -------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred -------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHHHC
Confidence 12999999 99999999 599999999999 79999999999
Q ss_pred CCcEEEEC
Q 018946 314 GMPCVVMR 321 (348)
Q Consensus 314 G~~~i~v~ 321 (348)
|+.+|+++
T Consensus 124 Gi~~i~~~ 131 (132)
T TIGR01662 124 GLAFILVA 131 (132)
T ss_pred CCeEEEee
Confidence 99999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-17 Score=147.71 Aligned_cols=108 Identities=12% Similarity=0.018 Sum_probs=89.1
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc---------ccchheeecchhhhhhhcccccccc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~---------~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
..+++||+.++|+.|+++|++++|+||. .....++.+++.+|+. ++|+.++.+.+ ..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~--~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~-~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWN--DVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYK-PN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCC--CChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccC-Cc-----------
Confidence 4678999999999999999999999984 1568889999999998 88877654321 10
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc--CCCCCcEEEEecCHhhH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l--gv~p~~~i~VGDs~~Di 307 (348)
..||.+++ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 -------------------------------~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 -------------------------------KAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred -------------------------------hHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 01666666 77777777 89999999999999999
Q ss_pred HHHHHcCCcEEEECCCCC
Q 018946 308 AGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~ 325 (348)
.+|+++|+.++++.++..
T Consensus 144 ~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 144 REVWGYGVTSCYCPSGMD 161 (174)
T ss_pred HHHHHhCCEEEEcCCCcc
Confidence 999999999999987653
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=141.87 Aligned_cols=159 Identities=9% Similarity=0.111 Sum_probs=107.1
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCCCCC
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRP 164 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 164 (348)
-+|+||+||||+|+... . .+|.+. ++...+..+.+. ... ..|.+.. .....+.+
T Consensus 64 ~aViFDlDgTLlDSs~~-~---------~~G~~~--~s~~~~~~l~g~------~~w-------~~~~~~~-~~~s~p~~ 117 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPG-F---------WRGKKT--FSPGSEDYLKNQ------VFW-------EKVNNGW-DEFSIPKE 117 (237)
T ss_pred eEEEEeCCCccccCcHH-H---------hCCccc--CCHHHhhhhcCh------HHH-------HHHHHhc-ccCCcchh
Confidence 39999999999999874 2 267763 444433333221 111 2233322 22345677
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCCC-CchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHH
Q 018946 165 GVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (348)
Q Consensus 165 Gv~elL~~Lk~~Gi~vaIvTn~~~~-~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~ 243 (348)
++.++|+.++++|++++++||...+ .+..+..+++.+|+.++|+.+ ++++....
T Consensus 118 ~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~d~~~~------------------------ 172 (237)
T TIGR01672 118 VARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAGDKPGQ------------------------ 172 (237)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECCCCCCC------------------------
Confidence 7999999999999999999996321 456888899999999888654 33222110
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 244 ~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
.||++ . .+++++++ ++||||+.+|+.+|+++|+.+|.|.++
T Consensus 173 ------------------~Kp~~----------------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 173 ------------------YQYTK----------------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred ------------------CCCCH----------------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 04432 2 23456665 799999999999999999999999887
Q ss_pred CCCcc-ccccc
Q 018946 324 CITTL-PVSKT 333 (348)
Q Consensus 324 ~~~~~-~l~~~ 333 (348)
.++.- .++..
T Consensus 214 ~~s~~~~~~~~ 224 (237)
T TIGR01672 214 SNSTYKPLPQA 224 (237)
T ss_pred CCCCCCCcccc
Confidence 76543 45443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=136.70 Aligned_cols=162 Identities=17% Similarity=0.156 Sum_probs=103.2
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCC----CHHHHHHHHhcccCcHHHHHHHH--hhHHHHHHHHHhc
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW----TAPIYTDLLRKSAGDEDRMLVLF--FNRKNALDEFLAS 157 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~----~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 157 (348)
+++|+|||||||++ ..|..+++++|++. .+ ....+...++. ++.... ....+.+...+.
T Consensus 1 ~~~v~FD~DGTL~~-------~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~i~~~~~- 65 (205)
T PRK13582 1 MEIVCLDLEGVLVP-------EIWIAFAEKTGIPE-LRATTRDIPDYDVLMKQ------RLDILDEHGLGLADIQEVIA- 65 (205)
T ss_pred CeEEEEeCCCCChh-------hHHHHHHHHcCChH-HHHHhcCCCCHHHHHHH------HHHHHHHcCCCHHHHHHHHH-
Confidence 46899999999993 35667777888752 00 00112222221 111111 001233444443
Q ss_pred CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchh
Q 018946 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..+++||+.++|+.|+++ ++++|+||+ ....++.+++++|+..+|...+...++. ++.|..
T Consensus 66 -~~~~~pg~~e~L~~L~~~-~~~~IvS~~---~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~------- 126 (205)
T PRK13582 66 -TLDPLPGAVEFLDWLRER-FQVVILSDT---FYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD------- 126 (205)
T ss_pred -hCCCCCCHHHHHHHHHhc-CCEEEEeCC---cHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc-------
Confidence 367899999999999999 999999995 6789999999999998886543322111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
+|.|+. ...++++++..+++|+||||+.+|+.+++.+|+.+
T Consensus 127 -------------------------~~~p~~--------------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 127 -------------------------LRQPDG--------------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred -------------------------ccccch--------------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 122222 23444556666789999999999999999999965
Q ss_pred E
Q 018946 318 V 318 (348)
Q Consensus 318 i 318 (348)
.
T Consensus 168 ~ 168 (205)
T PRK13582 168 L 168 (205)
T ss_pred E
Confidence 4
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.2e-16 Score=139.24 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-----CchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCC
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-----~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~ 234 (348)
..++||+.++|+.|+++|++++|+||...- ........++.+|++.++.......++ +.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--------------~~-- 90 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDG--------------CE-- 90 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCC--------------CC--
Confidence 357999999999999999999999995210 001133346677776654322111111 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 235 ~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
.+||+|++ |+.++++++++|++|+||||+..|+.+|+++|
T Consensus 91 --------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aG 130 (173)
T PRK06769 91 --------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVN 130 (173)
T ss_pred --------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCC
Confidence 23999999 99999999999999999999999999999999
Q ss_pred CcEEEECCCCCC
Q 018946 315 MPCVVMRSRCIT 326 (348)
Q Consensus 315 ~~~i~v~~~~~~ 326 (348)
|.+|++.++...
T Consensus 131 i~~i~v~~g~~~ 142 (173)
T PRK06769 131 ATTILVRTGAGY 142 (173)
T ss_pred CeEEEEecCCCc
Confidence 999999987644
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.8e-14 Score=127.33 Aligned_cols=176 Identities=18% Similarity=0.150 Sum_probs=101.7
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHH-HHhhH----HHHHHHHHhcCCC
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFFNR----KNALDEFLASKDA 160 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~ 160 (348)
+||||+||||++.+.. ..+++.++.+ .| ...+................ ..... ...+.+++.. .
T Consensus 3 ~iiFD~dgTL~~~~~~------~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 71 (188)
T TIGR01489 3 VVVSDFDGTITLNDSD------DWITDKFGPP--EA-NRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKS--A 71 (188)
T ss_pred EEEEeCCCcccCCCch------HHHHHhcCcc--hh-hHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHh--C
Confidence 7999999999998764 2344444432 22 22222222211111110000 00000 2234444433 6
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++ +++....+ .++..+..-
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~i~-~~~~~~~~--~g~~~~~~~--------- 136 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDG---NDFFIDPVLEGIGEKDVFIEIY-SNPASFDN--DGRHIVWPH--------- 136 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHHcCChhheeEEe-ccCceECC--CCcEEEecC---------
Confidence 89999999999999999999999996 5688899999999999998654 43322110 011111000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCc--hhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPE--SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~--~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
+ .... .+.+. .++++ ++.+.+.. +++++||||+.+|+.+|+++++.+
T Consensus 137 ----------------------~-~~~~-~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 137 ----------------------H-CHGC-CSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ----------------------C-CCcc-CcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0 0000 00011 12223 55554544 899999999999999999997644
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.5e-15 Score=131.91 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=78.2
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCC---------chHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~---------~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. +.++.+. +..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~-~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATH-AGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecC-CCC--------------
Confidence 68999999999999999999999963100 024678899999853 2222222 110
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC--CCCCcEEEEecCH------
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 304 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg--v~p~~~i~VGDs~------ 304 (348)
.+||+|++ |+.+++++| +++++|+||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 13999999 999999999 9999999999986
Q ss_pred --hhHHHHHHcCCcEEE
Q 018946 305 --SGVAGAQRIGMPCVV 319 (348)
Q Consensus 305 --~Di~aA~~aG~~~i~ 319 (348)
.|+++|+++|+++++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999865
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.1e-14 Score=129.24 Aligned_cols=180 Identities=17% Similarity=0.216 Sum_probs=121.1
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH--HHHH-----HHHhhHHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE--DRML-----VLFFNRKNALDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~--~~~~-----~~~~~~~~~~~~~ 154 (348)
+..++++|||||||++. ..|..+....|.. ............+.. .... ...........+.
T Consensus 3 ~~~~L~vFD~D~TLi~~------~~~~~~~~~~g~~-----~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 3 RMKKLAVFDLDGTLINA------ELIDELARGAGVG-----EEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CccceEEEecccchhhH------HHHHHHHHHhCCH-----HHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 35679999999999992 4556666666653 111111111111111 1111 0001113444444
Q ss_pred HhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCC
Q 018946 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (348)
Q Consensus 155 ~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~ 234 (348)
..+- .++.||+.++++.++++|++++|+|++ +...++.+.+.+|++..+...+...+ + .+++-+.|..+..
T Consensus 72 ~~~~-~~l~~ga~elv~~lk~~G~~v~iiSgg---~~~lv~~ia~~lg~d~~~an~l~~~d-G---~ltG~v~g~~~~~- 142 (212)
T COG0560 72 REEF-LRLTPGAEELVAALKAAGAKVVIISGG---FTFLVEPIAERLGIDYVVANELEIDD-G---KLTGRVVGPICDG- 142 (212)
T ss_pred HHhc-CcCCccHHHHHHHHHHCCCEEEEEcCC---hHHHHHHHHHHhCCchheeeEEEEeC-C---EEeceeeeeecCc-
Confidence 4332 688999999999999999999999995 88999999999999998877654433 1 3445444443321
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 235 ~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
+....+++..++.+|+++++++++|||.||+.+...+|
T Consensus 143 ------------------------------------------~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag 180 (212)
T COG0560 143 ------------------------------------------EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAG 180 (212)
T ss_pred ------------------------------------------chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCC
Confidence 11112288899999999999999999999999999999
Q ss_pred CcEEEECCC
Q 018946 315 MPCVVMRSR 323 (348)
Q Consensus 315 ~~~i~v~~~ 323 (348)
.+.++-+.+
T Consensus 181 ~~ia~n~~~ 189 (212)
T COG0560 181 LPIAVNPKP 189 (212)
T ss_pred CCeEeCcCH
Confidence 998877653
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=131.02 Aligned_cols=176 Identities=17% Similarity=0.215 Sum_probs=102.3
Q ss_pred EEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH----hhHHHHHHHHHhcCCCCC
Q 018946 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF----FNRKNALDEFLASKDAPL 162 (348)
Q Consensus 87 viFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l 162 (348)
|+||+||||++.+.. ..+++.++.+ .| .+....++.....-.+.+...+ ....+...+++.. ..++
T Consensus 2 ~~fDFDgTit~~d~~------~~~~~~~~~~--~~-~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~l 71 (214)
T TIGR03333 2 IICDFDGTITNNDNI------ISIMKQFAPP--EW-EALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE-TAEI 71 (214)
T ss_pred EEeccCCCCCcchhH------HHHHHHhCcH--HH-HHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHh-cCcc
Confidence 799999999987754 2333333322 12 2222222221111122221110 0112355555443 3689
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
+||+.++|+.|+++|++++|+|++ ....++.+++.++....+ ++++. .+.+..+.
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~~~~~~i----~~n~~--------~~~~~~~~---------- 126 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGG---MDFFVYPLLEGIVEKDRI----YCNEA--------DFSNEYIH---------- 126 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHhhCCcccE----Eecee--------EeeCCeeE----------
Confidence 999999999999999999999995 678888899887543222 11110 11111111
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
..||+|..+.. ......| ..++++++..+++|+||||+.+|+.+|+.+|+ +..+
T Consensus 127 ------------------~~~p~~~~~~~~~~cg~~K-----~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar 181 (214)
T TIGR03333 127 ------------------IDWPHPCDGTCQNQCGCCK-----PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFAR 181 (214)
T ss_pred ------------------EeCCCCCccccccCCCCCH-----HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEeh
Confidence 12788777321 0111111 24456666788999999999999999999999 4444
Q ss_pred C
Q 018946 322 S 322 (348)
Q Consensus 322 ~ 322 (348)
+
T Consensus 182 ~ 182 (214)
T TIGR03333 182 D 182 (214)
T ss_pred H
Confidence 3
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=118.46 Aligned_cols=118 Identities=19% Similarity=0.153 Sum_probs=89.2
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+++.++.......... ......
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~------ 87 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNK---SRREVLELLEELGLDDYFDPVITSNGAAIYYP-----KEGLFL------ 87 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCc---hHHHHHHHHHHcCCchhhhheeccchhhhhcc-----cccccc------
Confidence 4678999999999999999999999995 57889999999999877776543332211100 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
-......+||.+.. +..+++.++..++++++|||+.+|+.+++++|+.++
T Consensus 88 ----------------~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 88 ----------------GGGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred ----------------cccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 00111234888888 999999999999999999999999999999999998
Q ss_pred EE
Q 018946 319 VM 320 (348)
Q Consensus 319 ~v 320 (348)
+|
T Consensus 138 ~v 139 (139)
T cd01427 138 AV 139 (139)
T ss_pred eC
Confidence 75
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-14 Score=128.01 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC------------CchHHHHHHHHcCCcccchheeec----chhhhhhhcc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 223 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~------------~~~~~~~il~~lgl~~~f~~~i~~----~~e~~~~~~~ 223 (348)
+.++||+.++|+.|+++|++++|+||...- ....+..+++.+|+. |+.++++ .++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCC------
Confidence 468999999999999999999999994200 134677788999996 6544443 1211
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC
Q 018946 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (348)
Q Consensus 224 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs 303 (348)
..+||+|++ |+.++++++++|++|+||||+
T Consensus 100 ------------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 100 ------------------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 124999999 999999999999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCC
Q 018946 304 QSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 304 ~~Di~aA~~aG~~~i~v~~~~ 324 (348)
.+|+.+|+++||++|++.++.
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999998643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.1e-14 Score=126.10 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=83.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.++++|++++|+|++ +...++.+++.+|++++|...+...++ +.+ +|
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s---~~~~v~~~~~~lg~~~~~~~~l~~~~~---g~~----~g----------- 144 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSAS---LTILVKPLARILGIDNAIGTRLEESED---GIY----TG----------- 144 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHcCCcceEecceEEcCC---CEE----eC-----------
Confidence 358999999999999999999999995 789999999999998877653322111 011 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
|+.... ...+.+ +.+++..+++.++++++|++||||.+|+.+++.+|.++++
T Consensus 145 -----------------------~~~~~~--~~g~~K---~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 145 -----------------------NIDGNN--CKGEGK---VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred -----------------------CccCCC--CCChHH---HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 111000 001111 1227788889999999999999999999999999999877
Q ss_pred ECC
Q 018946 320 MRS 322 (348)
Q Consensus 320 v~~ 322 (348)
.++
T Consensus 197 ~~~ 199 (202)
T TIGR01490 197 NPD 199 (202)
T ss_pred CCC
Confidence 654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-14 Score=138.25 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=60.7
Q ss_pred cCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCccccccc------c
Q 018946 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKT------Q 334 (348)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~------~ 334 (348)
+||+|.+ |+.+++++|++|++|+||||+. .||.+|+++||++|+|.++....+++... .
T Consensus 201 gKP~p~~--------------~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~ 266 (279)
T TIGR01452 201 GKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHD 266 (279)
T ss_pred CCCCHHH--------------HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccC
Confidence 4999999 9999999999999999999995 99999999999999999998876665531 2
Q ss_pred cchhHHHHhhccc
Q 018946 335 RLADMLCRILKSI 347 (348)
Q Consensus 335 ~~~d~l~~~l~~i 347 (348)
..+|++++.+.++
T Consensus 267 ~~Pd~~~~~l~~l 279 (279)
T TIGR01452 267 LVPDYVVESLADL 279 (279)
T ss_pred CCCCEEecccccC
Confidence 2477777776654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=121.39 Aligned_cols=111 Identities=20% Similarity=0.289 Sum_probs=77.4
Q ss_pred HHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 154 ~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
++.. .++++||+.++++.++++|++++|+|++ ....++.+++.+|+..++...+...+++ .+.|...
T Consensus 67 ~~~~-~~~~~~g~~~~l~~l~~~g~~~~ivS~~---~~~~i~~~~~~~g~~~~~~~~~~~~~~g-------~~~g~~~-- 133 (177)
T TIGR01488 67 FLAR-QVALRPGARELISWLKERGIDTVIVSGG---FDFFVEPVAEKLGIDDVFANRLEFDDNG-------LLTGPIE-- 133 (177)
T ss_pred HHHh-cCCcCcCHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHcCCchheeeeEEECCCC-------EEeCccC--
Confidence 4433 3678999999999999999999999995 6789999999999987776554322111 1111100
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
+ ||.+ ..+.+... ++..++.++++++++++|||+.+|+.+++.+
T Consensus 134 ~----------------------------~~~~-----~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 134 G----------------------------QVNP-----EGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred C----------------------------cccC-----CcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0 1110 11222222 6677788899999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-13 Score=123.72 Aligned_cols=185 Identities=16% Similarity=0.160 Sum_probs=123.6
Q ss_pred CCCCceEEEEecCCccccccccC---hHHHHHHHH-HHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH----HHHH
Q 018946 80 NPPRDLAVLLEVDGVLVDAYRFG---NRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----KNAL 151 (348)
Q Consensus 80 ~~~~~kaviFDvDGTL~d~~~~~---~~~a~~~~~-~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~ 151 (348)
+.+.+++++||+|.||.....-. .++.+.+.| .++|++...- +.....+.... ...|..+.... ...|
T Consensus 11 ~~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a-~~L~~~~yk~Y---G~t~aGL~~~~~~~d~deY 86 (244)
T KOG3109|consen 11 SGPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEA-EELRESLYKEY---GLTMAGLKAVGYIFDADEY 86 (244)
T ss_pred CCccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhh-HHHHHHHHHHH---hHHHHHHHHhcccCCHHHH
Confidence 34478899999999999854321 223334554 4578863111 11111111111 11111111100 3455
Q ss_pred HHHHhc----CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 152 DEFLAS----KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 152 ~~~~~~----~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
.+++.. ..+.+-|-.+++|-.|++++ ..+.||+ ...-+.++++++|++++|+.+++..- . . +
T Consensus 87 ~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa---~k~HA~r~Lk~LGieDcFegii~~e~-~-n-------p 152 (244)
T KOG3109|consen 87 HRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNA---YKVHAIRILKKLGIEDCFEGIICFET-L-N-------P 152 (244)
T ss_pred HHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCC---cHHHHHHHHHHhChHHhccceeEeec-c-C-------C
Confidence 555542 23667888999999999975 8999997 56889999999999999998754321 0 0 0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcEEEEecCHhh
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSG 306 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~i~VGDs~~D 306 (348)
-+... +-||++.. |+.+.+..|++ |.+++||+||..+
T Consensus 153 ~~~~~----------------------------vcKP~~~a--------------fE~a~k~agi~~p~~t~FfDDS~~N 190 (244)
T KOG3109|consen 153 IEKTV----------------------------VCKPSEEA--------------FEKAMKVAGIDSPRNTYFFDDSERN 190 (244)
T ss_pred CCCce----------------------------eecCCHHH--------------HHHHHHHhCCCCcCceEEEcCchhh
Confidence 00111 12999999 99999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEECCCC
Q 018946 307 VAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~~ 324 (348)
|++|++.||.++++....
T Consensus 191 I~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 191 IQTAKEVGLKTVLVGREH 208 (244)
T ss_pred HHHHHhccceeEEEEeee
Confidence 999999999999987544
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=123.15 Aligned_cols=168 Identities=15% Similarity=0.093 Sum_probs=104.8
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhccc---CcHHHHHHHH--hhHHHHHHHHHhcCC
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---GDEDRMLVLF--FNRKNALDEFLASKD 159 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~ 159 (348)
..++|||||||++. .|.+.....|+.. .... ..+... ....++..+. ......+++++. .
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~----~~~~--~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~--~ 66 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA----LKAT--TRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA--T 66 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH----HHHH--hcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH--h
Confidence 46899999999964 4778888888641 1110 000000 0001111111 111345566654 3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
++++||+.++|+.+++.| +++|+|++ +...+..+++.+|++.+|...+...+. +.++|.....
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~---~~~~~~~il~~lgi~~~~an~l~~~~~-------g~~tG~~~~~------ 129 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDT---FYEFSQPLMRQLGFPTLLCHKLEIDDS-------DRVVGYQLRQ------ 129 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCC---hHHHHHHHHHHcCCchhhceeeEEecC-------CeeECeeecC------
Confidence 578999999999999985 99999995 789999999999999887654322110 1122221110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
||.+. .+ ++.. ++.+ .+|++|||+.+|+.++..+|+++++
T Consensus 130 -----------------------~~~K~----------~~---l~~l-~~~~---~~~v~vGDs~nDl~ml~~Ag~~ia~ 169 (203)
T TIGR02137 130 -----------------------KDPKR----------QS---VIAF-KSLY---YRVIAAGDSYNDTTMLSEAHAGILF 169 (203)
T ss_pred -----------------------cchHH----------HH---HHHH-HhhC---CCEEEEeCCHHHHHHHHhCCCCEEe
Confidence 11111 11 2322 4455 3899999999999999999999988
Q ss_pred ECCCC
Q 018946 320 MRSRC 324 (348)
Q Consensus 320 v~~~~ 324 (348)
...+.
T Consensus 170 ~ak~~ 174 (203)
T TIGR02137 170 HAPEN 174 (203)
T ss_pred cCCHH
Confidence 77643
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.1e-14 Score=123.10 Aligned_cols=105 Identities=14% Similarity=0.220 Sum_probs=87.0
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|+++|++++|+||.. ....+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~--~~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNA--GEQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCc--hHHHHHHHHHHcCCEEEcC------------------------------
Confidence 35789999999999999999999999952 1455666667777643210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
..||+|++ |..+++++|+++++|+||||+. .|+.+|+++||.+
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 01999999 9999999999999999999998 7999999999999
Q ss_pred EEECCCCCCccccc
Q 018946 318 VVMRSRCITTLPVS 331 (348)
Q Consensus 318 i~v~~~~~~~~~l~ 331 (348)
|+|.++....+.+.
T Consensus 133 i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 133 ILVEPLVHPDQWFI 146 (170)
T ss_pred EEEccCcCCccccc
Confidence 99998887766554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-14 Score=127.38 Aligned_cols=88 Identities=18% Similarity=0.271 Sum_probs=76.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc--cchheeecchhhhhhhcccccccccccCCchh
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~--~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
.+++||+.++|+.|+++|++++++|+ .....+..+.+.+|+.+ .|....
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc--------------------------
Confidence 46799999999999999999999998 46899999999999954 222110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
.||++.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 ------------------------~kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ------------------------GKPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------------------------TTTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------------------------ccccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 1788887 99999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.8e-14 Score=132.84 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=78.4
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
++++.+.+..|++.|++++++||..+ .........+|+..+|+.+..+.. ++.+.
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~---~~~~~~~~~~g~g~~~~~i~~~~~------------~~~~~---------- 176 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGR---YYKRKDGLALDVGPFVTALEYATD------------TKATV---------- 176 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCC---CCcCCCCCCCCchHHHHHHHHHhC------------CCcee----------
Confidence 56788889999888899999998532 222333345566666553311000 00001
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEC
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~ 321 (348)
.+||+|++ |+.+++++|++|++|+||||+. +||.+|+++||.+|+|.
T Consensus 177 ------------------~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 224 (257)
T TIGR01458 177 ------------------VGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVR 224 (257)
T ss_pred ------------------ecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 23999999 9999999999999999999996 89999999999999999
Q ss_pred CCCCC
Q 018946 322 SRCIT 326 (348)
Q Consensus 322 ~~~~~ 326 (348)
++...
T Consensus 225 ~G~~~ 229 (257)
T TIGR01458 225 TGKYR 229 (257)
T ss_pred CCCCC
Confidence 87643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-13 Score=129.84 Aligned_cols=111 Identities=14% Similarity=0.018 Sum_probs=89.4
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++||+.++|+.|+++|++++++||. .....+..++.+++.. +|+.++ +.+..... ... .
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r---~~~~~~~~l~~l~~~~~~f~~i~-~~~~~~~~-----~~~--~------- 247 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGR---DGVCEEDTVEWLRQTDIWFDDLI-GRPPDMHF-----QRE--Q------- 247 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCC---ChhhHHHHHHHHHHcCCchhhhh-CCcchhhh-----ccc--C-------
Confidence 468999999999999999999999995 6788899999999986 887653 22211100 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv-~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
..+||+|++ ++.++++++. ++++|+||||+..|+.+|+++||.+
T Consensus 248 ---------------------~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 ---------------------GDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ---------------------CCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 023999999 9999999988 6799999999999999999999999
Q ss_pred EEECCC
Q 018946 318 VVMRSR 323 (348)
Q Consensus 318 i~v~~~ 323 (348)
|+|.++
T Consensus 293 i~v~~g 298 (300)
T PHA02530 293 WQVAPG 298 (300)
T ss_pred EEecCC
Confidence 999764
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=119.17 Aligned_cols=180 Identities=11% Similarity=0.007 Sum_probs=111.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHH-HHcCCCCCCCCHHHHHHHHhcccCcHHHH--------HHHHh-h--H---
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM--------LVLFF-N--R--- 147 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~-~~~gl~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~-~--~--- 147 (348)
..++++||+||||++... ...|..++ .++|+.. ........+++......... .+..+ + .
T Consensus 5 ~~k~~iFD~DGTL~~~d~---~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDM---FGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred cceEEEEecCCCCcccch---HHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 356999999999996553 47888877 7888652 22233333333322111110 11000 1 1
Q ss_pred ---HHHHHHHHhcCCCCCCCcHHHHH-HHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecch-hhhhhhc
Q 018946 148 ---KNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLY 222 (348)
Q Consensus 148 ---~~~~~~~~~~~~~~l~pGv~elL-~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~-e~~~~~~ 222 (348)
.+.|.+.+... ..++||+.++| +.+++.|++++|+||+ ++..++.+++.+|+.... .+ ++.+ ++ .+
T Consensus 80 ~~~~~~f~~~~~~~-~~~~pga~e~L~~~l~~~G~~l~IvSas---~~~~~~~il~~l~~~~~~-~~-i~t~l~~---~~ 150 (211)
T PRK11590 80 QALEADFVRWFRDN-VTAFPVVQERLTTYLLSSDADVWLITGS---PQPLVEQVYFDTPWLPRV-NL-IASQMQR---RY 150 (211)
T ss_pred HHHHHHHHHHHHHh-CcCCccHHHHHHHHHHhCCCEEEEEeCC---cHHHHHHHHHHccccccC-ce-EEEEEEE---EE
Confidence 12233333322 56799999999 5788899999999994 789999999999963311 22 2332 22 24
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 223 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
++.+.|.. ..-+.. .+.+.++++.+...+.+.||
T Consensus 151 tg~~~g~~-------------------------------------------c~g~~K---~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 151 GGWVLTLR-------------------------------------------CLGHEK---VAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred ccEECCcc-------------------------------------------CCChHH---HHHHHHHhCCCcceEEEecC
Confidence 44443332 111112 23444666777888999999
Q ss_pred CHhhHHHHHHcCCcEEEECC
Q 018946 303 SQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 303 s~~Di~aA~~aG~~~i~v~~ 322 (348)
|.+|+.+...+|-+.++.++
T Consensus 185 s~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CcccHHHHHhCCCCEEECcc
Confidence 99999999999999887765
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=115.18 Aligned_cols=89 Identities=8% Similarity=-0.000 Sum_probs=73.0
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcC-------CcccchheeecchhhhhhhcccccccccccC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lg-------l~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
+++||+.++|+.|+++|++++|+||. +....+..+++.++ +.++|+.++.+ .
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~--~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~---------------~---- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYN--DDPHVAYELLKIFEDFGIIFPLAEYFDPLTIG---------------Y---- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCC--CCHHHHHHHHHhccccccchhhHhhhhhhhhc---------------C----
Confidence 57899999999999999999999995 25678888888888 56666544221 1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHH
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg--v~p~~~i~VGDs~~Di~aA~ 311 (348)
.||+|++ |..+++++| +.|++|+||||+..|+....
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 1677777 999999999 99999999999999988765
Q ss_pred H
Q 018946 312 R 312 (348)
Q Consensus 312 ~ 312 (348)
+
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.3e-13 Score=123.49 Aligned_cols=107 Identities=8% Similarity=0.201 Sum_probs=78.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-CchHHHHHHHHcCC--cccchheeecchhhhhhhcccccccccccCCch
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-~~~~~~~il~~lgl--~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
..+.||+.++|+.|+++|++++++||...+ .+..+..+++.+|+ .++|..++ +++.. .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil-~gd~~----------------~-- 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIF-AGDKP----------------G-- 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEE-cCCCC----------------C--
Confidence 567899999999999999999999996321 35577777878999 78876543 22110 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
||++.- +++.+++ ++||||+.+|+.+|++||+.
T Consensus 174 --------------------------K~~K~~-----------------~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 --------------------------QYTKTQ-----------------WLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------------------------CCCHHH-----------------HHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 333221 2345665 89999999999999999999
Q ss_pred EEEECCCCCCcc-cccc
Q 018946 317 CVVMRSRCITTL-PVSK 332 (348)
Q Consensus 317 ~i~v~~~~~~~~-~l~~ 332 (348)
+|.|.++.+..- .++.
T Consensus 207 ~I~v~~G~~~~~~~~~~ 223 (237)
T PRK11009 207 GIRILRAANSTYKPLPQ 223 (237)
T ss_pred EEEEecCCCCCCCcccc
Confidence 999998877433 4444
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.6e-13 Score=132.19 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=82.9
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCC----CC--------CchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYG----KS--------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~----~~--------~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
..++||+.++|+.|+++|++++|+||.. .. ....+..+++.+|+. |+.++++... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~----------~ 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHF----------P 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCc----------C
Confidence 5789999999999999999999999931 00 123455667777773 4444332110 0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.+. ...+||+|++ +..+++.++++|++++||||+.+|+
T Consensus 97 sd~----------------------------~~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDN----------------------------CSCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred ccc----------------------------CCCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 000 1134999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECC
Q 018946 308 AGAQRIGMPCVVMRS 322 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~ 322 (348)
.+|+++||++|+++.
T Consensus 135 ~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 135 QLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHCCCeEEEEEC
Confidence 999999999999953
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=123.16 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=61.0
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
.+||+|++ |+.+++++++++++|+||||+. .||.+|+++|+.+++|.++....+++......+|+
T Consensus 172 ~gKP~~~~--------------~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~ 237 (248)
T PRK10444 172 VGKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSW 237 (248)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCE
Confidence 46999999 9999999999999999999996 89999999999999999998887766543334666
Q ss_pred HHHhhccc
Q 018946 340 LCRILKSI 347 (348)
Q Consensus 340 l~~~l~~i 347 (348)
+++++.++
T Consensus 238 ~~~sl~el 245 (248)
T PRK10444 238 IYPSVADI 245 (248)
T ss_pred EECCHHHh
Confidence 66655543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-13 Score=121.53 Aligned_cols=85 Identities=15% Similarity=0.082 Sum_probs=75.5
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
.+..|+++|++++|+||. ....++..++.+|+.++|+..
T Consensus 42 ~~~~L~~~Gi~laIiT~k---~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 80 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSK---KSGAVRHRAEELKIKRFHEGI-------------------------------------- 80 (169)
T ss_pred HHHHHHHCCCEEEEEECC---CcHHHHHHHHHCCCcEEEecC--------------------------------------
Confidence 567888999999999995 679999999999999887632
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
||+|++ ++.+++++++++++|++|||+.+|+.+++.+|+..++-+.
T Consensus 81 --------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA 126 (169)
T TIGR02726 81 --------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDA 126 (169)
T ss_pred --------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCc
Confidence 777788 9999999999999999999999999999999999776653
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-11 Score=116.51 Aligned_cols=72 Identities=8% Similarity=0.109 Sum_probs=59.3
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
.+||+|++ |+.+++++++++++++||||+. .||.+|+++||++|+|.++....+++......+|+
T Consensus 176 ~gKP~~~~--------------~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~ 241 (249)
T TIGR01457 176 IGKPNAII--------------MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTH 241 (249)
T ss_pred cCCChHHH--------------HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCE
Confidence 56888888 9999999999999999999997 79999999999999999988766555443334666
Q ss_pred HHHhhcc
Q 018946 340 LCRILKS 346 (348)
Q Consensus 340 l~~~l~~ 346 (348)
+++.+.+
T Consensus 242 ~v~~l~~ 248 (249)
T TIGR01457 242 VVSSLAE 248 (249)
T ss_pred EeCChhh
Confidence 6666554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.2e-13 Score=102.04 Aligned_cols=72 Identities=15% Similarity=0.238 Sum_probs=62.7
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
++||+|.+ |+.+++++++++++|+||||+ ..||.+|+++||.+|+|.++....+.+......+|+
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~ 67 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDY 67 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSE
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCE
Confidence 46999999 999999999999999999999 899999999999999999998887776544445777
Q ss_pred HHHhhcc
Q 018946 340 LCRILKS 346 (348)
Q Consensus 340 l~~~l~~ 346 (348)
+++.|.+
T Consensus 68 vv~~l~e 74 (75)
T PF13242_consen 68 VVDDLKE 74 (75)
T ss_dssp EESSGGG
T ss_pred EECCHHh
Confidence 7776665
|
... |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.7e-11 Score=113.06 Aligned_cols=174 Identities=16% Similarity=0.206 Sum_probs=111.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecchhhhhhh-----------------
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSL----------------- 221 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~e~~~~~----------------- 221 (348)
..+.||+.++|+.|+++|+++.++||.++.........++. ++++-..+.++.++......+
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l 102 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGL 102 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcch
Confidence 46799999999999999999999999886666656666666 565433333333222111110
Q ss_pred ------cccccc--ccc-----ccCCchhHHHHHH-HHHHH---HH---------------------HHHHHHHHH----
Q 018946 222 ------YGQFVL--GKG-----ISSGVDEQLATEA-RKAVS---AQ---------------------KQEIAEEVA---- 259 (348)
Q Consensus 222 ------~~~~v~--g~~-----v~~~~~~~~~~~~-~k~~~---~~---------------------~~~i~~~~~---- 259 (348)
.+..+. .+. |.-|.++.+.-|. .++.. +. -+.|+.-+.
T Consensus 103 ~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg 182 (269)
T COG0647 103 KEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATG 182 (269)
T ss_pred HHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhC
Confidence 110111 111 3334444333222 11100 00 001111110
Q ss_pred ----hhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccc
Q 018946 260 ----SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQ 334 (348)
Q Consensus 260 ----~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~ 334 (348)
-.+||++.| |+.+++.++.++++++||||+. +||.+|.++||.+++|.++....+++....
T Consensus 183 ~~~~~~GKP~~~i--------------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~ 248 (269)
T COG0647 183 REPTVIGKPSPAI--------------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAE 248 (269)
T ss_pred CcccccCCCCHHH--------------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhc
Confidence 168999999 9999999999999999999996 699999999999999999998877776555
Q ss_pred cchhHHHHhhccc
Q 018946 335 RLADMLCRILKSI 347 (348)
Q Consensus 335 ~~~d~l~~~l~~i 347 (348)
..++++++++.++
T Consensus 249 ~~p~~v~~sl~~~ 261 (269)
T COG0647 249 VKPTYVVDSLAEL 261 (269)
T ss_pred cCCcchHhhHHHH
Confidence 5577777766553
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.9e-11 Score=111.27 Aligned_cols=121 Identities=25% Similarity=0.290 Sum_probs=86.9
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
.+.+.+++.+..++++||+.+|++.|+++|++++|+|+| ....++.+++.+|+.+.+. .++++.-. +.
T Consensus 108 ~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G---~~~~Ie~vL~~lgl~~~~~-~IvSN~L~--------f~ 175 (277)
T TIGR01544 108 KAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAG---IGNVLEEVLRQAGVYHPNV-KVVSNFMD--------FD 175 (277)
T ss_pred HHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHHcCCCCcCc-eEEeeeEE--------EC
Confidence 456667766556899999999999999999999999997 6799999999999865443 33333211 11
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC--CCCCcEEEEecCHh
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQS 305 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg--v~p~~~i~VGDs~~ 305 (348)
.+++..| ||.|-+.+ -.+...+ ++.++++++ .++++||+|||+.+
T Consensus 176 ~dGvltG----------------------------~~~P~i~~---~~K~~~v--~~~~~~~~~~~~~~~~vI~vGDs~~ 222 (277)
T TIGR01544 176 EDGVLKG----------------------------FKGPLIHT---FNKNHDV--ALRNTEYFNQLKDRSNIILLGDSQG 222 (277)
T ss_pred CCCeEeC----------------------------CCCCcccc---cccHHHH--HHHHHHHhCccCCcceEEEECcChh
Confidence 2333333 55553311 1122222 777889998 89999999999999
Q ss_pred hHHHHHHc
Q 018946 306 GVAGAQRI 313 (348)
Q Consensus 306 Di~aA~~a 313 (348)
|+.||..+
T Consensus 223 Dl~ma~g~ 230 (277)
T TIGR01544 223 DLRMADGV 230 (277)
T ss_pred hhhHhcCC
Confidence 99997766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-11 Score=115.37 Aligned_cols=55 Identities=11% Similarity=-0.034 Sum_probs=49.3
Q ss_pred cCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccc
Q 018946 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
+||+|.+ |+.+++++++++++++||||+. +||.+|+++||++|+|.++....+++
T Consensus 229 gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~ 284 (311)
T PLN02645 229 GKPSTFM--------------MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESML 284 (311)
T ss_pred CCChHHH--------------HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHH
Confidence 4777777 9999999999999999999997 89999999999999999988765554
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.7e-10 Score=115.29 Aligned_cols=154 Identities=17% Similarity=0.195 Sum_probs=95.5
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHH--hcCCCCC
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFL--ASKDAPL 162 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 162 (348)
..++||+||||+.++.+ + +.+...+++ .. | ..+.-..... .+.... ++.+.+.. .....++
T Consensus 11 ~pl~~DlDgTLi~td~l-~-e~~~~~l~~-~p----~--~~~~l~~~~~-~g~a~l-------K~~~a~~~~~d~~~lp~ 73 (479)
T PRK08238 11 LPLVVDLDGTLIRTDLL-H-ESIFALLRR-NP----L--ALLRLPLWLL-RGKAAL-------KRRLARRVDLDVATLPY 73 (479)
T ss_pred CCEEEeCCCCccccchH-H-HHHHHHHHh-Ch----H--HHHHHHHHHH-hcHHHH-------HHHHHhhcCCChhhCCC
Confidence 47899999999999986 3 444444432 11 1 1111111111 111111 11111111 1234678
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
+||+.++|++++++|++++|+|++ ....++.+++++|+ |+.++ +.+++..
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas---~~~~a~~i~~~lGl---Fd~Vi-gsd~~~~----------------------- 123 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATAS---DERLAQAVAAHLGL---FDGVF-ASDGTTN----------------------- 123 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCC---CCEEE-eCCCccc-----------------------
Confidence 899999999999999999999995 67999999999997 55543 3322211
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
.||++.. ....++++ .++++++||+.+|+.+++.+| ..+.|+.
T Consensus 124 -------------------~kg~~K~---------------~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 124 -------------------LKGAAKA---------------AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred -------------------cCCchHH---------------HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECC
Confidence 0333322 22335565 366999999999999999999 5555553
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-11 Score=104.72 Aligned_cols=95 Identities=18% Similarity=0.318 Sum_probs=83.7
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
....-|.+++.+.+++.+|+++.|+|| +.+..+..+.+.+|+.-+...
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A----------------------------- 91 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA----------------------------- 91 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc-----------------------------
Confidence 345678999999999999999999999 468889999999998754321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
.||.+.. |+.|+++++++|++|+||||.. .||.++.++||.|
T Consensus 92 -----------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~t 134 (175)
T COG2179 92 -----------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRT 134 (175)
T ss_pred -----------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEE
Confidence 2899888 9999999999999999999985 7999999999999
Q ss_pred EEECC
Q 018946 318 VVMRS 322 (348)
Q Consensus 318 i~v~~ 322 (348)
|+|..
T Consensus 135 IlV~P 139 (175)
T COG2179 135 ILVEP 139 (175)
T ss_pred EEEEE
Confidence 99974
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.4e-11 Score=105.20 Aligned_cols=95 Identities=21% Similarity=0.207 Sum_probs=76.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc-chheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~-f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
+.++||+.++|+.|+ ++++++|+|++ ....++.+++++++..+ |+.+ ++.+++..
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~---~~~~~~~il~~l~~~~~~f~~i-~~~~d~~~------------------- 99 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAG---LRMYADPVLDLLDPKKYFGYRR-LFRDECVF------------------- 99 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCC---cHHHHHHHHHHhCcCCCEeeeE-EECccccc-------------------
Confidence 568999999999998 57999999996 56889999999999654 4544 33333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.||+ |..+++++|.+|++||+|||+..|+.++.++|+.+-
T Consensus 100 -----------------------~KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 100 -----------------------VKGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -----------------------cCCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1664 356789999999999999999999999999988654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.5e-10 Score=100.96 Aligned_cols=178 Identities=12% Similarity=0.161 Sum_probs=105.5
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCC--CCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC--ANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (348)
.++|.||||.|++.-+.+ .++.+..|+.- ++|+...+..-+........++...... .....+++......
T Consensus 16 ~~aVcFDvDSTvi~eEgI------delA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~-~~qv~~~v~~~k~~ 88 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGI------DELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPL-QVQVEQFVIKQKPT 88 (227)
T ss_pred cCeEEEecCcchhHHhhH------HHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhccc-HHHHHHHHhcCCCc
Confidence 469999999999986654 55555556531 1222222211111111111111111111 34555555555678
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc--cchheeecchhhhhhhcccc-cccccccCCchhH
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQF-VLGKGISSGVDEQ 238 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~--~f~~~i~~~~e~~~~~~~~~-v~g~~v~~~~~~~ 238 (348)
+-||++++...|+++|..|+++|++ +...+..+.+.||++. .+...+.-+..+ .|.++ +.+..+.
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGG---F~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G---k~~gfd~~~ptsd------ 156 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGG---FRQLIEPVAEQLGIPKSNIYANELLFDKDG---KYLGFDTNEPTSD------ 156 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCC---hHHHHHHHHHHhCCcHhhhhhheeeeccCC---cccccccCCcccc------
Confidence 8999999999999999999999997 8899999999999986 554443222111 12221 1111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
+-.+.++ +....+ ++.-..++||||+.+|++|..- |...+
T Consensus 157 ----------------------------------sggKa~~---i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi 196 (227)
T KOG1615|consen 157 ----------------------------------SGGKAEV---IALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFI 196 (227)
T ss_pred ----------------------------------CCccHHH---HHHHHh--CCChheeEEecCCccccccCCc-hhhhh
Confidence 1122233 333334 8888999999999999997665 44334
Q ss_pred EE
Q 018946 319 VM 320 (348)
Q Consensus 319 ~v 320 (348)
..
T Consensus 197 ~~ 198 (227)
T KOG1615|consen 197 GF 198 (227)
T ss_pred cc
Confidence 33
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=112.90 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=78.9
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH----cCCcccchheeecchhhhhhhcccccccccccCCchh
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~----lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
++||+.++|+.|+++|++++|+|+ +....+..++++ +++.++|+.+..+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 478999999999999999999999 567889999998 8888888765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
.||+|+. ++.+++++|+.+++++||||++.|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 1888888 9999999999999999999999999999998764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-09 Score=101.51 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=111.1
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhccc--CcHHHHHHHHhhH---HHHHHHHHhcCCC
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA--GDEDRMLVLFFNR---KNALDEFLASKDA 160 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~ 160 (348)
.|+||||+||+|-+.. ..+++.++.. .+..++... ..... .-..++....... .+.+.+.+. .+
T Consensus 2 LvvfDFD~TIvd~dsd------~~v~~~l~~~--~~~~~l~~~-~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~--~i 70 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD------DWVIELLPPE--ELPEELRES-YPKGGWTEYMDRVLQLLHEQGVTPEDIRDALR--SI 70 (234)
T ss_pred EEEEeCCCCccCCccH------HHHHHhcCCc--ccHHHHHHh-ccccchHHHHHHHHHHHHHcCCCHHHHHHHHH--cC
Confidence 6899999999998764 3344445544 232332222 22110 0011122111111 344445443 48
Q ss_pred CCCCcHHHHHHHH--HHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 161 PLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 161 ~l~pGv~elL~~L--k~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
++.||+.++++.+ ++.|+.+.|+|.+ ....++.++++.|+...|+.+ +++...... .+.+.-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDa---Ns~fI~~iL~~~gl~~~f~~I-~TNpa~~~~--~G~l~v---------- 134 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDA---NSFFIETILEHHGLRDCFSEI-FTNPACFDA--DGRLRV---------- 134 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCC---cHhHHHHHHHhCCCccccceE-EeCCceecC--CceEEE----------
Confidence 9999999999999 4579999999996 679999999999999988764 444221110 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCc--cCCCCCch--hhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVD--IDTSSPES--LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~--i~~~~~~~--~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
.|.-. . ..-|.+ +-+++..|..-..+-|+.-++++||||+.+|+-.+.+.+
T Consensus 135 ------------------------~pyh~h~C-~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 135 ------------------------RPYHSHGC-SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred ------------------------eCccCCCC-CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 01000 0 001222 344444444444446788899999999999999999987
Q ss_pred Cc-EEEECCCCC
Q 018946 315 MP-CVVMRSRCI 325 (348)
Q Consensus 315 ~~-~i~v~~~~~ 325 (348)
-. .|..+.++.
T Consensus 190 ~~D~v~~R~~~~ 201 (234)
T PF06888_consen 190 PRDVVFPRKGYP 201 (234)
T ss_pred CCCEEecCCCCh
Confidence 74 555555543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-10 Score=101.03 Aligned_cols=104 Identities=15% Similarity=0.261 Sum_probs=70.3
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc----------ccchheeecchhhhhhhccccccc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~----------~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
.+.++|+|.++|..|+++|++++++|.+ +....++.+|+.+++. ++|+..
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~------------------ 102 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYL------------------ 102 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEE------------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchh------------------
Confidence 4678999999999999999999999965 3578999999999998 444432
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
+||++ + .+.-|+.+.+..|++.++++||+|-..++.
T Consensus 103 --------------------------------------eI~~g---s---K~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 103 --------------------------------------EIYPG---S---KTTHFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp --------------------------------------EESSS-------HHHHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred --------------------------------------heecC---c---hHHHHHHHHHhcCCChhHEEEecCchhcce
Confidence 22211 0 111288899999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCCC
Q 018946 309 GAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~~ 326 (348)
...+.|..+|.|++|.+.
T Consensus 139 ~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHHTTT-EEEE-SSS--H
T ss_pred eeEecCcEEEEeCCCCCH
Confidence 999999999999986543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.2e-10 Score=99.91 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=74.1
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....+..+++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~---~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGR---KAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEECC---CCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 789999999999999995 567889999999998876421
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
||.|++ ++.+++++|+++++|+||||+.+|+.+++.+|+. +.+.+..
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAH 121 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcC
Confidence 555666 8999999999999999999999999999999997 6666543
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-10 Score=116.27 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=73.5
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCC---------CCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGK---------SGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~---------~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
++|||.+.|+.|+++|++++|+||... +....+..+++.+|+. |+.++ +.+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvii-a~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFI-AIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEE-eCCCC---------------
Confidence 579999999999999999999999532 0013477888888885 55432 22211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC----CCCCcEEEEecCHhhHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg----v~p~~~i~VGDs~~Di~ 308 (348)
..+||+|.+ +..++++++ +++++++||||+..|+.
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 135999999 999999984 89999999999998988
Q ss_pred HHHHcCC
Q 018946 309 GAQRIGM 315 (348)
Q Consensus 309 aA~~aG~ 315 (348)
+|.++|-
T Consensus 299 ~g~~ag~ 305 (526)
T TIGR01663 299 NGKAAGK 305 (526)
T ss_pred HHHhcCC
Confidence 8777765
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.8e-09 Score=97.72 Aligned_cols=110 Identities=10% Similarity=-0.039 Sum_probs=74.2
Q ss_pred CCCCCcHHHHHH-HHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecch-hhhhhhcccccccccccCCchh
Q 018946 160 APLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 160 ~~l~pGv~elL~-~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~-e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..++||+.++|+ .++++|++++|+||+ ++..++.+.+.+++..... + ++.+ ++. .++.+.|.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas---~~~~~~~ia~~~~~~~~~~-~-i~t~le~~---~gg~~~g~-------- 156 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGS---PQPLVEAVYFDSNFIHRLN-L-IASQIERG---NGGWVLPL-------- 156 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCC---cHHHHHHHHHhccccccCc-E-EEEEeEEe---CCceEcCc--------
Confidence 357999999996 788899999999994 7899999998876633222 2 2322 221 11222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
++.-+.. .+.+.++++.+.+.+.+.|||.+|+.+...+|-+.
T Consensus 157 -----------------------------------~c~g~~K---v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 157 -----------------------------------RCLGHEK---VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRW 198 (210)
T ss_pred -----------------------------------cCCChHH---HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcE
Confidence 1111122 23344555666678999999999999999999998
Q ss_pred EEECCC
Q 018946 318 VVMRSR 323 (348)
Q Consensus 318 i~v~~~ 323 (348)
++.+++
T Consensus 199 ~Vnp~~ 204 (210)
T TIGR01545 199 RVSKRG 204 (210)
T ss_pred EECcch
Confidence 877653
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-09 Score=96.98 Aligned_cols=83 Identities=10% Similarity=0.107 Sum_probs=68.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
.++.|+++|++++|+||. ....+..+++.+|+..+|...
T Consensus 56 ~i~~L~~~Gi~v~I~T~~---~~~~v~~~l~~lgl~~~f~g~-------------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGR---KSKLVEDRMTTLGITHLYQGQ-------------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCceeecCC--------------------------------------
Confidence 567778899999999995 568889999999998776410
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
++.++. ++.+++++|+++++|+||||+.+|+.+++++|+.++ +.
T Consensus 95 --------------~~k~~~--------------l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~ 138 (183)
T PRK09484 95 --------------SNKLIA--------------FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VA 138 (183)
T ss_pred --------------CcHHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cC
Confidence 222233 899999999999999999999999999999999954 54
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.3e-09 Score=94.42 Aligned_cols=169 Identities=14% Similarity=0.179 Sum_probs=109.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe-------------------eecchhhhhhhc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-------------------IVGNEEVERSLY 222 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~-------------------i~~~~e~~~~~~ 222 (348)
+.||+.|.+++|+.++.+|-.+||.+++....+..-+.++|++---+.+ ++-.++ ....|
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~-a~~dF 102 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDD-ALEDF 102 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEccc-chhhC
Confidence 6899999999999999999999999887788888888888874211111 111222 22346
Q ss_pred cccccccc--ccCCchhH------------HHHHHHHHH--HHHHHHHHHHHHh----------------------hcCC
Q 018946 223 GQFVLGKG--ISSGVDEQ------------LATEARKAV--SAQKQEIAEEVAS----------------------MLKL 264 (348)
Q Consensus 223 ~~~v~g~~--v~~~~~~~------------~~~~~~k~~--~~~~~~i~~~~~~----------------------~~KP 264 (348)
++|-+... |..|..++ +..|.+|+. +--|.|-+..+.+ .+||
T Consensus 103 ~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP 182 (262)
T KOG3040|consen 103 DGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKP 182 (262)
T ss_pred CCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCC
Confidence 66665422 23343322 111111100 0011121221111 7899
Q ss_pred CCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCcEEEECCCCCCcccccccc----cchhH
Q 018946 265 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSKTQ----RLADM 339 (348)
Q Consensus 265 ~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~~~l~~~~----~~~d~ 339 (348)
+|.. |+.+++.+|++|++++||||-.+ |+-+|.+.||..|.|.++--+..+..... .++|.
T Consensus 183 ~~~f--------------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~ 248 (262)
T KOG3040|consen 183 SPFF--------------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADN 248 (262)
T ss_pred CHHH--------------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhh
Confidence 9999 99999999999999999999875 89999999999999999866553333332 24555
Q ss_pred HHHhhc
Q 018946 340 LCRILK 345 (348)
Q Consensus 340 l~~~l~ 345 (348)
+.+..+
T Consensus 249 f~~AVd 254 (262)
T KOG3040|consen 249 FADAVD 254 (262)
T ss_pred HHHHHH
Confidence 555443
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.3e-09 Score=98.31 Aligned_cols=73 Identities=11% Similarity=0.070 Sum_probs=62.8
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCccccccc----cc
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKT----QR 335 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~----~~ 335 (348)
.+||++.| +..+.++++++|++|+||||+. +||.-+++.|+++++|-++....++.... ..
T Consensus 222 ~GKP~~~m--------------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~ 287 (306)
T KOG2882|consen 222 LGKPSTFM--------------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKM 287 (306)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCC
Confidence 68999999 9999999999999999999997 59999999999999999998876655433 33
Q ss_pred chhHHHHhhccc
Q 018946 336 LADMLCRILKSI 347 (348)
Q Consensus 336 ~~d~l~~~l~~i 347 (348)
++|++++.+.++
T Consensus 288 ~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 288 VPDYYADSLGDL 299 (306)
T ss_pred CCchHHhhHHHH
Confidence 588888877655
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.6e-09 Score=101.07 Aligned_cols=71 Identities=11% Similarity=0.138 Sum_probs=53.1
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHc--------CC-----CCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCC
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l--------gv-----~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
++||+|.+ |+.+++.+ ++ ++++++||||.. +||.+|+++||.+|+|.++...
T Consensus 231 ~GKP~~~~--------------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~ 296 (321)
T TIGR01456 231 LGKPTKLT--------------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYN 296 (321)
T ss_pred cCCCChHH--------------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccC
Confidence 58999999 88888877 43 457999999997 8999999999999999998555
Q ss_pred ccccc---ccccchhHHHHhhc
Q 018946 327 TLPVS---KTQRLADMLCRILK 345 (348)
Q Consensus 327 ~~~l~---~~~~~~d~l~~~l~ 345 (348)
..+.. ....+++++.+.+.
T Consensus 297 ~~~~~~~~~p~~vv~~l~e~~~ 318 (321)
T TIGR01456 297 GGDDLKECKPTLIVNDVFDAVT 318 (321)
T ss_pred CCCCCCCCCCCEEECCHHHHHH
Confidence 44321 12334555555544
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.89 E-value=1e-09 Score=102.24 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=73.6
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
+|++.++++.++++|+++ |+||.. .......+..+|...++..+.. ..++.+.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d---~~~~~~~~~~~~~g~~~~~i~~-------------~g~~~~~---------- 192 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPD---RGINQHGIYRYGAGYYAELIKQ-------------LGGKVIY---------- 192 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCC---EeccCCCceEecccHHHHHHHH-------------hCCcEec----------
Confidence 578899999998899997 889953 3333334455555554442200 1111111
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcEEEEecC-HhhHHHHHHcCCcEEEE
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~i~VGDs-~~Di~aA~~aG~~~i~v 320 (348)
.+||+|.+ |+.+++++|.. +++|+||||+ .+||.+|+++||.+++|
T Consensus 193 ------------------~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 193 ------------------SGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred ------------------CCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 24999999 99999999975 6799999999 69999999999999998
Q ss_pred CC
Q 018946 321 RS 322 (348)
Q Consensus 321 ~~ 322 (348)
.+
T Consensus 241 ~t 242 (242)
T TIGR01459 241 LT 242 (242)
T ss_pred eC
Confidence 64
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.4e-08 Score=93.70 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=33.6
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
++.+++++|++++++++|||+.||+.+++.+|+.++
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~va 239 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVA 239 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEE
Confidence 889999999999999999999999999999998543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.2e-08 Score=94.97 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=40.1
Q ss_pred cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc
Q 018946 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (348)
Q Consensus 157 ~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f 207 (348)
....++.||+.++|+.|+++|++++++||........+...++++|+...+
T Consensus 114 ~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 114 AAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred cCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 345678999999999999999999999997433344455778888987644
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.7e-08 Score=90.23 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=79.5
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCC---C-CC-----c---hHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYG---K-SG-----D---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~---~-~~-----~---~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.+.||+.+.+..|++.|++++++||-+ + .+ + ..+...++..|. -++.+.++-. ..
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph----------~p 97 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPH----------HP 97 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCC----------CC
Confidence 3578999999999999999999999931 0 00 0 112223333332 1222211110 00
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
. +-+.++||.|.+ ++.+++++++++++.++|||...|+
T Consensus 98 ~----------------------------~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dl 135 (181)
T COG0241 98 E----------------------------DNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDL 135 (181)
T ss_pred C----------------------------CCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHH
Confidence 0 114578999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCCC
Q 018946 308 AGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~~ 326 (348)
++|.++|++.+.+.++...
T Consensus 136 q~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 136 QAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred HHHHHCCCCceEEEcCccc
Confidence 9999999998888765443
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.7e-08 Score=87.98 Aligned_cols=40 Identities=20% Similarity=0.502 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
|++.++|+.++++|++++|+|++ +...++.+++.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~---~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGS---PDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEE---EHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHcCCCce
Confidence 66669999999999999999994 78999999999999763
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.7e-08 Score=88.85 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=43.5
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCcEEEECCC
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~-i~VGDs~-~Di~aA~~aG~~~i~v~~~ 323 (348)
.+||+|++ |+.++++++++++++ +||||+. +||.+|+++||++|+|.++
T Consensus 186 ~~KP~~~~--------------~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 186 VGKPSPAI--------------YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ecCCCHHH--------------HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 45777777 999999999999887 9999998 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.1e-07 Score=84.28 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=35.5
Q ss_pred HHHHHHHcCC-----CCCcEEEEecCH-hhHHHHHHcCCcEEEECCCC
Q 018946 283 LRAGAEYAEK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 283 ~~~a~~~lgv-----~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~ 324 (348)
+..+.++++. .|+++++|||-. .||.+|.+.|+.+|++..+.
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 5666677654 499999999975 79999999999999998764
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.9e-08 Score=95.64 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=86.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc-C-------Ccccchheeecchhhhhhhccc------c
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQ------F 225 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l-g-------l~~~f~~~i~~~~e~~~~~~~~------~ 225 (348)
+...||+.++|+.|+++|++++|+||+ ....+..+++.+ | +.++|+.++.+.. +..+|.. +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS---~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~--KP~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNS---DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDAR--KPGFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCC--CCcccCCCCceEEE
Confidence 456899999999999999999999994 678999999996 7 8999997765543 2223321 0
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ- 304 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~- 304 (348)
...++.... . .+.+ .+| ..+|...+ +....+.+|+.++++++|||+.
T Consensus 258 ~~~~g~~~~------------~---------~~~~-l~~-g~vY~gGn---------~~~~~~~l~~~~~~vlYvGD~i~ 305 (343)
T TIGR02244 258 DVETGSLKW------------G---------EVDG-LEP-GKVYSGGS---------LKQFHELLKWRGKEVLYFGDHIY 305 (343)
T ss_pred eCCCCcccC------------C---------cccc-ccC-CCeEeCCC---------HHHHHHHHCCCCCcEEEECCcch
Confidence 000000000 0 0000 011 11221111 6677889999999999999986
Q ss_pred hhHHHHH-HcCCcEEEECC
Q 018946 305 SGVAGAQ-RIGMPCVVMRS 322 (348)
Q Consensus 305 ~Di~aA~-~aG~~~i~v~~ 322 (348)
.||.+++ .+||.||+|..
T Consensus 306 ~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 306 GDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred HHHHhhHHhcCcEEEEEch
Confidence 6999998 99999999874
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.1e-08 Score=89.46 Aligned_cols=51 Identities=8% Similarity=-0.047 Sum_probs=46.4
Q ss_pred hcCCCCcc--CCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 261 MLKLSVDI--DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 261 ~~KP~p~i--~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
+.||+|++ |- ++.+++++|+.|++|+||+|...++++|++.||.++.+.++
T Consensus 155 l~KPdp~iK~yH------------le~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYH------------LKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHH------------HHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 45999999 33 49999999999999999999999999999999999999864
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-07 Score=82.61 Aligned_cols=106 Identities=9% Similarity=0.072 Sum_probs=73.8
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH---cCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK---LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~---lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
..+++|++.+.|++-++.|++|.|.|.++ .+....++.. .++..+|+.. |+. ..|.
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGS---V~AQkL~Fghs~agdL~~lfsGy-----------fDt-------tiG~ 159 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGS---VKAQKLFFGHSDAGDLNSLFSGY-----------FDT-------TIGK 159 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCC---chhHHHhhcccccccHHhhhcce-----------eec-------cccc
Confidence 35689999999999999999999999973 2333333222 1222233211 111 1110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
|-... .|..+++..|++|.+++|+.|.+..+.||+.+||
T Consensus 160 ---------------------------KrE~~--------------SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 160 ---------------------------KRESQ--------------SYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred ---------------------------cccch--------------hHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 11111 1899999999999999999999999999999999
Q ss_pred cEEEECCCCCC
Q 018946 316 PCVVMRSRCIT 326 (348)
Q Consensus 316 ~~i~v~~~~~~ 326 (348)
.|+++..+.+.
T Consensus 199 ~t~l~~R~g~~ 209 (229)
T COG4229 199 ATGLAVRPGNA 209 (229)
T ss_pred heeeeecCCCC
Confidence 99988765543
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.4e-08 Score=86.10 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=64.0
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCc-----------hHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~-----------~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
+.|+|.+.|..|.++|+.++|+||-..-.. ..+..+++.+++.-. ++++...
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~---~~~a~~~-------------- 92 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ---VYAAPHK-------------- 92 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE---EEECGCS--------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE---EEecCCC--------------
Confidence 346899999999999999999998531111 233444555554411 1111100
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC----CCCcEEEEecC---
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 303 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv----~p~~~i~VGDs--- 303 (348)
-.+|||.+.| ++.+.+.++. +.++++||||.
T Consensus 93 ----------------------------d~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 93 ----------------------------DPCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------------------STTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------------------CCCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 0257999999 9999999874 88999999996
Q ss_pred --------HhhHHHHHHcCCcEE
Q 018946 304 --------QSGVAGAQRIGMPCV 318 (348)
Q Consensus 304 --------~~Di~aA~~aG~~~i 318 (348)
..|..=|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 679999999999753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.6e-07 Score=82.09 Aligned_cols=174 Identities=21% Similarity=0.295 Sum_probs=102.2
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHH---HHHHHHhhHHHHHHHHHhcCCCCC
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED---RMLVLFFNRKNALDEFLASKDAPL 162 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l 162 (348)
.|+-|+|||++-.+.. .-+.+.+|.+ +|. .++...+.....-.+ +|............+++.. .+.+
T Consensus 5 vi~sDFDGTITl~Ds~------~~itdtf~~~--e~k-~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk-~i~I 74 (220)
T COG4359 5 VIFSDFDGTITLNDSN------DYITDTFGPG--EWK-ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLK-DIKI 74 (220)
T ss_pred EEEecCCCceEecchh------HHHHhccCch--HHH-HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHh-hccc
Confidence 6788999999865542 4455556665 454 445554444332222 2222111112333344433 3689
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcC-Ccccchheeecchhhhhhhcc-cccccccccCCchhHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERSLYG-QFVLGKGISSGVDEQLA 240 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lg-l~~~f~~~i~~~~e~~~~~~~-~~v~g~~v~~~~~~~~~ 240 (348)
.||.+++++.++++++++.|+|+| .+..+..+++.++ -++...+-+++++.....--. -++.-+.-..|.+
T Consensus 75 dp~fKef~e~ike~di~fiVvSsG---m~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d---- 147 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSSG---MDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD---- 147 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeCC---CchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC----
Confidence 999999999999999999999998 5789999999775 344444445554433221000 0000011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
++.+| ..+.-.++.++|.|||.+|+.||+....-.+
T Consensus 148 -----------------------------------K~~vI-------~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 -----------------------------------KSSVI-------HELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred -----------------------------------cchhH-------HHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 12222 4455567789999999999999998766443
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.5e-07 Score=80.66 Aligned_cols=191 Identities=13% Similarity=0.122 Sum_probs=109.0
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHH-----HHHHHH---hhHHHHHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-----RMLVLF---FNRKNALDEF 154 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~---~~~~~~~~~~ 154 (348)
+...++||+|-||+|-+.. +-+.+.++.. +...++......+.+ ++..+. ..+.....+.
T Consensus 12 ~ril~~FDFD~TIid~dSD------~wVv~~lp~~------~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~ 79 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD------NWVVDELPTT------DLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQV 79 (256)
T ss_pred CcEEEEEecCceeecCCcc------hHHHHhcccc------hhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 4559999999999997764 2222323322 112222222111111 111110 1113344444
Q ss_pred HhcCCCCCCCcHHHHHHHHHHCCC-cEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 155 LASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 155 ~~~~~~~l~pGv~elL~~Lk~~Gi-~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
+. .+|+.||+.++|+.+++.|. .+.|+|.+ ....++.+++.+|+.++|..+ +++.......=...|.....++
T Consensus 80 ~r--~iP~~Pgmv~lik~~ak~g~~eliIVSDa---NsfFIe~~Lea~~~~d~F~~I-fTNPa~~da~G~L~v~pyH~~h 153 (256)
T KOG3120|consen 80 LR--SIPIVPGMVRLIKSAAKLGCFELIIVSDA---NSFFIEEILEAAGIHDLFSEI-FTNPACVDASGRLLVRPYHTQH 153 (256)
T ss_pred Hh--cCCCCccHHHHHHHHHhCCCceEEEEecC---chhHHHHHHHHccHHHHHHHH-hcCCcccCCCCcEEeecCCCCC
Confidence 43 48999999999999999985 99999985 469999999999999999854 4443222110000011000000
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHH--cCCCCCcEEEEecCHhhHHHHH
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--AEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~--lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
+.. -.|.++=|+...-+..++. -|+.-++.+||||+.+|+-.-.
T Consensus 154 ---------------------------------sC~-~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l 199 (256)
T KOG3120|consen 154 ---------------------------------SCN-LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVL 199 (256)
T ss_pred ---------------------------------ccC-cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcch
Confidence 000 0245555554434444444 4677789999999999987766
Q ss_pred HcC-CcEEEECCCCC
Q 018946 312 RIG-MPCVVMRSRCI 325 (348)
Q Consensus 312 ~aG-~~~i~v~~~~~ 325 (348)
..- ..++.-+.++.
T Consensus 200 ~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 200 RLRACDVAMPRKGFP 214 (256)
T ss_pred hcccCceecccCCCc
Confidence 654 45555544543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.6e-07 Score=84.40 Aligned_cols=93 Identities=10% Similarity=0.158 Sum_probs=68.4
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++||+.++|+.|+++|++++++||..++ .......++++|+.. +|+.++.+++ +...
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~~~L~~~gl~~~~~~~Ii~s~~-~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLHKTLKSLGINADLPEMIISSGE-IAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHHHHHHHCCCCccccceEEccHH-HHHH------------------
Confidence 457999999999999999999999997542 222236789999987 8886644332 2110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
. +..++++++++|++|++|||+..|+......|.
T Consensus 83 -----------------------------~--------------l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -----------------------------M--------------ILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----------------------------H--------------HHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0 566667788888899999998888877765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.7e-07 Score=97.28 Aligned_cols=85 Identities=14% Similarity=0.221 Sum_probs=68.6
Q ss_pred CCCCCcHHHHHHHHHHCCC-cEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi-~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
-+++||+.++|+.|+++|+ +++++|| +....++.+++++|++++|....
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~--------------------------- 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELL--------------------------- 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccC---------------------------
Confidence 4689999999999999999 9999999 47899999999999988765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
|+.+ ....++++...++++||||+.+|+.+++++|+
T Consensus 411 ----------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 411 ----------------------------------PEDK-------LEIVKELREKYGPVAMVGDGINDAPALAAADV 446 (536)
T ss_pred ----------------------------------cHHH-------HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE
Confidence 0111 12335555566899999999999999999996
|
. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.2e-06 Score=82.10 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=39.1
Q ss_pred chhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 274 ESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 274 ~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
+...|.. |++.+++++|++++++++|||+.||+.+.+.+|..+++=+
T Consensus 186 ~g~~K~~-al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N 232 (264)
T COG0561 186 KGVSKGY-ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN 232 (264)
T ss_pred CCCchHH-HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC
Confidence 3344543 3888999999999999999999999999999999866544
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.50 E-value=1e-06 Score=80.27 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++-+
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 192 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVAN 192 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCC
Confidence 788999999999999999999999999999999755543
|
catalyze the same reaction as SPP. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.1e-07 Score=97.05 Aligned_cols=47 Identities=26% Similarity=0.416 Sum_probs=42.3
Q ss_pred CCCCCcHHHHHHHHHHCC-CcEEEEeCCCCCCchHHHHHHHHcCCcccchh
Q 018946 160 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~G-i~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~ 209 (348)
.+++||+.++|+.|+++| ++++++||. ....++.+++++|++++|..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd---~~~~a~~i~~~lgi~~~f~~ 430 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGD---NRSAAEAVAAELGIDEVHAE 430 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCC---CHHHHHHHHHHhCCCeeecc
Confidence 568999999999999999 999999994 67899999999999887753
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.47 E-value=4e-07 Score=86.99 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=42.4
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecch
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~ 215 (348)
||+.++|++|+++|++++|+|++ ....+...++++|+..+|+.++.+++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~---~Re~v~~~L~~lGLd~YFdvIIs~Gd 197 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYG---DRDHVVESMRKVKLDRYFDIIISGGH 197 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECC---CHHHHHHHHHHcCCCcccCEEEECCc
Confidence 89999999999999999999996 45778899999999999987654443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.3e-07 Score=81.25 Aligned_cols=39 Identities=18% Similarity=0.119 Sum_probs=35.5
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++-+
T Consensus 162 l~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 200 (230)
T PRK01158 162 LKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN 200 (230)
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC
Confidence 889999999999999999999999999999999865543
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.9e-07 Score=79.58 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=76.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
+..|||+.+||+.|.+. +.++|.|++ ....++.+++.++... +|...+....-. .
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~---~~~yA~~il~~ldp~~~~f~~~l~r~~~~-~------------------- 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTAS---LEEYADPVLDILDRGGKVISRRLYRESCV-F------------------- 96 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCC---cHHHHHHHHHHHCcCCCEEeEEEEccccE-E-------------------
Confidence 45799999999999988 999999996 5789999999999875 776554322110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.||. |.+.+..+|.++++||+|||++.++.++.++|+.+.
T Consensus 97 -----------------------~~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 -----------------------TNGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -----------------------eCCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111 234567789999999999999999999999999877
Q ss_pred EEC
Q 018946 319 VMR 321 (348)
Q Consensus 319 ~v~ 321 (348)
...
T Consensus 137 ~f~ 139 (162)
T TIGR02251 137 SWF 139 (162)
T ss_pred CCC
Confidence 665
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.5e-07 Score=82.22 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=25.7
Q ss_pred EEEecCHhhHHHHHHcCCcEEEECCCCCCccc
Q 018946 298 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLP 329 (348)
Q Consensus 298 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~ 329 (348)
++|+|++..+..+...|+++|++..+++....
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~ 170 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDES 170 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCC
Confidence 89999999999999999999999999988765
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.3e-06 Score=91.28 Aligned_cols=42 Identities=26% Similarity=0.484 Sum_probs=38.5
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
.+++||+.++|+.|+++|++++++|+. ....++.+.+.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd---~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGD---NRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHcCCc
Confidence 467999999999999999999999994 678999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-05 Score=74.97 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|+++ +++++|||+.||+.+++.+|+.+++-+.
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 788899999999 9999999999999999999998776653
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.5e-05 Score=73.76 Aligned_cols=119 Identities=17% Similarity=0.268 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--cc-chh-ee------ecchhhhhhhcccccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RI-SKI-KI------VGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~-f~~-~i------~~~~e~~~~~~~~~v~g~ 229 (348)
....+.+.++++.+.++|+++..+|....+.....-..++.+|++ .. |.. .. .........++.++....
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 346789999999999999999999998766666677777788875 11 110 00 011111122223333322
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~a 309 (348)
+...| .++...+.+.|..|+.+|||+|+..++..
T Consensus 160 ~~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~s 193 (252)
T PF11019_consen 160 GQDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLKS 193 (252)
T ss_pred CCccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 22221 22899999999999999999999987654
Q ss_pred ----HHHcCCcEEEECCCC
Q 018946 310 ----AQRIGMPCVVMRSRC 324 (348)
Q Consensus 310 ----A~~aG~~~i~v~~~~ 324 (348)
+...|+..+++....
T Consensus 194 v~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 194 VEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred HHHHHhhCCCcEEEEEEcc
Confidence 445689888887643
|
The function is not known. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.5e-06 Score=74.35 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 7889999999999999999999999999999988654
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-06 Score=92.71 Aligned_cols=86 Identities=13% Similarity=0.211 Sum_probs=68.4
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++||+.+.|++|++.|++++++|+. ....++.+.+.+|+.++|....
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd---~~~~a~~ia~~lgi~~~~~~~~----------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGD---NPTTANAIAKEAGIDEVIAGVL----------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCCEEEeCCC-----------------------------
Confidence 67999999999999999999999994 6788899999999987654220
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
|+.+ ..+.++++..+++++||||+.||+.+++.+|+..
T Consensus 698 --------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 698 --------------------------------PDGK-------AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred --------------------------------HHHH-------HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 0111 1233556667889999999999999999999944
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.4e-05 Score=72.70 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++-+
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~n 190 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVAN 190 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCC
Confidence 889999999999999999999999999999999866654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.7e-06 Score=78.04 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
+++.+++++|+++++++.|||+.||+.|.+.+|..+++-+
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 231 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN 231 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC
Confidence 3899999999999999999999999999999998755543
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.09 E-value=8e-06 Score=75.95 Aligned_cols=56 Identities=25% Similarity=0.360 Sum_probs=41.8
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
+.+.+.....++.||+.+|++.++++|+.|.++||...+.......-|.+.|+..+
T Consensus 105 w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~ 160 (229)
T PF03767_consen 105 WDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW 160 (229)
T ss_dssp HHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred HHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence 33444444457899999999999999999999999755444556666777786543
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=9e-06 Score=77.92 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhh
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~ 217 (348)
||+.++|++|+++|++++|+||+ ....+...++.+|+..+|+.++.++...
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIICGGRKA 201 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEECCCcc
Confidence 78999999999999999999996 4578899999999999998776655433
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.8e-05 Score=67.28 Aligned_cols=38 Identities=29% Similarity=0.402 Sum_probs=28.1
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~ 200 (348)
.|++.++++.++++|++++++|+...+.....+..++.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 58999999999999999999999632111222456665
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.7e-05 Score=82.94 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=39.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
+++||+.+.|+.|++.|++++++|+ .....++.+.+.+|++.+
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFR 610 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCee
Confidence 7899999999999999999999999 468999999999999643
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2e-05 Score=66.60 Aligned_cols=51 Identities=18% Similarity=0.117 Sum_probs=45.1
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheee
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~ 212 (348)
.+.++|.|++++..+|+.|+.+..+|= |+...+-..++.+++..||..+++
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~Vi 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIVI 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEEe
Confidence 367899999999999999999999995 578888899999999999997753
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.4e-05 Score=69.48 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=57.9
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCCC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPL 162 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 162 (348)
...+||||+|.|+++..+. .+.+. +|-. .++. ..+.+.+.....++
T Consensus 76 g~~A~V~DIDET~LsN~py---~~~~~----~g~~--~~~~-------------------------~~~~~wv~~~~apa 121 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPY---YKKHG----YGTE--KTDP-------------------------TAFWLWLGKGAAPA 121 (229)
T ss_pred CCcEEEEccccccccCHHH---HHHhc----cCCC--cCCH-------------------------HHHHHHHHcCCCCC
Confidence 4569999999999997754 11111 1111 1111 12222334455689
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
.|++.++++.|+++|++|.++|+...........-|.+.|+..+
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999999999632122225556667777654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.7e-05 Score=66.97 Aligned_cols=84 Identities=12% Similarity=0.152 Sum_probs=68.9
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
-|+.+.+.|++++|+|+. ....++.-.+.||+.+++..+
T Consensus 43 Gik~l~~~Gi~vAIITGr---~s~ive~Ra~~LGI~~~~qG~-------------------------------------- 81 (170)
T COG1778 43 GIKLLLKSGIKVAIITGR---DSPIVEKRAKDLGIKHLYQGI-------------------------------------- 81 (170)
T ss_pred HHHHHHHcCCeEEEEeCC---CCHHHHHHHHHcCCceeeech--------------------------------------
Confidence 467778889999999996 458899999999998766432
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
....++|+.+++++++.+++|.||||-.+|+....+.|.++..-.
T Consensus 82 ----------------------------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~d 126 (170)
T COG1778 82 ----------------------------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVAD 126 (170)
T ss_pred ----------------------------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccc
Confidence 001123999999999999999999999999999999999876543
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00067 Score=64.37 Aligned_cols=41 Identities=17% Similarity=0.090 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHc---CCcEEEECCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSR 323 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a---G~~~i~v~~~ 323 (348)
++.+++.+|+..+++++|||..+|+.+-+.+ |..+|.|...
T Consensus 179 l~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 179 IAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred HHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 7888999999999999999999999998887 3345666543
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00036 Score=71.95 Aligned_cols=104 Identities=18% Similarity=0.213 Sum_probs=67.2
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecch-hh-hhhhcccccccccccCCchhH
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~-e~-~~~~~~~~v~g~~v~~~~~~~ 238 (348)
++|.+.+. ++++|. ++|+|. +++..++.+.+. +|++.. ++.+ ++ ..+.|++.+.|.+...|
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~G---- 174 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVG---- 174 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCcc----
Confidence 56666554 456774 499999 478999999976 898863 3332 33 35566666665433222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
+.. .+.+.+.+|.+... ++.|||.+|..+...++-+.+
T Consensus 175 --------------------------------------e~K---v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 175 --------------------------------------DHK---RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred --------------------------------------HHH---HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 111 22333556654344 899999999999999998876
Q ss_pred EECCC
Q 018946 319 VMRSR 323 (348)
Q Consensus 319 ~v~~~ 323 (348)
+-.+.
T Consensus 213 V~~~~ 217 (497)
T PLN02177 213 VPRTK 217 (497)
T ss_pred eCCCC
Confidence 65533
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.1e-05 Score=84.12 Aligned_cols=113 Identities=24% Similarity=0.339 Sum_probs=74.7
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++||+.+.|+.|+++|+++.++|+ .....+..+.+.+|+...++..+ ++++.... .++++
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~v-~g~~l~~~--------------~~~~l- 588 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQSV-SGEKLDAM--------------DDQQL- 588 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCcee-EhHHhHhC--------------CHHHH-
Confidence 7899999999999999999999999 46789999999999987655432 33332210 01100
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCC-CCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~-~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.++ -++..++. ..|+.+..+|.++ ++. .+.+.|+||+.||+.|+++|++...
T Consensus 589 -----------~~~--------~~~~~Vfar~~P~~K~~iv~~l----q~~---g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 589 -----------SQI--------VPKVAVFARASPEHKMKIVKAL----QKR---GDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred -----------HHH--------hhcCeEEEECCHHHHHHHHHHH----HHC---CCEEEEECCCcccHHHHHhCCeeEe
Confidence 011 01222221 1244454444322 333 4789999999999999999996533
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=69.72 Aligned_cols=51 Identities=18% Similarity=0.251 Sum_probs=36.8
Q ss_pred HhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 155 ~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
+.....++.||+.+|.+.++++|++|.++||...........-|.+.|+..
T Consensus 139 v~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 139 VNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred HhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 444567899999999999999999999999974222233444455566654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00026 Score=60.03 Aligned_cols=116 Identities=9% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
+-.+++.+.+.|++|++. +.++|.|+- -...+....+..|+...- +.. +
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgD---r~gsl~~lae~~gi~~~r---v~a--------------------~---- 76 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGD---RKGSLVQLAEFVGIPVER---VFA--------------------G---- 76 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCC---cchHHHHHHHHcCCceee---eec--------------------c----
Confidence 457899999999999999 999999983 345666677777754210 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..++.+. ...+.|+-+-+.|+||||+.||+.+.+++....+
T Consensus 77 --------------------------------a~~e~K~-------~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~ 117 (152)
T COG4087 77 --------------------------------ADPEMKA-------KIIRELKKRYEKVVMVGNGANDILALREADLGIC 117 (152)
T ss_pred --------------------------------cCHHHHH-------HHHHHhcCCCcEEEEecCCcchHHHhhhcccceE
Confidence 1122222 2335666667899999999999999999999988
Q ss_pred EECCCCCCcccccccccchhHHHHhh
Q 018946 319 VMRSRCITTLPVSKTQRLADMLCRIL 344 (348)
Q Consensus 319 ~v~~~~~~~~~l~~~~~~~d~l~~~l 344 (348)
.+.....+...+..++.++.++.+++
T Consensus 118 tiq~e~v~~r~l~~ADvvik~i~e~l 143 (152)
T COG4087 118 TIQQEGVPERLLLTADVVLKEIAEIL 143 (152)
T ss_pred EeccCCcchHHHhhchhhhhhHHHHH
Confidence 88775544444555555555555554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00016 Score=76.93 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=40.1
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f 207 (348)
+++||+.+.+++|++.|++++++|+ .....+..+.+.+|+++++
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~ 489 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFI 489 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEE
Confidence 6899999999999999999999999 4679999999999998654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00027 Score=75.25 Aligned_cols=45 Identities=16% Similarity=0.324 Sum_probs=40.8
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++||+++.+++||+.|+++.++|+ .....+..+.+.+|++++|.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~A 485 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFVA 485 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEEc
Confidence 6899999999999999999999999 56889999999999987553
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00028 Score=75.50 Aligned_cols=45 Identities=24% Similarity=0.488 Sum_probs=40.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++|++.+.+++|++.|+++.++|+ .....++.+.+++|++++..
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~A 581 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRA 581 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhec
Confidence 6899999999999999999999998 56899999999999987654
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00038 Score=65.33 Aligned_cols=41 Identities=20% Similarity=0.069 Sum_probs=33.6
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
++.+++++++++++++++|||.||+.+. ..+...|+|.+..
T Consensus 170 l~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 170 LRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp HHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred HHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 8899999999999999999999999988 7788889998643
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00044 Score=73.18 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCcEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~V--GDs~~Di~aA~~aG~~~i~ 319 (348)
|++.+++.+|++.++++.| ||+.||+.+.+.+|..+++
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3888999999999999999 9999999999999998666
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00024 Score=75.73 Aligned_cols=45 Identities=16% Similarity=0.353 Sum_probs=40.5
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++||+++.+++||+.|+++.++|+ .....+..+.+.+|+++++.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~A 489 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFLA 489 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEEc
Confidence 5799999999999999999999999 56899999999999987543
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.002 Score=57.48 Aligned_cols=109 Identities=11% Similarity=0.131 Sum_probs=66.3
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCC-chHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~-~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~ 241 (348)
..-++++|+--..+|=.++.+|+.+... +.....+.+.+.+.....++ ..|+
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~---------------f~Gd------------ 168 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVI---------------FAGD------------ 168 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCccee---------------eccC------------
Confidence 4457778888888899999999865322 23333344455553322211 1122
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 242 ~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
||.|.-|+ =-.+++.-++. |+.|||.+||.||+++|++.|-+-
T Consensus 169 ---------------------k~k~~qy~------------Kt~~i~~~~~~----IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 169 ---------------------KPKPGQYT------------KTQWIQDKNIR----IHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ---------------------CCCccccc------------ccHHHHhcCce----EEecCCchhhhHHHhcCccceeEE
Confidence 55555543 22333444544 999999999999999999988665
Q ss_pred CC-CCCccccccccc
Q 018946 322 SR-CITTLPVSKTQR 335 (348)
Q Consensus 322 ~~-~~~~~~l~~~~~ 335 (348)
.. ......++.+..
T Consensus 212 RAaNSTy~PlP~aGg 226 (237)
T COG3700 212 RAANSTYKPLPQAGG 226 (237)
T ss_pred ecCCccCCcCcccCC
Confidence 43 334445655433
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0057 Score=56.58 Aligned_cols=109 Identities=10% Similarity=0.143 Sum_probs=75.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
..++++...++.-+++|+++.|.|.+. ......+...-+-.+.- +...+.|+.-+ |.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgs---v~AqKllfg~s~~gdl~--------~y~~gyfDt~i-G~----------- 179 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGS---VAAQKLLFGYSDAGDLR--------KYISGYFDTTI-GL----------- 179 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCc---HHHHHHHHcccCcchHH--------HHhhhhhhccc-cc-----------
Confidence 578999999999999999999999972 33333333332211110 12222222211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
|=--.. |..+.+.+|.++.+++|.-|-..-..+|+.+|+.+.++
T Consensus 180 ----------------------K~e~~s--------------y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~ 223 (254)
T KOG2630|consen 180 ----------------------KVESQS--------------YKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLV 223 (254)
T ss_pred ----------------------eehhHH--------------HHHHHHHhCCChhheEEeccChHHHHHHHhcccceeee
Confidence 111112 89999999999999999999999999999999999998
Q ss_pred CCCCCCcc
Q 018946 321 RSRCITTL 328 (348)
Q Consensus 321 ~~~~~~~~ 328 (348)
..+.+...
T Consensus 224 ~rPgna~l 231 (254)
T KOG2630|consen 224 SRPGNAPL 231 (254)
T ss_pred ecCCCCCC
Confidence 88777654
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00053 Score=69.80 Aligned_cols=125 Identities=10% Similarity=0.095 Sum_probs=70.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc---------CCcccchheeecchhhhhhhccc------cc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQ------FV 226 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l---------gl~~~f~~~i~~~~e~~~~~~~~------~v 226 (348)
.-|.+..+|+.||++|.++.++|| |.-..+..+++.+ .+.++||++|+.+.. ..+|.. +.
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K--P~FF~~~~pfr~vd 258 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK--PGFFTEGRPFREVD 258 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C--CHHHCT---EEEEE
T ss_pred CCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC--CcccCCCCceEEEE
Confidence 468999999999999999999999 4678888888854 356899998876531 122211 11
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-h
Q 018946 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 305 (348)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~ 305 (348)
...+...... .+..+++. .+|. ... +....+.+|....++++|||+. .
T Consensus 259 ~~~g~l~~~~---------------------~~~~l~~g-~vY~---gGn------~~~l~~ll~~~g~~VLY~GDhi~~ 307 (448)
T PF05761_consen 259 TETGKLKWGK---------------------YVGPLEKG-KVYS---GGN------WDQLHKLLGWRGKEVLYFGDHIYG 307 (448)
T ss_dssp TTTSSEECS------------------------SS--TC--EEE---E--------HHHHHHHCT--GGGEEEEESSTTT
T ss_pred CCCCcccccc---------------------ccccccCC-CEee---cCC------HHHHHHHHccCCCeEEEECCchhh
Confidence 1111100000 00000111 1111 001 5666788899999999999996 6
Q ss_pred hHHHHHHc-CCcEEEECC
Q 018946 306 GVAGAQRI-GMPCVVMRS 322 (348)
Q Consensus 306 Di~aA~~a-G~~~i~v~~ 322 (348)
||...+.. ||.|++|-.
T Consensus 308 Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 308 DILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp THHHHHHHH-SEEEEE-T
T ss_pred hhhhhccccceEEEEEeh
Confidence 98877777 999999864
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.004 Score=50.48 Aligned_cols=52 Identities=21% Similarity=0.233 Sum_probs=38.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhee
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i 211 (348)
..+.||+.++|+.|+++|+++.++||.+..........++.+|+.--.+.++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ 64 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII 64 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE
Confidence 3578999999999999999999999987555566677778899874444443
|
... |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00087 Score=58.74 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=42.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc-ccchheeecc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGN 214 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~-~~f~~~i~~~ 214 (348)
+.++||+.++|+.|++. ++++|+|++ ....+..+++.+++. .+|...+++.
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~---~~~yA~~vl~~ldp~~~~F~~ri~~r 108 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMG---TRAYAQAIAKLIDPDGKYFGDRIISR 108 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCC---cHHHHHHHHHHhCcCCCeeccEEEEe
Confidence 56899999999999965 999999996 578999999999998 4785454443
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0059 Score=56.45 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=31.3
Q ss_pred HHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
.+..++.+++ .+.+|++|||+.||+.+.+.+|+.+++
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 5677777765 677999999999999999999998653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=71.73 Aligned_cols=42 Identities=26% Similarity=0.523 Sum_probs=37.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
+++||+.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999998 35688999999999853
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0016 Score=62.66 Aligned_cols=45 Identities=13% Similarity=0.015 Sum_probs=32.1
Q ss_pred HHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCcEEEECCCCCCcc
Q 018946 283 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 283 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 328 (348)
.+.+.+.++- .+=.+|.+|||+||+.+.+.+..++|+ +++.....
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi-~~~~~~~~ 259 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL-PSPIADSL 259 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe-cCCCCCCc
Confidence 4445555443 244899999999999999999998666 55544433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0011 Score=72.90 Aligned_cols=113 Identities=15% Similarity=0.281 Sum_probs=74.0
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+.+|+.. + .++.+.+.... .++++
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~~--~-~v~~g~~l~~~--------------~~~el- 573 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGIDA--N-DFLLGADIEEL--------------SDEEL- 573 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCC--C-CeeecHhhhhC--------------CHHHH-
Confidence 6799999999999999999999999 46788999999999952 1 12233222110 00100
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
.+ + =+...++.. .||.+-.+|.+++ +.| +.+.|+||+.||..|.+.|.+...+
T Consensus 574 ---~~--------~--------~~~~~vfAr~~Pe~K~~iV~~lq----~~G---~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 574 ---AR--------E--------LRKYHIFARLTPMQKSRIIGLLK----KAG---HTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred ---HH--------H--------hhhCeEEEECCHHHHHHHHHHHH----hCC---CEEEEECCCcccHHHHHhCCEEEEe
Confidence 00 0 011112211 3666666664443 333 5789999999999999999988654
Q ss_pred E
Q 018946 320 M 320 (348)
Q Consensus 320 v 320 (348)
-
T Consensus 628 g 628 (867)
T TIGR01524 628 D 628 (867)
T ss_pred C
Confidence 3
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=70.39 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+++|+.+- +++++++.. |+....-.+++
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~~----~~~~~~l~~--------~~~~~~~~~~~-- 504 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGTN----IYTADVLLK--------GDNRDDLPSGE-- 504 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCC----CcCHHHhcC--------CcchhhCCHHH--
Confidence 6899999999999999999999999 467899999999999641 122222211 11000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
-+++. ++.++|.. .||.+..+|.+++ +. .+-+.|+||+.||..|.+.|.+...+
T Consensus 505 ----------~~~~~--------~~~~vfAr~~Pe~K~~iV~~lq----~~---G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 505 ----------LGEMV--------EDADGFAEVFPEHKYEIVEILQ----KR---GHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred ----------HHHHH--------HhCCEEEecCHHHHHHHHHHHH----hc---CCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 00111 01111111 3566656654433 33 35799999999999999999988554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0017 Score=71.72 Aligned_cols=112 Identities=15% Similarity=0.238 Sum_probs=74.8
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+++|+.. ..++++.+...- .++++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~---~~v~~G~el~~l--------------~~~el~ 609 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLDA---GEVLIGSDIETL--------------SDDELA 609 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCc---cCceeHHHHHhC--------------CHHHHH
Confidence 6899999999999999999999999 56789999999999952 123334333210 011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+. . ++..++.. .||.+..+|.+++ +.| +-+.|+||+.||..|.++|.+...+
T Consensus 610 ----~~--------~--------~~~~VfAr~sPe~K~~IV~~Lq----~~G---~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 610 ----NL--------A--------ERTTLFARLTPMHKERIVTLLK----REG---HVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred ----HH--------H--------hhCcEEEEcCHHHHHHHHHHHH----HCC---CEEEEECCCcchHHHHHhCCEEEEe
Confidence 00 0 11122211 3666666664443 333 5689999999999999999987554
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0036 Score=69.25 Aligned_cols=120 Identities=20% Similarity=0.272 Sum_probs=79.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch-heeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~-~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
-||+|++++.++.|+++|+++.++|+ .....+..+.+..|+..--. ..++.+.+... -.+++
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~--------------l~~~e 608 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELDA--------------LSDEE 608 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhhh--------------cCHHH
Confidence 47899999999999999999999999 57899999999999764322 22333333221 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
+... +- +-+ +|-. +|+-+..+|.+++ +.| .-+.|.||+.||..|.+.|.+..
T Consensus 609 l~~~---------------~~---~~~--VfARvsP~qK~~IV~~lq----~~g---~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 609 LAEL---------------VE---ELS--VFARVSPEQKARIVEALQ----KSG---HVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred HHHH---------------hh---hCc--EEEEcCHHHHHHHHHHHH----hCC---CEEEEeCCCchhHHHHHhcCccE
Confidence 1100 10 111 2222 4666766664433 334 67899999999999999999987
Q ss_pred EEECCC
Q 018946 318 VVMRSR 323 (348)
Q Consensus 318 i~v~~~ 323 (348)
.+..++
T Consensus 662 amg~~G 667 (917)
T COG0474 662 AMGGEG 667 (917)
T ss_pred EecccH
Confidence 666533
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0019 Score=71.39 Aligned_cols=112 Identities=14% Similarity=0.185 Sum_probs=74.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+.+|+.. ..++++.+...- .++++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~~---~~vi~G~el~~~--------------~~~el~ 609 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLEP---GEPLLGTEIEAM--------------DDAALA 609 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC---CCccchHhhhhC--------------CHHHHH
Confidence 6899999999999999999999999 56789999999999952 122333333210 011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+. =++..++.. +||-+-.+|.+++ +. -+-+.|+||+.||..|.+.|.+...+
T Consensus 610 ----~~----------------v~~~~VfAr~sPe~K~~iV~~Lq----~~---G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 610 ----RE----------------VEERTVFAKLTPLQKSRVLKALQ----AN---GHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred ----HH----------------hhhCCEEEEeCHHHHHHHHHHHH----hC---CCEEEEECCCchhHHHHHhCCEEEEe
Confidence 00 011122211 3666666664443 33 35789999999999999999987443
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.015 Score=50.99 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=30.4
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l 201 (348)
.+||+.++...+.++|+++..+|+.........+..+..+
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4789999999999999999999996433334455555554
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0066 Score=53.62 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=31.8
Q ss_pred HHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcc
Q 018946 286 GAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 286 a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~ 328 (348)
+.+...++ ++++|+. +-++.|+++|++++.+++++++..
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccc
Confidence 34677777 8999985 568888889999999999887643
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0035 Score=70.29 Aligned_cols=115 Identities=15% Similarity=0.211 Sum_probs=73.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc---------hheeecchhhhhhhcccccccccc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS---------KIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f---------~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..-. +..++++.+...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~------------ 710 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA------------ 710 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh------------
Confidence 7899999999999999999999999 4678899999999995311 112222222211
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
-.+++ -.++ .....++.. +|+.+-.+|.+++ +. .+.+.|+||+.||..|.
T Consensus 711 --l~~~~------------l~~~--------~~~~~V~ar~sP~~K~~iV~~lq----~~---g~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 711 --LSDEE------------VDDL--------KALCLVIARCAPQTKVKMIEALH----RR---KAFCAMTGDGVNDSPSL 761 (1053)
T ss_pred --cCHHH------------HHHH--------hhcCeEEEecCHHHHHHHHHHHH----hc---CCeeEEeCCCcchHHHH
Confidence 00000 0011 111122211 3555555554333 33 35689999999999999
Q ss_pred HHcCCcEEE
Q 018946 311 QRIGMPCVV 319 (348)
Q Consensus 311 ~~aG~~~i~ 319 (348)
+.|++...+
T Consensus 762 k~AdVGIAm 770 (1053)
T TIGR01523 762 KMANVGIAM 770 (1053)
T ss_pred HhCCccEec
Confidence 999987654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0041 Score=69.01 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=74.6
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+.+|+..--. .++.+.+...- .+++
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~~~-~vi~G~~~~~l--------------~~~e-- 638 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTFGG-LAMEGKEFRRL--------------VYEE-- 638 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCCCc-eEeeHHHhhhC--------------CHHH--
Confidence 7899999999999999999999999 46789999999999963211 22333332210 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
-+ ++ -++..++.. +||-+..+|.+++ +.| +-+.|+||+.||..|.++|.+...+
T Consensus 639 --l~--------~~--------i~~~~Vfar~sPe~K~~iV~~lq----~~g---~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 639 --MD--------PI--------LPKLRVLARSSPLDKQLLVLMLK----DMG---EVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred --HH--------HH--------hccCeEEEECCHHHHHHHHHHHH----HCC---CEEEEECCCCchHHHHHhCCcceec
Confidence 00 11 111222211 3666666664443 333 4789999999999999999887554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.012 Score=54.90 Aligned_cols=88 Identities=17% Similarity=0.334 Sum_probs=55.7
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCCCCC
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRP 164 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 164 (348)
++|+.|+|.|++|..++ +.|+. ..+.. ++. .-+...+......+.|
T Consensus 80 ~aVvlDlDETvLdNs~Y---qgy~v---~nnk~---f~p-------------------------e~Wd~wV~a~~sk~vp 125 (274)
T COG2503 80 KAVVLDLDETVLDNSAY---QGYQV---LNNKG---FTP-------------------------ETWDKWVQAKKSKAVP 125 (274)
T ss_pred ceEEEecchHhhcCccc---cchhh---hcCCC---CCc-------------------------cchHHHHhhcccccCc
Confidence 49999999999998875 22221 11221 111 1122222333457899
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCCCC-chHHHHHHHHcCCccc
Q 018946 165 GVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERI 206 (348)
Q Consensus 165 Gv~elL~~Lk~~Gi~vaIvTn~~~~~-~~~~~~il~~lgl~~~ 206 (348)
|+.||++..-++|..|..+||...+. ......-+.++|+...
T Consensus 126 GA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~ 168 (274)
T COG2503 126 GAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQV 168 (274)
T ss_pred cHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccc
Confidence 99999999999999999999975422 2223344556677543
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.025 Score=51.49 Aligned_cols=40 Identities=20% Similarity=0.393 Sum_probs=35.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
-.+|++.+||+.+.+ .+.|+|-|++ ...++..+++.+|+.
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTAa---~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSAT---SMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEecC---CHHHHHHHHHHhccc
Confidence 359999999999999 5999999996 578999999998864
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0086 Score=56.11 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=36.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 281 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 281 ~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
.+++.+++++|++++++++|||+.||+.+.+.+|..+++-+
T Consensus 199 ~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 239 (270)
T PRK10513 199 TGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN 239 (270)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC
Confidence 34899999999999999999999999999999999766543
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.023 Score=63.93 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=38.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+..|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 4678888999999994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0073 Score=56.27 Aligned_cols=42 Identities=7% Similarity=-0.045 Sum_probs=38.1
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
++.+++++|+++++|++|||+.||+.++..+|...|.+.+..
T Consensus 172 l~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 172 LQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 789999999999999999999999999999888888887643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0088 Score=66.84 Aligned_cols=41 Identities=27% Similarity=0.387 Sum_probs=37.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+++|++.+.|+.|+++|+++.++|+- ....+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd---~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGD---HPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCC---CHHHHHHHHHHcCCC
Confidence 78999999999999999999999994 567889999999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0042 Score=58.14 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
+++.+++++|++++++++|||+.||+.|.+.+|..+++-+
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N 233 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN 233 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence 4899999999999999999999999999999999866554
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.005 Score=57.73 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=15.9
Q ss_pred CCceEEEEecCCccccccc
Q 018946 82 PRDLAVLLEVDGVLVDAYR 100 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~ 100 (348)
|.+|.|+||+||||++...
T Consensus 1 m~~kli~~DlDGTLl~~~~ 19 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDH 19 (270)
T ss_pred CceEEEEEecCCcCcCCCC
Confidence 4578999999999998653
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=54.33 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=21.1
Q ss_pred HHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 168 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 168 elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+.|++++++|++++++|+. ....+..+++.+|++
T Consensus 26 ~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 26 ETLKLLTARGIHFVFATGR---HHVDVGQIRDNLEIK 59 (266)
T ss_pred HHHHHHHHCCCEEEEEcCC---ChHHHHHHHHhcCCC
Confidence 3556667777777777774 334455566666664
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.015 Score=63.00 Aligned_cols=42 Identities=31% Similarity=0.497 Sum_probs=38.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
+++||+...+..||+.|++++++|+ ..+..++++.+.+|++.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~ 764 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDN 764 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcce
Confidence 5799999999999999999999999 56889999999999654
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.055 Score=51.43 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=33.6
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
+.||+.++|+.|+++|++++++||............++.+|+...
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 578999999999999999999999542223344456677888643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.019 Score=61.69 Aligned_cols=121 Identities=18% Similarity=0.207 Sum_probs=75.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch---heeecchhhhhhhcccccccccccCCch
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~---~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
-||||++.+.++.|+++|++|..+|+ .....+..+.++.|+-..-+ ....++.+.-. =.+
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~--------------ls~ 645 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD--------------LSD 645 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCccccccccchhhhhc--------------CCH
Confidence 37899999999999999999999999 46789999999999743222 12222222110 001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc-CCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i-~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
++ ++-+ +..+.+ +--+|.-+-++|.+ +++. .+=+.|-||+.||-.|.+.|.+
T Consensus 646 ~~-------------~~~~-------~~~~~vFaR~~P~HK~kIVea----Lq~~---geivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 646 EE-------------LDDA-------VRRVLVFARAEPQHKLKIVEA----LQSR---GEVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred HH-------------HHHH-------hhcceEEEecCchhHHHHHHH----HHhc---CCEEEecCCCccchhhhhhccc
Confidence 11 1000 111111 01135556666633 3333 3568899999999999999988
Q ss_pred cEEEECCCC
Q 018946 316 PCVVMRSRC 324 (348)
Q Consensus 316 ~~i~v~~~~ 324 (348)
...+=.+|.
T Consensus 699 GIAMG~~GT 707 (972)
T KOG0202|consen 699 GIAMGISGT 707 (972)
T ss_pred ceeecCCcc
Confidence 765543443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0078 Score=56.07 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
+++.+++++|++++++++|||+.||+.++..+|+.+++-
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 388999999999999999999999999999999986664
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.027 Score=47.75 Aligned_cols=27 Identities=7% Similarity=0.047 Sum_probs=23.4
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYG 187 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~ 187 (348)
++.+++.+.|+.++++|+.++++|+..
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~ 50 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRN 50 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 367788899999999999999999863
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.12 Score=47.99 Aligned_cols=44 Identities=20% Similarity=0.294 Sum_probs=34.8
Q ss_pred hcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC
Q 018946 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (348)
Q Consensus 156 ~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl 203 (348)
.+....+.||+.+.|..|.+. ++-+|+|. |....++++...+|+
T Consensus 78 sE~sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 78 SELSAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred HHhhcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 344578999999999999887 55555555 368999999999988
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.028 Score=53.12 Aligned_cols=47 Identities=11% Similarity=-0.059 Sum_probs=39.4
Q ss_pred CchhhHHHHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 273 PESLDKIVAALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 273 ~~~~~~~~~~~~~a~~~lgv---~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
|..-.|.. +++.+++++|+ ++++++.|||+.||+.|.+.+|..+++-
T Consensus 183 ~~g~sKg~-al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 183 DASAGKDQ-AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred cCCCCHHH-HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 33444554 38999999999 9999999999999999999999876664
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.011 Score=55.74 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=15.8
Q ss_pred CCceEEEEecCCccccccc
Q 018946 82 PRDLAVLLEVDGVLVDAYR 100 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~ 100 (348)
..+++|++|+||||++...
T Consensus 5 ~~~~lI~~DlDGTLL~~~~ 23 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT 23 (271)
T ss_pred CCCeEEEEeCccCCcCCCC
Confidence 3567999999999998654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.012 Score=52.72 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
++.++++++++++++++|||+.+|+.++..+|+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 788899999999999999999999999999999865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.014 Score=52.87 Aligned_cols=47 Identities=15% Similarity=0.180 Sum_probs=38.7
Q ss_pred CchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 273 PESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 273 ~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
|....|.. +++.+++.+|++++++++|||+.||+.+.+.+|..+++=
T Consensus 182 ~~~vsK~~-ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 182 PKGVSKGS-AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp ETTSSHHH-HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred eCCCCHHH-HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence 33444444 378889999999999999999999999999999985543
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.0096 Score=54.89 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|++++++++|||+.||+.++..+|...+ +.+
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia-v~n 202 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV-VGN 202 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE-EcC
Confidence 789999999999999999999999999999997765 444
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.0055 Score=59.86 Aligned_cols=126 Identities=15% Similarity=0.116 Sum_probs=73.5
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc---CCcccchheeecchhhhhhhccccccccc-ccCCchhH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKG-ISSGVDEQ 238 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l---gl~~~f~~~i~~~~e~~~~~~~~~v~g~~-v~~~~~~~ 238 (348)
.|....+++.|+++|.++.++||+ +-..+...++.+ .+.++||++|+-.+.- .+|+ .+. ....-++.
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNS---PysFVd~GM~flvG~~WRdlFDVVIvqA~KP--~Fft----de~rPfR~~dek 312 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNS---PYSFVDKGMRFLVGDDWRDLFDVVIVQANKP--EFFT----DERRPFRKYDEK 312 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCC---chhhhhcCceeeeCccHHhhhheeEEecCCC--cccc----cccCcchhhccc
Confidence 456778999999999999999995 445555555543 4568899887644321 1111 110 00000000
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-Hc
Q 018946 239 ---LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RI 313 (348)
Q Consensus 239 ---~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~-~a 313 (348)
+. -.|...-+|++|| -+. .+...++--|+...+++++||+. +|+.... ++
T Consensus 313 ~~sl~--wdkv~klekgkiY----------y~G-------------~l~~flelt~WrG~~VlYFGDHlySDLad~tlkh 367 (510)
T KOG2470|consen 313 RGSLL--WDKVDKLEKGKIY----------YQG-------------NLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKH 367 (510)
T ss_pred ccchh--hhhhhhcccCcee----------eec-------------cHHHHHHHhccCCCeeEEecCcchhhhhhhHhhc
Confidence 00 0111222233332 111 04455566678889999999996 7988777 99
Q ss_pred CCcEEEECC
Q 018946 314 GMPCVVMRS 322 (348)
Q Consensus 314 G~~~i~v~~ 322 (348)
||.|-.+-.
T Consensus 368 gWRTgAII~ 376 (510)
T KOG2470|consen 368 GWRTGAIIP 376 (510)
T ss_pred ccccccchH
Confidence 998876654
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.056 Score=60.86 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=35.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+++|||.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCC
Confidence 6899999999999999999999999 4567778887778874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.087 Score=54.18 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=35.9
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecch-hhh-hhhcccccccc
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EVE-RSLYGQFVLGK 229 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~-e~~-~~~~~~~v~g~ 229 (348)
.++..+..| +++|+|. +++..++..++. +|.+.. +|.+ ++. .+.+++.+.|.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~V-----vGTEL~v~~~G~~TG~~~G~ 155 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADEV-----IGSELVVNRFGFATGFIRGT 155 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCceE-----EeeeEEEeeccEEEEEEecC
Confidence 556667788 9999998 588999999998 888753 2332 233 25566666554
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.34 Score=45.51 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=37.6
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhee
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i 211 (348)
+.||+.++|+.|+++|++++++||............++.+|+.--.+.++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ 67 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY 67 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe
Confidence 57899999999999999999999976544455566667788853333333
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.051 Score=51.09 Aligned_cols=63 Identities=30% Similarity=0.497 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
+..+.+.+.+..+.+|+|+.++++.|.++++|+.|+|+| ....+..+++..|.- +....++++
T Consensus 77 k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAG---lgdvI~~vL~q~~~~-~~Nv~VvSN 139 (246)
T PF05822_consen 77 KSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAG---LGDVIEEVLRQAGVF-HPNVKVVSN 139 (246)
T ss_dssp GGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEE---EHHHHHHHHHHTT---BTTEEEEEE
T ss_pred HHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCC---cHHHHHHHHHHcCCC-CCCeEEEee
Confidence 456777777777899999999999999999999999997 578899999987542 123334444
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.024 Score=52.92 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=36.3
Q ss_pred HHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~--p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
.+.+++++|++ .+++++|||+.||+.+.+.+|..+++-+.
T Consensus 181 i~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 181 ANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 78889999999 99999999999999999999998776553
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.049 Score=50.77 Aligned_cols=41 Identities=7% Similarity=-0.070 Sum_probs=36.4
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCcEEEECCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMRSR 323 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a-------G~~~i~v~~~ 323 (348)
++.++++++..++++++|||+.+|+.+++.+ |..+|.|..+
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 7888999999999999999999999999998 7778888533
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.029 Score=59.08 Aligned_cols=40 Identities=5% Similarity=0.006 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
+++.+++++|++++++++|||+.||+.|.+.+|..+++-+
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN 550 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN 550 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC
Confidence 3899999999999999999999999999999999755543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.19 Score=51.85 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.0
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl 203 (348)
+++|++.+.++.|++.|+++.++|+ .....+..+-+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 467888888888886
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.082 Score=55.75 Aligned_cols=34 Identities=9% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 168 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 168 elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+.|++++++|+.++|+|+. ....+..+++.+++.
T Consensus 332 eAI~kl~ekGi~~vIATGR---~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 332 KALKEALSRGVKVVIATGK---ARPAVIDILKMVDLA 365 (580)
T ss_pred HHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHhCcc
Confidence 4678888889999999985 445566777777764
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.24 Score=56.48 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=33.5
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl 203 (348)
++++|+.+.++.|+++|+++.++|+- ....+..+....|+
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD---~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGD---KQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCC---CHHHHHHHHHHhCC
Confidence 68999999999999999999999993 45666666666665
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.11 Score=52.54 Aligned_cols=42 Identities=12% Similarity=-0.068 Sum_probs=36.5
Q ss_pred HHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 283 LRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 283 ~~~a~~~l---gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
++.+++++ |+++++++++||+.||+.+...+|...|.+.+..
T Consensus 180 l~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 180 LAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred HHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 78888998 9999999999999999999999996666666543
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.62 Score=45.41 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=21.2
Q ss_pred cCCCCccCCCCCCCCCCCCCceEEEEecCCcccccc
Q 018946 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAY 99 (348)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~kaviFDvDGTL~d~~ 99 (348)
.++++.+|...+ ..++ ...-++.||+||||+...
T Consensus 17 r~~~~kf~~~~s-~~ss-~~~fgfafDIDGVL~RG~ 50 (389)
T KOG1618|consen 17 RPPMRKFISEIS-FESS-PPTFGFAFDIDGVLFRGH 50 (389)
T ss_pred CCchhhhhcccC-CCCC-CCceeEEEecccEEEecC
Confidence 455665654433 2233 334499999999998744
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.098 Score=45.11 Aligned_cols=48 Identities=19% Similarity=0.504 Sum_probs=37.5
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC-cccchhee
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 211 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl-~~~f~~~i 211 (348)
+.++||+.+||+.+.+. +.++|.|.+ ...+++.+++.+.. ..+|+.++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~---~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSA---SEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS----HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEee---hhhhhhHHHHhhhhhcccccccc
Confidence 55799999999999665 999999996 57899999999987 46665554
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.38 Score=50.68 Aligned_cols=140 Identities=16% Similarity=0.259 Sum_probs=88.6
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCCCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (348)
.+.||-|+||||+.++.+ -+++-..|.+ |+ .
T Consensus 530 ~kIVISDIDGTITKSDvL------Gh~lp~iGkD---WT----------------------------------------h 560 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVL------GHVLPMIGKD---WT----------------------------------------H 560 (738)
T ss_pred CcEEEecCCCceEhhhhh------hhhhhhhcCc---ch----------------------------------------h
Confidence 469999999999998876 4455555665 31 2
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc--cchheeecchhhhhhhcccccccccccCCchhHHHH
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~--~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~ 241 (348)
-||.+|...++++||++..+|+.........+..|..+..+. +.+..++ +..+++... +++
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPVi-------------LSPd~lf~A----l~R 623 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVI-------------LSPDSLFAA----LHR 623 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEE-------------eCCCcchHH----HHH
Confidence 377788889999999999999865555566677777665542 2222211 112222222 333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCc-EEEEecCHhhHHHHHHcCCc
Q 018946 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 242 ~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~-~i~VGDs~~Di~aA~~aG~~ 316 (348)
|-.. +||..- .||++.-+.+-+.-+.+- -.-||...+|+-+=+++|++
T Consensus 624 EVI~----------------RkPe~F-----------KIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 624 EVIE----------------RKPEVF-----------KIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHH----------------cCchhh-----------hHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCC
Confidence 3322 233322 356677777777722222 34578899999999999995
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.3 Score=45.99 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=39.9
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
+.||+.++|+.|+++|++++++||.+..........++.+|++--.+.++.++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 57899999999999999999999975433345777788899874344444333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.40 E-value=1.3 Score=38.88 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=32.5
Q ss_pred CCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcc
Q 018946 292 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 292 v~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~ 328 (348)
..+++++||||.. .||..|...|...||...+.....
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 6789999999985 799999999999999998776544
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.11 Score=48.34 Aligned_cols=36 Identities=6% Similarity=-0.052 Sum_probs=30.9
Q ss_pred HHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~ 322 (348)
++.++++ +++++.||| +.||+.|.+.+|...+.|.+
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 6666666 699999999 89999999999998888873
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.29 Score=49.72 Aligned_cols=107 Identities=11% Similarity=0.118 Sum_probs=76.6
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHH
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~ 243 (348)
-...++.+.+...|.+|.++|.-=- +..+++.++...|.+-.--.+..+++....
T Consensus 102 ~~~~eL~e~ai~n~krVIlISDMYl-ps~Il~~~L~s~g~d~~nipiY~S~e~rl~------------------------ 156 (635)
T COG5610 102 KKNIELVEEAIKNEKRVILISDMYL-PSSILRTFLNSFGPDFNNIPIYMSSEFRLK------------------------ 156 (635)
T ss_pred ccchHHHHHHHhCCCeEEEEecccC-cHHHHHHHHHhcCCCccCceeeecceeehh------------------------
Confidence 3467899999999999999996432 457788888888876432222223322211
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECC
Q 018946 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 244 ~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~ 322 (348)
|-+-++ |.++++.-+++|.+.+++||.. .|+..+.+.|+.|...-+
T Consensus 157 -------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s 203 (635)
T COG5610 157 -------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFYIS 203 (635)
T ss_pred -------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHHHH
Confidence 344444 9999999999999999999965 699999999998876544
Q ss_pred CCCCcc
Q 018946 323 RCITTL 328 (348)
Q Consensus 323 ~~~~~~ 328 (348)
...+.+
T Consensus 204 ~l~~~e 209 (635)
T COG5610 204 QLLPYE 209 (635)
T ss_pred HhhhHh
Confidence 333333
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.28 Score=50.62 Aligned_cols=44 Identities=16% Similarity=0.382 Sum_probs=37.5
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
..||++|=+.+||+-|++.+.||+ ..+-.+..+....|+++|..
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfiA 491 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFIA 491 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhhh
Confidence 468999999999999999999998 35677788888999988654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.47 Score=38.27 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=20.2
Q ss_pred EEEecCCcccccccc-ChHHHHHHHHHHcCCCC
Q 018946 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (348)
Q Consensus 87 viFDvDGTL~d~~~~-~~~~a~~~~~~~~gl~~ 118 (348)
++||+||||+..... .....+-+.+++.|.+.
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE
Confidence 689999999985433 12234445555667653
|
... |
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.59 Score=44.14 Aligned_cols=54 Identities=31% Similarity=0.492 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSE 204 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~ 204 (348)
++..+++++...+.++.|+.++.+.|+++++|+.|.|.| .-..++.++.. .++.
T Consensus 125 k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAG---igdiiEev~~q~~~~~ 179 (298)
T KOG3128|consen 125 KNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAG---IGDIIEEVTRQKLVLH 179 (298)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecc---hHHHHHHHHHHHhccC
Confidence 677888888777889999999999999999999999997 44556665554 4443
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=89.38 E-value=0.15 Score=50.63 Aligned_cols=26 Identities=31% Similarity=0.488 Sum_probs=21.0
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAY 186 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~ 186 (348)
.+.|.+..=|..+.+.||.++|.||.
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecc
Confidence 35666677788899999999999974
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.14 E-value=13 Score=37.18 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
|+++.+++|- .-.-++|||+...-.+|++..|++.-+..
T Consensus 414 FerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 414 FERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 9999999997 45678899999999999999999988764
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=88.58 E-value=6.1 Score=37.54 Aligned_cols=33 Identities=6% Similarity=-0.001 Sum_probs=27.1
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 288 EYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 288 ~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
+.++-. ||++|....++.|. .+.+++.|+.+..
T Consensus 230 ~~~~ph----IFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 230 KAFRPH----IFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred HhhCCC----EeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 455544 99999999999998 8999999988754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=88.55 E-value=0.36 Score=45.17 Aligned_cols=32 Identities=3% Similarity=-0.163 Sum_probs=29.3
Q ss_pred CCCcEEEEec----CHhhHHHHHHcCCcEEEECCCC
Q 018946 293 PVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 293 ~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~~ 324 (348)
+++++++||| +.||+++.+.-|..++-|.++.
T Consensus 199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 8999999999 7999999999999999998643
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.10 E-value=0.51 Score=40.84 Aligned_cols=117 Identities=17% Similarity=0.248 Sum_probs=67.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCC---CCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcC
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA---NWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASK 158 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (348)
|..+.+..|||-||.|...- |...++ +.+..++... .|+-. .+.....+....+.. +..+ .+
T Consensus 1 m~kk~iaIDmD~vLadll~e-wv~~~N-~y~D~~lk~~di~gwdik---~yv~~~~g~i~~il~-----ep~f---FR-- 65 (180)
T COG4502 1 MNKKTIAIDMDTVLADLLRE-WVKRYN-IYKDKLLKMSDIKGWDIK---NYVKPECGKIYDILK-----EPHF---FR-- 65 (180)
T ss_pred CCCceEEeeHHHHHHHHHHH-HHHHhh-hccccCcChHhhcccchh---hccCccCCeeeeecc-----Ccch---hh--
Confidence 45678999999999997654 556666 4444555410 12111 111111110000000 0011 11
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCC---CCCchHHHHHHHHcCCcccchheeecc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG---KSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~---~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
.+...|++++.+++|-.. +.|.|+|.+. ++...-.+-+.+.+++-.+..+++++.
T Consensus 66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn 123 (180)
T COG4502 66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN 123 (180)
T ss_pred hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC
Confidence 256789999999999887 9999999762 334455566667777766666655444
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.72 E-value=2 Score=46.95 Aligned_cols=42 Identities=26% Similarity=0.442 Sum_probs=35.9
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
-|.+|||++.++.|+.+|+.|-.+|+ +.-..++.+..+-|+.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHcccc
Confidence 36899999999999999999999998 3456778888887774
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.04 E-value=3.4 Score=35.14 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=47.5
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCC
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~ 234 (348)
...+++++..|.+|++.|+.++++|++. ...++..+|+.+.+...+-.. .....|+-+.-|+++.-|
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~--ap~iA~q~L~~fkvk~~Gvlk------ps~e~ft~~~~g~gsklg 109 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTM--APQIASQGLETFKVKQTGVLK------PSLEEFTFEAVGDGSKLG 109 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHhccCcccccc------hhhhcCceeeecCcccch
Confidence 3468899999999999999999999985 478889999988775433221 111224455556666544
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.60 E-value=1.1 Score=48.76 Aligned_cols=154 Identities=16% Similarity=0.216 Sum_probs=85.6
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhh--hh----hhccccccccccc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV--ER----SLYGQFVLGKGIS 232 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~--~~----~~~~~~v~g~~v~ 232 (348)
.+|+.|++++.|+.|.+.+++++.+|+ ...-.+.++.+.+|+-+-.-.++.-.++. .+ +.-+.++.. ..
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITG---DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp--~~ 747 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITG---DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLP--LK 747 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeC---CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeec--CC
Confidence 378999999999999999999999998 34566677777777643211111100000 00 000000000 00
Q ss_pred CCchhH-HHHHHHHHHHHH--HHHHHHHHHhhcCCCCccCCC-CCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 233 SGVDEQ-LATEARKAVSAQ--KQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 233 ~~~~~~-~~~~~~k~~~~~--~~~i~~~~~~~~KP~p~i~~~-~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
.+.... ++.+.+=-.+++ -+=++.+...+.-|+..+|.. .|+-++.+|..| +.+| .-++|.||+.||+-
T Consensus 748 p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tl----K~~G---y~TLMCGDGTNDVG 820 (1160)
T KOG0209|consen 748 PGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTL----KKLG---YVTLMCGDGTNDVG 820 (1160)
T ss_pred CCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHH----HhcC---eEEEEecCCCcchh
Confidence 000000 000000000000 001122333445677777655 477777776444 4555 46899999999999
Q ss_pred HHHHcCCcEEEECCCC
Q 018946 309 GAQRIGMPCVVMRSRC 324 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~ 324 (348)
|.+.|...+.+++...
T Consensus 821 ALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 821 ALKQAHVGVALLNNPE 836 (1160)
T ss_pred hhhhcccceehhcCCh
Confidence 9999999999888765
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.41 E-value=2.4 Score=40.56 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=25.9
Q ss_pred CCCceEEEEecCCcccccccc-ChHHHHHHHHHHcCCCC
Q 018946 81 PPRDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~-~~~~a~~~~~~~~gl~~ 118 (348)
...+++++||+||||+..... ..-..+-+.+++.|++.
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~ 43 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV 43 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE
Confidence 346789999999999986543 12234455566777765
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.07 E-value=8.1 Score=37.46 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=34.8
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
-.+.||+.++++.|++.|..+.++||-++...+..-..++++|+..
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~ 82 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS 82 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence 3578999999999999999999999855433444444555677765
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=84.88 E-value=0.47 Score=41.02 Aligned_cols=15 Identities=47% Similarity=0.698 Sum_probs=13.2
Q ss_pred ceEEEEecCCccccc
Q 018946 84 DLAVLLEVDGVLVDA 98 (348)
Q Consensus 84 ~kaviFDvDGTL~d~ 98 (348)
+++|+||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999983
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=84.48 E-value=1.8 Score=46.87 Aligned_cols=44 Identities=16% Similarity=0.074 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC--CcEEEECC
Q 018946 276 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG--MPCVVMRS 322 (348)
Q Consensus 276 ~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG--~~~i~v~~ 322 (348)
..|+.+ .+.+++ +++++.++++||+.||+.+.+.++ ..+|.|..
T Consensus 656 vnKG~a-l~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~ 701 (726)
T PRK14501 656 VNKGRA-VRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP 701 (726)
T ss_pred CCHHHH-HHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC
Confidence 344433 555566 778899999999999999999874 34555554
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.70 E-value=0.58 Score=41.67 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.5
Q ss_pred CceEEEEecCCccccc
Q 018946 83 RDLAVLLEVDGVLVDA 98 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~ 98 (348)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4889999999999986
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=82.98 E-value=1.3 Score=41.48 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=13.2
Q ss_pred ceEEE-EecCCccccccc
Q 018946 84 DLAVL-LEVDGVLVDAYR 100 (348)
Q Consensus 84 ~kavi-FDvDGTL~d~~~ 100 (348)
+++++ ||+||||++...
T Consensus 6 ~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK 23 (245)
T ss_pred cceEEEEeccCCCcCCCC
Confidence 45555 999999998764
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=82.84 E-value=2 Score=40.50 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=33.6
Q ss_pred CcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 164 pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
|++.++|+.|+++|++++++|+. +...+..+++.+|+..+
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR---~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSK---TAAEVEVLRKELGLEDP 63 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHcCCCCC
Confidence 45667899999999999999995 56778889999998754
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.17 E-value=0.7 Score=40.66 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=15.5
Q ss_pred CCCceEEEEecCCccccc
Q 018946 81 PPRDLAVLLEVDGVLVDA 98 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~ 98 (348)
....|.+|||+||||+|.
T Consensus 5 a~~IkLli~DVDGvLTDG 22 (170)
T COG1778 5 AKNIKLLILDVDGVLTDG 22 (170)
T ss_pred hhhceEEEEeccceeecC
Confidence 356789999999999995
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 17/152 (11%)
Query: 80 NPPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDL 129
+ PR + A + ++DG+L+D+ +A LG+D + + DL
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLW-DRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL 62
Query: 130 LRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS 189
R A L + PL PGV + V +G+ + + +A S
Sbjct: 63 WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASA---S 119
Query: 190 GDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
+ V+ + + E++ S
Sbjct: 120 PLHMLEKVLTMFDLRDSFD--ALASAEKLPYS 149
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-09
Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 23/155 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL-----DCANWTAPIYTDLLRKSAGDE--- 137
A++L+ G +D AF F++ G+ + ++ +R+ G+
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIA 75
Query: 138 ------------DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTA 185
+ + ++ + + ++ + L PG ++ D +GI + T
Sbjct: 76 NAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTG 135
Query: 186 YGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
YG + + + + V +V R
Sbjct: 136 YGP---GMMAPALIAAKEQGYTPASTVFATDVVRG 167
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 9e-08
Identities = 16/151 (10%), Positives = 49/151 (32%), Gaps = 29/151 (19%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ ++DGVL D ++ + G+ + + + ++
Sbjct: 7 AIIFDMDGVLFDTEKYY-YDRRASFLGQKGIS---IDHLPPSFFIGGNTKQVWENILRDE 62
Query: 146 NRKNALDEFLASKDA-----------PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA 194
K + + + P V +++ ++G+ + + ++ S
Sbjct: 63 YDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASS---SVKADI 119
Query: 195 RSVVEKLGSERISKIK-----IVGNEEVERS 220
+E+ ++ ++ EE + S
Sbjct: 120 FRALEENR------LQGFFDIVLSGEEFKES 144
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 23/155 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL-----DCANWTAPIYTDLLRKSAGDE--- 137
AV+ G VD F + F F K G+ + + D +R
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67
Query: 138 ------------DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTA 185
+ + + + + + A GV++ + GI + T
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 186 YGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
Y + V ++ + +V ++V
Sbjct: 128 Y---TREMMDIVAKEAALQGYKPDFLVTPDDVPAG 159
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 24/164 (14%)
Query: 75 GHDSQNPPRDL-------AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW------ 121
H S PR AVL ++DGVL ++ + + +A++ + GLD +
Sbjct: 8 HHSSGLVPRGSHMRKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDLSREEAYMHE 66
Query: 122 ---TAPIYTDLLRKSAGDE--DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNE 176
A + ++ G E + ++ K+ L F + +A PG + + +E
Sbjct: 67 GRTGASTINIVFQRELGKEATQEEIESIYHEKSIL--FNSYPEAERMPGAWELLQKVKSE 124
Query: 177 GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
G+ +V+T SG +E K +V +V+
Sbjct: 125 GLTPMVVTG---SGQLSLLERLEHNFPGMFHKELMVTAFDVKYG 165
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 4e-07
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 25/150 (16%)
Query: 86 AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV 142
AVL ++DGVL D + ++++ ++ G + ++ ++
Sbjct: 25 AVLFDMDGVLFDSMPNHA----ESWHKIMKRFGFG---LSREEAYMHEGRTGASTINIVS 77
Query: 143 LFFNRKNALDEFLASK------------DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG 190
+A +E + + A PG + + +EG+ +V+T SG
Sbjct: 78 RRERGHDATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTG---SG 134
Query: 191 DRIARSVVEKLGSERISKIKIVGNEEVERS 220
+ +V +V+
Sbjct: 135 QTSLLDRLNHNFPGIFQANLMVTAFDVKYG 164
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 81 PPRDL-AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD 136
PP+ + ++ ++DG+L+D Y F + ++ + + ++ K A +
Sbjct: 26 PPQPVTHLIFDMDGLLLDTERLYS----VVFQEICNRYDKK---YSWDVKSLVMGKKALE 78
Query: 137 EDRMLVLFFNRKNALDEFLASKD---------APLRPGVEDFVDDAYNEGIPLIVLTAYG 187
++++ + +E + A L PG E + GIP + T+
Sbjct: 79 AAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATS-- 136
Query: 188 KSGDRIARSVVEKLGS--ERISKIKIVGNEEVERS 220
S + S I + + EV+
Sbjct: 137 -SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-07
Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 18/146 (12%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGD 136
+ + ++DG L D+ N A+ A + A W + L R++
Sbjct: 8 SFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMS 66
Query: 137 -EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR 195
D + E L + L PG + ++ E + + T+ G A
Sbjct: 67 ITDEQAERLSEKHAQAYERLQHQIIAL-PGAVELLETLDKENLKWCIATS---GGIDTAT 122
Query: 196 SVVEKLG-SERISKIKIVGNEEVERS 220
++ L IV ++V
Sbjct: 123 INLKALKLDINKI--NIVTRDDVSYG 146
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 7e-06
Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGL---DCANWTAPIYTDLLRKSAGDE-DRM 140
AV+ + L+D + R F ++G D + L G
Sbjct: 27 AVIFDWYNTLIDTSINID-RTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA 85
Query: 141 LVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200
+L+ N +L++ S + L G + +D I + +++ K+G+R RS +
Sbjct: 86 TILYEN---SLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVS--NKNGER-LRSEIHH 139
Query: 201 LGSERISKIKIVGNEEVERS 220
I+G+ +
Sbjct: 140 KNLTHYFDS-IIGSGDTGTI 158
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 29/153 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ ++DGV+ D + A+ +++ + + + L S + +++F
Sbjct: 4 AVIFDLDGVITDTAEYH-FLAWKHIAEQIDIP---FDRDMNERLKGISREESLESILIFG 59
Query: 146 N---------------RKNALDEFLASKDAP--LRPGVEDFVDDAYNEGIPLIVLTAYGK 188
RKN + L SK P L PG+ + NE I + + ++
Sbjct: 60 GAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS--- 116
Query: 189 SGDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
R A ++ +L + IV + +
Sbjct: 117 --SRNAPKILRRLAIIDDFH--AIVDPTTLAKG 145
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 29/153 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
V+ ++DGV+ D QA+ ++G+ A L S + R ++
Sbjct: 7 GVIFDLDGVITDTAHLH-FQAWQQIAAEIGIS---IDAQFNESLKGISRDESLRRILQHG 62
Query: 146 N---------------RKNAL--DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGK 188
RKN L + PG+ + D + I + + +
Sbjct: 63 GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV--- 119
Query: 189 SGDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
S A +++ L E + +++ S
Sbjct: 120 S--LNAPTILAALELREFFT--FCADASQLKNS 148
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 22/149 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD---------LLRKSAGD 136
AVL ++DGV+ D + +A+ +++G++ + + A
Sbjct: 4 AVLFDLDGVITDTAEYH-FRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 62
Query: 137 E--DRMLVLFFNRKNA--LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR 192
+ RKN + A + PG+ + D + I + + +A S +
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA---S--K 117
Query: 193 IARSVVEKLG-SERISKIKIVGNEEVERS 220
++E++ + I EV S
Sbjct: 118 NGPFLLERMNLTGYFD--AIADPAEVAAS 144
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 27/172 (15%)
Query: 63 HVNPFSAFSSSSGHDSQNPPRDL---AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGL 116
++ A + P L A L +VDG ++ A + +
Sbjct: 11 YIRTTKANIQTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI----AAFWRDFGKDKPY 66
Query: 117 DCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFV 170
+ D D + N+ + + PG
Sbjct: 67 F---DAEHVIHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLC 123
Query: 171 DDAYNEGI-PLIVLTAYGKSGDR-IARSVVEKLGSERISKIKIVGNEEVERS 220
+ V T SG R +A+ + L +R + +V++
Sbjct: 124 NALNALPKEKWAVAT----SGTRDMAKKWFDILKIKRPE--YFITANDVKQG 169
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 3e-05
Identities = 42/300 (14%), Positives = 92/300 (30%), Gaps = 80/300 (26%)
Query: 10 LLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPFSA 69
L++ ++ Y Q +L N N F ++ + + Y + L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--QVFAKYNVSRLQPYLKLRQALL------ 145
Query: 70 FSSSSGHDSQNPPRDLAVLLEVDG-------VLV----DAYRFGNRQAFNVAFQKLG-LD 117
P +++ + DG + +Y+ + F + + L +
Sbjct: 146 --------ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 118 CANWTAPIYTDLLRKSAGD----EDRMLVLFFNR---KNALDEFLASKDAP-----LRPG 165
+ LL + + D + + L L SK L
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-N 252
Query: 166 VEDF-VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224
V++ +A+N +++ T + + V + L + + I + + +L
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHISL---DHHSMTLT-- 299
Query: 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 284
DE + K + + Q++ EV T++P L I ++R
Sbjct: 300 ----------PDEVKSLLL-KYLDCRPQDLPREV----------LTTNPRRLSIIAESIR 338
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 9e-04
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 24/129 (18%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGLDCANWTA------PIYTDLLRKSAGDE- 137
A + ++DG L+D + F + + DLL + A D
Sbjct: 6 AFIWDLDGTLLDSYEAILS--GIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRN 63
Query: 138 --DRMLVLFFNRKNALDEFLASKDAPLR--PGVEDFVDDAYNEGIPLIVLTAYGKSGDRI 193
+L + LA K+A + PG + + A GI + T K
Sbjct: 64 LDVEVLNQVR------AQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYT--HKG--NN 113
Query: 194 ARSVVEKLG 202
A ++++ LG
Sbjct: 114 AFTILKDLG 122
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 348 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.95 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.93 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.93 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.93 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.92 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.92 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.92 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.91 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.91 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.91 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.91 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.91 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.91 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.91 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.91 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.91 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.9 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.89 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.89 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.89 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.89 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.89 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.89 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.89 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.89 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.89 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.88 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.88 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.88 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.88 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.88 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.88 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.88 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.88 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.87 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.87 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.87 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.87 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.87 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.87 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.87 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.87 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.87 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.86 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.86 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.85 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.85 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.85 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.85 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.85 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.85 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.84 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.84 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.84 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.84 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.84 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.82 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.82 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.81 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.81 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.8 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.8 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.77 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.76 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.76 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.76 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.75 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.75 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.75 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.75 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.74 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.74 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.73 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.73 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.72 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.72 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.7 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.7 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.67 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.65 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.63 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.63 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.62 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.61 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.6 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.6 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.6 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.6 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.6 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.59 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.59 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.59 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.58 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.58 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.57 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.57 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.57 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.56 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.56 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.55 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.51 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.18 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.41 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.4 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.39 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.35 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.32 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.26 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.2 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.19 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.18 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.1 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.09 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.02 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.02 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.97 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.88 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.87 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.86 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.85 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.85 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.82 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.81 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.81 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.81 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.8 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.67 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.63 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.61 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.54 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.5 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.44 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.33 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.31 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.01 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.99 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.88 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.79 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.56 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.48 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.23 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.23 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.22 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 96.95 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.93 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.92 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.8 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.74 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.66 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.47 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 96.45 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.09 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.86 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 95.59 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.14 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.6 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 93.76 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.53 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.16 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.92 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 90.25 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 90.09 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 89.88 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 88.43 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 84.43 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 82.59 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 82.52 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 82.34 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 82.07 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 80.8 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=227.14 Aligned_cols=199 Identities=17% Similarity=0.214 Sum_probs=151.4
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-----------HHHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----------KNALD 152 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~ 152 (348)
+||||||+||||+|+... +..+|+++++++|++ ++++.+..+.+................ ...+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKP---YTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKK 76 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCC---CCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHH
Confidence 479999999999999887 889999999999997 777777766654422211111111100 11111
Q ss_pred HHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 153 ~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
.... ....++||+.++++.|+++|++++++||+ ....+...++.+|+.++|+.++.+. ++.
T Consensus 77 ~~~~-~~~~~~pg~~~~l~~L~~~g~~~~i~tn~---~~~~~~~~l~~~~l~~~fd~~~~~~-~~~-------------- 137 (216)
T 3kbb_A 77 RVFS-ELLKENPGVREALEFVKSKRIKLALATST---PQREALERLRRLDLEKYFDVMVFGD-QVK-------------- 137 (216)
T ss_dssp HHHH-HHCCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECGG-GSS--------------
T ss_pred HHHH-HhcccCccHHHHHHHHHHcCCCcccccCC---cHHHHHHHHHhcCCCcccccccccc-ccC--------------
Confidence 2111 23578999999999999999999999995 6788999999999999999775433 221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |+.+++++|++|++|+||||+.+||.+|++
T Consensus 138 ----------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~ 175 (216)
T 3kbb_A 138 ----------------------------NGKPDPEI--------------YLLVLERLNVVPEKVVVFEDSKSGVEAAKS 175 (216)
T ss_dssp ----------------------------SCTTSTHH--------------HHHHHHHHTCCGGGEEEEECSHHHHHHHHH
T ss_pred ----------------------------CCcccHHH--------------HHHHHHhhCCCccceEEEecCHHHHHHHHH
Confidence 23999999 999999999999999999999999999999
Q ss_pred cCCcEEE-ECCCCCCcccccccc--c--chhHHHHhhccc
Q 018946 313 IGMPCVV-MRSRCITTLPVSKTQ--R--LADMLCRILKSI 347 (348)
Q Consensus 313 aG~~~i~-v~~~~~~~~~l~~~~--~--~~d~l~~~l~~i 347 (348)
+||++|+ +.++.+..+.+.... . -++++++.|.+|
T Consensus 176 aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~eL 215 (216)
T 3kbb_A 176 AGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEV 215 (216)
T ss_dssp TTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHHH
T ss_pred cCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHHH
Confidence 9999985 888877766654432 1 267888888765
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=230.64 Aligned_cols=184 Identities=16% Similarity=0.204 Sum_probs=135.9
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH----------------HHHHHHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----------------DRMLVLF 144 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~----------------~~~~~~~ 144 (348)
.|.+|+||||+||||+|+... +..+|+++++++|++ ++.+.+..+.+...... .......
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGIS---IDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLA 77 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHH
T ss_pred CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHH
Confidence 477899999999999999887 889999999999997 33332222222211111 1111111
Q ss_pred hhHHHHHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcc
Q 018946 145 FNRKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (348)
Q Consensus 145 ~~~~~~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~ 223 (348)
......+.+.+.. ....++||+.++++.|+++|++++++||+ .....+++.+|+.++|+.++. ++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~-----~~~~~~l~~~gl~~~fd~i~~-~~~~~----- 146 (243)
T 4g9b_A 78 YRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVS-----LNAPTILAALELREFFTFCAD-ASQLK----- 146 (243)
T ss_dssp HHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECC-GGGCS-----
T ss_pred HHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccc-----cchhhhhhhhhhccccccccc-ccccc-----
Confidence 1111223333322 23457999999999999999999999995 345778999999999987643 33322
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC
Q 018946 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (348)
Q Consensus 224 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs 303 (348)
.+||+|++ |+.+++++|++|++|+||||+
T Consensus 147 -------------------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~VgDs 175 (243)
T 4g9b_A 147 -------------------------------------NSKPDPEI--------------FLAACAGLGVPPQACIGIEDA 175 (243)
T ss_dssp -------------------------------------SCTTSTHH--------------HHHHHHHHTSCGGGEEEEESS
T ss_pred -------------------------------------CCCCcHHH--------------HHHHHHHcCCChHHEEEEcCC
Confidence 13999999 999999999999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCCCCcccc
Q 018946 304 QSGVAGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 304 ~~Di~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
.+||.+|+++||++|+|.++....+.+
T Consensus 176 ~~di~aA~~aG~~~I~V~~g~~~ad~~ 202 (243)
T 4g9b_A 176 QAGIDAINASGMRSVGIGAGLTGAQLL 202 (243)
T ss_dssp HHHHHHHHHHTCEEEEESTTCCSCSEE
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHh
Confidence 999999999999999999987665543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-28 Score=222.25 Aligned_cols=175 Identities=18% Similarity=0.226 Sum_probs=127.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc----------------HHHHHHHHhh
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD----------------EDRMLVLFFN 146 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~----------------~~~~~~~~~~ 146 (348)
++|+||||+||||+|+... +..+|+++++++|++. +.+.+..+.+..... ..........
T Consensus 25 MIKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGIDI---DTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEE 100 (250)
T ss_dssp CCCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCCC---CTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHH
T ss_pred hhheeeecCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHH
Confidence 4799999999999999887 8899999999999973 322222222211110 0111100000
Q ss_pred HHHHHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccc
Q 018946 147 RKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 147 ~~~~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
....+..+... ...+++||+.++++.|+++|+++++.|+. ..+..+++.+|+.++|+.++. ++++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-----~~~~~~L~~~gl~~~Fd~i~~-~~~~~------- 167 (250)
T 4gib_A 101 KNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS-----KNAINVLNHLGISDKFDFIAD-AGKCK------- 167 (250)
T ss_dssp HHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHHTCGGGCSEECC-GGGCC-------
T ss_pred HHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc-----chhhhHhhhcccccccceeec-ccccC-------
Confidence 12233333322 23467999999999999999999998874 345678999999999987643 33322
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
..||+|++ |+.+++++|++|++|+||||+.+
T Consensus 168 -----------------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~VGDs~~ 198 (250)
T 4gib_A 168 -----------------------------------NNKPHPEI--------------FLMSAKGLNVNPQNCIGIEDASA 198 (250)
T ss_dssp -----------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHH
T ss_pred -----------------------------------CCCCcHHH--------------HHHHHHHhCCChHHeEEECCCHH
Confidence 13999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCC
Q 018946 306 GVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~ 323 (348)
||.+|+++||.+|+|.+.
T Consensus 199 Di~aA~~aG~~~i~v~~~ 216 (250)
T 4gib_A 199 GIDAINSANMFSVGVGNY 216 (250)
T ss_dssp HHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHcCCEEEEECCh
Confidence 999999999999999754
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=205.40 Aligned_cols=180 Identities=14% Similarity=0.218 Sum_probs=133.4
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH------HHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR------KNALDEFL 155 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~ 155 (348)
|.+|+|+||+||||+|+... +..+|.++++++|++. .+.+.+....+.. ........+.. .+.+.+.+
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFMGPP---LESSFATCLSKDQISEAVQIYRSYY 75 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTSSSC---HHHHHHTTSCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHcCcc---HHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 45789999999999999876 7889999999999863 3344443333321 11111100000 11222222
Q ss_pred hc---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 156 AS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 156 ~~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
.. ...+++||+.++|+.|++ |++++|+||+ ....++..++++|+..+|+.++.+. .
T Consensus 76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~---~~~~~~~~l~~~gl~~~f~~i~~~~--~--------------- 134 (210)
T 2ah5_A 76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTK---DTSTAQDMAKNLEIHHFFDGIYGSS--P--------------- 134 (210)
T ss_dssp HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEEC--S---------------
T ss_pred HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCC---CHHHHHHHHHhcCchhheeeeecCC--C---------------
Confidence 21 135689999999999999 9999999995 5667888999999999998764322 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|++
T Consensus 135 ----------------------------~~Kp~p~~--------------~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~ 172 (210)
T 2ah5_A 135 ----------------------------EAPHKADV--------------IHQALQTHQLAPEQAIIIGDTKFDMLGARE 172 (210)
T ss_dssp ----------------------------SCCSHHHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred ----------------------------CCCCChHH--------------HHHHHHHcCCCcccEEEECCCHHHHHHHHH
Confidence 12999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCCCcccc
Q 018946 313 IGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 313 aG~~~i~v~~~~~~~~~l 330 (348)
+||++|++.++.....++
T Consensus 173 aG~~~i~v~~~~~~~~~l 190 (210)
T 2ah5_A 173 TGIQKLAITWGFGEQADL 190 (210)
T ss_dssp HTCEEEEESSSSSCHHHH
T ss_pred CCCcEEEEcCCCCCHHHH
Confidence 999999999876544443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=194.40 Aligned_cols=182 Identities=12% Similarity=0.135 Sum_probs=134.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-------HHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------KNALDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~ 154 (348)
|++|+|+||+||||+++... +..++.++++++|++. ....+....+................ ...+.++
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGISI---DHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTY 78 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCC---TTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHH
T ss_pred ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCCC---CHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 45899999999999999876 7889999999999863 33333333333222111111111100 1223333
Q ss_pred HhcC----CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 155 LASK----DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 155 ~~~~----~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
.... ...++||+.++|+.|+++|++++++||+ ....++..++.+|+..+|+.++.+. ++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~------------ 142 (214)
T 3e58_A 79 KQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSS---VKADIFRALEENRLQGFFDIVLSGE-EFK------------ 142 (214)
T ss_dssp HHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGG-GCS------------
T ss_pred HHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCC---cHHHHHHHHHHcCcHhheeeEeecc-ccc------------
Confidence 3221 2357999999999999999999999995 5688999999999999998764332 211
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|
T Consensus 143 ------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a 178 (214)
T 3e58_A 143 ------------------------------ESKPNPEI--------------YLTALKQLNVQASRALIIEDSEKGIAAG 178 (214)
T ss_dssp ------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred ------------------------------CCCCChHH--------------HHHHHHHcCCChHHeEEEeccHhhHHHH
Confidence 12999999 9999999999999999999999999999
Q ss_pred HHcCCcEEEECCCCCCc
Q 018946 311 QRIGMPCVVMRSRCITT 327 (348)
Q Consensus 311 ~~aG~~~i~v~~~~~~~ 327 (348)
+++|+.+|++.++....
T Consensus 179 ~~aG~~~~~~~~~~~~~ 195 (214)
T 3e58_A 179 VAADVEVWAIRDNEFGM 195 (214)
T ss_dssp HHTTCEEEEECCSSSCC
T ss_pred HHCCCEEEEECCCCccc
Confidence 99999999999764443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=203.58 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=133.9
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCC-CCCCCHHHHHHHHhcccCcHH-HHHH-----------------
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGDED-RMLV----------------- 142 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~-~~~~~~~~~~~l~~~~~~~~~-~~~~----------------- 142 (348)
|.+++|+||+||||+|+... +..+|+++++++|++ . .+...+....+....... ....
T Consensus 2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHD--FTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKD 78 (240)
T ss_dssp CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCC--CCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTT
T ss_pred CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCC--CCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccc
Confidence 35789999999999999886 889999999999985 2 344444443332110000 0000
Q ss_pred ----HHhhH------HHHHHHHHh---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchh
Q 018946 143 ----LFFNR------KNALDEFLA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (348)
Q Consensus 143 ----~~~~~------~~~~~~~~~---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~ 209 (348)
..... ...+.+++. ....+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+. +|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~-~f~~ 154 (240)
T 2hi0_A 79 EQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNK---PNEAVQVLVEELFPG-SFDF 154 (240)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHHSTT-TCSE
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCc-ceeE
Confidence 00000 112222222 234578999999999999999999999995 567788999999998 8886
Q ss_pred eeecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHH
Q 018946 210 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 289 (348)
Q Consensus 210 ~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~ 289 (348)
++. ++++. ..||+|++ |+.++++
T Consensus 155 ~~~-~~~~~------------------------------------------~~Kp~p~~--------------~~~~~~~ 177 (240)
T 2hi0_A 155 ALG-EKSGI------------------------------------------RRKPAPDM--------------TSECVKV 177 (240)
T ss_dssp EEE-ECTTS------------------------------------------CCTTSSHH--------------HHHHHHH
T ss_pred EEe-cCCCC------------------------------------------CCCCCHHH--------------HHHHHHH
Confidence 543 32221 13999999 9999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCCCcccc
Q 018946 290 AEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 290 lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
+|++|++|++|||+.+|+.+|+++|+.+|+|.++......+
T Consensus 178 l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~ 218 (240)
T 2hi0_A 178 LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFL 218 (240)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHH
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHH
Confidence 99999999999999999999999999999998876543333
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=198.96 Aligned_cols=190 Identities=16% Similarity=0.124 Sum_probs=139.4
Q ss_pred CCCCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHH-----------HHHhh
Q 018946 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML-----------VLFFN 146 (348)
Q Consensus 78 ~~~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~~ 146 (348)
....+.+|+|+||+||||+++... +..+|.++++++|. .+....+....+.......... .....
T Consensus 13 ~~~~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
T 4ex6_A 13 GAPAAADRGVILDLDGTLADTPAA-IATITAEVLAAMGT---AVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEE 88 (237)
T ss_dssp ----CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTC---CCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHH
T ss_pred CCCcccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCC---CCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 345567899999999999999876 78899999999994 3666555555443211111100 00000
Q ss_pred HHHHHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccc
Q 018946 147 RKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 147 ~~~~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
....+.+.+.. ....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+ +++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~-~~~-------- 156 (237)
T 4ex6_A 89 YGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSK---VEKAARAIAELTGLDTRLTVIAGD-DSV-------- 156 (237)
T ss_dssp HHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSS---CHHHHHHHHHHHTGGGTCSEEECT-TTS--------
T ss_pred HHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCC---ChHHHHHHHHHcCchhheeeEEeC-CCC--------
Confidence 02233333320 33578999999999999999999999995 567889999999999988876432 221
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
. ..||+|++ |+.+++++|++|++|++|||+.+
T Consensus 157 ------~----------------------------~~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD~~~ 188 (237)
T 4ex6_A 157 ------E----------------------------RGKPHPDM--------------ALHVARGLGIPPERCVVIGDGVP 188 (237)
T ss_dssp ------S----------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHH
T ss_pred ------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHH
Confidence 1 12999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCccccc
Q 018946 306 GVAGAQRIGMPCVVMRSRCITTLPVS 331 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~~~l~ 331 (348)
|+.+|+.+|+.+|+|..+.+....+.
T Consensus 189 Di~~a~~aG~~~i~v~~g~~~~~~~~ 214 (237)
T 4ex6_A 189 DAEMGRAAGMTVIGVSYGVSGPDELM 214 (237)
T ss_dssp HHHHHHHTTCEEEEESSSSSCHHHHH
T ss_pred HHHHHHHCCCeEEEEecCCCCHHHHH
Confidence 99999999999999998876544443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=196.46 Aligned_cols=185 Identities=14% Similarity=0.134 Sum_probs=134.8
Q ss_pred CCCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH-HHHHHHH-------hhH---
Q 018946 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLF-------FNR--- 147 (348)
Q Consensus 79 ~~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~-~~~~~~~-------~~~--- 147 (348)
....++++|+||+||||+|+... +..++.++++++|++. .+...+....+...... ....... ...
T Consensus 18 ~~~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (243)
T 2hsz_A 18 QGMTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEF 94 (243)
T ss_dssp -CCSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred cCCccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHH
Confidence 44556789999999999999876 7789999999999873 44554444433211000 0000000 000
Q ss_pred ---HHHHHHHHh---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhh
Q 018946 148 ---KNALDEFLA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (348)
Q Consensus 148 ---~~~~~~~~~---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~ 221 (348)
...+.+.+. ....+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++. ++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~~~~-~~~~~--- 167 (243)
T 2hsz_A 95 KYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSEMLG-GQSLP--- 167 (243)
T ss_dssp HHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEEC-TTTSS---
T ss_pred HHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECC---cHHHHHHHHHHcCchheEEEEEe-cccCC---
Confidence 111112111 234578999999999999999999999995 56788999999999998886543 22211
Q ss_pred cccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEe
Q 018946 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 301 (348)
Q Consensus 222 ~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VG 301 (348)
..||+|++ |+.+++++|++|++|++||
T Consensus 168 ---------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vG 194 (243)
T 2hsz_A 168 ---------------------------------------EIKPHPAP--------------FYYLCGKFGLYPKQILFVG 194 (243)
T ss_dssp ---------------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------------------------CCCcCHHH--------------HHHHHHHhCcChhhEEEEc
Confidence 12999999 9999999999999999999
Q ss_pred cCHhhHHHHHHcCCcEEEECCCCCC
Q 018946 302 GSQSGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 302 Ds~~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
|+.+|+.+|+.+|+.+|++.++...
T Consensus 195 D~~~Di~~a~~aG~~~i~v~~g~~~ 219 (243)
T 2hsz_A 195 DSQNDIFAAHSAGCAVVGLTYGYNY 219 (243)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSCST
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 9999999999999999999987654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=193.35 Aligned_cols=200 Identities=15% Similarity=0.216 Sum_probs=139.5
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH-HHHHHHHhh----H------HHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFN----R------KNA 150 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~----~------~~~ 150 (348)
|.+|+|+||+||||+++... +..+|.++++++|+. +.........+...... .......+. . ...
T Consensus 22 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (243)
T 3qxg_A 22 KKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHE 97 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred ccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45799999999999999876 778999999999987 33333222222111000 001000000 0 112
Q ss_pred HHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc--hheeecchhhhhhhcccccc
Q 018946 151 LDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 151 ~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f--~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.+++.. ....++||+.++|+.|+++|++++++||+ ....+...++. |+..+| +.++.+ +++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~d~i~~~-~~~---------- 162 (243)
T 3qxg_A 98 KSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGS---GQLSLLERLEH-NFPGMFHKELMVTA-FDV---------- 162 (243)
T ss_dssp HHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCC---CCHHHHTTHHH-HSTTTCCGGGEECT-TTC----------
T ss_pred HHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHH-hHHHhcCcceEEeH-HhC----------
Confidence 2222222 34678999999999999999999999996 45777778888 999998 665432 222
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
. ..||+|++ |+.+++++|++|++|++|||+.+|+
T Consensus 163 ----~----------------------------~~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD~~~Di 196 (243)
T 3qxg_A 163 ----K----------------------------YGKPNPEP--------------YLMALKKGGLKADEAVVIENAPLGV 196 (243)
T ss_dssp ----S----------------------------SCTTSSHH--------------HHHHHHHTTCCGGGEEEEECSHHHH
T ss_pred ----C----------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCCHHHH
Confidence 1 12999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCCCccccc--ccccc---hhHHHHhhcc
Q 018946 308 AGAQRIGMPCVVMRSRCITTLPVS--KTQRL---ADMLCRILKS 346 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~~~~~l~--~~~~~---~d~l~~~l~~ 346 (348)
.+|+.+|+.+|++.++......+. .++.+ .+++.+.+..
T Consensus 197 ~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~ 240 (243)
T 3qxg_A 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT 240 (243)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHh
Confidence 999999999999998876655542 23333 4444444443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=191.53 Aligned_cols=199 Identities=16% Similarity=0.137 Sum_probs=142.6
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh----H------HHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R------KNALD 152 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~------~~~~~ 152 (348)
.+|+|+||+||||+++... +..++.++++++|++ +....+....+............... . ...+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIP---LAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHA 80 (233)
T ss_dssp CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 4789999999999998876 778999999999997 45444444433321111111100000 0 11122
Q ss_pred HHHh--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 153 EFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 153 ~~~~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
+.+. .....++||+.++|+.|+++|++++++||+ ....++..++.+|+..+|+.++.+. ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~------------ 144 (233)
T 3s6j_A 81 QAYERLQHQIIALPGAVELLETLDKENLKWCIATSG---GIDTATINLKALKLDINKINIVTRD-DVS------------ 144 (233)
T ss_dssp HHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSS---CHHHHHHHHHTTTCCTTSSCEECGG-GSS------------
T ss_pred HHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCC---chhhHHHHHHhcchhhhhheeeccc-cCC------------
Confidence 2211 123578999999999999999999999995 5678899999999999988764332 211
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|
T Consensus 145 ------------------------------~~kp~~~~--------------~~~~~~~l~~~~~~~i~iGD~~~Di~~a 180 (233)
T 3s6j_A 145 ------------------------------YGKPDPDL--------------FLAAAKKIGAPIDECLVIGDAIWDMLAA 180 (233)
T ss_dssp ------------------------------CCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred ------------------------------CCCCChHH--------------HHHHHHHhCCCHHHEEEEeCCHHhHHHH
Confidence 12999999 9999999999999999999999999999
Q ss_pred HHcCCcEEEECCCCCCcccccc--cccc---hhHHHHhhc
Q 018946 311 QRIGMPCVVMRSRCITTLPVSK--TQRL---ADMLCRILK 345 (348)
Q Consensus 311 ~~aG~~~i~v~~~~~~~~~l~~--~~~~---~d~l~~~l~ 345 (348)
+.+|+.+|+|.++.+....+.. ++.+ .+++.+.+.
T Consensus 181 ~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 181 RRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLD 220 (233)
T ss_dssp HHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGG
T ss_pred HHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHH
Confidence 9999999999987666555543 3333 444444443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=191.51 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=138.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH-h---hH---HHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-F---NR---KNALDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~---~~---~~~~~~~ 154 (348)
|.+++|+||+||||+++... +..++.++++++|+. ++...+....+.. ...+.... . .. ...+.+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFPMA---AEQAMTELGIAASEFDHFQAQYEDV 74 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTTSC---HHHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHcCCc---HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 45789999999999999876 778999999999885 5555554444432 11111100 0 00 1111121
Q ss_pred Hhc--CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 155 LAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 155 ~~~--~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
... ...+++||+.++|+.|+++ ++++|+||+ ....++.+++.+|+..+|+.++.+. +..
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~-------------- 135 (209)
T 2hdo_A 75 MASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQ---RRNELESGMRSYPFMMRMAVTISAD-DTP-------------- 135 (209)
T ss_dssp HTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSS---CHHHHHHHHTTSGGGGGEEEEECGG-GSS--------------
T ss_pred HhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCC---CHHHHHHHHHHcChHhhccEEEecC-cCC--------------
Confidence 111 3467899999999999999 999999995 5678899999999998888664332 211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+.
T Consensus 136 ----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~ 173 (209)
T 2hdo_A 136 ----------------------------KRKPDPLP--------------LLTALEKVNVAPQNALFIGDSVSDEQTAQA 173 (209)
T ss_dssp ----------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred ----------------------------CCCCCcHH--------------HHHHHHHcCCCcccEEEECCChhhHHHHHH
Confidence 13999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCCCcccccccccchhH
Q 018946 313 IGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 313 aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
+|+.++++.++......+..+..+++.
T Consensus 174 aG~~~~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 174 ANVDFGLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp HTCEEEEEGGGCCTTGGGSCCSEEESS
T ss_pred cCCeEEEEcCCCCChhhhccCCEEeCC
Confidence 999999998766544445443333333
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=195.72 Aligned_cols=181 Identities=15% Similarity=0.115 Sum_probs=134.3
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCH-HHHHHHHhcccCcHHHHHHHHhhH----------HHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNR----------KNA 150 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~----------~~~ 150 (348)
|.+++|+||+||||+++... +..++.++++++|++ ... ..+..+.+.............++. ...
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLH---LDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETR 101 (259)
T ss_dssp CCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 46799999999999998876 788999999999987 333 223333322211111111001110 122
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
+.+.+ ....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+..+++.+++..
T Consensus 102 ~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~----------- 165 (259)
T 4eek_A 102 FNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNS---ERGRLHLKLRVAGLTELAGEHIYDPSWVGG----------- 165 (259)
T ss_dssp HHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSS---CHHHHHHHHHHTTCHHHHCSCEECGGGGTT-----------
T ss_pred HHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHhcChHhhccceEEeHhhcCc-----------
Confidence 23322 44678999999999999999999999995 567899999999999999873344433320
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA 310 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|
T Consensus 166 ------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~~Di~~a 201 (259)
T 4eek_A 166 ------------------------------RGKPHPDL--------------YTFAAQQLGILPERCVVIEDSVTGGAAG 201 (259)
T ss_dssp ------------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred ------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence 12999999 9999999999999999999999999999
Q ss_pred HHcCCcEEEECCCCCC
Q 018946 311 QRIGMPCVVMRSRCIT 326 (348)
Q Consensus 311 ~~aG~~~i~v~~~~~~ 326 (348)
+++|+.+|++.++...
T Consensus 202 ~~aG~~~i~v~~g~~~ 217 (259)
T 4eek_A 202 LAAGATLWGLLVPGHP 217 (259)
T ss_dssp HHHTCEEEEECCTTSC
T ss_pred HHCCCEEEEEccCCCc
Confidence 9999999999876543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=191.09 Aligned_cols=174 Identities=16% Similarity=0.242 Sum_probs=123.5
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHH----------------HhhH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL----------------FFNR 147 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~----------------~~~~ 147 (348)
+|+|+||+||||+++... +..+|.++++++|++ ++...+....+............ ....
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIP---FDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRK 77 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 579999999999999876 778999999999987 45544444433321111111100 0000
Q ss_pred HHHHHHHHhcC-CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccc
Q 018946 148 KNALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 226 (348)
Q Consensus 148 ~~~~~~~~~~~-~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v 226 (348)
...+.+.+... ..+++||+.++|+.|+++|++++|+||+ ..+..+++.+|+..+|+.++.+ +++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~gl~~~f~~i~~~-~~~~-------- 143 (233)
T 3nas_A 78 NRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSS-----RNAPKILRRLAIIDDFHAIVDP-TTLA-------- 143 (233)
T ss_dssp HHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCTTTCSEECCC-------------
T ss_pred HHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCc-----hhHHHHHHHcCcHhhcCEEeeH-hhCC--------
Confidence 22333333322 2347999999999999999999999995 2278899999999998865432 2221
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 018946 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (348)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~D 306 (348)
..||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 144 ----------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~vGDs~~D 175 (233)
T 3nas_A 144 ----------------------------------KGKPDPDI--------------FLTAAAMLDVSPADCAAIEDAEAG 175 (233)
T ss_dssp ---------------------------------------CCH--------------HHHHHHHHTSCGGGEEEEECSHHH
T ss_pred ----------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEEeCCHHH
Confidence 23999999 999999999999999999999999
Q ss_pred HHHHHHcCCcEEEECCC
Q 018946 307 VAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~ 323 (348)
+.+|+++||.+|++++.
T Consensus 176 i~~a~~aG~~~~~~~~~ 192 (233)
T 3nas_A 176 ISAIKSAGMFAVGVGQG 192 (233)
T ss_dssp HHHHHHTTCEEEECC--
T ss_pred HHHHHHcCCEEEEECCc
Confidence 99999999999999764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=194.82 Aligned_cols=184 Identities=18% Similarity=0.301 Sum_probs=131.5
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh-----------HHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----------RKN 149 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~ 149 (348)
.+.+|+|+||+||||+++... +..++.++++++|++ ++...+....+.............++ ...
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKK---YSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQT 102 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 356799999999999998876 788999999999987 45555444444321111111111110 012
Q ss_pred HHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecchhhhhhhccccccc
Q 018946 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 150 ~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
.+.+.+ ....+.||+.++|+.|+++|++++|+||+ ....+...+.. +|+..+|+.++.+.+.
T Consensus 103 ~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~---~~~~~~~~l~~~~~l~~~f~~~~~~~~~------------ 165 (250)
T 3l5k_A 103 KLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSS---RSASFDMKTSRHKEFFSLFSHIVLGDDP------------ 165 (250)
T ss_dssp HHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSC---CHHHHHHHTTTCHHHHTTSSCEECTTCT------------
T ss_pred HHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCC---CHHHHHHHHHhccCHHhheeeEEecchh------------
Confidence 223332 23678999999999999999999999995 34555555543 5777777765432210
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC--CcEEEEecCHhh
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQSG 306 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p--~~~i~VGDs~~D 306 (348)
.+. ..||+|++ |+.+++++|++| ++|++|||+.+|
T Consensus 166 -~~~----------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~~i~iGD~~~D 202 (250)
T 3l5k_A 166 -EVQ----------------------------HGKPDPDI--------------FLACAKRFSPPPAMEKCLVFEDAPNG 202 (250)
T ss_dssp -TCC----------------------------SCTTSTHH--------------HHHHHHTSSSCCCGGGEEEEESSHHH
T ss_pred -hcc----------------------------CCCCChHH--------------HHHHHHHcCCCCCcceEEEEeCCHHH
Confidence 111 13999999 999999999998 999999999999
Q ss_pred HHHHHHcCCcEEEECCCCCCcc
Q 018946 307 VAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~~~~~~ 328 (348)
+.+|+++|+.+|+|.++....+
T Consensus 203 i~~a~~aG~~~i~v~~~~~~~~ 224 (250)
T 3l5k_A 203 VEAALAAGMQVVMVPDGNLSRD 224 (250)
T ss_dssp HHHHHHTTCEEEECCCTTSCGG
T ss_pred HHHHHHcCCEEEEEcCCCCchh
Confidence 9999999999999998776544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.9e-25 Score=196.51 Aligned_cols=180 Identities=12% Similarity=0.177 Sum_probs=130.9
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH------HHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR------KNALDEFL 155 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~ 155 (348)
|++++|+||+||||+|+... +..+|.++++++|++. .+.+.+....+. ....+....+.. ...+.+++
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEE--YYPDNVTKYIGG---GVRALLEKVLKDKFREEYVEVFRKHY 74 (222)
T ss_dssp CEECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGG--GCCSCGGGGCSS---CHHHHHHHHHGGGCCTHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCc---CHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 34689999999999999876 7789999999998862 111111111111 111111111000 12222222
Q ss_pred h---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 156 A---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 156 ~---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
. ....+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+. ++.
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~gl~~~f~~i~~~~-~~~-------------- 136 (222)
T 2nyv_A 75 LENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNK---LEELSKKILDILNLSGYFDLIVGGD-TFG-------------- 136 (222)
T ss_dssp HHCSCSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECTT-SSC--------------
T ss_pred HHhccccCccCCCHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCHHHheEEEecC-cCC--------------
Confidence 2 234678999999999999999999999995 5678899999999999888664322 221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|++
T Consensus 137 ----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ 174 (222)
T 2nyv_A 137 ----------------------------EKKPSPTP--------------VLKTLEILGEEPEKALIVGDTDADIEAGKR 174 (222)
T ss_dssp ----------------------------TTCCTTHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred ----------------------------CCCCChHH--------------HHHHHHHhCCCchhEEEECCCHHHHHHHHH
Confidence 12999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCCCc
Q 018946 313 IGMPCVVMRSRCITT 327 (348)
Q Consensus 313 aG~~~i~v~~~~~~~ 327 (348)
+|+.+|+|.++....
T Consensus 175 aG~~~i~v~~g~~~~ 189 (222)
T 2nyv_A 175 AGTKTALALWGYVKL 189 (222)
T ss_dssp HTCEEEEETTSSCSC
T ss_pred CCCeEEEEcCCCCCc
Confidence 999999998876543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-24 Score=190.71 Aligned_cols=184 Identities=14% Similarity=0.143 Sum_probs=130.8
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH-HHHHHHHhh----H------HHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFN----R------KNA 150 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~----~------~~~ 150 (348)
+.+|+|+||+||||+++... +..+|.++++++|+. ..........+...... ..+....++ . ...
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFG---LSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQA 96 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 45789999999999998876 778999999999987 33333222222111000 001000000 0 112
Q ss_pred HHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc--hheeecchhhhhhhcccccc
Q 018946 151 LDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 151 ~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f--~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.+++.. ....++||+.++|+.|+++|++++++||+ ....+...++. |+..+| +.++. .+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~~~~~~-~~~~---------- 161 (247)
T 3dv9_A 97 KTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGS---GQTSLLDRLNH-NFPGIFQANLMVT-AFDV---------- 161 (247)
T ss_dssp HHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSC---C---CHHHHHH-HSTTTCCGGGEEC-GGGC----------
T ss_pred HHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCC---chHHHHHHHHh-hHHHhcCCCeEEe-cccC----------
Confidence 2222222 34678999999999999999999999996 45667777888 999988 66543 2222
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
. .+||+|++ |+.+++++|++|++|++|||+.+|+
T Consensus 162 ----~----------------------------~~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD~~~Di 195 (247)
T 3dv9_A 162 ----K----------------------------YGKPNPEP--------------YLMALKKGGFKPNEALVIENAPLGV 195 (247)
T ss_dssp ----S----------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred ----C----------------------------CCCCCCHH--------------HHHHHHHcCCChhheEEEeCCHHHH
Confidence 1 12999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCCCcccc
Q 018946 308 AGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
.+|+++|+.+|++.++......+
T Consensus 196 ~~a~~aG~~~i~v~~~~~~~~~l 218 (247)
T 3dv9_A 196 QAGVAAGIFTIAVNTGPLHDNVL 218 (247)
T ss_dssp HHHHHTTSEEEEECCSSSCHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCHHHH
Confidence 99999999999999887665543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=190.82 Aligned_cols=180 Identities=14% Similarity=0.187 Sum_probs=133.0
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcc---------cCcHHHHHHHHhhHHHHHHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGDEDRMLVLFFNRKNALDEF 154 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~ 154 (348)
+|+|+||+||||+++... +..++.++++++|++. .....+....+.. .......... ...+.+.
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 76 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQV--EDLSSLNKFVGPPLKTSFMEYYNFDEETATVA----IDYYRDY 76 (226)
T ss_dssp CCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCC--SCGGGGGGGSSSCHHHHHHHHHCCCHHHHHHH----HHHHHHH
T ss_pred CCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCcCHHHHHHHHhCCCHHHHHHH----HHHHHHH
Confidence 789999999999999875 7789999999999873 2222121111111 0001111000 1223333
Q ss_pred Hhc---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccc
Q 018946 155 LAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 155 ~~~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
+.. ....++||+.++|+.|+++|++++++||+ ....++..++.+|+..+|+.++.+. ++
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~-------------- 138 (226)
T 3mc1_A 77 FKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSK---PTVFSKQILEHFKLAFYFDAIVGSS-LD-------------- 138 (226)
T ss_dssp HTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEEC-TT--------------
T ss_pred HHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhCCHhheeeeeccC-CC--------------
Confidence 322 23578999999999999999999999995 5678899999999999988764332 21
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
. .+||+|++ |+.+++++|++|++|++|||+.+|+.+|+
T Consensus 139 ~----------------------------~~kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~~Di~~a~ 176 (226)
T 3mc1_A 139 G----------------------------KLSTKEDV--------------IRYAMESLNIKSDDAIMIGDREYDVIGAL 176 (226)
T ss_dssp S----------------------------SSCSHHHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHH
T ss_pred C----------------------------CCCCCHHH--------------HHHHHHHhCcCcccEEEECCCHHHHHHHH
Confidence 1 12899999 99999999999999999999999999999
Q ss_pred HcCCcEEEECCCCCCcccc
Q 018946 312 RIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 312 ~aG~~~i~v~~~~~~~~~l 330 (348)
.+|+.+|+|.++......+
T Consensus 177 ~aG~~~i~v~~g~~~~~~~ 195 (226)
T 3mc1_A 177 KNNLPSIGVTYGFGSYEEL 195 (226)
T ss_dssp TTTCCEEEESSSSSCHHHH
T ss_pred HCCCCEEEEccCCCCHHHH
Confidence 9999999999877665554
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-24 Score=194.77 Aligned_cols=178 Identities=13% Similarity=0.178 Sum_probs=130.5
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcc--------------cCc-HHHH----HHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------------AGD-EDRM----LVLF 144 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~--------------~~~-~~~~----~~~~ 144 (348)
+|+|+||+||||+++... +..+|.++++++|+. ++...+...+... .+. .... ....
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT 76 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence 479999999999998876 778999999999997 5554433322110 011 1110 1111
Q ss_pred hh------H-------HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhee
Q 018946 145 FN------R-------KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (348)
Q Consensus 145 ~~------~-------~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i 211 (348)
+. . ...+..++....+.++||+.++|+.|+++|++++|+||+. ..+..+++.+|+..+|+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~----~~~~~~l~~~gl~~~f~~~~ 152 (263)
T 3k1z_A 77 FHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFD----RRLEGILGGLGLREHFDFVL 152 (263)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCC----TTHHHHHHHTTCGGGCSCEE
T ss_pred HHHcCCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCc----HHHHHHHHhCCcHHhhhEEE
Confidence 10 0 1222222222335789999999999999999999999962 34688999999999998765
Q ss_pred ecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC
Q 018946 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (348)
Q Consensus 212 ~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg 291 (348)
.+. ++. ..||+|++ |+.+++++|
T Consensus 153 ~~~-~~~------------------------------------------~~Kp~~~~--------------~~~~~~~~g 175 (263)
T 3k1z_A 153 TSE-AAG------------------------------------------WPKPDPRI--------------FQEALRLAH 175 (263)
T ss_dssp EHH-HHS------------------------------------------SCTTSHHH--------------HHHHHHHHT
T ss_pred eec-ccC------------------------------------------CCCCCHHH--------------HHHHHHHcC
Confidence 432 221 23999999 999999999
Q ss_pred CCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCC
Q 018946 292 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 292 v~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
++|++|++|||+. +|+.+|+++||.+|++.++...
T Consensus 176 ~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~ 211 (263)
T 3k1z_A 176 MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQAL 211 (263)
T ss_dssp CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCC
T ss_pred CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCC
Confidence 9999999999997 9999999999999999987644
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=188.40 Aligned_cols=173 Identities=16% Similarity=0.151 Sum_probs=128.4
Q ss_pred CCceEEEEecCCccccccccChHHHH-HHHHHHcCCCCCCCC-------HHHHHHHHhcccCcHHHHHHHHhhHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAF-NVAFQKLGLDCANWT-------APIYTDLLRKSAGDEDRMLVLFFNRKNALDE 153 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~-~~~~~~~gl~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (348)
+.+++|+||+||||+++... +..++ .++++++|++...+. ...+..+.+. ..... ...+.+
T Consensus 23 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-------~~~~~~ 91 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGK---RWKEA-------TILYEN 91 (231)
T ss_dssp CCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHHHGG---GHHHH-------HHHHHH
T ss_pred CCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhCc---hHHHH-------HHHHHH
Confidence 45799999999999999865 56788 999999988642111 1111111111 00000 123333
Q ss_pred HHh----cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccc
Q 018946 154 FLA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 154 ~~~----~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
.+. .....+.||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|+.++.+.+ +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~i~~~~~-~------------ 155 (231)
T 3kzx_A 92 SLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNK---NGERLRSEIHHKNLTHYFDSIIGSGD-T------------ 155 (231)
T ss_dssp HHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEETS-S------------
T ss_pred HHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECC---CHHHHHHHHHHCCchhheeeEEcccc-c------------
Confidence 333 234678999999999999999999999995 56888999999999999887643322 1
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCC-cEEEEecCHhhHH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR-NCFLIAGSQSGVA 308 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~-~~i~VGDs~~Di~ 308 (348)
. .+||+|++ |+.+++++|++|+ +|++|||+.+|+.
T Consensus 156 --~----------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~v~vGD~~~Di~ 191 (231)
T 3kzx_A 156 --G----------------------------TIKPSPEP--------------VLAALTNINIEPSKEVFFIGDSISDIQ 191 (231)
T ss_dssp --S----------------------------CCTTSSHH--------------HHHHHHHHTCCCSTTEEEEESSHHHHH
T ss_pred --C----------------------------CCCCChHH--------------HHHHHHHcCCCcccCEEEEcCCHHHHH
Confidence 1 12999999 9999999999999 9999999999999
Q ss_pred HHHHcCCcEEEECCCCC
Q 018946 309 GAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~ 325 (348)
+|+++|+.+|++.++..
T Consensus 192 ~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 192 SAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp HHHHTTCEEEEECC---
T ss_pred HHHHCCCeEEEECCCCC
Confidence 99999999999976543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=190.76 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=130.4
Q ss_pred CCceEEEEecCCccccccccCh-HHHHHHHHHHcCCCCCCCCHHHHHHHHhcccC------------------------c
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGN-RQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG------------------------D 136 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~-~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~------------------------~ 136 (348)
+.+|+|+||+||||+++... . ..++.++++++|++ +....+....+.... .
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSL-APVYAFMELFKQEGIE---VTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASN 87 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCC-HHHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCC
T ss_pred ccCcEEEEcCCCCcccCCcc-cHHHHHHHHHHHhCCC---CCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCC
Confidence 45799999999999998775 4 68999999999987 333333322222100 0
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc-chheeecch
Q 018946 137 EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNE 215 (348)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~-f~~~i~~~~ 215 (348)
..............+.+.+.. ...++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+ |+.++ +.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~---~~~~~~~~l~~~~~~~~~~~~~~-~~~ 162 (277)
T 3iru_A 88 EEDIKRLYDLFAPIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGY---GPGMMAPALIAAKEQGYTPASTV-FAT 162 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHHHTTCCCSEEE-CGG
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCC---chHHHHHHHHhcCcccCCCceEe-cHH
Confidence 000000000001222222222 3678999999999999999999999995 56788899999998887 66543 333
Q ss_pred hhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-
Q 018946 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 294 (348)
Q Consensus 216 e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p- 294 (348)
++. .+||+|++ |+.+++++|++|
T Consensus 163 ~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~~ 186 (277)
T 3iru_A 163 DVV------------------------------------------RGRPFPDM--------------ALKVALELEVGHV 186 (277)
T ss_dssp GSS------------------------------------------SCTTSSHH--------------HHHHHHHHTCSCG
T ss_pred hcC------------------------------------------CCCCCHHH--------------HHHHHHHcCCCCC
Confidence 221 12999999 999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 295 RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 295 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
++|++|||+.+|+.+|+++|+.+|+|.++..
T Consensus 187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred ccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999999999999999999998864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-23 Score=183.84 Aligned_cols=198 Identities=16% Similarity=0.167 Sum_probs=139.4
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhc----------ccCcHHHHHHH----Hh--
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK----------SAGDEDRMLVL----FF-- 145 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~----------~~~~~~~~~~~----~~-- 145 (348)
|.+|+|+||+||||+++... +..++.++++++|++ +........... ........... ..
T Consensus 5 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIP---LTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 45799999999999998876 778999999999997 333222222111 00011111100 00
Q ss_pred --------hHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhh
Q 018946 146 --------NRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (348)
Q Consensus 146 --------~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~ 217 (348)
.....+.+.+.. ...++||+.++|+.|+++ ++++++||+ ....++..++.+|+..+|+.++.+.+ +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~-~ 154 (238)
T 3ed5_A 81 YGYEADGALLEQKYRRFLEE-GHQLIDGAFDLISNLQQQ-FDLYIVTNG---VSHTQYKRLRDSGLFPFFKDIFVSED-T 154 (238)
T ss_dssp TTCCCCHHHHHHHHHHHHTT-CCCBCTTHHHHHHHHHTT-SEEEEEECS---CHHHHHHHHHHTTCGGGCSEEEEGGG-T
T ss_pred cCCCCcHHHHHHHHHHHHHh-cCCCCccHHHHHHHHHhc-CeEEEEeCC---CHHHHHHHHHHcChHhhhheEEEecc-c
Confidence 002333343332 367899999999999999 999999995 56788899999999999987654332 2
Q ss_pred hhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC-CCCCc
Q 018946 218 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE-KPVRN 296 (348)
Q Consensus 218 ~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg-v~p~~ 296 (348)
. ..||+|++ |+.+++++| ++|++
T Consensus 155 ~------------------------------------------~~kp~~~~--------------~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 155 G------------------------------------------FQKPMKEY--------------FNYVFERIPQFSAEH 178 (238)
T ss_dssp T------------------------------------------SCTTCHHH--------------HHHHHHTSTTCCGGG
T ss_pred C------------------------------------------CCCCChHH--------------HHHHHHHcCCCChhH
Confidence 1 13999999 999999999 99999
Q ss_pred EEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccc---hhHHHHhhc
Q 018946 297 CFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRL---ADMLCRILK 345 (348)
Q Consensus 297 ~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~---~d~l~~~l~ 345 (348)
|++|||+. +|+.+|+++|+.+|++.++.........+..+ .+++.+.+.
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHT
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHH
Confidence 99999998 99999999999999998875433333333333 444444443
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=182.04 Aligned_cols=171 Identities=18% Similarity=0.139 Sum_probs=125.9
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCC
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (348)
+.+|+|+||+||||+++... |.++++++|++. .......+.+.... ..... ......+.+.+.. ...
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~---~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~-~~~ 70 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPA---EDDILTHLAALPAD-ESAAK---HAWLLEHERDLAQ-GSR 70 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCT---TSCHHHHHHHSCHH-HHHHH---HHHHHHTHHHHEE-EEE
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCc---hHHHHHHHhcCChH-HHHHH---HHHHHHHHHHHhh-cCC
Confidence 45789999999999997653 457888899873 23333333222211 11111 0111222232222 356
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc--hheeecchhhhhhhcccccccccccCCchhHH
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f--~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+| +.+ ++.+..
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~i-~~~~~~---------------------- 124 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRN---ARELAHVTLEAIGLADCFAEADV-LGRDEA---------------------- 124 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGSCGGGE-ECTTTS----------------------
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCC---chHHHHHHHHHcCchhhcCcceE-EeCCCC----------------------
Confidence 8999999999999999999999995 578889999999999998 443 332211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
.+||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+|+
T Consensus 125 ---------------------~~kp~~~~--------------~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~ 169 (205)
T 3m9l_A 125 ---------------------PPKPHPGG--------------LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169 (205)
T ss_dssp ---------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEE
Confidence 13999999 9999999999999999999999999999999999999
Q ss_pred ECCCCCC
Q 018946 320 MRSRCIT 326 (348)
Q Consensus 320 v~~~~~~ 326 (348)
+.++...
T Consensus 170 v~~~~~~ 176 (205)
T 3m9l_A 170 VNLPDNP 176 (205)
T ss_dssp CSSSSCS
T ss_pred EeCCCCc
Confidence 9987654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=184.97 Aligned_cols=188 Identities=14% Similarity=0.171 Sum_probs=129.2
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHH-cCCCCC----CC---C-HHHHHHHHhcccCcHH----HHHHHHhhHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCA----NW---T-APIYTDLLRKSAGDED----RMLVLFFNRK 148 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~-~gl~~~----~~---~-~~~~~~l~~~~~~~~~----~~~~~~~~~~ 148 (348)
|.+++|+||+||||+|+... +..+|.+++.+ +|++.. .+ . ...+..++........ ..........
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 80 (234)
T ss_dssp -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHH
Confidence 45789999999999999886 77889999888 687632 00 0 1112222222111111 0111100001
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHC-CCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~-Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
..+.+.+......++||+.++|+.|+++ |++++|+||+ ....++..++.+|+..+|+..+.+. +...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~~-------- 148 (234)
T 2hcf_A 81 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFGAFAD-DALD-------- 148 (234)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCEECTT-TCSS--------
T ss_pred HHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCC---cHHHHHHHHHHCCchhhcCcceecC-CCcC--------
Confidence 1222222112356799999999999999 9999999995 5678889999999999988643322 1110
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC--CCCCcEEEEecCHh
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQS 305 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg--v~p~~~i~VGDs~~ 305 (348)
..||.|.+ |+.+++++| ++|++|++|||+.+
T Consensus 149 ---------------------------------~~k~~~~~--------------~~~~~~~lg~~~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 149 ---------------------------------RNELPHIA--------------LERARRMTGANYSPSQIVIIGDTEH 181 (234)
T ss_dssp ---------------------------------GGGHHHHH--------------HHHHHHHHCCCCCGGGEEEEESSHH
T ss_pred ---------------------------------ccchHHHH--------------HHHHHHHhCCCCCcccEEEECCCHH
Confidence 01566777 999999999 99999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCccc
Q 018946 306 GVAGAQRIGMPCVVMRSRCITTLP 329 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~~~ 329 (348)
|+.+|+++|+.+|+|.++......
T Consensus 182 Di~~a~~aG~~~i~v~~~~~~~~~ 205 (234)
T 2hcf_A 182 DIRCARELDARSIAVATGNFTMEE 205 (234)
T ss_dssp HHHHHHTTTCEEEEECCSSSCHHH
T ss_pred HHHHHHHCCCcEEEEcCCCCCHHH
Confidence 999999999999999987655443
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=180.50 Aligned_cols=181 Identities=15% Similarity=0.214 Sum_probs=130.6
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcc-----------cCcHHHH----HHHHhh
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS-----------AGDEDRM----LVLFFN 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~-----------~~~~~~~----~~~~~~ 146 (348)
|.+|+|+||+||||+++... +..++.++++++|++....+...+...+... ......+ ......
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 56899999999999998875 7789999999999862111333222211110 0000010 000000
Q ss_pred ------------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecc
Q 018946 147 ------------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 147 ------------~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
....+.+.+. ....++||+.++|+.|+ +|++++++||+ ....++..++.+|+..+|+.++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn~---~~~~~~~~l~~~~l~~~f~~~~~~~ 156 (240)
T 3qnm_A 82 AVGVEDEALAERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSNG---FRELQSRKMRSAGVDRYFKKIILSE 156 (240)
T ss_dssp HTTCCCHHHHHHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEECS---CHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred HcCCCcHHHHHHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeCC---chHHHHHHHHHcChHhhceeEEEec
Confidence 0122222222 23678999999999999 99999999995 5678889999999999998765432
Q ss_pred hhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC
Q 018946 215 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 294 (348)
Q Consensus 215 ~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p 294 (348)
++. ..||+|++ |+.+++++|++|
T Consensus 157 -~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~ 179 (240)
T 3qnm_A 157 -DLG------------------------------------------VLKPRPEI--------------FHFALSATQSEL 179 (240)
T ss_dssp -GTT------------------------------------------CCTTSHHH--------------HHHHHHHTTCCG
T ss_pred -cCC------------------------------------------CCCCCHHH--------------HHHHHHHcCCCc
Confidence 221 13999999 999999999999
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEEECCCCC
Q 018946 295 RNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 295 ~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 325 (348)
++|++|||+. +|+.+|+++|+.+++++++..
T Consensus 180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~ 211 (240)
T 3qnm_A 180 RESLMIGDSWEADITGAHGVGMHQAFYNVTER 211 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred ccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence 9999999995 999999999999999998765
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=187.64 Aligned_cols=180 Identities=12% Similarity=0.174 Sum_probs=133.2
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcc---------cCcHHHHHHHHhhHHHHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGDEDRMLVLFFNRKNALDE 153 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~ 153 (348)
.+|+|+||+||||+++... +..+|.++++++|++ +....+....+.. .......... ...+.+
T Consensus 28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 99 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIK---EDLENLDQFIGPPLHDTFKEYYKFEDKKAKEA----VEKYRE 99 (240)
T ss_dssp CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC---CCGGGGGGGSSSCHHHHHHHTSCCCHHHHHHH----HHHHHH
T ss_pred hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhCccHHHHHHHHhCCCHHHHHHH----HHHHHH
Confidence 3699999999999999876 778999999999987 3322221111110 1111111111 112222
Q ss_pred HHhc---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccc
Q 018946 154 FLAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 154 ~~~~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
.+.. ....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+. +..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~------------ 163 (240)
T 3sd7_A 100 YFADKGIFENKIYENMKEILEMLYKNGKILLVATSK---PTVFAETILRYFDIDRYFKYIAGSN-LDG------------ 163 (240)
T ss_dssp HHHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEEC-TTS------------
T ss_pred HHHHhcccccccCccHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHcCcHhhEEEEEecc-ccC------------
Confidence 2221 23678999999999999999999999995 5788899999999999998764332 111
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcEEEEecCHhhHHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAG 309 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~i~VGDs~~Di~a 309 (348)
.+||+|++ |+.+++++|++ |++|++|||+.+|+.+
T Consensus 164 ------------------------------~~kp~~~~--------------~~~~~~~~g~~~~~~~i~vGD~~~Di~~ 199 (240)
T 3sd7_A 164 ------------------------------TRVNKNEV--------------IQYVLDLCNVKDKDKVIMVGDRKYDIIG 199 (240)
T ss_dssp ------------------------------CCCCHHHH--------------HHHHHHHHTCCCGGGEEEEESSHHHHHH
T ss_pred ------------------------------CCCCCHHH--------------HHHHHHHcCCCCCCcEEEECCCHHHHHH
Confidence 12899999 99999999999 9999999999999999
Q ss_pred HHHcCCcEEEECCCCCCcccc
Q 018946 310 AQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 310 A~~aG~~~i~v~~~~~~~~~l 330 (348)
|+++|+.+|++.++......+
T Consensus 200 a~~aG~~~i~v~~g~~~~~~~ 220 (240)
T 3sd7_A 200 AKKIGIDSIGVLYGYGSFEEI 220 (240)
T ss_dssp HHHHTCEEEEESSSSCCHHHH
T ss_pred HHHCCCCEEEEeCCCCCHHHH
Confidence 999999999999877665554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=187.08 Aligned_cols=179 Identities=16% Similarity=0.139 Sum_probs=127.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcC---CCCCCCCH-HHHHHHH-hcc--c---Cc-HHHHHHHH--------
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLG---LDCANWTA-PIYTDLL-RKS--A---GD-EDRMLVLF-------- 144 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~g---l~~~~~~~-~~~~~l~-~~~--~---~~-~~~~~~~~-------- 144 (348)
+++|+||+||||+|+... +..+|.+++++++ +. ... ..+..+. +.. . .. ...+....
T Consensus 2 ~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLP---VDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKW 77 (241)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCC---SCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHH
T ss_pred ccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHcccc---ccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchH
Confidence 579999999999999876 7778888888764 33 222 2222211 000 0 00 00111000
Q ss_pred -hhHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcc
Q 018946 145 -FNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (348)
Q Consensus 145 -~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~ 223 (348)
......+.+.+.. ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|+.++.+. ++.
T Consensus 78 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~----- 147 (241)
T 2hoq_A 78 ISAGVIAYHNTKFA-YLREVPGARKVLIRLKELGYELGIITDG---NPVKQWEKILRLELDDFFEHVIISD-FEG----- 147 (241)
T ss_dssp HHHHHHHHHHHHHH-HCCBCTTHHHHHHHHHHHTCEEEEEECS---CHHHHHHHHHHTTCGGGCSEEEEGG-GGT-----
T ss_pred HHHHHHHHHHHHHh-hCCCCccHHHHHHHHHHCCCEEEEEECC---CchhHHHHHHHcCcHhhccEEEEeC-CCC-----
Confidence 0001223332222 2567999999999999999999999995 5678889999999999998765432 221
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC
Q 018946 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (348)
Q Consensus 224 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs 303 (348)
..||+|++ |+.+++++|++|++|++|||+
T Consensus 148 -------------------------------------~~Kp~~~~--------------~~~~~~~~g~~~~~~i~iGD~ 176 (241)
T 2hoq_A 148 -------------------------------------VKKPHPKI--------------FKKALKAFNVKPEEALMVGDR 176 (241)
T ss_dssp -------------------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESC
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEECCC
Confidence 13999999 999999999999999999999
Q ss_pred H-hhHHHHHHcCCcEEEECCCCCCc
Q 018946 304 Q-SGVAGAQRIGMPCVVMRSRCITT 327 (348)
Q Consensus 304 ~-~Di~aA~~aG~~~i~v~~~~~~~ 327 (348)
. +|+.+|+++|+.+|++.++....
T Consensus 177 ~~~Di~~a~~aG~~~~~v~~g~~~~ 201 (241)
T 2hoq_A 177 LYSDIYGAKRVGMKTVWFRYGKHSE 201 (241)
T ss_dssp TTTTHHHHHHTTCEEEEECCSCCCH
T ss_pred chHhHHHHHHCCCEEEEECCCCCCc
Confidence 8 99999999999999997765443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=194.56 Aligned_cols=106 Identities=9% Similarity=0.056 Sum_probs=90.5
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc---CCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l---gl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
...++||+.++|+.|+++|++++|+||+ ....++.+++.+ |+.++|+.++.+ ++.
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~~~~l~~~fd~i~~~--~~~----------------- 185 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSG---SVEAQKLLFGHSTEGDILELVDGHFDT--KIG----------------- 185 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHTBTTBCCGGGCSEEECG--GGC-----------------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHhhcccChHhhccEEEec--CCC-----------------
Confidence 4678999999999999999999999996 456778888854 588999876432 221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||
T Consensus 186 --------------------------~KP~p~~--------------~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 --------------------------HKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp --------------------------CTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred --------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence 1999999 999999999999999999999999999999999
Q ss_pred cEEEECCCCCC
Q 018946 316 PCVVMRSRCIT 326 (348)
Q Consensus 316 ~~i~v~~~~~~ 326 (348)
.+|+|.++...
T Consensus 226 ~~i~v~~~~~~ 236 (261)
T 1yns_A 226 HVAVVVRPGNA 236 (261)
T ss_dssp EEEEECCTTCC
T ss_pred EEEEEeCCCCC
Confidence 99999765443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-23 Score=181.39 Aligned_cols=183 Identities=15% Similarity=0.132 Sum_probs=133.3
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh------------h-HH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF------------N-RK 148 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------~-~~ 148 (348)
|.+|+|+||+||||+++... +..++.++++++|... .....+....+.. ......... . ..
T Consensus 4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTG--ITDDMIKRTIGKT---LEESFSILTGITDADQLESFRQEYS 77 (225)
T ss_dssp -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHTTTTSC---HHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhCCc---HHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 56789999999999998875 7788999999998862 4333333222221 111111000 0 01
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
..+.+.+.. ...+.||+.++++.+++.|++++++||. ....++..++.+|+..+|+.++.+ ++..
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------- 142 (225)
T 3d6j_A 78 KEADIYMNA-NTILFPDTLPTLTHLKKQGIRIGIISTK---YRFRILSFLRNHMPDDWFDIIIGG-EDVT---------- 142 (225)
T ss_dssp HHHHHHTGG-GCEECTTHHHHHHHHHHHTCEEEEECSS---CHHHHHHHHHTSSCTTCCSEEECG-GGCS----------
T ss_pred HHHHHhccc-cCccCcCHHHHHHHHHHCCCeEEEEECC---CHHHHHHHHHHcCchhheeeeeeh-hhcC----------
Confidence 122232222 3567999999999999999999999995 567788889999998888765432 2111
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
..||++++ |+.+++++|++|++|++|||+.+|+.
T Consensus 143 --------------------------------~~k~~~~~--------------~~~~~~~~~~~~~~~i~iGD~~nDi~ 176 (225)
T 3d6j_A 143 --------------------------------HHKPDPEG--------------LLLAIDRLKACPEEVLYIGDSTVDAG 176 (225)
T ss_dssp --------------------------------SCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred --------------------------------CCCCChHH--------------HHHHHHHhCCChHHeEEEcCCHHHHH
Confidence 12899999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCCCccccc
Q 018946 309 GAQRIGMPCVVMRSRCITTLPVS 331 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~~~~~l~ 331 (348)
+|+.+|+.++++.++.+....+.
T Consensus 177 ~~~~aG~~~~~~~~~~~~~~~l~ 199 (225)
T 3d6j_A 177 TAAAAGVSFTGVTSGMTTAQEFQ 199 (225)
T ss_dssp HHHHHTCEEEEETTSSCCTTGGG
T ss_pred HHHHCCCeEEEECCCCCChHHHh
Confidence 99999999999998877665554
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=178.91 Aligned_cols=182 Identities=15% Similarity=0.174 Sum_probs=130.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCC---------CCC-HHHHHHHHhc---ccCcHHHHHHHHhhHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA---------NWT-APIYTDLLRK---SAGDEDRMLVLFFNRKN 149 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~---------~~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~~ 149 (348)
++|+|+||+||||+++... +..++.++++++|++.. ... ......+... ............ ..
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 83 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERV---IA 83 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHH---HH
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHH---HH
Confidence 4789999999999998876 67888999999988631 001 1111111111 001111111110 12
Q ss_pred HHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccc
Q 018946 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 150 ~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
.+.+.+.. ...+.||+.++|+.+++.|++++++||. ....++..++.+|+..+|+.++.+.+ .
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~~~~~~~~~-~------------ 146 (226)
T 1te2_A 84 RAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASAS---PLHMLEKVLTMFDLRDSFDALASAEK-L------------ 146 (226)
T ss_dssp HHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEECTT-S------------
T ss_pred HHHHHHhc-cCCcCccHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhcCcHhhCcEEEeccc-c------------
Confidence 22222222 2567999999999999999999999995 56778889999999988876643321 1
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~a 309 (348)
. ..||++++ |+.+++++|+++++|++|||+.+|+.+
T Consensus 147 --~----------------------------~~kp~~~~--------------~~~~~~~~~i~~~~~i~iGD~~nDi~~ 182 (226)
T 1te2_A 147 --P----------------------------YSKPHPQV--------------YLDCAAKLGVDPLTCVALEDSVNGMIA 182 (226)
T ss_dssp --S----------------------------CCTTSTHH--------------HHHHHHHHTSCGGGEEEEESSHHHHHH
T ss_pred --C----------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCCHHHHHH
Confidence 1 12899999 999999999999999999999999999
Q ss_pred HHHcCCcEEEECCCCCCccc
Q 018946 310 AQRIGMPCVVMRSRCITTLP 329 (348)
Q Consensus 310 A~~aG~~~i~v~~~~~~~~~ 329 (348)
|+.+|+.++++.++.+....
T Consensus 183 a~~aG~~~~~~~~~~~~~~~ 202 (226)
T 1te2_A 183 SKAARMRSIVVPAPEAQNDP 202 (226)
T ss_dssp HHHTTCEEEECCCTTTTTCG
T ss_pred HHHcCCEEEEEcCCCCcccc
Confidence 99999999999988765443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=175.95 Aligned_cols=178 Identities=16% Similarity=0.167 Sum_probs=128.8
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHh-cccCcHHHHHH--HHh-h-HHHHHHHHHh
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR-KSAGDEDRMLV--LFF-N-RKNALDEFLA 156 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~-~~~~~~~~~~~--~~~-~-~~~~~~~~~~ 156 (348)
|++|+|+||+||||+++... +...+.++++++|+. +....+....+ ........... ... . ....+.+...
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSL 77 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHHSCHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHccccHHHHHHHhhchhhccHHHHHHHHHHHH
Confidence 45789999999999998875 678889999999885 45555555444 22111111110 000 0 0112222221
Q ss_pred c---CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 157 S---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 157 ~---~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
. ....+.||+.++|+.|+++|++++++||+ ...... .++.+|+..+|+.++.+. +..
T Consensus 78 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~-~~~~~~~~~~f~~~~~~~-~~~--------------- 137 (207)
T 2go7_A 78 AEKNAQVVLMPGAREVLAWADESGIQQFIYTHK---GNNAFT-ILKDLGVESYFTEILTSQ-SGF--------------- 137 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECSS---CTHHHH-HHHHHTCGGGEEEEECGG-GCC---------------
T ss_pred HhccccceeCcCHHHHHHHHHHCCCeEEEEeCC---chHHHH-HHHHcCchhheeeEEecC-cCC---------------
Confidence 1 23567999999999999999999999995 456677 889999998887654332 111
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+
T Consensus 138 ---------------------------~~Kp~~~~--------------~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~a 176 (207)
T 2go7_A 138 ---------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNS 176 (207)
T ss_dssp ---------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ---------------------------CCCCCcHH--------------HHHHHHHhCCCcccEEEECCCHHHHHHHHHC
Confidence 12999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCC
Q 018946 314 GMPCVVMRSRC 324 (348)
Q Consensus 314 G~~~i~v~~~~ 324 (348)
|+.+|++.++.
T Consensus 177 G~~~i~~~~~~ 187 (207)
T 2go7_A 177 GIQSINFLEST 187 (207)
T ss_dssp TCEEEESSCCS
T ss_pred CCeEEEEecCC
Confidence 99999998876
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=187.75 Aligned_cols=181 Identities=13% Similarity=0.164 Sum_probs=125.0
Q ss_pred CCCCceEEEEecCCccccccccChHHHHHHHHHH----cCCCCCCCCHHH----HHHHHhccc----CcHHHH----HHH
Q 018946 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK----LGLDCANWTAPI----YTDLLRKSA----GDEDRM----LVL 143 (348)
Q Consensus 80 ~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~----~gl~~~~~~~~~----~~~l~~~~~----~~~~~~----~~~ 143 (348)
..+++++||||+||||+|+... +..+|++++++ +|++. -.... +..+.+... ...... ...
T Consensus 14 ~~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 2gfh_A 14 GLSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE--EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEE 90 (260)
T ss_dssp ECCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT--HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHH
T ss_pred ccccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHH
Confidence 3456889999999999999886 77888888764 55541 00111 111221100 000000 000
Q ss_pred Hh----------hH-HHHHHHHHh--cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe
Q 018946 144 FF----------NR-KNALDEFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (348)
Q Consensus 144 ~~----------~~-~~~~~~~~~--~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~ 210 (348)
.+ .. ...+..+.. ....+++||+.++|+.|++ +++++|+||+ ....++.+++.+|+..+|+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~---~~~~~~~~l~~~gl~~~f~~i 166 (260)
T 2gfh_A 91 AIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNG---DRQTQREKIEACACQSYFDAI 166 (260)
T ss_dssp HHHHHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECS---CHHHHHHHHHHHTCGGGCSEE
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECc---ChHHHHHHHHhcCHHhhhheE
Confidence 00 00 111111111 1246789999999999998 5999999995 567788999999999999876
Q ss_pred eecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc
Q 018946 211 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 290 (348)
Q Consensus 211 i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l 290 (348)
+.+.+ +. ..||+|++ |+.+++++
T Consensus 167 ~~~~~-~~------------------------------------------~~KP~p~~--------------~~~~~~~~ 189 (260)
T 2gfh_A 167 VIGGE-QK------------------------------------------EEKPAPSI--------------FYHCCDLL 189 (260)
T ss_dssp EEGGG-SS------------------------------------------SCTTCHHH--------------HHHHHHHH
T ss_pred EecCC-CC------------------------------------------CCCCCHHH--------------HHHHHHHc
Confidence 54432 21 12999999 99999999
Q ss_pred CCCCCcEEEEecC-HhhHHHHHHcCC-cEEEECCCC
Q 018946 291 EKPVRNCFLIAGS-QSGVAGAQRIGM-PCVVMRSRC 324 (348)
Q Consensus 291 gv~p~~~i~VGDs-~~Di~aA~~aG~-~~i~v~~~~ 324 (348)
|++|++|+||||+ .+|+.+|+++|| .+|++.++.
T Consensus 190 ~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~ 225 (260)
T 2gfh_A 190 GVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSG 225 (260)
T ss_dssp TCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred CCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCC
Confidence 9999999999995 999999999999 799997653
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=176.96 Aligned_cols=177 Identities=14% Similarity=0.087 Sum_probs=125.1
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHH---HHHH--------H--hcccCcHHHHHHH---Hhh-
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDL--------L--RKSAGDEDRMLVL---FFN- 146 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~---~~~l--------~--~~~~~~~~~~~~~---~~~- 146 (348)
+|+|+||+||||+++... +...+.++++++|... .... +... . +............ .++
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 79 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHI---KDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV 79 (235)
T ss_dssp CCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCC---cHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC
Confidence 689999999999998875 6788889998888762 2211 2111 0 1111100011100 000
Q ss_pred ----HHHHHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCC---chHHHHHHHHcCCcccchheeecchhhh
Q 018946 147 ----RKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---DRIARSVVEKLGSERISKIKIVGNEEVE 218 (348)
Q Consensus 147 ----~~~~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~---~~~~~~il~~lgl~~~f~~~i~~~~e~~ 218 (348)
....+..+... ....++||+.++|+.|+++|++++++||+ . ...++..++.+|+..+|+.++.+. ++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~~~~l~~~~l~~~f~~~~~~~-~~~ 155 (235)
T 2om6_A 80 DVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNV---MFWPGSYTRLLLERFGLMEFIDKTFFAD-EVL 155 (235)
T ss_dssp CHHHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECC---CSSCHHHHHHHHHHTTCGGGCSEEEEHH-HHT
T ss_pred CHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCC---cccchhHHHHHHHhCCcHHHhhhheecc-ccC
Confidence 01111111111 11235999999999999999999999995 4 577888999999999998764432 221
Q ss_pred hhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEE
Q 018946 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 298 (348)
Q Consensus 219 ~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i 298 (348)
..||+|++ |+.+++++|++|++|+
T Consensus 156 ------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~~~~~ 179 (235)
T 2om6_A 156 ------------------------------------------SYKPRKEM--------------FEKVLNSFEVKPEESL 179 (235)
T ss_dssp ------------------------------------------CCTTCHHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------------------------------------CCCCCHHH--------------HHHHHHHcCCCccceE
Confidence 23999999 9999999999999999
Q ss_pred EEecCH-hhHHHHHHcCCcEEEECCCC
Q 018946 299 LIAGSQ-SGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~i~v~~~~ 324 (348)
+|||+. +|+.+|+.+|+.++++.++.
T Consensus 180 ~iGD~~~nDi~~a~~aG~~~~~~~~~~ 206 (235)
T 2om6_A 180 HIGDTYAEDYQGARKVGMWAVWINQEG 206 (235)
T ss_dssp EEESCTTTTHHHHHHTTSEEEEECTTC
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCC
Confidence 999999 99999999999999998874
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-23 Score=179.78 Aligned_cols=179 Identities=15% Similarity=0.153 Sum_probs=128.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHH----hcccCcHHHHHHHHhh------HHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL----RKSAGDEDRMLVLFFN------RKNAL 151 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~------~~~~~ 151 (348)
|.+++|+||+||||+++.. ...++.++++++|++. .......... ................ ....+
T Consensus 2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDT--DDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPEDF 77 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHHH
T ss_pred CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCH--HHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHHH
Confidence 4578999999999999875 3578889999998862 1111111110 1111111111111100 02234
Q ss_pred HHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccc
Q 018946 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 152 ~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
.+.+... ..++||+.++|+.|+++| +++|+||+ ....+..+++.+|+..+|+.++.+. ++
T Consensus 78 ~~~~~~~-~~~~~~~~~~l~~l~~~g-~~~i~s~~---~~~~~~~~l~~~~~~~~f~~~~~~~-~~-------------- 137 (200)
T 3cnh_A 78 RAVMEEQ-SQPRPEVLALARDLGQRY-RMYSLNNE---GRDLNEYRIRTFGLGEFLLAFFTSS-AL-------------- 137 (200)
T ss_dssp HHHHHHT-CCBCHHHHHHHHHHTTTS-EEEEEECC---CHHHHHHHHHHHTGGGTCSCEEEHH-HH--------------
T ss_pred HHHHHhc-CccCccHHHHHHHHHHcC-CEEEEeCC---cHHHHHHHHHhCCHHHhcceEEeec-cc--------------
Confidence 4443333 458999999999999999 99999995 5678889999999999988764332 21
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
...||+|++ |+.+++++|++|++|++|||+.+|+.+|+
T Consensus 138 ----------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~Di~~a~ 175 (200)
T 3cnh_A 138 ----------------------------GVMKPNPAM--------------YRLGLTLAQVRPEEAVMVDDRLQNVQAAR 175 (200)
T ss_dssp ----------------------------SCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHH
T ss_pred ----------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHHHHHHH
Confidence 123999999 99999999999999999999999999999
Q ss_pred HcCCcEEEECCCCCC
Q 018946 312 RIGMPCVVMRSRCIT 326 (348)
Q Consensus 312 ~aG~~~i~v~~~~~~ 326 (348)
++|+.+|++.++...
T Consensus 176 ~aG~~~~~~~~~~~~ 190 (200)
T 3cnh_A 176 AVGMHAVQCVDAAQL 190 (200)
T ss_dssp HTTCEEEECSCHHHH
T ss_pred HCCCEEEEECCchhh
Confidence 999999999875443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=183.56 Aligned_cols=186 Identities=12% Similarity=0.064 Sum_probs=128.1
Q ss_pred CCCCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc-------------HHHHHH---
Q 018946 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-------------EDRMLV--- 142 (348)
Q Consensus 79 ~~~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~-------------~~~~~~--- 142 (348)
...|.+|+|+||+||||+++... +..++.++++++|++. ..........+..... ......
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTL--PCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSL 93 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCC--CHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 34677899999999999998775 7789999999999872 2222222222211000 000000
Q ss_pred -HHhhH------HHHHHHHHh-cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecc
Q 018946 143 -LFFNR------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 143 -~~~~~------~~~~~~~~~-~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
..... ......+.. .....++||+.++|+.|++. ++++++||+ ....+..+++.+|+. |+.++ +.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~l~~~g~~--f~~~~-~~ 166 (254)
T 3umc_A 94 EALAGEFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNG---NTALMLDVARHAGLP--WDMLL-CA 166 (254)
T ss_dssp HHHHHHTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSS---CHHHHHHHHHHHTCC--CSEEC-CH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCC---CHHHHHHHHHHcCCC--cceEE-ee
Confidence 00000 011111111 12356789999999999986 999999995 567788899999986 65542 22
Q ss_pred hhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC
Q 018946 215 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 294 (348)
Q Consensus 215 ~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p 294 (348)
+.+ ...||+|++ |+.+++++|++|
T Consensus 167 ~~~------------------------------------------~~~kp~~~~--------------~~~~~~~lgi~~ 190 (254)
T 3umc_A 167 DLF------------------------------------------GHYKPDPQV--------------YLGACRLLDLPP 190 (254)
T ss_dssp HHH------------------------------------------TCCTTSHHH--------------HHHHHHHHTCCG
T ss_pred ccc------------------------------------------ccCCCCHHH--------------HHHHHHHcCCCh
Confidence 222 134999999 999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEC----CCCCCcccc
Q 018946 295 RNCFLIAGSQSGVAGAQRIGMPCVVMR----SRCITTLPV 330 (348)
Q Consensus 295 ~~~i~VGDs~~Di~aA~~aG~~~i~v~----~~~~~~~~l 330 (348)
++|++|||+.+|+.+|+.+|+.++++. ++....+.+
T Consensus 191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l 230 (254)
T 3umc_A 191 QEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDL 230 (254)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSS
T ss_pred HHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCccc
Confidence 999999999999999999999999998 444444444
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=178.50 Aligned_cols=102 Identities=15% Similarity=0.042 Sum_probs=90.1
Q ss_pred CCCCCCCcHHHHHHHHHHCC-CcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCch
Q 018946 158 KDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~G-i~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
....++||+.++|+.|+++| ++++++||+ ....+...++.+|+.++|+.++.+
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~~~~~----------------------- 155 (234)
T 3ddh_A 102 MPIELLPGVKETLKTLKETGKYKLVVATKG---DLLDQENKLERSGLSPYFDHIEVM----------------------- 155 (234)
T ss_dssp CCCCBCTTHHHHHHHHHHHCCCEEEEEEES---CHHHHHHHHHHHTCGGGCSEEEEE-----------------------
T ss_pred ccCCcCccHHHHHHHHHhCCCeEEEEEeCC---chHHHHHHHHHhCcHhhhheeeec-----------------------
Confidence 34678999999999999999 999999995 567788999999999988865421
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCC
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 315 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~ 315 (348)
.||+|++ |+.+++++|++|++|++|||+. +|+.+|+.+|+
T Consensus 156 -------------------------~kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~ 196 (234)
T 3ddh_A 156 -------------------------SDKTEKE--------------YLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGG 196 (234)
T ss_dssp -------------------------SCCSHHH--------------HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTC
T ss_pred -------------------------CCCCHHH--------------HHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCC
Confidence 1888888 9999999999999999999996 99999999999
Q ss_pred cEEEECCCC
Q 018946 316 PCVVMRSRC 324 (348)
Q Consensus 316 ~~i~v~~~~ 324 (348)
.+|+|.++.
T Consensus 197 ~~v~v~~~~ 205 (234)
T 3ddh_A 197 YGVHIPFEV 205 (234)
T ss_dssp EEEECCCCT
T ss_pred eEEEecCCc
Confidence 999996654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=179.54 Aligned_cols=180 Identities=16% Similarity=0.112 Sum_probs=125.7
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHh--------cccCcHHHHHHHHhhH------H
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------KSAGDEDRMLVLFFNR------K 148 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~------~ 148 (348)
.+++|+||+||||+++.. ..+.+.+.++|++ .....+....+ ................ .
T Consensus 27 ~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR----ERCIENFKKIGFQ---NIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSD 99 (229)
T ss_dssp CCCEEEECSBTTTBCBCH----HHHHHHHHHHTCT---THHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCH
T ss_pred CCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCC---cHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCH
Confidence 468999999999999763 5677888888886 33333322111 0101111111111110 2
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHH------HHcCCcccchheeecchhhhhhhc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV------EKLGSERISKIKIVGNEEVERSLY 222 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il------~~lgl~~~f~~~i~~~~e~~~~~~ 222 (348)
..+.+.+.....++.||+.++|+.|+++ ++++|+||+ ....+..++ +.+|+..+|+.++.+. ++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~---~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~-~~----- 169 (229)
T 4dcc_A 100 KQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSNT---NDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY-EM----- 169 (229)
T ss_dssp HHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEECC---CHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH-HH-----
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEECC---ChHHHHHHHhhhhhhccCCHHHhCCEEEeec-cc-----
Confidence 2333333333345789999999999999 999999996 456666554 6678888888664332 22
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 223 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
...||+|++ |+.+++++|++|++|++|||
T Consensus 170 -------------------------------------~~~KP~~~~--------------~~~~~~~~g~~~~~~~~vGD 198 (229)
T 4dcc_A 170 -------------------------------------KMAKPEPEI--------------FKAVTEDAGIDPKETFFIDD 198 (229)
T ss_dssp -------------------------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEECS
T ss_pred -------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEECC
Confidence 124999999 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcEEEECCCCCCcccc
Q 018946 303 SQSGVAGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 303 s~~Di~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
+.+||.+|+++|+.+|++.++....+.+
T Consensus 199 ~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 199 SEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp CHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred CHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 9999999999999999999876554444
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=173.81 Aligned_cols=113 Identities=13% Similarity=0.117 Sum_probs=97.0
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|+++|++++++||+ ....++.+++.+|+..+|+.++.+. ++.
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~-------------------- 149 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNG---SRHSIRQVVGNSGLTNSFDHLISVD-EVR-------------------- 149 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEEGG-GTT--------------------
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHHCCChhhcceeEehh-hcc--------------------
Confidence 4678999999999999999999999995 5678889999999999998764332 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.++
T Consensus 150 ----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~ 193 (230)
T 3um9_A 150 ----------------------LFKPHQKV--------------YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVC 193 (230)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------cCCCChHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EECCCCCCccccc
Q 018946 319 VMRSRCITTLPVS 331 (348)
Q Consensus 319 ~v~~~~~~~~~l~ 331 (348)
++.++.+....+.
T Consensus 194 ~~~~~~~~~~~~~ 206 (230)
T 3um9_A 194 WINRSNGVFDQLG 206 (230)
T ss_dssp EECTTSCCCCCSS
T ss_pred EEeCCCCcccccc
Confidence 9998866655443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-23 Score=185.31 Aligned_cols=174 Identities=14% Similarity=0.171 Sum_probs=121.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHH-HHHHH---Hhccc---------CcHHHHHHHHh-h-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDL---LRKSA---------GDEDRMLVLFF-N- 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~-~~~~l---~~~~~---------~~~~~~~~~~~-~- 146 (348)
|.+++|+||+||||+|+... +..+|.+++.++|++ .+.+ .+..+ ++... .....+..... .
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYD---LDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP 76 (220)
T ss_dssp CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCC---CCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC
T ss_pred CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC
Confidence 45789999999999999876 778999999999987 3433 33332 22211 00111111110 0
Q ss_pred HHHHHHHHHh----cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhc
Q 018946 147 RKNALDEFLA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222 (348)
Q Consensus 147 ~~~~~~~~~~----~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~ 222 (348)
......++.. ....+++||+.++|+.|+++|++++|+||+ . ..++.+++.+|+.++|+.++.+. ++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~---~-~~~~~~l~~~gl~~~f~~~~~~~-~~~---- 147 (220)
T 2zg6_A 77 SERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNA---S-PRVKTLLEKFDLKKYFDALALSY-EIK---- 147 (220)
T ss_dssp CHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSC---H-HHHHHHHHHHTCGGGCSEEC-----------
T ss_pred cHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCC---c-HHHHHHHHhcCcHhHeeEEEecc-ccC----
Confidence 0122222221 123568999999999999999999999995 2 35788999999999998764332 221
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 223 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
..||+|++ |+.+++++|++| +||||
T Consensus 148 --------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~---~~vgD 172 (220)
T 2zg6_A 148 --------------------------------------AVKPNPKI--------------FGFALAKVGYPA---VHVGD 172 (220)
T ss_dssp -------------------------------------------CCH--------------HHHHHHHHCSSE---EEEES
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCe---EEEcC
Confidence 23999999 999999999998 99999
Q ss_pred CHh-hHHHHHHcCCcEEEECCC
Q 018946 303 SQS-GVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 303 s~~-Di~aA~~aG~~~i~v~~~ 323 (348)
+.+ |+.+|+++||.+|++.++
T Consensus 173 ~~~~Di~~a~~aG~~~i~v~~~ 194 (220)
T 2zg6_A 173 IYELDYIGAKRSYVDPILLDRY 194 (220)
T ss_dssp SCCCCCCCSSSCSEEEEEBCTT
T ss_pred CchHhHHHHHHCCCeEEEECCC
Confidence 998 999999999999999865
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=172.64 Aligned_cols=172 Identities=15% Similarity=0.124 Sum_probs=125.1
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh-------hHHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-------NRKNALDEF 154 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~ 154 (348)
|.+++|+||+||||+|+... +..+|.++++++|+. .+...+...+... .......... .....+.+.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKVS--TPFAIETFAPNLENFLEKYKENEARE 77 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHC--HHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHccc--cHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 45789999999999998875 778999999999986 4433333222111 1111111000 001222333
Q ss_pred HhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCC
Q 018946 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (348)
Q Consensus 155 ~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~ 234 (348)
+.. ..++||+.++|+.|+++|++++++||. ...++..++.+|+..+|+.++.+ +++ .
T Consensus 78 ~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~----~~~~~~~l~~~~~~~~f~~~~~~-~~~--------------~-- 134 (190)
T 2fi1_A 78 LEH--PILFEGVSDLLEDISNQGGRHFLVSHR----NDQVLEILEKTSIAAYFTEVVTS-SSG--------------F-- 134 (190)
T ss_dssp TTS--CCBCTTHHHHHHHHHHTTCEEEEECSS----CTHHHHHHHHTTCGGGEEEEECG-GGC--------------C--
T ss_pred cCc--CccCcCHHHHHHHHHHCCCcEEEEECC----cHHHHHHHHHcCCHhheeeeeec-ccc--------------C--
Confidence 222 238999999999999999999999995 34678899999999888765432 221 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 018946 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (348)
Q Consensus 235 ~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 314 (348)
.+||+|++ |+.+++++|++ +|++|||+.+|+.+|+.+|
T Consensus 135 --------------------------~~kp~~~~--------------~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG 172 (190)
T 2fi1_A 135 --------------------------KRKPNPES--------------MLYLREKYQIS--SGLVIGDRPIDIEAGQAAG 172 (190)
T ss_dssp --------------------------CCTTSCHH--------------HHHHHHHTTCS--SEEEEESSHHHHHHHHHTT
T ss_pred --------------------------CCCCCHHH--------------HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcC
Confidence 13999999 99999999998 9999999999999999999
Q ss_pred CcEEEECCCC
Q 018946 315 MPCVVMRSRC 324 (348)
Q Consensus 315 ~~~i~v~~~~ 324 (348)
+.++++.++.
T Consensus 173 ~~~~~~~~~~ 182 (190)
T 2fi1_A 173 LDTHLFTSIV 182 (190)
T ss_dssp CEEEECSCHH
T ss_pred CeEEEECCCC
Confidence 9999998643
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=175.85 Aligned_cols=175 Identities=14% Similarity=0.070 Sum_probs=122.6
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcc---------cCcHHHHH----HHHhhH-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGDEDRML----VLFFNR- 147 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~---------~~~~~~~~----~~~~~~- 147 (348)
+.+|+|+||+||||+++... +..++.++++++|++ .+...+...+... ........ ......
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKT---FTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW 79 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCC---CCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence 35789999999999998875 778999999999987 4444333332211 00011110 000000
Q ss_pred -----HHHHHHHHh-cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhh
Q 018946 148 -----KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (348)
Q Consensus 148 -----~~~~~~~~~-~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~ 221 (348)
......+.. .....++||+.++|+.|++ |++++++||+ ....+...++. +..+|+.++.+. ++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~---~~~~~~~~l~~--l~~~fd~i~~~~-~~~--- 149 (240)
T 3smv_A 80 GLEPDAAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNI---DRNEFKLSNAK--LGVEFDHIITAQ-DVG--- 149 (240)
T ss_dssp TCCCCHHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESS---CHHHHHHHHTT--TCSCCSEEEEHH-HHT---
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCC---ChhHHHHHHHh--cCCccCEEEEcc-ccC---
Confidence 111111111 1235789999999999999 8999999995 45666666665 556777664332 221
Q ss_pred cccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHH---HHHcCCCCCcEE
Q 018946 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG---AEYAEKPVRNCF 298 (348)
Q Consensus 222 ~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a---~~~lgv~p~~~i 298 (348)
..||+|++ |+.+ ++++|++|++|+
T Consensus 150 ---------------------------------------~~KP~~~~--------------~~~~l~~~~~lgi~~~~~~ 176 (240)
T 3smv_A 150 ---------------------------------------SYKPNPNN--------------FTYMIDALAKAGIEKKDIL 176 (240)
T ss_dssp ---------------------------------------SCTTSHHH--------------HHHHHHHHHHTTCCGGGEE
T ss_pred ---------------------------------------CCCCCHHH--------------HHHHHHHHHhcCCCchhEE
Confidence 23999999 8888 899999999999
Q ss_pred EEecCH-hhHHHHHHcCCcEEEECCC
Q 018946 299 LIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~i~v~~~ 323 (348)
+|||+. +|+.+|+++|+.+|++..+
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~~~~~ 202 (240)
T 3smv_A 177 HTAESLYHDHIPANDAGLVSAWIYRR 202 (240)
T ss_dssp EEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred EECCCchhhhHHHHHcCCeEEEEcCC
Confidence 999996 9999999999999999865
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-23 Score=181.92 Aligned_cols=112 Identities=12% Similarity=0.124 Sum_probs=97.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+++|++++|+||+ ....+..+++.+|+..+|+.++.+. +..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~--------------------- 152 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNG---NPQMLEIAVKSAGMSGLFDHVLSVD-AVR--------------------- 152 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESS---CHHHHHHHHHTTTCTTTCSEEEEGG-GTT---------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCC---CHHHHHHHHHHCCcHhhcCEEEEec-ccC---------------------
Confidence 678999999999999999999999995 5678899999999999998764332 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 153 ---------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 153 ---------------------LYKTAPAA--------------YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp ---------------------CCTTSHHH--------------HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCcCHHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23999999 9999999999999999999999999999999999999
Q ss_pred ECCCCCCccccc
Q 018946 320 MRSRCITTLPVS 331 (348)
Q Consensus 320 v~~~~~~~~~l~ 331 (348)
+.++.+....+.
T Consensus 198 v~~~~~~~~~~~ 209 (233)
T 3umb_A 198 INRLGHPPEALD 209 (233)
T ss_dssp ECTTCCCCCSSS
T ss_pred EcCCCCCchhcc
Confidence 998877666553
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=179.55 Aligned_cols=175 Identities=14% Similarity=0.051 Sum_probs=122.8
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccC-------------cHHHHHH----HH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-------------DEDRMLV----LF 144 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~-------------~~~~~~~----~~ 144 (348)
+.+|+|+||+||||+++... +..++.++++++|++. ..........+.... ....... ..
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEV--DAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFV 89 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCC--CHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCC--CHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 45799999999999998775 7789999999999873 222222222221000 0000000 00
Q ss_pred hhH---------HHHHHHHHh-cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecc
Q 018946 145 FNR---------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (348)
Q Consensus 145 ~~~---------~~~~~~~~~-~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~ 214 (348)
... ......+.. .....++||+.++|+.|++. ++++++||+ ....+..+++.+|+. |+.++ +.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~~~--f~~~~-~~ 162 (254)
T 3umg_A 90 LRESGIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNG---NTSLLLDMAKNAGIP--WDVII-GS 162 (254)
T ss_dssp HHHTTCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSS---CHHHHHHHHHHHTCC--CSCCC-CH
T ss_pred HHHhCCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCC---CHHHHHHHHHhCCCC--eeEEE-Ec
Confidence 000 011111111 12457799999999999997 999999995 567888899999986 55442 22
Q ss_pred hhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC
Q 018946 215 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 294 (348)
Q Consensus 215 ~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p 294 (348)
+.+ ...||+|++ |+.+++++|++|
T Consensus 163 ~~~------------------------------------------~~~kp~~~~--------------~~~~~~~lgi~~ 186 (254)
T 3umg_A 163 DIN------------------------------------------RKYKPDPQA--------------YLRTAQVLGLHP 186 (254)
T ss_dssp HHH------------------------------------------TCCTTSHHH--------------HHHHHHHTTCCG
T ss_pred CcC------------------------------------------CCCCCCHHH--------------HHHHHHHcCCCh
Confidence 222 123999999 999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 295 RNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 295 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++|++|||+.+|+.+|+.+|+.++++..
T Consensus 187 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 187 GEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred HHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 9999999999999999999999999983
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-22 Score=180.90 Aligned_cols=179 Identities=17% Similarity=0.093 Sum_probs=125.9
Q ss_pred CCceEEEEecCCccccccc-cChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc------------------------
Q 018946 82 PRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD------------------------ 136 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~-~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~------------------------ 136 (348)
|.+|+|+||+||||+++.. . +..++.++++++|+. .....+....+.....
T Consensus 4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPT 79 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC
T ss_pred CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCC---CCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCC
Confidence 4578999999999999876 3 568999999999986 3333222222211000
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc-hheeecch
Q 018946 137 EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNE 215 (348)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f-~~~i~~~~ 215 (348)
..............+.+.+. ....++||+.++++.|+++|++++++||. ....+..+++.+|+..+| +.+ ++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~~~~~-~~~~ 154 (267)
T 1swv_A 80 EADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGY---TREMMDIVAKEAALQGYKPDFL-VTPD 154 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSS---CHHHHHHHHHHHHHTTCCCSCC-BCGG
T ss_pred HHHHHHHHHHHHHHHHHhhc-cccccCccHHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHcCCcccChHhe-ecCC
Confidence 00000000000111122222 23567999999999999999999999995 567788888888887775 543 2222
Q ss_pred hhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-
Q 018946 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 294 (348)
Q Consensus 216 e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p- 294 (348)
.+ . ..||+|++ |+.+++++|++|
T Consensus 155 ~~--------------~----------------------------~~kp~~~~--------------~~~~~~~lgi~~~ 178 (267)
T 1swv_A 155 DV--------------P----------------------------AGRPYPWM--------------CYKNAMELGVYPM 178 (267)
T ss_dssp GS--------------S----------------------------CCTTSSHH--------------HHHHHHHHTCCSG
T ss_pred cc--------------C----------------------------CCCCCHHH--------------HHHHHHHhCCCCC
Confidence 21 1 12999999 999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 295 RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 295 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
++|++|||+.+|+.+|+.+|+.+|+|..+..
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred cCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 9999999999999999999999999998765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.8e-22 Score=173.99 Aligned_cols=174 Identities=17% Similarity=0.221 Sum_probs=123.0
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccC--------------cHHHHHHHHhhHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG--------------DEDRMLVLFFNRKN 149 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~~~~~~ 149 (348)
+|+|+||+||||+++... +..++.++++++|... ++...+....+.... ..............
T Consensus 2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKND 78 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC--CCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Confidence 589999999999998876 7788999999998861 332222111111100 00100000000012
Q ss_pred HHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccc
Q 018946 150 ALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (348)
Q Consensus 150 ~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g 228 (348)
.+.+.+.. ....++||+.++|+.|++.|++++++||. ..+...++.+|+..+|+.++.+. ++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~~l~~~f~~~~~~~-~~----------- 141 (221)
T 2wf7_A 79 NYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPA-EV----------- 141 (221)
T ss_dssp HHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECCTT-TS-----------
T ss_pred HHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHHcChHHHcceEeccc-cC-----------
Confidence 23333222 13467899999999999999999999994 45677888999998887654322 11
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
. ..||+|++ |+.+++++|++|++|++|||+.+|+.
T Consensus 142 ---~----------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~nDi~ 176 (221)
T 2wf7_A 142 ---A----------------------------ASKPAPDI--------------FIAAAHAVGVAPSESIGLEDSQAGIQ 176 (221)
T ss_dssp ---S----------------------------SCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred ---C----------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEEeCCHHHHH
Confidence 1 13999999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECC
Q 018946 309 GAQRIGMPCVVMRS 322 (348)
Q Consensus 309 aA~~aG~~~i~v~~ 322 (348)
+|+.+|+.+++++.
T Consensus 177 ~a~~aG~~~~~~~~ 190 (221)
T 2wf7_A 177 AIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHTCEEEEESC
T ss_pred HHHHCCCEEEEECC
Confidence 99999999999964
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=173.40 Aligned_cols=110 Identities=14% Similarity=0.116 Sum_probs=94.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+. ++.
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~--------------------- 148 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHLLSVD-PVQ--------------------- 148 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEESG-GGT---------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHhcChHhhhheEEEec-ccC---------------------
Confidence 568999999999999999999999995 5678899999999999988765432 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 149 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 149 ---------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 13999999 9999999999999999999999999999999999999
Q ss_pred ECCCCCCccc
Q 018946 320 MRSRCITTLP 329 (348)
Q Consensus 320 v~~~~~~~~~ 329 (348)
+.++.+..+.
T Consensus 194 ~~~~~~~~~~ 203 (232)
T 1zrn_A 194 INRTGNVFEE 203 (232)
T ss_dssp ECTTCCCCCS
T ss_pred EcCCCCCccc
Confidence 9887654433
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=175.91 Aligned_cols=106 Identities=10% Similarity=0.202 Sum_probs=93.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+. ++.
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~~--------------------- 158 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNG---NDEMLQAALKASKLDRVLDSCLSAD-DLK--------------------- 158 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGG-GTT---------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHhcCcHHHcCEEEEcc-ccC---------------------
Confidence 678999999999999999999999995 5678899999999999998764332 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 159 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 159 ---------------------IYKPDPRI--------------YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 13999999 9999999999999999999999999999999999999
Q ss_pred ECCCCC
Q 018946 320 MRSRCI 325 (348)
Q Consensus 320 v~~~~~ 325 (348)
+.++..
T Consensus 204 v~~~~~ 209 (240)
T 2no4_A 204 INRQGN 209 (240)
T ss_dssp ECTTCC
T ss_pred ECCCCC
Confidence 988754
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=186.61 Aligned_cols=176 Identities=9% Similarity=0.030 Sum_probs=112.7
Q ss_pred CCceEEEEecCCcccccccc------ChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh---------
Q 018946 82 PRDLAVLLEVDGVLVDAYRF------GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------- 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~------~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------- 146 (348)
+++++||||+||||+|++.. .+...+.+.+.++|... ...+.+..+.+.............+.
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~ 106 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDS--PVSNILSQFHIDNKEQLQAHILELVAKDVKDPILK 106 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTS--HHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcH--HHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHH
Confidence 34789999999999998642 03345556666666531 11111111111000000000000000
Q ss_pred H--HHHHHHHHhc--CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc--C---------Ccccchhee
Q 018946 147 R--KNALDEFLAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G---------SERISKIKI 211 (348)
Q Consensus 147 ~--~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l--g---------l~~~f~~~i 211 (348)
. ...+.+.+.. ...+++||+.++|+. |++++|+||+ ....++.+++.+ | +.++|+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~---~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f 179 (253)
T 2g80_A 107 QLQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSG---SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYF 179 (253)
T ss_dssp HHHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSS---CHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEE
T ss_pred HHHHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCC---CHHHHHHHHHhhcccccccccccchHhhcceEE
Confidence 0 1123333332 235789999999998 9999999996 567788888876 4 555554332
Q ss_pred ecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC
Q 018946 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (348)
Q Consensus 212 ~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg 291 (348)
. . . +.| .||+|++ |+.+++++|
T Consensus 180 ~-~-~---------~~g---------------------------------~KP~p~~--------------~~~a~~~lg 201 (253)
T 2g80_A 180 D-I-N---------TSG---------------------------------KKTETQS--------------YANILRDIG 201 (253)
T ss_dssp C-H-H---------HHC---------------------------------CTTCHHH--------------HHHHHHHHT
T ss_pred e-e-e---------ccC---------------------------------CCCCHHH--------------HHHHHHHcC
Confidence 1 1 0 001 2999999 999999999
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 292 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 292 v~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
++|++|+||||+.+|+.+|+++||.+|++.+..
T Consensus 202 ~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~ 234 (253)
T 2g80_A 202 AKASEVLFLSDNPLELDAAAGVGIATGLASRPG 234 (253)
T ss_dssp CCGGGEEEEESCHHHHHHHHTTTCEEEEECCTT
T ss_pred CCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCC
Confidence 999999999999999999999999999997643
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-22 Score=175.40 Aligned_cols=125 Identities=14% Similarity=0.191 Sum_probs=100.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+++ ++++++||+ ....+...++.+|+..+|+.++.+ +++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~~~~~-~~~---------------------- 151 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDS---DTEQAMAFLDALGIKDLFDSITTS-EEA---------------------- 151 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEH-HHH----------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECC---CHHHHHHHHHHcCcHHHcceeEec-ccc----------------------
Confidence 56899999999999999 999999995 567888999999999999876432 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i 318 (348)
...||+|++ |+.+++++|++|++|++|||+. +|+.+|+.+|+.++
T Consensus 152 --------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (234)
T 3u26_A 152 --------------------GFFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (234)
T ss_dssp --------------------TBCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEE
Confidence 123999999 9999999999999999999997 99999999999999
Q ss_pred EECCCCCCcccccccccc---hhHHHHhhc
Q 018946 319 VMRSRCITTLPVSKTQRL---ADMLCRILK 345 (348)
Q Consensus 319 ~v~~~~~~~~~l~~~~~~---~d~l~~~l~ 345 (348)
++..+....+....+..+ .+++.+.+.
T Consensus 198 ~v~~~~~~~~~~~~a~~~~~~~~el~~~l~ 227 (234)
T 3u26_A 198 LLDRKGEKREFWDKCDFIVSDLREVIKIVD 227 (234)
T ss_dssp EECSSSTTGGGGGGCSEEESSTHHHHHHHH
T ss_pred EECCCCCccccccCCCEeeCCHHHHHHHHH
Confidence 999876554444444433 444444443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=176.54 Aligned_cols=176 Identities=13% Similarity=-0.038 Sum_probs=123.4
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHH---HHcCCCC--CCCC---HHHHHH--HHhcccCcHHHHHH----HHhh-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDC--ANWT---APIYTD--LLRKSAGDEDRMLV----LFFN- 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~---~~~gl~~--~~~~---~~~~~~--l~~~~~~~~~~~~~----~~~~- 146 (348)
|.+|+|+||+||||+|+... +..++.+++ .++|+.. ..+. ...+.. ..+........... ....
T Consensus 11 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred CceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 45799999999999999876 777888777 4667752 0111 111111 12221110000000 0000
Q ss_pred ---------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhh
Q 018946 147 ---------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (348)
Q Consensus 147 ---------~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~ 217 (348)
....+.+.+ .....+.||+.++|+.|+ +|++++|+||+ ....++..++.+|+..+|+.++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~i~~~---- 160 (251)
T 2pke_A 90 RIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKG---DLFHQEQKIEQSGLSDLFPRIEVV---- 160 (251)
T ss_dssp CCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEES---CHHHHHHHHHHHSGGGTCCCEEEE----
T ss_pred CCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCC---CHHHHHHHHHHcCcHHhCceeeee----
Confidence 012233333 234678999999999999 99999999995 567788899999999888765421
Q ss_pred hhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcE
Q 018946 218 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 297 (348)
Q Consensus 218 ~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~ 297 (348)
.||+|++ |+.+++++|++|++|
T Consensus 161 --------------------------------------------~kp~~~~--------------~~~~~~~l~~~~~~~ 182 (251)
T 2pke_A 161 --------------------------------------------SEKDPQT--------------YARVLSEFDLPAERF 182 (251)
T ss_dssp --------------------------------------------SCCSHHH--------------HHHHHHHHTCCGGGE
T ss_pred --------------------------------------------CCCCHHH--------------HHHHHHHhCcCchhE
Confidence 1899999 999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCcEEEECCCCC
Q 018946 298 FLIAGSQ-SGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 298 i~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 325 (348)
++|||+. +|+.+|+++|+.+|++.++..
T Consensus 183 i~iGD~~~~Di~~a~~aG~~~~~v~~~~~ 211 (251)
T 2pke_A 183 VMIGNSLRSDVEPVLAIGGWGIYTPYAVT 211 (251)
T ss_dssp EEEESCCCCCCHHHHHTTCEEEECCCC--
T ss_pred EEECCCchhhHHHHHHCCCEEEEECCCCc
Confidence 9999999 999999999999999987654
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-22 Score=174.88 Aligned_cols=174 Identities=13% Similarity=0.118 Sum_probs=119.3
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHH--------hcccCcHHHHHHHHhhH------H
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL--------RKSAGDEDRMLVLFFNR------K 148 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~------~ 148 (348)
++++|+||+||||+|+... + +..++.++|++. .......+. ................. .
T Consensus 4 m~k~iiFDlDGTL~d~~~~-~---~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 76 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNRE-E---SIRRFKAIGVAD---IEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTY 76 (211)
T ss_dssp CCSEEEECSBTTTEEECHH-H---HHHHHHHTTCTT---HHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCH
T ss_pred cceEEEEeCCCeeEecchH-H---HHHHHHHhCCch---HHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCH
Confidence 4789999999999998853 2 266777778752 111111111 00000111111111000 1
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH------cCCcccchheeecchhhhhhhc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK------LGSERISKIKIVGNEEVERSLY 222 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~------lgl~~~f~~~i~~~~e~~~~~~ 222 (348)
..+.+.+......++||+.++|+.|++ |++++|+||+ ....+..+++. +|+..+|+.++.+. ++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~---~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~-~~----- 146 (211)
T 2i6x_A 77 QQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNT---NPYVLDLAMSPRFLPSGRTLDSFFDKVYASC-QM----- 146 (211)
T ss_dssp HHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECC---CHHHHHHHTSTTSSTTCCCGGGGSSEEEEHH-HH-----
T ss_pred HHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCC---CHHHHHHHHhhhccccccCHHHHcCeEEeec-cc-----
Confidence 112222222234678999999999999 9999999995 56777788887 79988888764332 22
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 223 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
+..||+|++ |+.+++++|++|++|++|||
T Consensus 147 -------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~igD 175 (211)
T 2i6x_A 147 -------------------------------------GKYKPNEDI--------------FLEMIADSGMKPEETLFIDD 175 (211)
T ss_dssp -------------------------------------TCCTTSHHH--------------HHHHHHHHCCCGGGEEEECS
T ss_pred -------------------------------------CCCCCCHHH--------------HHHHHHHhCCChHHeEEeCC
Confidence 123999999 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcEEEECCCC
Q 018946 303 SQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 303 s~~Di~aA~~aG~~~i~v~~~~ 324 (348)
+.+|+.+|+++|+.+|++.++.
T Consensus 176 ~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 176 GPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp CHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHcCCEEEEECCHH
Confidence 9999999999999999998654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=182.18 Aligned_cols=174 Identities=13% Similarity=0.040 Sum_probs=123.9
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH----------HHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----------KNALD 152 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~~ 152 (348)
.+++|+||+||||+++... +..+|.++++++|+. .....+....+. ............ ...+.
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPYF---DAEHVIHISHGW---RTYDAIAKFAPDFADEEYVNKLEGEIP 106 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTTC---CHHHHHHHCTTC---CHHHHHHHHCGGGCCHHHHHHHHHTHH
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCCC---CHHHHHHHhcCC---CHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 3689999999999999876 778899999888831 111111111111 111111111000 11222
Q ss_pred HHHhcCCCCCCCcHHHHHHHHHHC-CCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccc
Q 018946 153 EFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (348)
Q Consensus 153 ~~~~~~~~~l~pGv~elL~~Lk~~-Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v 231 (348)
+.+. ....+.||+.++|+.|+++ |++++++||. ....+...++.+|+.. |+.++ +.+++
T Consensus 107 ~~~~-~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~---~~~~~~~~l~~~~l~~-f~~i~-~~~~~-------------- 166 (275)
T 2qlt_A 107 EKYG-EHSIEVPGAVKLCNALNALPKEKWAVATSG---TRDMAKKWFDILKIKR-PEYFI-TANDV-------------- 166 (275)
T ss_dssp HHHC-TTCEECTTHHHHHHHHHTSCGGGEEEECSS---CHHHHHHHHHHHTCCC-CSSEE-CGGGC--------------
T ss_pred HHHh-cCCCcCcCHHHHHHHHHhccCCeEEEEeCC---CHHHHHHHHHHcCCCc-cCEEE-EcccC--------------
Confidence 2222 3356799999999999999 9999999995 5678888999999864 55443 33222
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCC-------CCCcEEEEecCH
Q 018946 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-------PVRNCFLIAGSQ 304 (348)
Q Consensus 232 ~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv-------~p~~~i~VGDs~ 304 (348)
. ..||+|++ |+.+++++|+ +|++|++|||+.
T Consensus 167 ~----------------------------~~kp~~~~--------------~~~~~~~lgi~~~~~~~~~~~~i~~GDs~ 204 (275)
T 2qlt_A 167 K----------------------------QGKPHPEP--------------YLKGRNGLGFPINEQDPSKSKVVVFEDAP 204 (275)
T ss_dssp S----------------------------SCTTSSHH--------------HHHHHHHTTCCCCSSCGGGSCEEEEESSH
T ss_pred C----------------------------CCCCChHH--------------HHHHHHHcCCCccccCCCcceEEEEeCCH
Confidence 1 12999999 9999999999 999999999999
Q ss_pred hhHHHHHHcCCcEEEECCCCC
Q 018946 305 SGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 305 ~Di~aA~~aG~~~i~v~~~~~ 325 (348)
+|+.+|+++|+.+|+|.++.+
T Consensus 205 nDi~~a~~AG~~~i~v~~~~~ 225 (275)
T 2qlt_A 205 AGIAAGKAAGCKIVGIATTFD 225 (275)
T ss_dssp HHHHHHHHTTCEEEEESSSSC
T ss_pred HHHHHHHHcCCEEEEECCCCC
Confidence 999999999999999998754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=172.10 Aligned_cols=175 Identities=16% Similarity=0.136 Sum_probs=126.0
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCC-HHHHHHHHhcccCcHHHHHHHHhh----------HHHHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT-APIYTDLLRKSAGDEDRMLVLFFN----------RKNAL 151 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~ 151 (348)
++|+|+||+||||+++... +..++.++++++|++ .. ...+....+.............++ ....+
T Consensus 3 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLL 78 (229)
T ss_dssp CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 3689999999999998876 778899999999986 34 333333333221111010000000 01122
Q ss_pred HHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccc-hheeecchhhhhhhccccccccc
Q 018946 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEVERSLYGQFVLGKG 230 (348)
Q Consensus 152 ~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f-~~~i~~~~e~~~~~~~~~v~g~~ 230 (348)
.+.+. ....++||+.++|+.++. +++++||+ ....++.+++.+|+..+| +.+ ++.+.+
T Consensus 79 ~~~~~-~~~~~~~~~~~~l~~l~~---~~~i~s~~---~~~~~~~~l~~~~l~~~~~~~~-~~~~~~------------- 137 (229)
T 2fdr_A 79 DMRLE-RDVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPHI-YSAKDL------------- 137 (229)
T ss_dssp HHHHH-HHCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTCE-EEHHHH-------------
T ss_pred HHHhh-cCCccCcCHHHHHHHhCC---CEEEEECC---ChhHHHHHHHhCChHHhccceE-Eecccc-------------
Confidence 22221 235679999999998874 99999995 567888999999999988 654 333322
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 018946 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASML--KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (348)
Q Consensus 231 v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~--KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~ 308 (348)
... ||+|++ |+.+++++|++|++|++|||+.+|+.
T Consensus 138 -----------------------------~~~~~kpk~~~--------------~~~~~~~l~~~~~~~i~iGD~~~Di~ 174 (229)
T 2fdr_A 138 -----------------------------GADRVKPKPDI--------------FLHGAAQFGVSPDRVVVVEDSVHGIH 174 (229)
T ss_dssp -----------------------------CTTCCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHH
T ss_pred -----------------------------ccCCCCcCHHH--------------HHHHHHHcCCChhHeEEEcCCHHHHH
Confidence 235 899999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCC
Q 018946 309 GAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 309 aA~~aG~~~i~v~~~~~ 325 (348)
+|+.+|+.+|++.++..
T Consensus 175 ~a~~aG~~~i~~~~~~~ 191 (229)
T 2fdr_A 175 GARAAGMRVIGFTGASH 191 (229)
T ss_dssp HHHHTTCEEEEECCSTT
T ss_pred HHHHCCCEEEEEecCCc
Confidence 99999999999988654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=172.61 Aligned_cols=113 Identities=15% Similarity=0.251 Sum_probs=96.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++|+||+..+....+..+++.+|+..+|+.++.+.+.+...
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------------- 93 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG------------------- 93 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT-------------------
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc-------------------
Confidence 6789999999999999999999999974333488999999999999999776544321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCV 318 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i 318 (348)
...||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||.+|
T Consensus 94 --------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 94 --------------------KMEKPDKTI--------------FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp --------------------CCCTTSHHH--------------HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 023999999 999999999999999999999 799999999999999
Q ss_pred EECCCCC
Q 018946 319 VMRSRCI 325 (348)
Q Consensus 319 ~v~~~~~ 325 (348)
++.++..
T Consensus 140 ~v~~~~~ 146 (189)
T 3ib6_A 140 WLQNPEV 146 (189)
T ss_dssp EECCTTT
T ss_pred EECCccc
Confidence 9998765
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-22 Score=175.35 Aligned_cols=177 Identities=11% Similarity=0.147 Sum_probs=115.3
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHH--------hcccCcHHHHHHHHhhH------
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL--------RKSAGDEDRMLVLFFNR------ 147 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~------ 147 (348)
+.+++|+||+||||+++.. ..+...+.++|... ..+...... .................
T Consensus 5 ~~~k~viFDlDGTL~d~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 77 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDIDF----NRVLGAWSDLTRIP---LASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLS 77 (206)
T ss_dssp -CCCEEEECCBTTTEEEET----HHHHHHHHHHHCCC---HHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCC
T ss_pred ccccEEEEcCCCeeecCcH----HHHHHHHHHhcCCC---HHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCC
Confidence 3578999999999999873 23344555555541 122222111 11101111111111000
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecchhhhhhhccccc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFV 226 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~e~~~~~~~~~v 226 (348)
...+.+.+......++||+.++|+.|+++|++++|+||+. ...+..+++. +|+..+|+.++.+. ++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~~~~~~~l~~~f~~~~~~~-~~--------- 144 (206)
T 2b0c_A 78 YEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEIRDAADHIYLSQ-DL--------- 144 (206)
T ss_dssp HHHHHHHHHTCEEEECHHHHHHHHHHHHTTCEEEEEECCC---CCTTSCCGGGCHHHHHHCSEEEEHH-HH---------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHCCCeEEEEECCC---hHHHHHHHHhccChhhheeeEEEec-cc---------
Confidence 1122232333235689999999999999999999999963 3444444555 67777777654322 21
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 018946 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (348)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~D 306 (348)
...||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 145 ---------------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~D 177 (206)
T 2b0c_A 145 ---------------------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADN 177 (206)
T ss_dssp ---------------------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHH
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHH
Confidence 123999999 999999999999999999999999
Q ss_pred HHHHHHcCCcEEEECCCCC
Q 018946 307 VAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~~~ 325 (348)
+.+|+++|+.++++.++..
T Consensus 178 i~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 178 IEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHcCCeEEEecCCch
Confidence 9999999999999987543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=166.83 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=88.5
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|+++ ++++++||+.. . ++.+|+..+|+.++.+. ++
T Consensus 103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~-----l~~~~l~~~f~~~~~~~-~~--------------------- 151 (230)
T 3vay_A 103 QVQIFPEVQPTLEILAKT-FTLGVITNGNA---D-----VRRLGLADYFAFALCAE-DL--------------------- 151 (230)
T ss_dssp CCCBCTTHHHHHHHHHTT-SEEEEEESSCC---C-----GGGSTTGGGCSEEEEHH-HH---------------------
T ss_pred cCccCcCHHHHHHHHHhC-CeEEEEECCch---h-----hhhcCcHHHeeeeEEcc-cc---------------------
Confidence 467899999999999998 99999999632 2 67889999998764322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
+..||+|++ |+.+++++|++|++|++|||+. +|+.+|+++|+.+
T Consensus 152 ---------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~ 196 (230)
T 3vay_A 152 ---------------------GIGKPDPAP--------------FLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRA 196 (230)
T ss_dssp ---------------------TCCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEE
T ss_pred ---------------------CCCCcCHHH--------------HHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEE
Confidence 123999999 9999999999999999999998 9999999999999
Q ss_pred EEECCCCCCccc
Q 018946 318 VVMRSRCITTLP 329 (348)
Q Consensus 318 i~v~~~~~~~~~ 329 (348)
+++.++......
T Consensus 197 ~~v~~~~~~~~~ 208 (230)
T 3vay_A 197 IWYNPQGKAWDA 208 (230)
T ss_dssp EEECTTCCCCCS
T ss_pred EEEcCCCCCCcc
Confidence 999987765443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=173.79 Aligned_cols=180 Identities=10% Similarity=0.113 Sum_probs=112.6
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh----HHHHHHHHHhcC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----RKNALDEFLASK 158 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 158 (348)
.+++|+||+||||+|++.. .++++.+|+.. ...+.+....+.... ........+. ....+.+++...
T Consensus 13 ~~k~viFD~DGTLvd~~~~------~~~~~~~g~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T 1nnl_A 13 SADAVCFDVDSTVIREEGI------DELAKICGVED--AVSEMTRRAMGGAVP-FKAALTERLALIQPSREQVQRLIAEQ 83 (225)
T ss_dssp HCSEEEEETBTTTBSSCHH------HHHHHHTTCTT--TC------------C-HHHHHHHHHHHHCCCHHHHHHHHHHS
T ss_pred hCCEEEEeCcccccccccH------HHHHHHhCCcH--HHHHHHHHHHcCCcc-HHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence 4689999999999998753 57788888762 122223232221111 1111111110 123445555444
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--ccchheeecchhhhhhhcccccccccccCCch
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+. ++|+..+... ++.++.+........
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~~~f~~~~~~~-------~~~~~~~~~~~~~~~ 153 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGG---FRSIVEHVASKLNIPATNVFANRLKFY-------FNGEYAGFDETQPTA 153 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCCGGGEEEECEEEC-------TTSCEEEECTTSGGG
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCC---hHHHHHHHHHHcCCCcccEEeeeEEEc-------CCCcEecCCCCCccc
Confidence 5678999999999999999999999995 678889999999997 4776543100 001111111100000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
..||.|++ |+.+++++|+ ++|++|||+.+|+.+|+++|+
T Consensus 154 ------------------------~~~~Kp~~--------------~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~- 192 (225)
T 1nnl_A 154 ------------------------ESGGKGKV--------------IKLLKEKFHF--KKIIMIGDGATDMEACPPADA- 192 (225)
T ss_dssp ------------------------STTHHHHH--------------HHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-
T ss_pred ------------------------CCCchHHH--------------HHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-
Confidence 00222334 8999999998 799999999999999999999
Q ss_pred EEEECC
Q 018946 317 CVVMRS 322 (348)
Q Consensus 317 ~i~v~~ 322 (348)
+|++..
T Consensus 193 ~i~~~~ 198 (225)
T 1nnl_A 193 FIGFGG 198 (225)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 888864
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=166.44 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=90.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.+ |+.|+++ ++++|+||+ ....++.+++.+|+..+|+.++. ++++.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~~--------------------- 125 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNG---SINEVKQHLERNGLLRYFKGIFS-AESVK--------------------- 125 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEE-GGGGT---------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCc---CHHHHHHHHHHCCcHHhCcEEEe-hhhcC---------------------
Confidence 578999999 9999999 999999995 56788899999999999987643 32221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++| |++|++|||+.+|+.+|+++|+.+++
T Consensus 126 ---------------------~~Kp~~~~--------------~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 126 ---------------------EYKPSPKV--------------YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp ---------------------CCTTCHHH--------------HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 23999999 999999999 99999999999999999999999999
Q ss_pred ECCCCCCcc
Q 018946 320 MRSRCITTL 328 (348)
Q Consensus 320 v~~~~~~~~ 328 (348)
+.++.+...
T Consensus 169 ~~~~~~~~~ 177 (201)
T 2w43_A 169 VNRKNTIVD 177 (201)
T ss_dssp ECSSSCCCC
T ss_pred ECCCCCCcc
Confidence 988665433
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.8e-21 Score=176.63 Aligned_cols=181 Identities=14% Similarity=0.131 Sum_probs=121.1
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHH-----cCCCCCCCCHHHHHHHHhc---ccCcHHHHHHHHhh-HHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-----LGLDCANWTAPIYTDLLRK---SAGDEDRMLVLFFN-RKNALD 152 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~-----~gl~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~-~~~~~~ 152 (348)
+.+|+|+||+||||+++... +...+.+++.+ .|++ ......+... ..+..........+ ....+.
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 128 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS-----PEDAHVLNNSYYKEYGLAIRGLVMFHKVNALEYN 128 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC-----HHHHHHHHHHHHHHTHHHHHHHHHTTSSCHHHHH
T ss_pred CCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHH
Confidence 45789999999999998654 44555555544 2543 2221111110 00000000000000 012222
Q ss_pred HHHhc-----CCCCCCCcHHHHHHHHHHCCC--cEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccc
Q 018946 153 EFLAS-----KDAPLRPGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 153 ~~~~~-----~~~~l~pGv~elL~~Lk~~Gi--~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
+.+.. ....++||+.++|+.|+++|+ +++|+||+ ....++..++.+|+..+|+.++.+....
T Consensus 129 ~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~---~~~~~~~~l~~~gl~~~fd~v~~~~~~~-------- 197 (282)
T 3nuq_A 129 RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNA---YKNHAIRCLRLLGIADLFDGLTYCDYSR-------- 197 (282)
T ss_dssp HHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSS---CHHHHHHHHHHHTCTTSCSEEECCCCSS--------
T ss_pred HHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECC---ChHHHHHHHHhCCcccccceEEEeccCC--------
Confidence 22221 236789999999999999999 99999995 5688899999999999998765332111
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-CcEEEEecCH
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQ 304 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p-~~~i~VGDs~ 304 (348)
..+. ..||+|++ |+.+++++|++| ++|++|||+.
T Consensus 198 ---~~~~----------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 198 ---TDTL----------------------------VCKPHVKA--------------FEKAMKESGLARYENAYFIDDSG 232 (282)
T ss_dssp ---CSSC----------------------------CCTTSHHH--------------HHHHHHHHTCCCGGGEEEEESCH
T ss_pred ---Cccc----------------------------CCCcCHHH--------------HHHHHHHcCCCCcccEEEEcCCH
Confidence 1111 23999999 999999999999 9999999999
Q ss_pred hhHHHHHHcCC-cEEEECCCC
Q 018946 305 SGVAGAQRIGM-PCVVMRSRC 324 (348)
Q Consensus 305 ~Di~aA~~aG~-~~i~v~~~~ 324 (348)
+|+.+|+++|| .++++..+.
T Consensus 233 ~Di~~a~~aG~~~~~~~~~~~ 253 (282)
T 3nuq_A 233 KNIETGIKLGMKTCIHLVENE 253 (282)
T ss_dssp HHHHHHHHHTCSEEEEECSCC
T ss_pred HHHHHHHHCCCeEEEEEcCCc
Confidence 99999999999 566676554
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-21 Score=173.00 Aligned_cols=169 Identities=15% Similarity=0.148 Sum_probs=118.6
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHH---HHHHHhccc-CcHHHHHHHHhhH----------
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDLLRKSA-GDEDRMLVLFFNR---------- 147 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~---~~~l~~~~~-~~~~~~~~~~~~~---------- 147 (348)
+++++|+||+||||+|+... +..+|+++++++|++ ..... +..+....+ .........+...
T Consensus 9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQ---NSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLM 84 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHH---HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGGG
T ss_pred CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHHH
Confidence 35689999999999999887 788999999999875 22211 222221111 1111111111100
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
...+.++. ...+++||+.++|+.|+++| +++|+||+ ....++.+++.+|+.++|+..+...
T Consensus 85 ~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~---~~~~~~~~l~~~gl~~~f~~~~~~~------------- 145 (231)
T 2p11_A 85 SSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDG---DVVFQPRKIARSGLWDEVEGRVLIY------------- 145 (231)
T ss_dssp HHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEEC---CSSHHHHHHHHTTHHHHTTTCEEEE-------------
T ss_pred HHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCC---CHHHHHHHHHHcCcHHhcCeeEEec-------------
Confidence 11222211 23578999999999999999 99999996 5678899999999998887543100
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh--
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-- 305 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~-- 305 (348)
++.|.+ ++.+++ |++|++|+||||+.+
T Consensus 146 -----------------------------------~~K~~~--------------~~~~~~--~~~~~~~~~vgDs~~d~ 174 (231)
T 2p11_A 146 -----------------------------------IHKELM--------------LDQVME--CYPARHYVMVDDKLRIL 174 (231)
T ss_dssp -----------------------------------SSGGGC--------------HHHHHH--HSCCSEEEEECSCHHHH
T ss_pred -----------------------------------CChHHH--------------HHHHHh--cCCCceEEEEcCccchh
Confidence 222455 776666 789999999999999
Q ss_pred -hHHHHHHcCCcEEEECCCC
Q 018946 306 -GVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 306 -Di~aA~~aG~~~i~v~~~~ 324 (348)
|+.+|+++||++|++.++.
T Consensus 175 ~di~~A~~aG~~~i~v~~g~ 194 (231)
T 2p11_A 175 AAMKKAWGARLTTVFPRQGH 194 (231)
T ss_dssp HHHHHHHGGGEEEEEECCSS
T ss_pred hhhHHHHHcCCeEEEeCCCC
Confidence 9999999999999998874
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-21 Score=166.97 Aligned_cols=128 Identities=10% Similarity=0.041 Sum_probs=95.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC----C--------chHHHHHHHHcC--Ccccchheeecchhhhhhhcccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLG--SERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~----~--------~~~~~~il~~lg--l~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
..++||+.++|+.|+++|++++|+||+... . ...+...++.+| ++.+|...+.+.++.
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-------- 97 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGC-------- 97 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCC--------
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCC--------
Confidence 578999999999999999999999996310 0 045677888888 555443322111111
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
. .+||+|++ |+.+++++|++|++|+||||+.+
T Consensus 98 ------~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~ 129 (179)
T 3l8h_A 98 ------A----------------------------CRKPLPGM--------------YRDIARRYDVDLAGVPAVGDSLR 129 (179)
T ss_dssp ------S----------------------------SSTTSSHH--------------HHHHHHHHTCCCTTCEEEESSHH
T ss_pred ------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHH
Confidence 1 23999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCcccc----cccccchhHHHHh
Q 018946 306 GVAGAQRIGMPCVVMRSRCITTLPV----SKTQRLADMLCRI 343 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~~~l----~~~~~~~d~l~~~ 343 (348)
|+.+|+++||.+|+|.++......+ ..++.+++++-+.
T Consensus 130 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el 171 (179)
T 3l8h_A 130 DLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV 171 (179)
T ss_dssp HHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred HHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence 9999999999999999887655443 3334444444433
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=168.00 Aligned_cols=101 Identities=12% Similarity=0.129 Sum_probs=89.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+ |++++|+||+ ....++.+++.+|+..+|+.++.+. ++.
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~~~~~~-~~~--------------------- 144 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNG---APDMLQALVANAGLTDSFDAVISVD-AKR--------------------- 144 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGG-GGT---------------------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCc---CHHHHHHHHHHCCchhhccEEEEcc-ccC---------------------
Confidence 578999999999999 9999999995 5678889999999999998764332 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 145 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~ 189 (253)
T 1qq5_A 145 ---------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVAR 189 (253)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEE
Confidence 13999999 9999999999999999999999999999999999999
Q ss_pred ECC
Q 018946 320 MRS 322 (348)
Q Consensus 320 v~~ 322 (348)
+.+
T Consensus 190 ~~~ 192 (253)
T 1qq5_A 190 VAR 192 (253)
T ss_dssp ECC
T ss_pred ECC
Confidence 987
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=184.67 Aligned_cols=177 Identities=14% Similarity=0.104 Sum_probs=118.0
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhc-----------ccCcHHHHHHHHhh----
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK-----------SAGDEDRMLVLFFN---- 146 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~---- 146 (348)
|.+|+|+||+||||++... ...+..++...++.. ... ...+... ..............
T Consensus 1 M~~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAV---FGVLGRTEEALALPR---GLL-NDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRK 73 (555)
T ss_dssp ---CEEEECTBTTTEESCT---HHHHHHHHHHTTCCT---THH-HHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCeeecchh---HHHHHHHHHHhCCcH---HHH-HHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999998774 377888888888762 111 1111110 00111111111000
Q ss_pred --------------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc--CCcccchhe
Q 018946 147 --------------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--GSERISKIK 210 (348)
Q Consensus 147 --------------~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l--gl~~~f~~~ 210 (348)
....+.+.... ..++||+.++|+.|+++|++++|+||+.. ........+..+ |+..+|+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~~~~~~~~~~l~~~fd~i 150 (555)
T 3i28_A 74 CSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQLMCELKMHFDFL 150 (555)
T ss_dssp HHHHTTCCCCTTCCHHHHHHHHHHH--CEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHHHHHHHTTSSEE
T ss_pred hhhccCCCCCccccHHHHHHHhHhh--cCcChhHHHHHHHHHHCCCEEEEEeCCCc-cccchhhHHHHHhhhhhhheeEE
Confidence 12223333322 57899999999999999999999999611 112223334433 788888876
Q ss_pred eecchhhhhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc
Q 018946 211 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 290 (348)
Q Consensus 211 i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l 290 (348)
+. ++++. ..||+|++ |+.+++++
T Consensus 151 ~~-~~~~~------------------------------------------~~KP~p~~--------------~~~~~~~l 173 (555)
T 3i28_A 151 IE-SCQVG------------------------------------------MVKPEPQI--------------YKFLLDTL 173 (555)
T ss_dssp EE-HHHHT------------------------------------------CCTTCHHH--------------HHHHHHHH
T ss_pred Ee-ccccC------------------------------------------CCCCCHHH--------------HHHHHHHc
Confidence 43 33332 23999999 99999999
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 291 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 291 gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
|++|++|+||||+.+||.+|+++||.+|++.++..
T Consensus 174 g~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~ 208 (555)
T 3i28_A 174 KASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 208 (555)
T ss_dssp TCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred CCChhHEEEECCcHHHHHHHHHcCCEEEEECCCcc
Confidence 99999999999999999999999999999987544
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=166.71 Aligned_cols=110 Identities=9% Similarity=0.097 Sum_probs=89.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++...+.. +.+.+.+. +..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~~~~~~~~~----~~~~~~~~-~~~------ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGG---FDLATNHYRDLLHLDAAFSNTLIVENDA----LNGLVTGH-MMF------ 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEE---EHHHHHHHHHHHTCSEEEEEEEEEETTE----EEEEEEES-CCS------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCC---chhHHHHHHHHcCcchhccceeEEeCCE----EEeeeccC-CCC------
Confidence 679999999999999999999999995 6788999999999999998765433211 11111111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 140 ----------------------~k~k~~~--------------~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 140 ----------------------SHSKGEM--------------LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp ----------------------TTHHHHH--------------HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred ----------------------CCChHHH--------------HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 2777777 9999999999999999999999999999999999877
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-20 Score=165.18 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+++|++++|+||. ....+ ++.++ .+|+.++. . +.+..
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~---~~~~~---~~~~~--~~~d~v~~-~--------------~~~~~------ 85 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDEL---PEALS---TPLAA--PVNDWMIA-A--------------PRPTA------ 85 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCS---CHHHH---HHHHT--TTTTTCEE-C--------------CCCSS------
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCC---hHHHH---HHhcC--ccCCEEEE-C--------------CcCCC------
Confidence 568999999999999999999999995 34443 33333 34554432 2 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCcEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
+||+|++ |..+++++|+.| ++|+||||+.+||.+|+++||.+|
T Consensus 86 ----------------------~KP~p~~--------------~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i 129 (196)
T 2oda_A 86 ----------------------GWPQPDA--------------CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129 (196)
T ss_dssp ----------------------CTTSTHH--------------HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCChHH--------------HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEE
Confidence 2999999 999999999976 899999999999999999999999
Q ss_pred EECCCCC
Q 018946 319 VMRSRCI 325 (348)
Q Consensus 319 ~v~~~~~ 325 (348)
+|.++..
T Consensus 130 ~v~~g~~ 136 (196)
T 2oda_A 130 GLASCGP 136 (196)
T ss_dssp EESSSST
T ss_pred EEccCCc
Confidence 9998764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-20 Score=176.32 Aligned_cols=178 Identities=10% Similarity=0.067 Sum_probs=120.6
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh-----HHHHHHHHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----RKNALDEFL 155 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 155 (348)
.+..++|+||+||||++++.. ..+.+.+|+.. ............. ..........+. ....+.++.
T Consensus 105 ~~~~kaviFDlDGTLid~~~~------~~la~~~g~~~--~~~~~~~~~~~g~-~~~~~~l~~~~~~l~~~~~~~i~~~~ 175 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV------DEIARELGMST--QITAITQQAMEGK-LDFNASFTRRIGMLKGTPKAVLNAVC 175 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH------HHHHHHTTCHH--HHHHHHHHHHTTS-SCHHHHHHHHHHTTTTCBHHHHHHHH
T ss_pred CCCCCEEEEcCCCCccCCccH------HHHHHHhCCcH--HHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 456789999999999998753 44555666631 1112222222111 111111111110 023333433
Q ss_pred hcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 156 ~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
. ..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+..+...+. .+.+.+.+...
T Consensus 176 ~--~~~l~pg~~e~L~~Lk~~G~~v~IvSn~---~~~~~~~~l~~lgl~~~f~~~l~~~dg----~~tg~i~~~~~---- 242 (317)
T 4eze_A 176 D--RMTLSPGLLTILPVIKAKGFKTAIISGG---LDIFTQRLKARYQLDYAFSNTVEIRDN----VLTDNITLPIM---- 242 (317)
T ss_dssp H--TCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHHTCSEEEEECEEEETT----EEEEEECSSCC----
T ss_pred h--CCEECcCHHHHHHHHHhCCCEEEEEeCc---cHHHHHHHHHHcCCCeEEEEEEEeeCC----eeeeeEecccC----
Confidence 2 3679999999999999999999999995 789999999999999999876543221 12222222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
.+||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+
T Consensus 243 -------------------------~~kpkp~~--------------~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~ 283 (317)
T 4eze_A 243 -------------------------NAANKKQT--------------LVDLAARLNIATENIIACGDGANDLPMLEHAGT 283 (317)
T ss_dssp -------------------------CHHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred -------------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCC
Confidence 12677777 999999999999999999999999999999999
Q ss_pred cEEE
Q 018946 316 PCVV 319 (348)
Q Consensus 316 ~~i~ 319 (348)
.+++
T Consensus 284 ~va~ 287 (317)
T 4eze_A 284 GIAW 287 (317)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8777
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.9e-19 Score=157.40 Aligned_cols=186 Identities=12% Similarity=0.091 Sum_probs=115.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCC-C-CCCC---HHHHHHHHhcccCcHHHHHHHHhhH---------H
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-C-ANWT---APIYTDLLRKSAGDEDRMLVLFFNR---------K 148 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~-~-~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~---------~ 148 (348)
.+++|+||+||||+|++.. ..|.+.+...++. . ..+. ...+..... ............... .
T Consensus 3 ~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 78 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSD---YQWADFLARTGRAGDPAEARRRNDDLMERYNR-GELTAEQAAEFMLGLLAAHSPVELA 78 (232)
T ss_dssp CCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHHTSCHHHHH
T ss_pred CCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCCccHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHhcCCCHHHHH
Confidence 4689999999999999864 5777777776653 0 0000 011111111 111111111111000 1
Q ss_pred HHHHHHHhcC-CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 149 NALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 149 ~~~~~~~~~~-~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
..+.+++... ...++||+.++|+.|+++|++++|+||+ ....++.+++.+|++.++...+...+.. + .
T Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~----~ 147 (232)
T 3fvv_A 79 AWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTAT---NSFVTAPIARAFGVQHLIATDPEYRDGR----Y----T 147 (232)
T ss_dssp HHHHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCCEEEECEEEEETTE----E----E
T ss_pred HHHHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCCEEEEcceEEECCE----E----e
Confidence 2222322221 1157999999999999999999999995 6799999999999987776554322111 1 1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC---CCCCcEEEEecCH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGSQ 304 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg---v~p~~~i~VGDs~ 304 (348)
| ||.+.. ...++++ ..++.+++++| ++|++|++|||+.
T Consensus 148 g----------------------------------~~~~~~--~~~~~K~---~~~~~~~~~~~~~~~~~~~~~~vGDs~ 188 (232)
T 3fvv_A 148 G----------------------------------RIEGTP--SFREGKV---VRVNQWLAGMGLALGDFAESYFYSDSV 188 (232)
T ss_dssp E----------------------------------EEESSC--SSTHHHH---HHHHHHHHHTTCCGGGSSEEEEEECCG
T ss_pred e----------------------------------eecCCC--CcchHHH---HHHHHHHHHcCCCcCchhheEEEeCCH
Confidence 1 222111 0011222 22788999999 9999999999999
Q ss_pred hhHHHHHHcCCcEEEECC
Q 018946 305 SGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 305 ~Di~aA~~aG~~~i~v~~ 322 (348)
+|+.+++.+|+.+++.++
T Consensus 189 ~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 189 NDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp GGHHHHHHSSEEEEESCC
T ss_pred hhHHHHHhCCCeEEECcC
Confidence 999999999999877543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=159.39 Aligned_cols=166 Identities=14% Similarity=0.126 Sum_probs=113.2
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCC---CCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCAN---WTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDA 160 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (348)
+++|+||+||||+| .+|+++++++|++... .....+...++.. ...+...... ...+.+++ ...
T Consensus 2 ~k~viFD~DGTL~d-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~--~~~ 68 (206)
T 1rku_A 2 MEIACLDLEGVLVP-------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR---LRILDEHGLK-LGDIQEVI--ATL 68 (206)
T ss_dssp CEEEEEESBTTTBC-------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH---HHHHHHTTCC-HHHHHHHH--TTC
T ss_pred CcEEEEccCCcchh-------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH---HHHHHHCCCC-HHHHHHHH--Hhc
Confidence 57999999999999 3567888888876200 0111112222111 0000000000 12333333 246
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++||+.++|+.|+++ ++++|+||+ ....++.+++.+|+..+|...++.++++.. .+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~-------~~------------ 125 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDT---FYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------VG------------ 125 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEE---EHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------EE------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECC---hHHHHHHHHHHcCCcceecceeEEcCCceE-------Ee------------
Confidence 7899999999999999 999999995 678899999999999988432222222110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||+|++ +..+++++++.|++|+||||+.+|+.+|+++|+.+++
T Consensus 126 --------------------~~~p~p~~--------------~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 126 --------------------YQLRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp --------------------EECCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred --------------------eecCCCch--------------HHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence 01488888 9999999999999999999999999999999998664
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-20 Score=168.70 Aligned_cols=72 Identities=11% Similarity=0.117 Sum_probs=57.6
Q ss_pred cCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCcccccccccchhHH
Q 018946 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADML 340 (348)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~l 340 (348)
+||+|.+ |+.+++++|++|++|++|||+ .+|+.+|+.+|+.+++|.++....+++......+|++
T Consensus 175 ~kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v 240 (250)
T 2c4n_A 175 GKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI 240 (250)
T ss_dssp STTSTHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEE
T ss_pred CCCCHHH--------------HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEE
Confidence 4999999 999999999999999999999 6999999999999999998876655553222235555
Q ss_pred HHhhccc
Q 018946 341 CRILKSI 347 (348)
Q Consensus 341 ~~~l~~i 347 (348)
++.+.++
T Consensus 241 ~~~~~el 247 (250)
T 2c4n_A 241 YPSVAEI 247 (250)
T ss_dssp ESSGGGC
T ss_pred ECCHHHh
Confidence 5555543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-18 Score=156.75 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=90.3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCC---------------chHHHHHHHHcCCcccchheeecchhhhhhhccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~---------------~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~ 224 (348)
.+++||+.++|+.|+++|++++|+||. . ...++.+++.+|+. |+.++.+.+.. +.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~-----~~ 118 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQ---SGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHP-----QG 118 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEC---THHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBT-----TC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECc---CCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCC-----CC
Confidence 578999999999999999999999995 3 36778889999987 55444332110 00
Q ss_pred cc--ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEec
Q 018946 225 FV--LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (348)
Q Consensus 225 ~v--~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGD 302 (348)
.+ .++.+. .+||+|++ |+.+++++|++|++|+||||
T Consensus 119 ~~~~~~~~~~----------------------------~~KP~p~~--------------~~~~~~~lgi~~~~~~~VGD 156 (211)
T 2gmw_A 119 SVEEFRQVCD----------------------------CRKPHPGM--------------LLSARDYLHIDMAASYMVGD 156 (211)
T ss_dssp SSGGGBSCCS----------------------------SSTTSCHH--------------HHHHHHHHTBCGGGCEEEES
T ss_pred cccccCccCc----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEcC
Confidence 00 011111 24999999 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcE-EEECCCCCC
Q 018946 303 SQSGVAGAQRIGMPC-VVMRSRCIT 326 (348)
Q Consensus 303 s~~Di~aA~~aG~~~-i~v~~~~~~ 326 (348)
+.+|+.+|+++||.+ |+|.++...
T Consensus 157 ~~~Di~~a~~aG~~~~i~v~~g~~~ 181 (211)
T 2gmw_A 157 KLEDMQAAVAANVGTKVLVRTGKPI 181 (211)
T ss_dssp SHHHHHHHHHTTCSEEEEESSSSCC
T ss_pred CHHHHHHHHHCCCceEEEEecCCCc
Confidence 999999999999999 999987654
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.7e-19 Score=146.53 Aligned_cols=102 Identities=18% Similarity=0.299 Sum_probs=87.1
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
.||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+.++.+. +.
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~i~~~~-~~------------------------- 70 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSND---PGGLGAAPIRELETNGVVDKVLLSG-EL------------------------- 70 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS---CCGGGGHHHHHHHHTTSSSEEEEHH-HH-------------------------
T ss_pred CccHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHCChHhhccEEEEec-cC-------------------------
Confidence 467889999999999999999996 4566788899999999888765332 21
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
...||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||.+|++.+
T Consensus 71 -----------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 71 -----------------GVEKPEEAA--------------FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp -----------------SCCTTSHHH--------------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred -----------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence 123999999 9999999999999999999999999999999999999986
Q ss_pred CC
Q 018946 323 RC 324 (348)
Q Consensus 323 ~~ 324 (348)
+.
T Consensus 120 ~~ 121 (137)
T 2pr7_A 120 FD 121 (137)
T ss_dssp HH
T ss_pred hH
Confidence 43
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=155.78 Aligned_cols=104 Identities=17% Similarity=0.124 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++|+||+ ....++.+++ |+..+ +.+ ++++.+.. ++... +
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~---~~~~~~~~l~--~l~~~-~~v-~~~~~~~~--------~~~~~-~----- 134 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGG---MDFFVYPLLE--GIVEK-DRI-YCNHASFD--------NDYIH-I----- 134 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEE---EHHHHHHHHT--TTSCG-GGE-EEEEEECS--------SSBCE-E-----
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHh--cCCCC-CeE-EeeeeEEc--------CCceE-E-----
Confidence 678999999999999999999999995 5677777777 77665 443 44332211 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCc-cCCCCCchhhHHHHHHH-------HHHHHcCCCCCcEEEEecCHhhHHHHH
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALR-------AGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~-i~~~~~~~~~~~~~~~~-------~a~~~lgv~p~~~i~VGDs~~Di~aA~ 311 (348)
...||+|. + ++ .++++++++|++|+||||+.+|+.+|+
T Consensus 135 --------------------~~~kp~p~~~--------------~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~ 180 (236)
T 2fea_A 135 --------------------DWPHSCKGTC--------------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK 180 (236)
T ss_dssp --------------------ECTTCCCTTC--------------CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHH
T ss_pred --------------------ecCCCCcccc--------------ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHH
Confidence 01299999 5 44 778899999999999999999999999
Q ss_pred HcCCcEE
Q 018946 312 RIGMPCV 318 (348)
Q Consensus 312 ~aG~~~i 318 (348)
++|+.++
T Consensus 181 ~aG~~~~ 187 (236)
T 2fea_A 181 LSDLCFA 187 (236)
T ss_dssp TCSEEEE
T ss_pred hCCeeee
Confidence 9999886
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=151.69 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=82.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--ccchheeecchhhhhhhcccccccccccCCchh
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..++||+.++|+.|+++|++++|+||+ ....++..++.+|+. .+|...++...+.. +. + +.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~--~~----- 143 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGG---LSESIQPFADYLNIPRENIFAVETIWNSDGS---FK----E--LD----- 143 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHHTCCGGGEEEEEEEECTTSB---EE----E--EE-----
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCC---cHHHHHHHHHHcCCCcccEEEeeeeecCCCc---ee----c--cC-----
Confidence 458899999999999999999999995 678899999999994 45543222111100 00 0 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
..||+++.+ ++.+++.+|++|++|++|||+.+|+.++ ++|+.+
T Consensus 144 -----------------------~~~~~~~~~-------------~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~ 186 (219)
T 3kd3_A 144 -----------------------NSNGACDSK-------------LSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYAT 186 (219)
T ss_dssp -----------------------CTTSTTTCH-------------HHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCS
T ss_pred -----------------------CCCCCcccH-------------HHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCc
Confidence 127777761 4555667799999999999999999998 689998
Q ss_pred EEECCCCC
Q 018946 318 VVMRSRCI 325 (348)
Q Consensus 318 i~v~~~~~ 325 (348)
+++..+..
T Consensus 187 ~~v~~~~~ 194 (219)
T 3kd3_A 187 KFIAYMEH 194 (219)
T ss_dssp EEEEECSS
T ss_pred EEEeccCc
Confidence 88765543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-18 Score=170.12 Aligned_cols=178 Identities=17% Similarity=0.130 Sum_probs=117.6
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-----HHHHHHHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 155 (348)
..++++|+|||||||++.+.. ..+.+..|+.. ............. ..........+.. ...+.++.
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~------~~la~~~g~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI------EMLAAKAGAEG--QVAAITDAAMRGE-LDFAQSLQQRVATLAGLPATVIDEVA 252 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH------HHHHHHTTCHH--HHHHHHHHHHTTC-SCHHHHHHHHHHTTTTCBTHHHHHHH
T ss_pred ccCCcEEEEcCcccCcCCchH------HHHHHHcCCcH--HHHHHHHHHhcCC-cCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 445789999999999998753 44555556531 1111222221111 1111111111100 12233333
Q ss_pred hcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 156 ~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
. .++++||+.++|+.|+++|++++|+||+ +...++.+++.+|++.+|...+... .+.+++.+.|.. ..
T Consensus 253 ~--~~~~~pg~~e~l~~Lk~~G~~~~ivS~~---~~~~~~~~~~~lgl~~~~~~~l~~~----dg~~tg~~~~~v-~~-- 320 (415)
T 3p96_A 253 G--QLELMPGARTTLRTLRRLGYACGVVSGG---FRRIIEPLAEELMLDYVAANELEIV----DGTLTGRVVGPI-ID-- 320 (415)
T ss_dssp H--HCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCSEEEEECEEEE----TTEEEEEECSSC-CC--
T ss_pred H--hCccCccHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHcCccceeeeeEEEe----CCEEEeeEccCC-CC--
Confidence 2 2589999999999999999999999995 6789999999999998887543211 111112222211 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
+||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+
T Consensus 321 --------------------------~kpk~~~--------------~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~ 360 (415)
T 3p96_A 321 --------------------------RAGKATA--------------LREFAQRAGVPMAQTVAVGDGANDIDMLAAAGL 360 (415)
T ss_dssp --------------------------HHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred --------------------------CcchHHH--------------HHHHHHHcCcChhhEEEEECCHHHHHHHHHCCC
Confidence 2777777 999999999999999999999999999999999
Q ss_pred cEEE
Q 018946 316 PCVV 319 (348)
Q Consensus 316 ~~i~ 319 (348)
.+++
T Consensus 361 ~va~ 364 (415)
T 3p96_A 361 GIAF 364 (415)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8876
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-20 Score=166.12 Aligned_cols=159 Identities=16% Similarity=0.105 Sum_probs=109.7
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhc----CC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLAS----KD 159 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 159 (348)
.++|+||+||||+|+... +..+|++++. |++. .+.+.+.... ....+..........+.+++.. ..
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH--VPLEQRRGFL-----AREQYRALRPDLADKVASVYEAPGFFLD 71 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC--CCGGGCCSSC-----HHHHHHHHCTTHHHHHHHHHTSTTTTTT
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC--CCHHHHHHhh-----HHHHHHHHhHHHHHHHHHHHHhcCcccc
Confidence 479999999999999887 8888988886 6641 2222111110 0000000000001222232222 24
Q ss_pred CCCCCcHHHHHHHHHHC-CCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~-Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
.+++||+.++|+.|+++ |++++|+||+ ....++.+++++|+ |+.++ +
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~---~~~~~~~~l~~~gl---f~~i~-~------------------------- 119 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSP---LLKYHHCVGEKYRW---VEQHL-G------------------------- 119 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECC---CSSCTTTHHHHHHH---HHHHH-C-------------------------
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCC---ChhhHHHHHHHhCc---hhhhc-C-------------------------
Confidence 67899999999999999 9999999996 45667778888877 54321 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-Hc
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG----VAGAQ-RI 313 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~D----i~aA~-~a 313 (348)
..+++++|++|++|+||||+..| +.+|+ ++
T Consensus 120 ---------------------------------------------~~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~a 154 (193)
T 2i7d_A 120 ---------------------------------------------PQFVERIILTRDKTVVLGDLLIDDKDTVRGQEETP 154 (193)
T ss_dssp ---------------------------------------------HHHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSC
T ss_pred ---------------------------------------------HHHHHHcCCCcccEEEECCchhhCcHHHhhccccc
Confidence 12458899999999999999999 99999 99
Q ss_pred CCcEEEECCCCCCccc
Q 018946 314 GMPCVVMRSRCITTLP 329 (348)
Q Consensus 314 G~~~i~v~~~~~~~~~ 329 (348)
||.+|++.++.+....
T Consensus 155 G~~~i~~~~~~~~~~~ 170 (193)
T 2i7d_A 155 SWEHILFTCCHNRHLV 170 (193)
T ss_dssp SSEEEEECCGGGTTCC
T ss_pred ccceEEEEeccCcccc
Confidence 9999999887665544
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-19 Score=162.31 Aligned_cols=128 Identities=9% Similarity=0.007 Sum_probs=86.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHH-HHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS-VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~-il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++||+.++++.|+ +|+++ |+||...... .... +.+..++..+|+.+ +.++.+.
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~-~~~~~~~~~~~l~~~f~~~---------------~~~~~~~------ 180 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIP-TERGLLPGAGSVVTFVETA---------------TQTKPVY------ 180 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEE-ETTEEEECHHHHHHHHHHH---------------HTCCCEE------
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCccc-CCCCcccCCcHHHHHHHHH---------------hCCCccc------
Confidence 457899999999997 89997 9999632100 0011 11222233344332 2222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~ 317 (348)
.+||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||.+
T Consensus 181 ----------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~ 224 (264)
T 1yv9_A 181 ----------------------IGKPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS 224 (264)
T ss_dssp ----------------------CSTTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEE
T ss_pred ----------------------cCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcE
Confidence 23999999 999999999999999999999 59999999999999
Q ss_pred EEECCCCCCcccccccccchhHHHHhhccc
Q 018946 318 VVMRSRCITTLPVSKTQRLADMLCRILKSI 347 (348)
Q Consensus 318 i~v~~~~~~~~~l~~~~~~~d~l~~~l~~i 347 (348)
|+|.++....+++......+|.+++.+.++
T Consensus 225 i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 225 LLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp EEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred EEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 999998776555543222345555555443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.3e-18 Score=148.64 Aligned_cols=103 Identities=12% Similarity=0.171 Sum_probs=88.3
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCC-chHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchh
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~-~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..++.||+.++|+.|+++|++++|+||. . ...++.+++.+|+..+|+.+++..
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~---~~~~~~~~~l~~~gl~~~f~~~~~~~----------------------- 119 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRT---SEIEGANQLLELFDLFRYFVHREIYP----------------------- 119 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECC---SCHHHHHHHHHHTTCTTTEEEEEESS-----------------------
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCC---CChHHHHHHHHHcCcHhhcceeEEEe-----------------------
Confidence 3578999999999999999999999995 4 478899999999999888653211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
+|+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+
T Consensus 120 -------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 120 -------------------------GSKITH--------------FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp -------------------------SCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -------------------------CchHHH--------------HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 344445 89999999999999999999999999999999999
Q ss_pred EEECCCCCC
Q 018946 318 VVMRSRCIT 326 (348)
Q Consensus 318 i~v~~~~~~ 326 (348)
|++.++...
T Consensus 161 i~v~~g~~~ 169 (187)
T 2wm8_A 161 IHIQNGMNL 169 (187)
T ss_dssp EECSSSCCH
T ss_pred EEECCCCCh
Confidence 999987643
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-20 Score=164.56 Aligned_cols=160 Identities=15% Similarity=0.009 Sum_probs=110.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH----HHHHHHHHhcC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----KNALDEFLASK 158 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 158 (348)
++++||||+||||+|+... +..+|++++.+++. .+.+.+ .+. ...+.+....... ...|.+.....
T Consensus 3 ~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~~----~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGG-FLRKFRARFPDQPF----IALEDR---RGF--WVSEQYGRLRPGLSEKAISIWESKNFFF 72 (197)
T ss_dssp CCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSCC----CCGGGC---CSS--CHHHHHHHHSTTHHHHHHHHHTSTTTTT
T ss_pred CceEEEEeCCCCCccCcHH-HHHHHHHHHhcCCC----CCHHHh---cCC--cHHHHHHhcCHHHHHHHHHHHHhhhhhh
Confidence 5679999999999999987 88999999887621 221111 010 0000000000000 11221111112
Q ss_pred CCCCCCcHHHHHHHHHHC-CCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeecchhhhhhhcccccccccccCCch
Q 018946 159 DAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~-Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~ 236 (348)
..+++||+.++|+.|+++ |++++|+||+. ...++..++++|+.+ +|+
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~---~~~~~~~l~~~~l~~~~f~---------------------------- 121 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPI---KMFKYCPYEKYAWVEKYFG---------------------------- 121 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCC---SCCSSHHHHHHHHHHHHHC----------------------------
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCc---cchHHHHHHHhchHHHhch----------------------------
Confidence 467899999999999999 99999999963 456677888888776 664
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-
Q 018946 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG----VAGAQ- 311 (348)
Q Consensus 237 ~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~D----i~aA~- 311 (348)
..+++++|++|++|++|||+..| +.+|+
T Consensus 122 -----------------------------------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~ 154 (197)
T 1q92_A 122 -----------------------------------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEP 154 (197)
T ss_dssp -----------------------------------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCS
T ss_pred -----------------------------------------------HHHHHHhccCCccEEEECcccccCCchhhhccc
Confidence 12347899999999999999999 99999
Q ss_pred HcCCcEEEECCCCCCcccc
Q 018946 312 RIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 312 ~aG~~~i~v~~~~~~~~~l 330 (348)
++||.+|++.++++....+
T Consensus 155 ~aG~~~i~~~~~~~~~~~~ 173 (197)
T 1q92_A 155 TPSWEHVLFTACHNQHLQL 173 (197)
T ss_dssp SCSSEEEEECCTTTTTCCC
T ss_pred CCCceEEEecCcccccccc
Confidence 9999999999877765443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=144.32 Aligned_cols=175 Identities=13% Similarity=0.168 Sum_probs=105.8
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH---hh--HHHHHHHHHhc
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---FN--RKNALDEFLAS 157 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~ 157 (348)
.+|+|+||+||||+|+.. ++.+++.+|... ............. .......... .+ ....+.+.+..
T Consensus 4 ~~k~i~fDlDGTL~d~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET------IDEIAREAGVEE--EVKKITKEAMEGK-LNFEQSLRKRVSLLKDLPIEKVEKAIKR 74 (211)
T ss_dssp CCEEEEEECCCCCBSSCH------HHHHHHHTTCHH--HHHHHHHHHHTTS-SCHHHHHHHHHHTTTTCBHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCCCccH------HHHHHHHhCcHH--HHHHHHHHHHcCC-CCHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 468999999999999863 245555566531 0011111111110 1111111100 00 01223344432
Q ss_pred CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchh
Q 018946 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
.++.||+.++|+.|+++|++++++|+. ....++..++.+|+..+|...+...+.. +...+.++.. .+
T Consensus 75 --~~l~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~--- 141 (211)
T 1l7m_A 75 --ITPTEGAEETIKELKNRGYVVAVVSGG---FDIAVNKIKEKLGLDYAFANRLIVKDGK----LTGDVEGEVL-KE--- 141 (211)
T ss_dssp --CCBCTTHHHHHHHHHHTTEEEEEEEEE---EHHHHHHHHHHHTCSEEEEEEEEEETTE----EEEEEECSSC-ST---
T ss_pred --CCCCccHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHcCCCeEEEeeeEEECCE----EcCCcccCcc-CC---
Confidence 467899999999999999999999984 4566778889999987765443222100 0000000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
++.|+. +..+++++|++|++|++|||+.+|+.+|+.+|+.+
T Consensus 142 -------------------------~~K~~~--------------l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 142 -------------------------NAKGEI--------------LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp -------------------------THHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred -------------------------ccHHHH--------------HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence 111222 88999999999999999999999999999999975
Q ss_pred E
Q 018946 318 V 318 (348)
Q Consensus 318 i 318 (348)
+
T Consensus 183 ~ 183 (211)
T 1l7m_A 183 A 183 (211)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-19 Score=161.83 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=79.2
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHH
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~ 241 (348)
++||+.++++.|+ +|+++ ++||.. .......+..+|+..+|+... .++..+.+.
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~--------- 176 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKA---RYYKRKDGLALGPGPFVTALE------------YATDTKAMV--------- 176 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCC---SEEEETTEEEECSHHHHHHHH------------HHHTCCCEE---------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCC---CcCcccCCcccCCcHHHHHHH------------HHhCCCceE---------
Confidence 6789999999999 89999 999963 222233345566666665210 011111111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEE
Q 018946 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 320 (348)
Q Consensus 242 ~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v 320 (348)
.+||+|++ |+.+++++|++|++|++|||+. +|+.+|+++|+.+|+|
T Consensus 177 -------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 177 -------------------VGKPEKTF--------------FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV 223 (259)
T ss_dssp -------------------CSTTSHHH--------------HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred -------------------ecCCCHHH--------------HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 23999999 9999999999999999999998 9999999999999999
Q ss_pred CCCCC
Q 018946 321 RSRCI 325 (348)
Q Consensus 321 ~~~~~ 325 (348)
.++..
T Consensus 224 ~~g~~ 228 (259)
T 2ho4_A 224 KTGKY 228 (259)
T ss_dssp SSTTC
T ss_pred CCCCC
Confidence 98743
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-18 Score=155.07 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=77.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHH
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~ 241 (348)
+.||+.++|+.|+++|++++|+||+. ...++.+++. +.++|+.++.+.+.. .+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~---~~~~~~~l~~--l~~~f~~i~~~~~~~------------~~~--------- 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRS---PTKTETVSKT--LADNFHIPATNMNPV------------IFA--------- 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSC---CCSSCCHHHH--HHHHTTCCTTTBCCC------------EEC---------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHH--HHHhcCccccccchh------------hhc---------
Confidence 57899999999999999999999963 2333444444 445565432111100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 242 ~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
..||+|++ |+.+++++|+ |+||||+.+|+.+|+++||++|++.
T Consensus 143 -------------------~~KP~p~~--------------~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 143 -------------------GDKPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp -------------------CCCTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred -------------------CCCCCHHH--------------HHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 12999999 9999999998 9999999999999999999999999
Q ss_pred CCCCCc
Q 018946 322 SRCITT 327 (348)
Q Consensus 322 ~~~~~~ 327 (348)
++....
T Consensus 186 ~g~~~~ 191 (211)
T 2b82_A 186 RASNST 191 (211)
T ss_dssp CCTTCS
T ss_pred cCCCCc
Confidence 876544
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=144.59 Aligned_cols=181 Identities=11% Similarity=0.132 Sum_probs=111.7
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-----HHHHHHHHhcCCC
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFLASKDA 160 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 160 (348)
+++||+||||+++. .|..+++.+|+. .............. ............ ...+.++.. ..
T Consensus 11 ivifDlDGTL~d~~------~~~~~~~~~g~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 78 (201)
T 4ap9_A 11 VAVIDIEGTLTDFE------FWREMARITGKR---EIEELLEKGLSGEV-EWLDSLLKRVGLIRGIDEGTFLRTRE--KV 78 (201)
T ss_dssp EEEEECBTTTBCCC------HHHHHHHHHCCH---HHHHHHHHHHHTSS-CHHHHHHHHHHHTTTCBHHHHHHGGG--GC
T ss_pred eEEecccCCCcchH------HHHHHHHHhChH---HHHHHHHHHhcCCC-CHHHHHHHHHHHhcCCCHHHHHHHHH--hC
Confidence 44599999999877 456677776762 11222222222111 111111111100 223333332 35
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
.+.||+.++|+.|+++|++++|+||+ ....++.+ +.+|+..+++...... .. ..+
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~-~~~~~~~~~~~~~~~~-~~--------~~~------------ 133 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGS---FEEVLEPF-KELGDEFMANRAIFED-GK--------FQG------------ 133 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEE---ETTTSGGG-TTTSSEEEEEEEEEET-TE--------EEE------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHH-HHcCchhheeeEEeeC-Cc--------eEC------------
Confidence 78999999999999999999999995 45666777 8899887754432211 11 011
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
.+|.+.. ...+++++ +|++|++|||+.+|+.+|+.+|+. |++
T Consensus 134 ---------------------~~~~~~~--------------k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~~ 175 (201)
T 4ap9_A 134 ---------------------IRLRFRD--------------KGEFLKRF--RDGFILAMGDGYADAKMFERADMG-IAV 175 (201)
T ss_dssp ---------------------EECCSSC--------------HHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EEE
T ss_pred ---------------------CcCCccC--------------HHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EEE
Confidence 1566655 56667777 899999999999999999999998 455
Q ss_pred CCCCCCcccccccccc---hhHHHHhhccc
Q 018946 321 RSRCITTLPVSKTQRL---ADMLCRILKSI 347 (348)
Q Consensus 321 ~~~~~~~~~l~~~~~~---~d~l~~~l~~i 347 (348)
.+... .++.+ .+++.+.|..+
T Consensus 176 ~~~~~------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 176 GREIP------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp SSCCT------TCSEEESSHHHHHHHHHTC
T ss_pred CCCCc------cccEEEccHHHHHHHHHHh
Confidence 44332 22222 55566655543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-17 Score=158.91 Aligned_cols=178 Identities=14% Similarity=0.129 Sum_probs=116.4
Q ss_pred CCCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH-----HHHHHHHH
Q 018946 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 155 (348)
....++|+||+||||++.+ .+.++++..|+.. +............ ............. ...+..+.
T Consensus 104 i~~~~~viFD~DgTLi~~~------~~~~~~~~~g~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 174 (335)
T 3n28_A 104 LTKPGLIVLDMDSTAIQIE------CIDEIAKLAGVGE--EVAEVTERAMQGE-LDFEQSLRLRVSKLKDAPEQILSQVR 174 (335)
T ss_dssp TTSCCEEEECSSCHHHHHH------HHHHHHHHHTCHH--HHHHHHHHHHTTS-SCHHHHHHHHHHTTTTCBTTHHHHHH
T ss_pred ccCCCEEEEcCCCCCcChH------HHHHHHHHcCCch--HHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 3445799999999999944 3455565666531 1111121121111 1111111110000 11222222
Q ss_pred hcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 156 ~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
. ..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|...+...+ +.+.+.+.+.. ..
T Consensus 175 -~-~~~~~pg~~~~l~~L~~~g~~~~ivS~~---~~~~~~~~~~~lgl~~~~~~~l~~~d----~~~tg~~~~~~-~~-- 242 (335)
T 3n28_A 175 -E-TLPLMPELPELVATLHAFGWKVAIASGG---FTYFSDYLKEQLSLDYAQSNTLEIVS----GKLTGQVLGEV-VS-- 242 (335)
T ss_dssp -T-TCCCCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHHTCSEEEEEEEEEET----TEEEEEEESCC-CC--
T ss_pred -H-hCCcCcCHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHcCCCeEEeeeeEeeC----Ceeeeeecccc-cC--
Confidence 2 3679999999999999999999999995 67889999999999988876532111 11111122211 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+
T Consensus 243 --------------------------~kpk~~~--------------~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~ 282 (335)
T 3n28_A 243 --------------------------AQTKADI--------------LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGL 282 (335)
T ss_dssp --------------------------HHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred --------------------------hhhhHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCC
Confidence 2777777 999999999999999999999999999999999
Q ss_pred cEEE
Q 018946 316 PCVV 319 (348)
Q Consensus 316 ~~i~ 319 (348)
.+++
T Consensus 283 ~va~ 286 (335)
T 3n28_A 283 GVAY 286 (335)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8877
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-17 Score=162.83 Aligned_cols=119 Identities=15% Similarity=0.039 Sum_probs=95.5
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchh-eeecchhhhhhhcccccccccccCCchh
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~-~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..+++||+.++|+.|+++|++++|+||+ ....+..+++++|+.++|+. .+++++++... |+....
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~---~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------~~~~~~---- 278 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGR---PYTETVVPFENLGLLPYFEADFIATASDVLEA-------ENMYPQ---- 278 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------HHHSTT----
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCC---cHHHHHHHHHHcCChHhcCCCEEEeccccccc-------cccccc----
Confidence 3578999999999999999999999995 56889999999999999982 44555544310 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC--------------CCCCcEEEEecC
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--------------KPVRNCFLIAGS 303 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg--------------v~p~~~i~VGDs 303 (348)
+...+||+|++ |..+++++| ++|++|+||||+
T Consensus 279 --------------------~kp~~KP~P~~--------------~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs 324 (384)
T 1qyi_A 279 --------------------ARPLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDS 324 (384)
T ss_dssp --------------------SCCCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESS
T ss_pred --------------------ccCCCCCCHHH--------------HHHHHHHcCCccccccccccccCCCCcCeEEEcCC
Confidence 00013999999 999999999 999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCCC
Q 018946 304 QSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 304 ~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
.+|+.+|+++||.+|+|.++..
T Consensus 325 ~~Di~aAk~AG~~~I~V~~g~~ 346 (384)
T 1qyi_A 325 LADLLSAQKIGATFIGTLTGLK 346 (384)
T ss_dssp HHHHHHHHHHTCEEEEESCBTT
T ss_pred HHHHHHHHHcCCEEEEECCCcc
Confidence 9999999999999999998764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.67 E-value=8.5e-17 Score=151.08 Aligned_cols=90 Identities=10% Similarity=0.102 Sum_probs=75.8
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+.++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~i~---------------------------- 210 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGD---NWRSAEAISRELNLDLVIAEVL---------------------------- 210 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCSEEECSCC----------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhCCceeeeecC----------------------------
Confidence 478999999999999999999999995 5788899999999998886542
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
| .. ...+++++++. ++|+||||+.+|+.+|+++|+. |.
T Consensus 211 ------------------------~--~~--------------K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~ 248 (287)
T 3a1c_A 211 ------------------------P--HQ--------------KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IA 248 (287)
T ss_dssp ------------------------T--TC--------------HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EE
T ss_pred ------------------------h--HH--------------HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EE
Confidence 0 00 34667889998 9999999999999999999998 55
Q ss_pred ECC
Q 018946 320 MRS 322 (348)
Q Consensus 320 v~~ 322 (348)
+.+
T Consensus 249 ~~~ 251 (287)
T 3a1c_A 249 VGS 251 (287)
T ss_dssp ECC
T ss_pred eCC
Confidence 543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.4e-16 Score=144.45 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=61.5
Q ss_pred hhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCcccccccccchh
Q 018946 260 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLAD 338 (348)
Q Consensus 260 ~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d 338 (348)
..+||+|++ |+.+++++|++|++|++|||+ .+||.+|+++|+++|+|.++....+.+......+|
T Consensus 179 ~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd 244 (264)
T 3epr_A 179 FIGKPNAII--------------MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPS 244 (264)
T ss_dssp ECSTTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCS
T ss_pred cCCCCCHHH--------------HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCC
Confidence 468999999 999999999999999999999 69999999999999999998877766654322355
Q ss_pred HHHHhhccc
Q 018946 339 MLCRILKSI 347 (348)
Q Consensus 339 ~l~~~l~~i 347 (348)
++++.+.+|
T Consensus 245 ~~~~~l~~l 253 (264)
T 3epr_A 245 YVLASLDEW 253 (264)
T ss_dssp EEESCGGGC
T ss_pred EEECCHHHH
Confidence 555555554
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-16 Score=136.87 Aligned_cols=89 Identities=16% Similarity=0.081 Sum_probs=77.1
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHH
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~ 242 (348)
.|++.++|+.|+++|++++|+||. ....++.+++++|+..+|+.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~~~~--------------------------------- 81 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGR---DSAPLITRLKELGVEEIYTG--------------------------------- 81 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESC---CCHHHHHHHHHTTCCEEEEC---------------------------------
T ss_pred cccHHHHHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCHhhccC---------------------------------
Confidence 355589999999999999999995 57889999999999877642
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 243 ~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
.||+|++ |+.++++++++|++|+||||+.+|+.+|+.+|+.+++.
T Consensus 82 -------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 82 -------------------SYKKLEI--------------YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp -------------------C--CHHH--------------HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 1888888 99999999999999999999999999999999997754
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-16 Score=146.59 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=69.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+.++. .+.+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~f~~~~~-~~k~~---------------------- 197 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGD---NRFVAKWVAEELGLDDYFAEVLP-HEKAE---------------------- 197 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCSEEECSCCG-GGHHH----------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCChhHhHhcCH-HHHHH----------------------
Confidence 67899999999999999999999995 67889999999999998876532 22111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
..||.|+. + +|++|||+.+|+.+++.+|+.+++
T Consensus 198 --------------------~~k~~~~~--------------~------------~~~~vGD~~nDi~~~~~Ag~~va~ 230 (280)
T 3skx_A 198 --------------------KVKEVQQK--------------Y------------VTAMVGDGVNDAPALAQADVGIAI 230 (280)
T ss_dssp --------------------HHHHHHTT--------------S------------CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred --------------------HHHHHHhc--------------C------------CEEEEeCCchhHHHHHhCCceEEe
Confidence 12566665 3 799999999999999999974433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-17 Score=151.98 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=55.2
Q ss_pred CCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCccccc----ccccch
Q 018946 263 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS----KTQRLA 337 (348)
Q Consensus 263 KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~----~~~~~~ 337 (348)
||+|.+ |+.+++++|++|++|++|||+ .+|+.+|+.+|+.+|+|.++......+. .++.++
T Consensus 195 kpk~~~--------------~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i 260 (271)
T 1vjr_A 195 KPNPLV--------------VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF 260 (271)
T ss_dssp TTSTHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE
T ss_pred CCCHHH--------------HHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEE
Confidence 999999 999999999999999999999 5999999999999999998876544443 233344
Q ss_pred hHHHHhh
Q 018946 338 DMLCRIL 344 (348)
Q Consensus 338 d~l~~~l 344 (348)
+.+.+.+
T Consensus 261 ~~l~el~ 267 (271)
T 1vjr_A 261 KNLGELA 267 (271)
T ss_dssp SSHHHHH
T ss_pred CCHHHHH
Confidence 4444443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-17 Score=153.62 Aligned_cols=122 Identities=10% Similarity=0.137 Sum_probs=87.5
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCCCCchHH--H--HHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R--SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 165 Gv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~--~--~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
...++++.|+++|++ +|+||... ... . .+++.+++..+|+.++ .++.+.
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~---~~~~~~~~~~~~~~~l~~~f~~~~---------------~~~~~~-------- 201 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDN---TYPLTKTDVAIAIGGVATMIESIL---------------GRRFIR-------- 201 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCS---EEECSSSCEEECHHHHHHHHHHHH---------------CSCEEE--------
T ss_pred cHHHHHHHHhcCCCe-EEEECCCc---cccCcCCCccccCChHHHHHHHHh---------------CCceeE--------
Confidence 778888899999999 99999642 111 1 1123445555665432 122221
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc----CCCCCcEEEEecCH-hhHHHHHHcCC
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA----EKPVRNCFLIAGSQ-SGVAGAQRIGM 315 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l----gv~p~~~i~VGDs~-~Di~aA~~aG~ 315 (348)
.+||+|++ |+.+++++ |++|++|+||||+. +||.+|+++||
T Consensus 202 --------------------~~KP~p~~--------------~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~ 247 (284)
T 2hx1_A 202 --------------------FGKPDSQM--------------FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGL 247 (284)
T ss_dssp --------------------ESTTSSHH--------------HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred --------------------ecCCCHHH--------------HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCC
Confidence 23999999 99999999 99999999999995 99999999999
Q ss_pred cEEEECCCCCCccccc----ccccchhHHHHhhccc
Q 018946 316 PCVVMRSRCITTLPVS----KTQRLADMLCRILKSI 347 (348)
Q Consensus 316 ~~i~v~~~~~~~~~l~----~~~~~~d~l~~~l~~i 347 (348)
.+|+|.++.....++. .....+|++++.|.++
T Consensus 248 ~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 248 DTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999999877655544 2112356666666554
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=139.93 Aligned_cols=73 Identities=8% Similarity=0.101 Sum_probs=54.9
Q ss_pred hhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCcccccccccchh
Q 018946 260 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLAD 338 (348)
Q Consensus 260 ~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d 338 (348)
..+||+|.+ |+.+++++|+++++|++|||+ .+||.+|+.+|+.++++.++....+.+......+|
T Consensus 180 ~~~kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d 245 (266)
T 3pdw_A 180 FIGKPESII--------------MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPT 245 (266)
T ss_dssp ECSTTSSHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCS
T ss_pred ccCCCCHHH--------------HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCC
Confidence 468999999 999999999999999999999 79999999999999999998877766654222244
Q ss_pred HHHHhhcc
Q 018946 339 MLCRILKS 346 (348)
Q Consensus 339 ~l~~~l~~ 346 (348)
++++.+.+
T Consensus 246 ~v~~~~~e 253 (266)
T 3pdw_A 246 HAIDSLTE 253 (266)
T ss_dssp EEESSGGG
T ss_pred EEeCCHHH
Confidence 44444443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.1e-16 Score=132.15 Aligned_cols=84 Identities=19% Similarity=0.114 Sum_probs=75.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....++.+++++|+..+|...
T Consensus 39 ~l~~l~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~~~~~-------------------------------------- 77 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGE---KTEIVRRRAEKLKVDYLFQGV-------------------------------------- 77 (164)
T ss_dssp HHHHHHHTTCCEEEECSS---CCHHHHHHHHHTTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCC---ChHHHHHHHHHcCCCEeeccc--------------------------------------
Confidence 799999999999999995 568999999999999877642
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.+
T Consensus 78 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~ 122 (164)
T 3e8m_A 78 --------------VDKLSA--------------AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPAS 122 (164)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTT
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCC
Confidence 888888 999999999999999999999999999999999877643
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-15 Score=137.68 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=88.9
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCc---------------hHHHHHHHHcCCcccchheeecchhhhhhhccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~---------------~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~ 224 (348)
..+.||+.++|+.|+++|++++|+||. .. ..+...++.+|+. |+..+.+..... +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~----g~ 125 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQ---SGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA----GV 125 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEEC---HHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT----CC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCc---CCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC----Cc
Confidence 468999999999999999999999995 34 5778889999875 332221110000 00
Q ss_pred ccc-cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC
Q 018946 225 FVL-GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (348)
Q Consensus 225 ~v~-g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs 303 (348)
++. .+.+ ..+||+|++ |+.+++++|++|++|+||||+
T Consensus 126 ~~~~~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~i~~~~~~~VGD~ 163 (218)
T 2o2x_A 126 GPLAIPDH----------------------------PMRKPNPGM--------------LVEAGKRLALDLQRSLIVGDK 163 (218)
T ss_dssp STTCCSSC----------------------------TTSTTSCHH--------------HHHHHHHHTCCGGGCEEEESS
T ss_pred eeecccCC----------------------------ccCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCC
Confidence 000 0111 134999999 999999999999999999999
Q ss_pred HhhHHHHHHcCCcE-EEECCCCCCcc
Q 018946 304 QSGVAGAQRIGMPC-VVMRSRCITTL 328 (348)
Q Consensus 304 ~~Di~aA~~aG~~~-i~v~~~~~~~~ 328 (348)
.+||.+|+++||.+ |+|.++.....
T Consensus 164 ~~Di~~a~~aG~~~~i~v~~g~~~~~ 189 (218)
T 2o2x_A 164 LADMQAGKRAGLAQGWLVDGEAAVQP 189 (218)
T ss_dssp HHHHHHHHHTTCSEEEEETCCCEEET
T ss_pred HHHHHHHHHCCCCEeEEEecCCCCcc
Confidence 99999999999999 99998775543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=137.89 Aligned_cols=84 Identities=8% Similarity=0.044 Sum_probs=74.1
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....++.+++.+|+..+|...
T Consensus 84 ~L~~L~~~G~~l~I~T~~---~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 122 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGR---RAKLLEDRANTLGITHLYQGQ-------------------------------------- 122 (211)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCchhhccc--------------------------------------
Confidence 999999999999999994 678999999999999877642
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
||.|++ ++.+++++|++|++|++|||+.+|+.+++++|+.+++..
T Consensus 123 --------------k~K~~~--------------l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~ 167 (211)
T 3ij5_A 123 --------------SDKLVA--------------YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVAD 167 (211)
T ss_dssp --------------SSHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT
T ss_pred --------------CChHHH--------------HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCC
Confidence 555566 999999999999999999999999999999999866543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-15 Score=150.05 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=80.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCC------CC---chHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGK------SG---DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~------~~---~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
++||+.++|+.|+++|++++|+||... +. ...+..+++.+|+. |+.++.+. ++.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~-~~~-------------- 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATH-AGL-------------- 150 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECS-SST--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECC-CCC--------------
Confidence 789999999999999999999999410 01 12377888899984 66543322 221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC----CCCCcEEEEecCH----
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 304 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg----v~p~~~i~VGDs~---- 304 (348)
.+||+|++ |+.+++++| ++|++|+||||+.
T Consensus 151 ----------------------------~~KP~p~~--------------~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~ 188 (416)
T 3zvl_A 151 ----------------------------NRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 188 (416)
T ss_dssp ----------------------------TSTTSSHH--------------HHHHHHHSSTTCCCCGGGCEEECSCSCBCT
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHhCCCCCCCHHHeEEEECCCCCcc
Confidence 23999999 999999997 9999999999997
Q ss_pred -------------hhHHHHHHcCCcEEEEC
Q 018946 305 -------------SGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 305 -------------~Di~aA~~aG~~~i~v~ 321 (348)
.|+.+|+++|++++...
T Consensus 189 ~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 189 NWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp TSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred cccccccccCCChhhHHHHHHcCCcccCcH
Confidence 89999999999988544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-16 Score=140.06 Aligned_cols=82 Identities=11% Similarity=0.122 Sum_probs=71.6
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....++.+++.+|+. +|...
T Consensus 47 ~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~lgi~-~~~~~-------------------------------------- 84 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTE---QNPVVAARARKLKIP-VLHGI-------------------------------------- 84 (176)
T ss_dssp HHHHHHHTTCEEEEEESS---CCHHHHHHHHHHTCC-EEESC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEECc---ChHHHHHHHHHcCCe-eEeCC--------------------------------------
Confidence 899999999999999995 678999999999988 44321
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
||.|++ ++.+++++|+++++|++|||+.+|+.+++.+|+.+++.
T Consensus 85 --------------~~k~~~--------------l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~ 128 (176)
T 3mmz_A 85 --------------DRKDLA--------------LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA 128 (176)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC
Confidence 666677 99999999999999999999999999999999876543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.9e-16 Score=135.12 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=84.8
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC------------CchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~------------~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
.+++||+.++|+.|+++|++++|+||+..- ....+..+++.+|+. |+.++++....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~---------- 108 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP---------- 108 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG----------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCC----------
Confidence 568999999999999999999999995100 356788889999987 66654431000
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.+.+ ..+||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 109 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~~gi~~~~~l~VGD~~~Di 146 (176)
T 2fpr_A 109 ADEC----------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 146 (176)
T ss_dssp GGCC----------------------------SSSTTSCGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred cccc----------------------------cccCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 0000 123999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 018946 308 AGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~ 324 (348)
.+|+++||.+|++.++.
T Consensus 147 ~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 147 QLAENMGINGLRYDRET 163 (176)
T ss_dssp HHHHHHTSEEEECBTTT
T ss_pred HHHHHcCCeEEEEcCCc
Confidence 99999999999998753
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=5.7e-15 Score=135.79 Aligned_cols=58 Identities=17% Similarity=0.191 Sum_probs=52.2
Q ss_pred hhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCcEEEECCCCCCccccc
Q 018946 260 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS 331 (348)
Q Consensus 260 ~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~ 331 (348)
..+||+|.+ |+.+++++|++|++|++|||+ .+|+.+|+++|+.+|+|.++......+.
T Consensus 184 ~~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~ 242 (268)
T 3qgm_A 184 VVGKPSEVI--------------MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLD 242 (268)
T ss_dssp ECSTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHH
T ss_pred ecCCCCHHH--------------HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHH
Confidence 357888888 999999999999999999999 5999999999999999999887766555
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.2e-15 Score=132.29 Aligned_cols=82 Identities=11% Similarity=0.129 Sum_probs=71.5
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....++.+++.+|+.++|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~lgl~~~f~~~-------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGR---KTAIVERRAKSLGIEHLFQGR-------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHHTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEECc---ChHHHHHHHHHcCCHHHhcCc--------------------------------------
Confidence 899999999999999995 678999999999999887642
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.|++ ++.+++++|++|++|++|||+.+|+.+++.+|+.+++
T Consensus 93 --------------~~K~~~--------------~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~ 135 (189)
T 3mn1_A 93 --------------EDKLVV--------------LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV 135 (189)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence 122244 8999999999999999999999999999999998654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.4e-16 Score=141.40 Aligned_cols=51 Identities=22% Similarity=0.305 Sum_probs=47.5
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCC
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 325 (348)
.+||+|.+ |+.+++++|++|++|++|||+. +|+.+|+.+|+.+++|.++..
T Consensus 188 ~~kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~ 239 (271)
T 2x4d_A 188 VGKPSPEF--------------FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKF 239 (271)
T ss_dssp ESTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTC
T ss_pred ccCCCHHH--------------HHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCC
Confidence 35999999 9999999999999999999998 999999999999999998743
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.57 E-value=7e-15 Score=127.95 Aligned_cols=114 Identities=11% Similarity=0.010 Sum_probs=62.3
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHH-HHHhcCCCC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALD-EFLASKDAP 161 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 161 (348)
..++||||+||||+|+... +..+|++ .+|.+ ++.+.+ .+.... .............+. +.+. ...+
T Consensus 3 m~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~---~~~~~~---~g~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~ 69 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGA-VVKAVNE---RADLN---IKMESL---NGKKLK--HMIPEHEGLVMDILKEPGFF-RNLD 69 (180)
T ss_dssp CCCEEEEETBTTTBCHHHH-HHHHHHH---HSCCC---CCGGGC---TTCCC----------CHHHHHHHSTTGG-GSCC
T ss_pred cccEEEEeCCCcccccHHH-HHHHHHH---HhCCC---CCHHHH---cCccHH--HHCCchHHHHHHHHhCcchh-ccCC
Confidence 4589999999999999986 6677776 56765 222211 111100 000000000011111 1111 2467
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCc--hHHHHHHHH-cCCcccchhe
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD--RIARSVVEK-LGSERISKIK 210 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~--~~~~~il~~-lgl~~~f~~~ 210 (348)
++||+.++|+.|++. ++++|+||..+... ......+.. ++...+|+.+
T Consensus 70 ~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i 120 (180)
T 3bwv_A 70 VMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFV 120 (180)
T ss_dssp BCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEE
T ss_pred CCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEE
Confidence 899999999999985 99999999521011 222334444 5555555443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.9e-16 Score=137.39 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=73.5
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
.|+.|+++|++++|+||. ....++.+++.+|+..+|...
T Consensus 60 ~l~~L~~~G~~~~ivT~~---~~~~~~~~l~~lgi~~~~~~~-------------------------------------- 98 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGR---RSQIVENRMKALGISLIYQGQ-------------------------------------- 98 (195)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHTTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEECc---CHHHHHHHHHHcCCcEEeeCC--------------------------------------
Confidence 589999999999999994 678999999999998876532
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
||.|++ ++.+++++|++|++|++|||+.+|+.+++.+|+.+++.
T Consensus 99 --------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~ 142 (195)
T 3n07_A 99 --------------DDKVQA--------------YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA 142 (195)
T ss_dssp --------------SSHHHH--------------HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred --------------CCcHHH--------------HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC
Confidence 677777 99999999999999999999999999999999986643
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.7e-16 Score=146.28 Aligned_cols=112 Identities=11% Similarity=-0.029 Sum_probs=79.1
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcC-CcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lg-l~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.++|++.++++.|++.|+ ++++||............+..+| +..+|+. ++..+.+..
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~---------------~~~~~~~~~------ 213 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVET---------------ASGRQALVV------ 213 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHH---------------HHTCCCEEC------
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHH---------------HhCCCceee------
Confidence 457899999999999999 99999964211100001111122 2222322 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i 318 (348)
+||+|++ |+.+++++|++|++|++|||+. +||.+|+++|+.+|
T Consensus 214 ----------------------~KP~~~~--------------~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i 257 (306)
T 2oyc_A 214 ----------------------GKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 257 (306)
T ss_dssp ----------------------STTSTHH--------------HHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEE
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEE
Confidence 3999999 9999999999999999999996 99999999999999
Q ss_pred EECCCCCCcccc
Q 018946 319 VMRSRCITTLPV 330 (348)
Q Consensus 319 ~v~~~~~~~~~l 330 (348)
+|.++......+
T Consensus 258 ~v~~g~~~~~~~ 269 (306)
T 2oyc_A 258 LTLTGVSRLEEA 269 (306)
T ss_dssp EESSSSCCHHHH
T ss_pred EECCCCCCHHHH
Confidence 999987664443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-15 Score=140.96 Aligned_cols=110 Identities=10% Similarity=0.008 Sum_probs=76.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-cCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++|++.++++.|+ +|+++ |+||....... ...++.. .++..+|+. ++..+.+..
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~-~~~~l~~~~~l~~~~~~---------------~~~~~~~~~----- 185 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPG-EEGIYPGAGSIIAALKV---------------ATNVEPIII----- 185 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEE-TTEEEECHHHHHHHHHH---------------HHCCCCEEC-----
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccC-CCCCcCCcHHHHHHHHH---------------HhCCCccEe-----
Confidence 356889999999999 89998 99996321100 0011111 223333332 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
+||+|++ |+.++++ ++|++|+||||+. +||.+|+++||.+
T Consensus 186 -----------------------~KP~~~~--------------~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~ 226 (263)
T 1zjj_A 186 -----------------------GKPNEPM--------------YEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKA 226 (263)
T ss_dssp -----------------------STTSHHH--------------HHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEE
T ss_pred -----------------------cCCCHHH--------------HHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeE
Confidence 3999999 9999999 9999999999995 9999999999999
Q ss_pred EEECCCCCCccccc
Q 018946 318 VVMRSRCITTLPVS 331 (348)
Q Consensus 318 i~v~~~~~~~~~l~ 331 (348)
|+|.++......+.
T Consensus 227 i~v~~g~~~~~~~~ 240 (263)
T 1zjj_A 227 IMVLTGVSSLEDIK 240 (263)
T ss_dssp EEESSSSCCHHHHT
T ss_pred EEECCCCCChHHHH
Confidence 99998876544443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-15 Score=132.92 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=74.0
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
.|+.|+++|++++|+||. ....++.+++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~---~~~~~~~~l~~lgl~~~~~~~-------------------------------------- 92 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTA---QNAVVDHRMEQLGITHYYKGQ-------------------------------------- 92 (191)
T ss_dssp HHHHHHHTTCEEEEECSC---CSHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCc---ChHHHHHHHHHcCCccceeCC--------------------------------------
Confidence 488999999999999995 678899999999999877643
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
||+|++ ++.+++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus 93 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 135 (191)
T 3n1u_A 93 --------------VDKRSA--------------YQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV 135 (191)
T ss_dssp --------------SSCHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe
Confidence 888888 9999999999999999999999999999999998753
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.9e-15 Score=128.06 Aligned_cols=86 Identities=14% Similarity=0.017 Sum_probs=75.5
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHH
Q 018946 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 245 (348)
Q Consensus 166 v~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k 245 (348)
..++|+.|+++|++++++||. ....++.+++.+|+..+|+..
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~---~~~~~~~~~~~lgl~~~~~~~----------------------------------- 81 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGK----------------------------------- 81 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESC-----------------------------------
T ss_pred hHHHHHHHHHCCCeEEEEeCC---CcHHHHHHHHHcCCceeecCC-----------------------------------
Confidence 347999999999999999995 568899999999998876421
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 246 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 246 ~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
||.+++ ++.+++++|++|++|++|||+.+|+.+++.+|+.+++.
T Consensus 82 -----------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 82 -----------------LEKETA--------------CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp -----------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -----------------CCcHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 677777 99999999999999999999999999999999997764
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.4e-14 Score=126.27 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=74.4
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
+|+.|+++|++++|+||. ....++.+++.+|+..+|..
T Consensus 61 ~l~~L~~~g~~v~ivT~~---~~~~~~~~l~~lgl~~~~~~--------------------------------------- 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGR---KAKLVEDRCATLGITHLYQG--------------------------------------- 98 (188)
T ss_dssp HHHHHHTTTCEEEEECSS---CCHHHHHHHHHHTCCEEECS---------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCC---ChHHHHHHHHHcCCceeecC---------------------------------------
Confidence 899999999999999995 56889999999999877642
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+.+|+.+++.
T Consensus 99 -------------~kpk~~~--------------~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 99 -------------QSNKLIA--------------FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp -------------CSCSHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred -------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 1888888 99999999999999999999999999999999988654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-15 Score=137.37 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=76.2
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
.+++||+.++|+.|+++|++++++||. ....++.+++.+|+.++|+.++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~f~~~~---------------------------- 183 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGD---KEDKVKELSKELNIQEYYSNLS---------------------------- 183 (263)
Confidence 468999999999999999999999995 5788999999999998876542
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
|+. +..++++++.++++|+||||+.+|+.+++++|+.+.+
T Consensus 184 --------------------------p~~--------------k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~ 223 (263)
T 2yj3_A 184 --------------------------PED--------------KVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAM 223 (263)
Confidence 111 5567789999999999999999999999999986544
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-13 Score=129.39 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=61.4
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCCC
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (348)
..+++||||+||||+++..+ +...+.. +.. + . ..+.+++.....+
T Consensus 57 ~~~kavifDlDGTLld~~~~-~~~~~~~-----~~~---~-~-------------------------~~~~~~~~~~~~~ 101 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPH-QAMSVKT-----GKG---Y-P-------------------------YKWDDWINKAEAE 101 (258)
T ss_dssp SSEEEEEECSBTTTEECHHH-HHHHHHH-----SCC---T-T-------------------------TTHHHHHHHCCCE
T ss_pred CCCCEEEEeCcccCcCCHHH-HHHHHhc-----ccc---h-H-------------------------HHHHHHHHcCCCC
Confidence 35789999999999998754 2222211 111 1 0 0111112223467
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc--ccchhe
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIK 210 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~--~~f~~~ 210 (348)
+.||+.++|+.|+++|++++|+||........+...++.+|+. .+|+.+
T Consensus 102 ~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi 152 (258)
T 2i33_A 102 ALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHIL 152 (258)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEE
Confidence 8999999999999999999999995311134566777888998 555543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-13 Score=126.80 Aligned_cols=112 Identities=18% Similarity=0.049 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHHC-CCcEEEEeCCCCC------------------CchHHHHHHHHcCCcccchheeecchhhhhhh
Q 018946 161 PLRPGVEDFVDDAYNE-GIPLIVLTAYGKS------------------GDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~-Gi~vaIvTn~~~~------------------~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~ 221 (348)
...+++.++++.++++ |+++++.|+.... ....+..+++.+|+..++... .. . ...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~-~-~~~ 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRC---NP-L-AGD 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEEC---CG-G-GTC
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEc---cc-c-ccC
Confidence 5678999999999998 9999999973000 234556666777776555321 00 0 000
Q ss_pred cccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEe
Q 018946 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 301 (348)
Q Consensus 222 ~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VG 301 (348)
.......+.+..+ ||.++. ++.+++++|++|++|++||
T Consensus 197 ~~~~~~~~~~~~~----------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~~G 234 (289)
T 3gyg_A 197 PEDSYDVDFIPIG----------------------------TGKNEI--------------VTFMLEKYNLNTERAIAFG 234 (289)
T ss_dssp CTTEEEEEEEESC----------------------------CSHHHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred CCCceEEEEEeCC----------------------------CCHHHH--------------HHHHHHHcCCChhhEEEEc
Confidence 0000001111111 444444 8999999999999999999
Q ss_pred cCHhhHHHHHHcCCcEEE
Q 018946 302 GSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 302 Ds~~Di~aA~~aG~~~i~ 319 (348)
|+.+|+.+++.+|+.+++
T Consensus 235 Ds~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 235 DSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp CSGGGHHHHTTSSEEEEC
T ss_pred CCHHHHHHHHhCCcEEEE
Confidence 999999999999976443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=123.29 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=81.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH--------cCCcccchheeecchhhhhhhccccccccccc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK--------LGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~--------lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
+++||+.++|+.|+++|++++|+||........+...++. +|+ +|+.++.+.+ ..
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~-~~-------------- 250 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQ-GD-------------- 250 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCT-TC--------------
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccC-CC--------------
Confidence 3589999999999999999999999643222334666777 888 3665433221 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCc-EEEEecCHhhHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGAQ 311 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~-~i~VGDs~~Di~aA~ 311 (348)
.||+|++ +..++++++.++.+ |+||||+..|+.+|+
T Consensus 251 -----------------------------~kp~p~~--------------~~~~~~~~~~~~~~~~~~vgD~~~di~~a~ 287 (301)
T 1ltq_A 251 -----------------------------TRKDDVV--------------KEEIFWKHIAPHFDVKLAIDDRTQVVEMWR 287 (301)
T ss_dssp -----------------------------CSCHHHH--------------HHHHHHHHTTTTCEEEEEEECCHHHHHHHH
T ss_pred -----------------------------CcHHHHH--------------HHHHHHHHhccccceEEEeCCcHHHHHHHH
Confidence 1899999 99999999887755 799999999999999
Q ss_pred HcCCcEEEECCC
Q 018946 312 RIGMPCVVMRSR 323 (348)
Q Consensus 312 ~aG~~~i~v~~~ 323 (348)
++||++|+|.++
T Consensus 288 ~aG~~~~~v~~G 299 (301)
T 1ltq_A 288 RIGVECWQVASG 299 (301)
T ss_dssp HTTCCEEECSCC
T ss_pred HcCCeEEEecCC
Confidence 999999999876
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.2e-13 Score=115.92 Aligned_cols=81 Identities=10% Similarity=0.083 Sum_probs=64.2
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHH--HcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVE--KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKA 246 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~--~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~ 246 (348)
.|+.|+++|++++|+||. ..++.+++ .+|+. +|. +.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~-----~~~~~~l~~l~lgi~-~~~----g~-------------------------------- 81 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER-----ACSKQTLSALKLDCK-TEV----SV-------------------------------- 81 (168)
T ss_dssp HHHHHHHTTCEEEEECSS-----CCCHHHHHTTCCCCC-EEC----SC--------------------------------
T ss_pred HHHHHHHCCCEEEEEeCc-----HHHHHHHHHhCCCcE-EEE----CC--------------------------------
Confidence 689999999999999993 56677788 56664 321 10
Q ss_pred HHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 247 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 247 ~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
|+.+++ ++.+++++|++|++|++|||+.+|+.+++.+|+.++ +.+
T Consensus 82 ----------------~~K~~~--------------l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~n 126 (168)
T 3ewi_A 82 ----------------SDKLAT--------------VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PAD 126 (168)
T ss_dssp ----------------SCHHHH--------------HHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTT
T ss_pred ----------------CChHHH--------------HHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCC
Confidence 233334 899999999999999999999999999999999865 444
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-11 Score=118.70 Aligned_cols=36 Identities=19% Similarity=0.416 Sum_probs=32.0
Q ss_pred CCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcc
Q 018946 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 293 ~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~ 328 (348)
++++++||||+. +||.+|+++||.+|+|.++.....
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~ 325 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEG 325 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTT
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcc
Confidence 679999999998 599999999999999999776544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=107.34 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|+++++|++|||+.||+.+++.+|+.+++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 202 LSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 7889999999999999999999999999999965443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.19 E-value=7.7e-11 Score=107.73 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+++.+++++|+++++|++|||+.||+.+++.+|+.+++
T Consensus 187 ~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam 224 (258)
T 2pq0_A 187 GIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM 224 (258)
T ss_dssp HHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence 37899999999999999999999999999999997664
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.3e-11 Score=111.84 Aligned_cols=40 Identities=8% Similarity=0.210 Sum_probs=36.2
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
++.+++++|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~ 197 (231)
T 1wr8_A 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA 197 (231)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence 8999999999999999999999999999999998 556543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=107.49 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|+++++|++|||+.||+.+++.+|+.+++
T Consensus 207 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 243 (290)
T 3dnp_A 207 LALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM 243 (290)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence 8899999999999999999999999999999986554
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1e-10 Score=107.75 Aligned_cols=38 Identities=5% Similarity=0.086 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+++.+++++|+++++|++|||+.||+.+++.+|+.+++
T Consensus 201 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 3mpo_A 201 TLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM 238 (279)
T ss_dssp HHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC
T ss_pred HHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec
Confidence 37889999999999999999999999999999976443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-11 Score=108.14 Aligned_cols=37 Identities=0% Similarity=-0.019 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|+++++|++|||+.+|+.+++.+|+.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~ 228 (261)
T 2rbk_A 192 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM 228 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence 8899999999999999999999999999999996544
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-09 Score=101.77 Aligned_cols=57 Identities=11% Similarity=0.256 Sum_probs=44.9
Q ss_pred HHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-CchHHHHHHHHcCCcccch
Q 018946 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 208 (348)
Q Consensus 152 ~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-~~~~~~~il~~lgl~~~f~ 208 (348)
.+.+.....+++||+.++|+.|+++|++++|+||.... ....+...++.+|+..+++
T Consensus 92 ~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 92 TKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp HHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred HHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 33334455789999999999999999999999996322 2358888899999987664
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.8e-09 Score=100.79 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=42.0
Q ss_pred CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-CchHHHHHHHHcCCcccch
Q 018946 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 208 (348)
Q Consensus 158 ~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-~~~~~~~il~~lgl~~~f~ 208 (348)
...++.||+.++|+.|+++|++++|+||.... ....+...++++|+..+++
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE 149 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc
Confidence 45688999999999999999999999996321 2368888899999987663
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.2e-09 Score=97.90 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 214 l~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm 250 (285)
T 3pgv_A 214 LEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM 250 (285)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence 7889999999999999999999999999999976443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.87 E-value=9.3e-10 Score=103.40 Aligned_cols=37 Identities=3% Similarity=-0.076 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 233 l~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam 269 (304)
T 3l7y_A 233 LQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM 269 (304)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred HHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence 7889999999999999999999999999999976444
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.86 E-value=2e-09 Score=100.07 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 216 l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 216 LSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 8899999999999999999999999999999976444
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.85 E-value=8.2e-10 Score=102.09 Aligned_cols=39 Identities=10% Similarity=-0.002 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|+++++|++|||+.+|+.+++.+|+.++ +.+
T Consensus 196 ~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~n 234 (271)
T 1rlm_A 196 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGN 234 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTT
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eCC
Confidence 899999999999999999999999999999999644 544
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.6e-09 Score=99.08 Aligned_cols=37 Identities=8% Similarity=0.051 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 205 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 205 IKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp HHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 8889999999999999999999999999999976554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.82 E-value=6.3e-09 Score=96.91 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
+++.+++++|+++++|++|||+.||+.+++.+|+ .|.+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~ 260 (288)
T 1nrw_A 220 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA 260 (288)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence 3888999999999999999999999999999999 5666543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.81 E-value=9.2e-09 Score=93.20 Aligned_cols=39 Identities=10% Similarity=-0.059 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.+
T Consensus 158 l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n 196 (227)
T 1l6r_A 158 VNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPAN 196 (227)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTT
T ss_pred HHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecC
Confidence 7888899999999999999999999999999996 45544
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.81 E-value=2.1e-09 Score=102.65 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=32.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl 203 (348)
..+.|++.++|+.|++ |++++++|+. ....+....+.+++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~---~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTS---YTQYLRRTASMIGV 141 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEE---EHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECC---ceEEEcccchhhhh
Confidence 3569999999999999 9999999983 33556666777766
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.81 E-value=5.3e-09 Score=98.19 Aligned_cols=52 Identities=27% Similarity=0.477 Sum_probs=44.6
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
..+.+.....+++||+.++++.|+++|++++++|++ ....++.+++.+|+..
T Consensus 131 ~~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg---~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 131 LKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAG---IGDVLEEVIRQAGVYH 182 (297)
T ss_dssp HHHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEE---EHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHHHcCCCc
Confidence 344555556889999999999999999999999996 6899999999999863
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.8e-10 Score=100.25 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=80.8
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
+.++||+.+||+.|++. ++++|+|++ ....++.+++.+++..+|+.++. .++....
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss---~~~~a~~vl~~ld~~~~f~~~l~-rd~~~~~------------------- 122 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTAS---LAKYADPVADLLDRWGVFRARLF-RESCVFH------------------- 122 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCCSSCEEEEEC-GGGCEEE-------------------
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCC---CHHHHHHHHHHhCCcccEEEEEE-cccceec-------------------
Confidence 46799999999999998 999999995 67999999999999998887643 3222110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
| ++ |..+++++|.++++||+|||+..++.++.++|+.++.
T Consensus 123 -----------------------k---~~--------------~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 123 -----------------------R---GN--------------YVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp -----------------------T---TE--------------EECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred -----------------------C---Cc--------------eeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 2 33 6677899999999999999999999999999998755
Q ss_pred EC
Q 018946 320 MR 321 (348)
Q Consensus 320 v~ 321 (348)
..
T Consensus 163 ~~ 164 (195)
T 2hhl_A 163 WF 164 (195)
T ss_dssp CS
T ss_pred ec
Confidence 44
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.67 E-value=2.8e-09 Score=94.00 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=77.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.+||+.+++. ++++|+|++ ...+++.+++.+++..+|+.++. .++....
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~---~~~~a~~vl~~ld~~~~f~~~~~-rd~~~~~------------------- 109 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTAS---LAKYADPVADLLDKWGAFRARLF-RESCVFH------------------- 109 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCTTCCEEEEEC-GGGSEEE-------------------
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCC---CHHHHHHHHHHHCCCCcEEEEEe-ccCceec-------------------
Confidence 45799999999999998 999999995 67999999999999988887643 2222110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
| +. |...++.+|.++++||+|||+..++.++.++|+.+
T Consensus 110 -----------------------k---~~--------------~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 110 -----------------------R---GN--------------YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -----------------------T---TE--------------EECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -----------------------C---Cc--------------EeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 1 22 56677899999999999999999999999999985
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=5.1e-08 Score=89.04 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 199 l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam 235 (268)
T 3r4c_A 199 LSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM 235 (268)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence 8899999999999999999999999999999977444
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-07 Score=87.85 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
+++.+++++|++++++++|||+.||+.+++.+|+ .|.+.+
T Consensus 202 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n 241 (282)
T 1rkq_A 202 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDN 241 (282)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecC
Confidence 3788899999999999999999999999999998 455544
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.8e-07 Score=85.54 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPV--RNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p--~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|+++ +++++|||+.||+.+++.+|+.+++
T Consensus 181 l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 219 (259)
T 3zx4_A 181 VARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV 219 (259)
T ss_dssp HHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC
T ss_pred HHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe
Confidence 788899999999 9999999999999999999987444
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.50 E-value=2e-06 Score=84.48 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=37.7
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
.++||++++++.|+++|++++|||++ +...++.+.+.+|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg---~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSAS---FIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCC---cHHHHHHHHHHhCcc
Confidence 36999999999999999999999995 789999999999874
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=9e-07 Score=83.35 Aligned_cols=41 Identities=2% Similarity=0.037 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
+++.+++.+|++++++++|||+.||+.+++.+|+. |.+.++
T Consensus 228 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na 268 (301)
T 2b30_A 228 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA 268 (301)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC
Confidence 37888999999999999999999999999999996 455543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=6.2e-07 Score=91.15 Aligned_cols=126 Identities=10% Similarity=0.096 Sum_probs=82.1
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc-C-------------Ccccchheeecchhhhhhhcc--
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------------SERISKIKIVGNEEVERSLYG-- 223 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l-g-------------l~~~f~~~i~~~~e~~~~~~~-- 223 (348)
+..-|++..+|+.||++| ++.++|| |....+..+++.+ | +.++|+.+|+.+. +..+|+
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTN---S~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~--KP~FF~~~ 318 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATN---SDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR--KPLFFGEG 318 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECS---SCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC--TTGGGTTC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeC---CChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC--CCCcccCC
Confidence 345689999999999999 9999999 5778899999887 7 4578887665442 122222
Q ss_pred ----ccccccccc-CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEE
Q 018946 224 ----QFVLGKGIS-SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 298 (348)
Q Consensus 224 ----~~v~g~~v~-~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i 298 (348)
.+....+.. -+... +..+ ...+|.. .. +..+.+.+|+.+++++
T Consensus 319 ~pfr~Vd~~tg~l~~~~~~----------------------~~l~-~g~vY~g---Gn------~~~~~~llg~~g~eVL 366 (555)
T 2jc9_A 319 TVLRQVDTKTGKLKIGTYT----------------------GPLQ-HGIVYSG---GS------SDTICDLLGAKGKDIL 366 (555)
T ss_dssp CCEEEEETTTTEECSSCCC----------------------SCCC-TTCCEEE---CC------HHHHHHHHTCCGGGEE
T ss_pred CcceEeecCCCcccccccc----------------------cccc-CCceecc---CC------HHHHHHHhCCCCCeEE
Confidence 000000000 00000 0000 0112100 00 4888899999999999
Q ss_pred EEecCH-hhHHHHH-HcCCcEEEECCC
Q 018946 299 LIAGSQ-SGVAGAQ-RIGMPCVVMRSR 323 (348)
Q Consensus 299 ~VGDs~-~Di~aA~-~aG~~~i~v~~~ 323 (348)
+|||+. .||..++ .+||.|++|-..
T Consensus 367 YVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 367 YIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp EEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred EECCEehHhHHhHHhhcCeEEEEEEec
Confidence 999986 7999997 999999999753
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.31 E-value=5.6e-06 Score=76.62 Aligned_cols=42 Identities=5% Similarity=-0.042 Sum_probs=37.0
Q ss_pred HHHHHHHHcC-CCCCc--EEEEecCHhhHHHHHHcCCcEEEECCCC
Q 018946 282 ALRAGAEYAE-KPVRN--CFLIAGSQSGVAGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 282 ~~~~a~~~lg-v~p~~--~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 324 (348)
+++.+++++| +++++ +++|||+.||+.+++.+|+. |.+.++.
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~ 237 (275)
T 1xvi_A 193 AANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLN 237 (275)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC
T ss_pred HHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCC
Confidence 3788889999 99999 99999999999999999995 7776655
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.01 E-value=6.9e-07 Score=87.34 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=42.9
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeec
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVG 213 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~ 213 (348)
+.++||+.+||+.+. +++.++|.|++ ...++..+++.++... +|...+++
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas---~~~yA~~vl~~LDp~~~~f~~ri~s 124 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMG---TKAYAKEVAKIIDPTGKLFQDRVLS 124 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSS---CHHHHHHHHHHHCTTSCSSSSCEEC
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCC---cHHHHHHHHHHhccCCceeeeEEEE
Confidence 567999999999999 67999999995 5799999999999986 77755544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.2e-05 Score=81.91 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=40.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++|++.+.|+.|+++|++++++|+ .....++.+.+.+|++.++.
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~ 501 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIA 501 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEEC
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEE
Confidence 5789999999999999999999999 46788999999999986554
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=6.5e-05 Score=72.10 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=34.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l 201 (348)
.++|++.++++.|+++|+.|+|||++ +...++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas---~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAA---HEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHhhc
Confidence 46999999999999999999999994 789999988874
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.79 E-value=9.6e-05 Score=77.99 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=40.0
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|++.++.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~ 579 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIA 579 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEEC
T ss_pred CcchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCcEEEc
Confidence 6899999999999999999999999 46788999999999986543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00023 Score=77.64 Aligned_cols=115 Identities=14% Similarity=0.148 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch---heeecchhhhhhhcccccccccccCCchh
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~---~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+..... ..++.+++... -.++
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~--------------l~~~ 665 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGENEEVADRAYTGREFDD--------------LPLA 665 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHT--------------SCHH
T ss_pred CCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCCCCCcccceEEEchhhhh--------------CCHH
Confidence 6899999999999999999999999 46788999999999965321 11222222211 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCC-CCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCc
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~-~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 316 (348)
+..++.+ + ..++. -.|+.+..+|..++ + ..+.++|+||+.||+.|.+.||+.
T Consensus 666 ------------~~~~~~~------~--~~v~~r~~P~~K~~~v~~l~---~----~g~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 666 ------------EQREACR------R--ACCFARVEPSHKSKIVEYLQ---S----YDEITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp ------------HHHHHHH------H--CCEEESCCSSHHHHHHHHHH---T----TTCCEEEEECSGGGHHHHHHSTEE
T ss_pred ------------HHHHHHh------h--CcEEEEeCHHHHHHHHHHHH---H----CCCEEEEEcCCchhHHHHHHCCeE
Confidence 0011110 0 11111 13555555543332 2 247899999999999999999997
Q ss_pred EEE
Q 018946 317 CVV 319 (348)
Q Consensus 317 ~i~ 319 (348)
..+
T Consensus 719 iam 721 (995)
T 3ar4_A 719 IAM 721 (995)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=77.68 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=39.8
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+++++.
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~~v~a 598 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIKKVVA 598 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCCCEEC
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCEEEE
Confidence 5789999999999999999999999 46788999999999986543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00059 Score=68.37 Aligned_cols=121 Identities=8% Similarity=0.031 Sum_probs=80.4
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-c--------CCcccchheeecchhhhhhhccc------ccc
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQ------FVL 227 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-l--------gl~~~f~~~i~~~~e~~~~~~~~------~v~ 227 (348)
-|.+..+|+.||++|.++.++||+ .-..+..+++. + ++.++||++|+.+. +..+|.. +.+
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS---~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~--KP~FF~~~~~~~~v~~ 262 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNS---EYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN--KPRFFYDNLRFLSVNP 262 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSS---CHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCC--TTHHHHSCCCEEEECT
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCC---CchHHHHHHHhhcccCCCCCCChhhhcCEEEECCC--CCCcccCCCcceEEEC
Confidence 588999999999999999999994 66777777775 3 46789999887653 2223321 111
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-h
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL-SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 305 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP-~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~ 305 (348)
..+..... .+| .+.+|.... +....+.+|+...++++|||+. .
T Consensus 263 ~~g~l~~~--------------------------~~~~~~~vY~gGn---------~~~l~~llg~~g~~VLY~GDhi~~ 307 (470)
T 4g63_A 263 ENGTMTNV--------------------------HGPIVPGVYQGGN---------AKKFTEDLGVGGDEILYIGDHIYG 307 (470)
T ss_dssp TTCCEEEC--------------------------CSSCCSEEEEECC---------HHHHHHHTTCCGGGEEEEESCCCS
T ss_pred CCCccccc--------------------------ccccCCceeecCc---------HHHHHHHhCCCCCeEEEECCchHH
Confidence 11110000 011 122332211 5566688899999999999996 6
Q ss_pred hHHHHHH-cCCcEEEECCC
Q 018946 306 GVAGAQR-IGMPCVVMRSR 323 (348)
Q Consensus 306 Di~aA~~-aG~~~i~v~~~ 323 (348)
||..++. .||.|++|-..
T Consensus 308 Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 308 DILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CHHHHHHSCCCEEEEECTT
T ss_pred HHHhhhhccCCeEEEEhHH
Confidence 9777765 69999998753
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00043 Score=58.57 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=30.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+.|++.++|+.|+++|+.++|+|+.....-..+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 4579999999999999999999995210123444555566664
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00063 Score=73.60 Aligned_cols=116 Identities=18% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+.+|+.... +..+. ..+.|.....+ +++.
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~~~~----~~~~~-------~~~~g~~~~~~--~el~ 598 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLGTNI----YNAER-------LGLGGGGDMPG--SEVY 598 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSSCSC----CCSSS-------SSSCBCCCGGG--GGGG
T ss_pred cccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCCccc----cCccc-------eeecCcccCCH--HHHH
Confidence 5899999999999999999999999 4678899999999996311 00000 00111100000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCC-CCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~-~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++ -+...++. -.|+.+..+|.+++ +.| +.+.|+||+.||..|.+.|++...+
T Consensus 599 ------------~~--------~~~~~V~arv~P~~K~~iV~~Lq----~~g---~~Vam~GDGvNDapaLk~AdvGIAm 651 (920)
T 1mhs_A 599 ------------DF--------VEAADGFAEVFPQHKYNVVEILQ----QRG---YLVAMTGDGVNDAPSLKKADTGIAV 651 (920)
T ss_dssp ------------TT--------TTTTSCEESCCSTHHHHHHHHHH----TTT---CCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred ------------HH--------HhhCeEEEEeCHHHHHHHHHHHH----hCC---CeEEEEcCCcccHHHHHhCCcCccc
Confidence 00 01111111 13666666654433 234 6899999999999999999997665
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0001 Score=66.20 Aligned_cols=97 Identities=10% Similarity=0.108 Sum_probs=71.6
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc-ccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~-~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
+..+||+.+||+.+. +++.++|.|++ ...++..+++.++.. .+|...+....-. . ..
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas---~~~ya~~vl~~LDp~~~~f~~rl~R~~c~-~------~~----------- 115 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSN---YMMYSDKIAEKLDPIHAFVSYNLFKEHCV-Y------KD----------- 115 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHTSTTCSSEEEEECGGGSE-E------ET-----------
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCC---cHHHHHHHHHHhCCCCCeEEEEEEeccee-E------EC-----------
Confidence 457999999999998 67999999995 679999999999987 4776553311100 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.. |...++.+|.++++||+|+|++..+......|+.+.
T Consensus 116 ----------------------------g~--------------y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 116 ----------------------------GV--------------HIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp ----------------------------TE--------------EECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred ----------------------------Ce--------------eeecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence 01 334557889999999999999998877667776554
Q ss_pred EE
Q 018946 319 VM 320 (348)
Q Consensus 319 ~v 320 (348)
-.
T Consensus 154 ~~ 155 (204)
T 3qle_A 154 PW 155 (204)
T ss_dssp CC
T ss_pred eE
Confidence 33
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0032 Score=68.90 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.5
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 4678889999999986
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00082 Score=55.03 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=23.5
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAY 186 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~ 186 (348)
.+.|++.++|+.++++|++++++|+.
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR 49 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTAR 49 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45688999999999999999999995
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0018 Score=58.88 Aligned_cols=30 Identities=3% Similarity=-0.145 Sum_probs=26.2
Q ss_pred CCCcEEEEecC----HhhHHHHHHcCCcEEEECC
Q 018946 293 PVRNCFLIAGS----QSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 293 ~p~~~i~VGDs----~~Di~aA~~aG~~~i~v~~ 322 (348)
+++++++|||+ .||+.+.+.+|...+.|.+
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 78999999995 9999999999877777754
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00029 Score=67.43 Aligned_cols=41 Identities=22% Similarity=0.410 Sum_probs=36.5
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~ 206 (348)
.+||+.+||+.+.+ .+.++|.|++ ...++..+++.++....
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTas---~~~ya~~vld~Ld~~~~ 205 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSAT---SMRWIEEKMRLLGVASN 205 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECSS---CHHHHHHHHHHTTCTTC
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcCC---cHHHHHHHHHHhCCCCC
Confidence 69999999999995 5999999995 67999999999988654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0012 Score=71.08 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=37.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+++|++.+.++.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 528 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCc
Confidence 5799999999999999999999999 4678888999999995
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.47 E-value=0.01 Score=64.93 Aligned_cols=41 Identities=27% Similarity=0.335 Sum_probs=37.2
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+++|++.+.|+.|+++|++++++|+. ....+..+.+.+|+.
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd---~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGD---HPITAKAIAASVGII 644 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCCC
Confidence 68999999999999999999999994 567888999999985
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0013 Score=59.95 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=33.5
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
++.+++++|+++++|++|||+.+|+.+++.+|+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~ 230 (268)
T 1nf2_A 195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence 889999999999999999999999999999999543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0029 Score=57.11 Aligned_cols=39 Identities=8% Similarity=0.011 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.+
T Consensus 167 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~n 205 (244)
T 1s2o_A 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN 205 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcC
Confidence 7889999999999999999999999999999985 55543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0037 Score=56.47 Aligned_cols=39 Identities=5% Similarity=0.083 Sum_probs=34.8
Q ss_pred HHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv-~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|+ +++++++|||+.||+.+.+.+|+. |.+.+
T Consensus 184 l~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gn 223 (249)
T 2zos_A 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGS 223 (249)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESS
T ss_pred HHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCC
Confidence 7888999998 999999999999999999999996 55554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.026 Score=51.21 Aligned_cols=35 Identities=6% Similarity=-0.071 Sum_probs=24.0
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 167 ~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
.+.|++ +++|++++++|+. ....+..+++.+|+..
T Consensus 25 ~~al~~-~~~Gi~v~iaTGR---~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 25 RRNIEK-LSRKCYVVFASGR---MLVSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHH-HTTTSEEEEECSS---CHHHHHHHHHHHSSSC
T ss_pred HHHHHH-HhCCCEEEEECCC---ChHHHHHHHHHhCCCC
Confidence 356667 7778888888884 4456666777777653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.023 Score=51.11 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=27.8
Q ss_pred HHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 168 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 168 elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
+.|++|+++|++++++|+. ....+..+++.+|+..
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr---~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSK---TRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSS---CHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCCc
Confidence 4777889999999999995 4567777888888753
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.069 Score=48.52 Aligned_cols=51 Identities=22% Similarity=0.206 Sum_probs=39.3
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc-ccchheee
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIV 212 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~-~~f~~~i~ 212 (348)
+.|++.++|+.++++|++++++||........+...++.+|+. ..++.++.
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~ 82 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS 82 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc
Confidence 4689999999999999999999983322456677778889987 66655543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=93.76 E-value=0.032 Score=49.90 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=27.6
Q ss_pred cCCCCCcEEEEec----CHhhHHHHHHcCCcEEEECC
Q 018946 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 290 lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~ 322 (348)
+|++++++++||| +.||+.+.+.+|...+.+.+
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 8999999999999 99999999999986677754
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.53 E-value=0.046 Score=48.95 Aligned_cols=38 Identities=13% Similarity=0.054 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCcEEEE
Q 018946 277 DKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVVM 320 (348)
Q Consensus 277 ~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a--G~~~i~v 320 (348)
.|.. +++.+++++| +++|||+.||+.|.+.+ |..+++=
T Consensus 160 ~Kg~-al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~ 199 (239)
T 1u02_A 160 NKGS-AIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVG 199 (239)
T ss_dssp CHHH-HHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEES
T ss_pred CHHH-HHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEEC
Confidence 3443 3788888888 99999999999999999 8875543
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.049 Score=54.09 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=42.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc-cchheeec
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVG 213 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~-~f~~~i~~ 213 (348)
+..+||+.+||+.+. +.+.++|.|++ ...++..+++.++... +|...+++
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas---~~~YA~~Vl~~LDp~~~~f~~Rl~s 132 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMG---TKAYAKEVAKIIDPTGKLFQDRVLS 132 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHHCTTSTTTTTCEEC
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCC---CHHHHHHHHHHhccCCccccceEEE
Confidence 567999999999998 57999999996 6799999999999886 77765553
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.92 E-value=0.38 Score=43.07 Aligned_cols=49 Identities=29% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhee
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i 211 (348)
.|++.++|+.++++|++++++||............++.+|+....+.++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~ 67 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIII 67 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEE
Confidence 3788899999999999999999964322333444445678764444443
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=90.25 E-value=0.22 Score=44.87 Aligned_cols=32 Identities=0% Similarity=-0.131 Sum_probs=29.2
Q ss_pred cCCCCCcEEEEec----CHhhHHHHHHcCCcEEEEC
Q 018946 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 290 lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~ 321 (348)
+|++++++++||| +.||+.+.+.+|+..+.+.
T Consensus 206 ~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~ 241 (262)
T 2fue_A 206 DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV 241 (262)
T ss_dssp TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec
Confidence 8999999999999 9999999999998667773
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=90.09 E-value=0.14 Score=46.24 Aligned_cols=19 Identities=32% Similarity=0.508 Sum_probs=15.1
Q ss_pred CCceEEEEecCCccccccc
Q 018946 82 PRDLAVLLEVDGVLVDAYR 100 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~ 100 (348)
..+|.|+||+||||++...
T Consensus 11 ~~~kli~~DlDGTLl~~~~ 29 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQ 29 (262)
T ss_dssp --CEEEEEESBTTTBSTTS
T ss_pred cCeEEEEEeCccCCCCCCC
Confidence 3578999999999998654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=89.88 E-value=0.23 Score=44.26 Aligned_cols=23 Identities=13% Similarity=0.184 Sum_probs=17.0
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCC
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAY 186 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~ 186 (348)
.|...++|++|+++| +++++|+.
T Consensus 25 ~~~~~~al~~l~~~g-~v~iaTGR 47 (239)
T 1u02_A 25 DAGLLSLISDLKERF-DTYIVTGR 47 (239)
T ss_dssp CHHHHHHHHHHHHHS-EEEEECSS
T ss_pred CHHHHHHHHHHhcCC-CEEEEeCC
Confidence 455667778888888 88888874
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=88.43 E-value=1.7 Score=37.92 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=27.9
Q ss_pred HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 285 AGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 285 ~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
.-++.-|++ ++|||+.. ...|++.|++++.+.++..
T Consensus 136 ~~l~~~G~~----vvVG~~~~-~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 136 SKVKTENIK----IVVSGKTV-TDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHTTCC----EEEECHHH-HHHHHHTTCEEEECCCCHH
T ss_pred HHHHHCCCe----EEECCHHH-HHHHHHcCCcEEEEecCHH
Confidence 344556777 79998766 7789999999999987543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=84.43 E-value=0.34 Score=43.05 Aligned_cols=20 Identities=30% Similarity=0.516 Sum_probs=16.5
Q ss_pred CCCceEEEEecCCccccccc
Q 018946 81 PPRDLAVLLEVDGVLVDAYR 100 (348)
Q Consensus 81 ~~~~kaviFDvDGTL~d~~~ 100 (348)
+|..|+|+||+||||++...
T Consensus 3 ~~~~kli~~DlDGTLl~~~~ 22 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQ 22 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTS
T ss_pred CCCceEEEEECCCCcCCCCc
Confidence 46789999999999998654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=82.59 E-value=0.51 Score=42.06 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=13.2
Q ss_pred eEEEEecCCcccccc
Q 018946 85 LAVLLEVDGVLVDAY 99 (348)
Q Consensus 85 kaviFDvDGTL~d~~ 99 (348)
..|+||+||||++..
T Consensus 4 ~li~~DlDGTLl~~~ 18 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ 18 (244)
T ss_dssp EEEEECTBTTTBSCH
T ss_pred eEEEEeCCCCCcCCH
Confidence 499999999999865
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=82.52 E-value=9.6 Score=34.94 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
|+.+.+++| +.-.-++|||+..-=+||+..+|+.+-+.+
T Consensus 220 FerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 220 FERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 999999998 446778899999999999999999998874
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=82.34 E-value=12 Score=32.82 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 163 ~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
.|++.++|+.|+++|++++++||........+...++.+|+..
T Consensus 35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4677889999999999999999753234556666778888753
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=82.07 E-value=4.7 Score=36.10 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=26.1
Q ss_pred HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 285 AGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 285 ~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
.-++.-|++ ++|||+.. ...|++.|++++.+.+
T Consensus 148 ~~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 148 NELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSC
T ss_pred HHHHHCCCC----EEECCHHH-HHHHHHcCCcEEEECC
Confidence 344556776 79998766 7789999999999984
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=80.80 E-value=3 Score=38.06 Aligned_cols=50 Identities=10% Similarity=0.153 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc-ccchhee
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKI 211 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~-~~f~~~i 211 (348)
+.|++.++|+.|+++|++++++||............++.+|+. ...+.++
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~ 88 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLF 88 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEE
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEE
Confidence 4578899999999999999999974323456666777888887 3333433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 348 | ||||
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 8e-05 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 4e-04 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 0.004 |
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.5 bits (97), Expect = 8e-05
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207
K L E +A D L+ G E+F GIP+ + +A + V+ + G S
Sbjct: 122 KAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH-S 177
Query: 208 KIKIVGNE 215
+K+V N
Sbjct: 178 NVKVVSNF 185
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 39.4 bits (90), Expect = 4e-04
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ G VD F + F F K G+ TA + D R L
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMP 60
Query: 146 NRKNALDEFL 155
+ +
Sbjct: 61 RIASEWNRVF 70
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 36.3 bits (82), Expect = 0.004
Identities = 25/236 (10%), Positives = 58/236 (24%), Gaps = 18/236 (7%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLG-LDCANWTAPIYTDLLRKSAGDEDRMLVLF 144
+LL+++G F F + + +W + +
Sbjct: 9 VILLDIEGTTTPI-AFVKDILFPYIEENVKEYLQTHWEEEECQQDVS--LLRKQAEEDAH 65
Query: 145 FNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204
+ + + L+ ++ VD+ + TA + + R+ +
Sbjct: 66 LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125
Query: 205 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 264
R + SSG E + E+ +
Sbjct: 126 AEF---FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD---- 178
Query: 265 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320
+ ES KI ++ N + + A+ + V+
Sbjct: 179 TKIGHKVESESYRKIADSIGCSTN-------NILFLTDVTREASAAEEADVHVAVV 227
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 348 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.95 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.95 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.94 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.94 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.93 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.92 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.92 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.91 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.9 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.88 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.87 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.86 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.83 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.78 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.75 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.75 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.72 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.7 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.69 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.68 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.68 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.67 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.67 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.58 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.48 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.46 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.26 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.83 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.81 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.63 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.62 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.54 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.49 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.34 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.33 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.3 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.07 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.06 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.03 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.87 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 97.84 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.75 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.7 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.35 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.28 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.07 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 95.92 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 95.68 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 94.98 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.17 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.26 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 91.77 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 90.63 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 89.73 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 88.36 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 86.91 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 84.79 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 84.4 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 82.69 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 82.23 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 81.3 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.95 E-value=5.2e-29 Score=219.79 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=149.5
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhh------HHHHHHHHH
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN------RKNALDEFL 155 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~ 155 (348)
|.+|+||||+||||+|+... +.++|+++++++|++ +....+...++... ...+...... ..+.+.+++
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFPMAA--EQAMTELGIAASEFDHFQAQYEDVM 74 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTTSCH--HHHHHHTTCCGGGHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcchh--hhhhhccccchhhHHHHHHHhhhhh
Confidence 66899999999999999887 889999999999997 55555555444321 1111111000 023444444
Q ss_pred hcC--CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 156 ASK--DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 156 ~~~--~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
... ..+++||+.++|+.|++ +++++|+||+ ....++.+++++|+.++|+.++. .+++.
T Consensus 75 ~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~---~~~~~~~~l~~~~l~~~f~~i~~-~~~~~--------------- 134 (207)
T d2hdoa1 75 ASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQ---RRNELESGMRSYPFMMRMAVTIS-ADDTP--------------- 134 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHSCT-TSEEEEECSS---CHHHHHHHHTTSGGGGGEEEEEC-GGGSS---------------
T ss_pred cccccccccccchhhhhhhhcc-cccccccccc---ccccccccccccccccccccccc-ccccc---------------
Confidence 432 46789999999999975 6999999995 67999999999999999987643 32221
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
.+||+|++ |+.+++++|++|++|+||||+.+|+.+|+++
T Consensus 135 ---------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~a 173 (207)
T d2hdoa1 135 ---------------------------KRKPDPLP--------------LLTALEKVNVAPQNALFIGDSVSDEQTAQAA 173 (207)
T ss_dssp ---------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ---------------------------cchhhhhh--------------hcccccceeeeccceeEecCCHHHHHHHHHc
Confidence 13999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCCCCcccccccccchhHHHHhh
Q 018946 314 GMPCVVMRSRCITTLPVSKTQRLADMLCRIL 344 (348)
Q Consensus 314 G~~~i~v~~~~~~~~~l~~~~~~~d~l~~~l 344 (348)
||.+|++.++.............++++.+++
T Consensus 174 G~~~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 174 NVDFGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp TCEEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred CCeEEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 9999999988888777776555555554443
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.8e-28 Score=217.09 Aligned_cols=196 Identities=18% Similarity=0.199 Sum_probs=139.9
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH---------------
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR--------------- 147 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------- 147 (348)
+++|||||+||||+|+... +..+|+++++++|++. +... .+..................
T Consensus 2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI---SRRN--ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERV 75 (218)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG---GGGG--GSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHH
T ss_pred cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHHH--HHHHHhCCCccchhhhhhhcccccchhHHHHHHHH
Confidence 5789999999999999886 8899999999999863 2110 01111111111111100000
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
...+.+.+.. ..+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+.++|+.++.+ +++..
T Consensus 76 ~~~~~~~~~~-~~~~~pg~~~~l~~L~~~g~~~~i~T~~---~~~~~~~~l~~~~l~~~F~~i~~~-~~~~~-------- 142 (218)
T d1te2a_ 76 IARAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASAS---PLHMLEKVLTMFDLRDSFDALASA-EKLPY-------- 142 (218)
T ss_dssp HHHHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEC-TTSSC--------
T ss_pred HHHHHHhhhc-cccccchHHHHHHHhhhccccccccccc---cccccccccccccccccccccccc-ccccc--------
Confidence 1222222222 3567999999999999999999999995 678899999999999999976543 33211
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 143 ----------------------------------~Kp~~~~--------------~~~~~~~l~~~~~~~l~igD~~~di 174 (218)
T d1te2a_ 143 ----------------------------------SKPHPQV--------------YLDCAAKLGVDPLTCVALEDSVNGM 174 (218)
T ss_dssp ----------------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEEEESSHHHH
T ss_pred ----------------------------------chhhHHH--------------HHHHHHHcCCCchhcEEEeeCHHHH
Confidence 2999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCCCcccccccccchhHHHHhhcccC
Q 018946 308 AGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKSIT 348 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~l~~~l~~i~ 348 (348)
.+|+++||++|+|..+........ ..++.+++.|.+|+
T Consensus 175 ~aA~~~G~~~i~v~~~~~~~~~~~---~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 175 IASKAARMRSIVVPAPEAQNDPRF---VLANVKLSSLTELT 212 (218)
T ss_dssp HHHHHTTCEEEECCCTTTTTCGGG---GGSSEECSCGGGCC
T ss_pred HHHHHcCCEEEEECCCCCccchhh---cCCCEEECChhhCC
Confidence 999999999999977654433221 12455555565553
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.95 E-value=1.5e-27 Score=210.65 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=141.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHH-HHHhhH--------------
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML-VLFFNR-------------- 147 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~-------------- 147 (348)
.+|+|+||+||||+|+... +..+|+++++++|++. ...+.+....+.......... ......
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFK 79 (224)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCC--CcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHH
Confidence 4689999999999999876 8899999999999873 555555554443221111100 000000
Q ss_pred --HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccc
Q 018946 148 --KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (348)
Q Consensus 148 --~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~ 225 (348)
...+..........++||+.++|..|++.|++++|+||+ ....++.+++.+|+.++|+.++.+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~---~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------- 148 (224)
T d2hsza1 80 RQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSEMLGGQSLP-------- 148 (224)
T ss_dssp HHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECTTTSS--------
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccc---cHHHHHHHHHhcCchhhccccccccccc--------
Confidence 011111112235678999999999999999999999995 5688999999999999998765433221
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh
Q 018946 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (348)
Q Consensus 226 v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~ 305 (348)
..||+|++ |..++++++++|++|+||||+.+
T Consensus 149 -----------------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~~~igD~~~ 179 (224)
T d2hsza1 149 -----------------------------------EIKPHPAP--------------FYYLCGKFGLYPKQILFVGDSQN 179 (224)
T ss_dssp -----------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHH
T ss_pred -----------------------------------cccccchh--------------hHHHHHHhhhhhhccchhcCcHH
Confidence 12999999 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCcccccc
Q 018946 306 GVAGAQRIGMPCVVMRSRCITTLPVSK 332 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~~~l~~ 332 (348)
|+.+|+++||.+|+|.++.+....+..
T Consensus 180 Di~~A~~aG~~~i~v~~g~~~~~~l~~ 206 (224)
T d2hsza1 180 DIFAAHSAGCAVVGLTYGYNYNIPIAQ 206 (224)
T ss_dssp HHHHHHHHTCEEEEESSSCSTTCCGGG
T ss_pred HHHHHHHcCCeEEEEeCCCCCcchhhh
Confidence 999999999999999998877665543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.94 E-value=9e-28 Score=212.94 Aligned_cols=179 Identities=17% Similarity=0.201 Sum_probs=131.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCc--------------HHHHHHHHhhHH
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD--------------EDRMLVLFFNRK 148 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~ 148 (348)
++|+|+||+||||+|+... +..+|+++++++|++. ........+.+..... .+..........
T Consensus 1 MikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKN 77 (221)
T ss_dssp CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCC--ChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHH
Confidence 3689999999999998887 8899999999999874 3333322222211110 111111000002
Q ss_pred HHHHHHHhc-CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 149 NALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 149 ~~~~~~~~~-~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
..+.+.+.. ...+++||+.++|+.|++.|++++++||+ ......++.+|+..+|+.++.+.+ ..
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~-----~~~~~~l~~~~l~~~f~~i~~~~~-~~--------- 142 (221)
T d1o08a_ 78 DNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPAE-VA--------- 142 (221)
T ss_dssp HHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCGGGCSEECCTTT-SS---------
T ss_pred hhccccccccccccccCCceeccccccccccceEEEeec-----chhhHHHHhhcccccccccccccc-cc---------
Confidence 233333322 23568999999999999999999999995 346789999999999987654332 21
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.+||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 143 ---------------------------------~~KP~~~~--------------~~~~l~~~~i~~~~~l~VgD~~~di 175 (221)
T d1o08a_ 143 ---------------------------------ASKPAPDI--------------FIAAAHAVGVAPSESIGLEDSQAGI 175 (221)
T ss_dssp ---------------------------------SCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred ---------------------------------ccccChHH--------------HHHHHHHcCCCCceEEEEecCHHHH
Confidence 13999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCCCC
Q 018946 308 AGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~~~ 326 (348)
.+|+++||++|+|.++...
T Consensus 176 ~~A~~aG~~~i~v~~~~~~ 194 (221)
T d1o08a_ 176 QAIKDSGALPIGVGRPEDL 194 (221)
T ss_dssp HHHHHHTCEEEEESCHHHH
T ss_pred HHHHHcCCEEEEECChhhc
Confidence 9999999999999875433
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=1.1e-26 Score=203.97 Aligned_cols=172 Identities=19% Similarity=0.230 Sum_probs=129.8
Q ss_pred eEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHH-HhcccCcHHHHHHHHhhH--------HHHHHHHH
Q 018946 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL-LRKSAGDEDRMLVLFFNR--------KNALDEFL 155 (348)
Q Consensus 85 kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 155 (348)
+|+|||+||||+|+... +..+|+++++++|++ ++.+..... .+.. ........... ...+..+.
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFKYS---VQDLLVRVAEDRNLDVEVLNQVRAQSL 74 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHHSC---HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhhcccc---cccccccccchhhhhHHHHHHHHHHHH
Confidence 59999999999999876 789999999999997 444433333 2322 11221111111 12223333
Q ss_pred hc--CCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 156 AS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 156 ~~--~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.. ....++||+.++|+.|+++|++++|+||+ . ..+..+++++|+.++|+.++. .+++.
T Consensus 75 ~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~---~-~~~~~~l~~~gl~~~f~~i~~-s~~~~--------------- 134 (204)
T d2go7a1 75 AEKNAQVVLMPGAREVLAWADESGIQQFIYTHK---G-NNAFTILKDLGVESYFTEILT-SQSGF--------------- 134 (204)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECSS---C-THHHHHHHHHTCGGGEEEEEC-GGGCC---------------
T ss_pred HhhcccCcccchHHhhhhcccccccchhhhccc---c-hhhhhhhhhcccccccccccc-ccccc---------------
Confidence 22 24667999999999999999999999995 3 345678999999999987653 33321
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++
T Consensus 135 ---------------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~ 173 (204)
T d2go7a1 135 ---------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNS 173 (204)
T ss_dssp ---------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ---------------------------ccchhHHH--------------HHHHHHHhCCCCceEEEEeCCHHHHHHHHHc
Confidence 13999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCC
Q 018946 314 GMPCVVMRSRC 324 (348)
Q Consensus 314 G~~~i~v~~~~ 324 (348)
||++|++.++.
T Consensus 174 G~~~i~v~~~~ 184 (204)
T d2go7a1 174 GIQSINFLEST 184 (204)
T ss_dssp TCEEEESSCCS
T ss_pred CCeEEEEcCCC
Confidence 99999998764
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.94 E-value=3.7e-27 Score=214.16 Aligned_cols=180 Identities=17% Similarity=0.100 Sum_probs=132.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcH-----------HHHH----------
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-----------DRML---------- 141 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~-----------~~~~---------- 141 (348)
++|+||||+||||+|+....+..+|.++|+++|++ .+.+.+...++...... ....
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA 77 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCC---CCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHH
Confidence 36899999999999987654578999999999987 44443332222110000 0000
Q ss_pred --HHHhh-HHHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhh
Q 018946 142 --VLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 218 (348)
Q Consensus 142 --~~~~~-~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~ 218 (348)
..... ....+.+.+. ....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|...+++++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~---~~~~~~~~l~~~~l~~~f~d~~~~~d~~~ 153 (257)
T d1swva_ 78 DIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGY---TREMMDIVAKEAALQGYKPDFLVTPDDVP 153 (257)
T ss_dssp HHHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSS---CHHHHHHHHHHHHHTTCCCSCCBCGGGSS
T ss_pred HHHHHHHHHHHHHHHHhh-ccCccCCcHHHHHHHHHhcccceeecCCC---chhhHHHHHHHHhhccccccccccccccc
Confidence 00000 0122333322 34578999999999999999999999995 67899999999999988744444444432
Q ss_pred hhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCC-CCcE
Q 018946 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 297 (348)
Q Consensus 219 ~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~-p~~~ 297 (348)
. +||+|++ |..+++++|+. +++|
T Consensus 154 ~------------------------------------------~KP~p~~--------------~~~~~~~l~~~p~~~~ 177 (257)
T d1swva_ 154 A------------------------------------------GRPYPWM--------------CYKNAMELGVYPMNHM 177 (257)
T ss_dssp C------------------------------------------CTTSSHH--------------HHHHHHHHTCCSGGGE
T ss_pred c------------------------------------------cccChHH--------------HHHHHHHhCCCCcceE
Confidence 2 3999999 99999999996 5899
Q ss_pred EEEecCHhhHHHHHHcCCcEEEECCCCC
Q 018946 298 FLIAGSQSGVAGAQRIGMPCVVMRSRCI 325 (348)
Q Consensus 298 i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 325 (348)
+||||+.+||.+|+++||.+|+|.++..
T Consensus 178 v~VgDs~~Di~aA~~aG~~ti~v~~G~~ 205 (257)
T d1swva_ 178 IKVGDTVSDMKEGRNAGMWTVGVILGSS 205 (257)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred EEEeCChhhHHHHHHCCCEEEEEccCCC
Confidence 9999999999999999999999998864
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=4.3e-26 Score=198.80 Aligned_cols=173 Identities=16% Similarity=0.162 Sum_probs=130.8
Q ss_pred CCceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH----HHHHHHHHh-
Q 018946 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----KNALDEFLA- 156 (348)
Q Consensus 82 ~~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~- 156 (348)
|.+|+||||+||||+|+... +..+|+++++++|++ ++.......++.... ......... .+.+.+...
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 73 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKVSTP---FAIETFAPNLENFLEKYKENEAR 73 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHCHH---HHHHHHCTTCTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCC---ccHHHHHhhhhccch---hhhhhhhHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 889999999999997 666666665554321 111111000 122222221
Q ss_pred -cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCc
Q 018946 157 -SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (348)
Q Consensus 157 -~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~ 235 (348)
.....++||+.++|+.|+++|++++|+||+ .... ...++++++..+|+.++. ++++..
T Consensus 74 ~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~---~~~~-~~~l~~~~l~~~fd~i~~-~~~~~~---------------- 132 (187)
T d2fi1a1 74 ELEHPILFEGVSDLLEDISNQGGRHFLVSHR---NDQV-LEILEKTSIAAYFTEVVT-SSSGFK---------------- 132 (187)
T ss_dssp HTTSCCBCTTHHHHHHHHHHTTCEEEEECSS---CTHH-HHHHHHTTCGGGEEEEEC-GGGCCC----------------
T ss_pred HhhcCcccchhHHHHHHHHhhhccccccccC---ccch-hhhhhhhccccccccccc-cccccc----------------
Confidence 234678999999999999999999999995 3444 457899999999997643 333321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 018946 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (348)
Q Consensus 236 ~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 315 (348)
.||+|++ |+.+++++++ ++|+||||+..|+.+|+++|+
T Consensus 133 --------------------------~KP~p~~--------------~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 133 --------------------------RKPNPES--------------MLYLREKYQI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp --------------------------CTTSCHH--------------HHHHHHHTTC--SSEEEEESSHHHHHHHHHTTC
T ss_pred --------------------------cCCCHHH--------------HHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCC
Confidence 2999999 9999999986 469999999999999999999
Q ss_pred cEEEECCCC
Q 018946 316 PCVVMRSRC 324 (348)
Q Consensus 316 ~~i~v~~~~ 324 (348)
++|++.++.
T Consensus 171 ~~i~v~~~~ 179 (187)
T d2fi1a1 171 DTHLFTSIV 179 (187)
T ss_dssp EEEECSCHH
T ss_pred EEEEECCCC
Confidence 999998643
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=9.3e-26 Score=198.28 Aligned_cols=181 Identities=15% Similarity=0.221 Sum_probs=135.7
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHhhH------HHHHHHHHh
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR------KNALDEFLA 156 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 156 (348)
.+++|+||+||||+|+... +..+|+++++++|++. .+.+.+..+.+.. ........+.. ...+.+.+.
T Consensus 3 ~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFMGPP---LESSFATCLSKDQISEAVQIYRSYYK 76 (210)
T ss_dssp TCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTSSSC---HHHHHHTTSCGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHhhhcc---hhhhccccccchhhHHHHHHHHHHHH
Confidence 4689999999999999876 7899999999999873 4455444433321 11111110000 111111111
Q ss_pred ---cCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccC
Q 018946 157 ---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 157 ---~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.....++||+.++|+.++.+ ++++|+||+ +...++.+++.+|+..+|+.++.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~gl~~~fd~v~~~~~~----------------- 135 (210)
T d2ah5a1 77 AKGIYEAQLFPQIIDLLEELSSS-YPLYITTTK---DTSTAQDMAKNLEIHHFFDGIYGSSPE----------------- 135 (210)
T ss_dssp HTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEECSS-----------------
T ss_pred hhhhhcccchhHHHHHHhhhhcc-cchhhcccc---cchhhhHHHHhhccccccccccccccc-----------------
Confidence 23467899999999999987 599999995 789999999999999999876533221
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++
T Consensus 136 ----------------------------~~~~p~~--------------~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~a 173 (210)
T d2ah5a1 136 ----------------------------APHKADV--------------IHQALQTHQLAPEQAIIIGDTKFDMLGARET 173 (210)
T ss_dssp ----------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ----------------------------ccccccc--------------cchhhhhhhcccccceeecCCHHHHHHHHHc
Confidence 1788888 9999999999999999999999999999999
Q ss_pred CCcEEEECCCCCCcccccc
Q 018946 314 GMPCVVMRSRCITTLPVSK 332 (348)
Q Consensus 314 G~~~i~v~~~~~~~~~l~~ 332 (348)
|+++|+|.++....+++..
T Consensus 174 Gi~~i~v~~g~~~~~~l~~ 192 (210)
T d2ah5a1 174 GIQKLAITWGFGEQADLLN 192 (210)
T ss_dssp TCEEEEESSSSSCHHHHHT
T ss_pred CCeEEEEcCCCCCHHHHHh
Confidence 9999999988877666643
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.92 E-value=1.6e-25 Score=198.35 Aligned_cols=178 Identities=17% Similarity=0.150 Sum_probs=133.3
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHH-HHHhcccCcHHHHHHHHhhH----------HHHHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNR----------KNALD 152 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~----------~~~~~ 152 (348)
+|+||||+||||+|++.. +..+|+++++++|++ ++.+.+. .+.+................ ...+.
T Consensus 2 ~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLD 77 (222)
T ss_dssp CSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHhhhccccccccccccccccccccchhHHHHHHH
Confidence 689999999999999887 889999999999997 5544443 33333221111111111110 12222
Q ss_pred HHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 153 ~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
+.+. ....+.||+.++|+.|+. +.+|+||+ ....+..+++++|+.++|+..+++.++....
T Consensus 78 ~~~~-~~~~~~~g~~~~L~~l~~---~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~------------ 138 (222)
T d2fdra1 78 MRLE-RDVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD------------ 138 (222)
T ss_dssp HHHH-HHCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT------------
T ss_pred HHhh-hccchhhhHHHHhhhccc---cceeeeec---chhhhhhhhcccccccccceeeccccccccc------------
Confidence 3222 236789999999988854 56899995 6789999999999999999877766543221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 312 (348)
..||+|++ |..+++++|++|++|+||||+..|+.+|++
T Consensus 139 ----------------------------~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~ 176 (222)
T d2fdra1 139 ----------------------------RVKPKPDI--------------FLHGAAQFGVSPDRVVVVEDSVHGIHGARA 176 (222)
T ss_dssp ----------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred ----------------------------ccccCHHH--------------HHHHHHhhCCCCceEEEEcCCHHHHHHHHH
Confidence 23999999 999999999999999999999999999999
Q ss_pred cCCcEEEECCCCCC
Q 018946 313 IGMPCVVMRSRCIT 326 (348)
Q Consensus 313 aG~~~i~v~~~~~~ 326 (348)
+||.+|+|.++...
T Consensus 177 aG~~~i~v~~~~~~ 190 (222)
T d2fdra1 177 AGMRVIGFTGASHT 190 (222)
T ss_dssp TTCEEEEECCSTTC
T ss_pred cCCEEEEEccCCCC
Confidence 99999999887643
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.91 E-value=5.7e-25 Score=196.14 Aligned_cols=188 Identities=15% Similarity=0.203 Sum_probs=129.2
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHc-CCCCC----CCC----HHHHHHHHhcccCcHHHHHHHHhhH----HHH
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCA----NWT----APIYTDLLRKSAGDEDRMLVLFFNR----KNA 150 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~-gl~~~----~~~----~~~~~~l~~~~~~~~~~~~~~~~~~----~~~ 150 (348)
.|.||||+||||+|+... +..+|.+++.+. |.... .+. .....+.+................. ...
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 478999999999999987 888999887774 44321 111 1222223332222222111111111 122
Q ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHCC-CcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccc
Q 018946 151 LDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (348)
Q Consensus 151 ~~~~~~~~~~~l~pGv~elL~~Lk~~G-i~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~ 229 (348)
+.+.......+++||+.++|+.|+++| ++++|+||+ ....+..+++.+|+.++|+.++.+.+ +..
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~---~~~~~~~~l~~~gl~~~fd~i~~~~~-~~~---------- 146 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFGAFADD-ALD---------- 146 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCEECTTT-CSS----------
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCC---cchhhhhhhhhhcccccccccccccc-ccc----------
Confidence 233222334678999999999999997 899999995 67889999999999999997654332 211
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHc---CCCCCcEEEEecCHhh
Q 018946 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA---EKPVRNCFLIAGSQSG 306 (348)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~l---gv~p~~~i~VGDs~~D 306 (348)
.||.|++ +...++.+ +++|++|+||||+.+|
T Consensus 147 --------------------------------~k~~p~~--------------~~~~~~~~~~~~~~p~~~l~VGD~~~D 180 (228)
T d2hcfa1 147 --------------------------------RNELPHI--------------ALERARRMTGANYSPSQIVIIGDTEHD 180 (228)
T ss_dssp --------------------------------GGGHHHH--------------HHHHHHHHHCCCCCGGGEEEEESSHHH
T ss_pred --------------------------------ccchhHH--------------HHHHhhhhcccCCChhHheeecCChHH
Confidence 1677776 55444444 7899999999999999
Q ss_pred HHHHHHcCCcEEEECCCCCCcccccc
Q 018946 307 VAGAQRIGMPCVVMRSRCITTLPVSK 332 (348)
Q Consensus 307 i~aA~~aG~~~i~v~~~~~~~~~l~~ 332 (348)
+.+|+++||++|+|.++....+++..
T Consensus 181 i~aA~~aG~~~i~v~~g~~~~~~l~~ 206 (228)
T d2hcfa1 181 IRCARELDARSIAVATGNFTMEELAR 206 (228)
T ss_dssp HHHHHTTTCEEEEECCSSSCHHHHHT
T ss_pred HHHHHHcCCEEEEEcCCCCCHHHHhh
Confidence 99999999999999988776665543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3e-24 Score=190.54 Aligned_cols=128 Identities=10% Similarity=0.029 Sum_probs=102.0
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|..|+++|++++|+||+ .....+..++.+|+.++++....+.+++.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------------------- 181 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSG---SVEAQKLLFGHSTEGDILELVDGHFDTKI-------------------- 181 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHTBTTBCCGGGCSEEECGGG--------------------
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCC---cHHHHHHHHHHcCcchhhhhcceeecccc--------------------
Confidence 4568999999999999999999999996 56888899999999998886544332221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|.+ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 182 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti 225 (253)
T d1zs9a1 182 ----------------------GHKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 225 (253)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ----------------------ccCCCcHH--------------HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEE
Confidence 12999999 999999999999999999999999999999999999
Q ss_pred EECCCCCCcccccccccchhHHHHhhccc
Q 018946 319 VMRSRCITTLPVSKTQRLADMLCRILKSI 347 (348)
Q Consensus 319 ~v~~~~~~~~~l~~~~~~~d~l~~~l~~i 347 (348)
+|..+.+....... ..++.++++|+||
T Consensus 226 ~v~r~g~~~~~~~~--~~~~~~i~sl~EL 252 (253)
T d1zs9a1 226 VVVRPGNAGLTDDE--KTYYSLITSFSEL 252 (253)
T ss_dssp EECCTTCCCCCHHH--HHHSCEESSGGGC
T ss_pred EEeCCCCCCCchhh--cCCCcEECChHHh
Confidence 99865544332221 1244456666654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=1.3e-23 Score=185.02 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=97.3
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++|++.++++.+++.|++++++||+ .....+..++.+++..+|+.++.+.+..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~---~~~~~~~~~~~~~~~~~fd~~~~s~~~~--------------------- 146 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHLLSVDPVQ--------------------- 146 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEESGGGT---------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecch---HHHHHHHHHhhccccccccceeeeeeee---------------------
Confidence 4568999999999999999999999995 5788899999999999999876655422
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|++ |+.+++++|++|++|+||||+..||.+|+++||++|
T Consensus 147 ----------------------~~KP~p~~--------------~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 147 ----------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------ccccHHHH--------------HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 13999999 999999999999999999999999999999999999
Q ss_pred EECCCCCCcccc
Q 018946 319 VMRSRCITTLPV 330 (348)
Q Consensus 319 ~v~~~~~~~~~l 330 (348)
+|..+.....+.
T Consensus 191 ~v~r~~~~~~~~ 202 (220)
T d1zrna_ 191 WINRTGNVFEEM 202 (220)
T ss_dssp EECTTCCCCCSS
T ss_pred EEcCCCCCcccc
Confidence 998655444443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.90 E-value=4.1e-23 Score=184.43 Aligned_cols=127 Identities=12% Similarity=0.165 Sum_probs=102.7
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
..++||+.++|+.|+ +|++++++||+ ....++.+++.+|+.++|+.++.+.+ +.
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~~-~~--------------------- 152 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDS---DTEYLMAHLDALGIKDLFDSITTSEE-AG--------------------- 152 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEEHHH-HT---------------------
T ss_pred CcccccHHHHHHHhh-ccCceeeeecc---ccccchhhhccccccccccccccccc-cc---------------------
Confidence 568999999999997 57999999996 57889999999999999998765432 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEE
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i 318 (348)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++|
T Consensus 153 ---------------------~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v 197 (230)
T d1x42a1 153 ---------------------FFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (230)
T ss_dssp ---------------------BCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred ---------------------ccchhhHH--------------HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEE
Confidence 23999999 9999999999999999999985 79999999999999
Q ss_pred EECCCCCCcccccccccc---hhHHHHhhccc
Q 018946 319 VMRSRCITTLPVSKTQRL---ADMLCRILKSI 347 (348)
Q Consensus 319 ~v~~~~~~~~~l~~~~~~---~d~l~~~l~~i 347 (348)
++............++.+ ..++.+.|.+|
T Consensus 198 ~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 198 LLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp EECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred EECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 998765555444444443 45555555544
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=1.3e-22 Score=182.17 Aligned_cols=104 Identities=14% Similarity=0.253 Sum_probs=88.4
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++||+.++|+.|+ +|++++|+||+ ....++..++.+|+..+|+.++.+.+ +.
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~s~~-~~-------------------- 161 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTNG---DRQTQREKIEACACQSYFDAIVIGGE-QK-------------------- 161 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEECS---CHHHHHHHHHHHTCGGGCSEEEEGGG-SS--------------------
T ss_pred cCccCccHHHHHHHhh-cccceEEeecc---cchhhhhhhhhccccccccccccccc-cc--------------------
Confidence 4678999999999998 57999999996 56888999999999999987754432 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 317 (348)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++
T Consensus 162 ----------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~ 205 (247)
T d2gfha1 162 ----------------------EEKPAPSI--------------FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 205 (247)
T ss_dssp ----------------------SCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSE
T ss_pred ----------------------cchhhhhh--------------HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeE
Confidence 12999999 9999999999999999999996 7999999999986
Q ss_pred EEECCC
Q 018946 318 VVMRSR 323 (348)
Q Consensus 318 i~v~~~ 323 (348)
+++.++
T Consensus 206 ~~~~~~ 211 (247)
T d2gfha1 206 TVWINK 211 (247)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 654433
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7e-23 Score=178.80 Aligned_cols=109 Identities=10% Similarity=0.024 Sum_probs=89.9
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-CchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++||+.++|..|+++|++++++||+..+ .....+......++.++|+.++.+.+ +
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~-~--------------------- 155 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQ-V--------------------- 155 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHH-H---------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccc-c---------------------
Confidence 568999999999999999999999997532 22344555667788888887754332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
+.+||+|++ |+.+++.+|++|++|+||||+..||.+|+++||++|
T Consensus 156 ---------------------~~~KP~~~~--------------~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti 200 (225)
T d1zd3a1 156 ---------------------GMVKPEPQI--------------YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTI 200 (225)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ---------------------ccchhHHHH--------------HHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEE
Confidence 134999999 999999999999999999999999999999999999
Q ss_pred EECCCCC
Q 018946 319 VMRSRCI 325 (348)
Q Consensus 319 ~v~~~~~ 325 (348)
+|.++..
T Consensus 201 ~v~~~~~ 207 (225)
T d1zd3a1 201 LVQDTDT 207 (225)
T ss_dssp ECSSHHH
T ss_pred EECCcch
Confidence 9986543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.87 E-value=1.1e-22 Score=181.56 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=89.6
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
...++|++.++|+.|+ |+.++++||. ....+...++.+|+..+|+.++.+.+ +.
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~---~~~~~~~~~~~~~~~~~fd~v~~s~~-~~-------------------- 144 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNG---APDMLQALVANAGLTDSFDAVISVDA-KR-------------------- 144 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGGG-GT--------------------
T ss_pred ccccchhhhHHHHHHh--hhceeEEecc---chHHHHHHHhhccccccccccccccc-cc--------------------
Confidence 4678999999999885 6899999995 67888999999999999997755443 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|++ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 145 ----------------------~~KP~p~~--------------f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv 188 (245)
T d1qq5a_ 145 ----------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (245)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------ccCccHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EECCC
Q 018946 319 VMRSR 323 (348)
Q Consensus 319 ~v~~~ 323 (348)
+|..+
T Consensus 189 ~v~r~ 193 (245)
T d1qq5a_ 189 RVARL 193 (245)
T ss_dssp EECCS
T ss_pred EEcCC
Confidence 99754
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=4.1e-23 Score=181.83 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=92.5
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCC-CCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGK-SGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~-~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++||+.++|+.|+++|++++++||... .........+..+|+..+|+.++.+. ++.
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~-~~~-------------------- 154 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESC-QVG-------------------- 154 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHH-HHS--------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehh-hcc--------------------
Confidence 56899999999999999999999998532 23456677778899999999775433 221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
.+||+|++ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 155 ----------------------~~KP~p~~--------------~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti 198 (222)
T d1cr6a1 155 ----------------------MIKPEPQI--------------YNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198 (222)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEE
T ss_pred ----------------------CCCCChHH--------------HHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EECCCCCC
Q 018946 319 VMRSRCIT 326 (348)
Q Consensus 319 ~v~~~~~~ 326 (348)
+|.++...
T Consensus 199 ~V~~~~~~ 206 (222)
T d1cr6a1 199 LVHNTASA 206 (222)
T ss_dssp ECCSSSHH
T ss_pred EECCcchH
Confidence 99875543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=2e-21 Score=166.53 Aligned_cols=104 Identities=13% Similarity=0.199 Sum_probs=89.6
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
.+.++||+.++|+.|+++|++++|+||. +.....+..++.+++..+|..+..
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~--~~~~~~~~~l~~~~~~~~~~~~~~-------------------------- 95 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRT--SEIQGANQLLELFDLGKYFIQREI-------------------------- 95 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECC--SCHHHHHHHHHHTTCGGGCSEEEE--------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEecc--ccchhhccchhcccccccceeeec--------------------------
Confidence 3678999999999999999999999985 234567778899999888775421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
..||+|++ |..+++++|++|++|+||||+..|+.+|+++||.+|
T Consensus 96 ----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i 139 (164)
T d1u7pa_ 96 ----------------------YPGSKVTH--------------FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI 139 (164)
T ss_dssp ----------------------SSSCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ----------------------ccCCChHH--------------HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence 12888888 999999999999999999999999999999999999
Q ss_pred EECCCCCC
Q 018946 319 VMRSRCIT 326 (348)
Q Consensus 319 ~v~~~~~~ 326 (348)
+|.++.+.
T Consensus 140 ~v~~G~~~ 147 (164)
T d1u7pa_ 140 HIRDGMSL 147 (164)
T ss_dssp ECSSCCCH
T ss_pred EECCCCCh
Confidence 99988743
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=9.7e-22 Score=167.31 Aligned_cols=175 Identities=11% Similarity=0.137 Sum_probs=114.4
Q ss_pred EEEEecCCccccccccChHHHHHHHHHHcCCCCC-----CCCHHHHHHHHhcccCcHHHHHHHHhhH------HHHHHHH
Q 018946 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-----NWTAPIYTDLLRKSAGDEDRMLVLFFNR------KNALDEF 154 (348)
Q Consensus 86 aviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~ 154 (348)
.+|||+||||+|+... ..+..+....+++.. .+....+....... ............. .....+.
T Consensus 2 l~iFDlDgtL~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
T d2b0ca1 2 LYIFDLGNVIVDIDFN---RVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGE-ISDEAFAEALCHEMALPLSYEQFSHG 77 (197)
T ss_dssp EEEECCBTTTEEEETH---HHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTC-SCHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred EEEEeCCCCcCcCHHH---HHHHHHHHHhCCCHHHHHHHHhcccHHHHHHhcc-ccHHHHHHHHhhhhccchhHHHHHHH
Confidence 5789999999997642 455555555565410 00111111111111 1111111111111 2233333
Q ss_pred HhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHc-CCcccchheeecchhhhhhhcccccccccccC
Q 018946 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-GSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (348)
Q Consensus 155 ~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~l-gl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~ 233 (348)
.......+.+|+.+++..++.+|++++++||+. .......+..+ |+.++|+.++.+.+ .
T Consensus 78 ~~~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~---~~~~~~~~~~~~~l~~~fd~v~~s~~-~---------------- 137 (197)
T d2b0ca1 78 WQAVFVALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEIRDAADHIYLSQD-L---------------- 137 (197)
T ss_dssp HHTCEEEECHHHHHHHHHHHHTTCEEEEEECCC---CCTTSCCGGGCHHHHHHCSEEEEHHH-H----------------
T ss_pred HHHhccccCchhHHHHHHHHhcCCeEEEEeCcc---HHHHHHHHHHcccchhhccceeeccc-c----------------
Confidence 333345689999999999999999999999963 33344445554 78888887654332 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 018946 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (348)
Q Consensus 234 ~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 313 (348)
+..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++
T Consensus 138 --------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~l~vgDs~~di~~A~~a 177 (197)
T d2b0ca1 138 --------------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQL 177 (197)
T ss_dssp --------------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTT
T ss_pred --------------------------cccccchHH--------------HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHc
Confidence 123999999 9999999999999999999999999999999
Q ss_pred CCcEEEECCCC
Q 018946 314 GMPCVVMRSRC 324 (348)
Q Consensus 314 G~~~i~v~~~~ 324 (348)
||++|+|..+.
T Consensus 178 G~~ti~v~~~~ 188 (197)
T d2b0ca1 178 GITSILVKDKT 188 (197)
T ss_dssp TCEEEECCSTT
T ss_pred CCEEEEECCCC
Confidence 99999997643
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=1.6e-19 Score=158.03 Aligned_cols=50 Identities=6% Similarity=0.027 Sum_probs=46.8
Q ss_pred CCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCCC
Q 018946 263 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCIT 326 (348)
Q Consensus 263 KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 326 (348)
||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||++|+|..+.+.
T Consensus 159 KP~p~~--------------f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~ 208 (225)
T d2g80a1 159 KTETQS--------------YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNA 208 (225)
T ss_dssp TTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSC
T ss_pred CCChhH--------------hHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCC
Confidence 999999 99999999999999999999999999999999999999765433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=5.8e-18 Score=153.63 Aligned_cols=73 Identities=11% Similarity=0.108 Sum_probs=65.2
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
.+||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|......+......+|+
T Consensus 174 ~~KP~p~~--------------~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~ 239 (250)
T d2c4na1 174 VGKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSW 239 (250)
T ss_dssp CSTTSTHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSE
T ss_pred cccchhhh--------------HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCE
Confidence 46999999 9999999999999999999997 59999999999999999998887777765556888
Q ss_pred HHHhhccc
Q 018946 340 LCRILKSI 347 (348)
Q Consensus 340 l~~~l~~i 347 (348)
+++++.+|
T Consensus 240 i~~sl~eL 247 (250)
T d2c4na1 240 IYPSVAEI 247 (250)
T ss_dssp EESSGGGC
T ss_pred EECCHHHh
Confidence 88888876
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.75 E-value=1e-18 Score=154.62 Aligned_cols=175 Identities=14% Similarity=0.166 Sum_probs=109.5
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHH---h-hHHHHHHHHHhcCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---F-NRKNALDEFLASKD 159 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~ 159 (348)
..+|+|||||||++++.+ ..+++.++.+ .| ..+..............+.... . .....+...... .
T Consensus 4 k~lVifD~DGTL~~~d~~------~~~~~~~~~~--~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 73 (226)
T d2feaa1 4 KPFIICDFDGTITMNDNI------INIMKTFAPP--EW-MALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLE-D 73 (226)
T ss_dssp CEEEEECCTTTTBSSCHH------HHHHHHHSCT--HH-HHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHH-H
T ss_pred CeEEEEeCCCCCcCchHH------HHHHHHHCcc--hH-HHHHHHHHcCcccHHHHHHHHHHHhccccHHHHHHHHHh-c
Confidence 458999999999987643 4455555654 12 2222222221111111111110 0 002233333322 3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe--eecchhhhhhhcccccccccccCCchh
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK--IVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~--i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
.+++||+.++++.|+++|++++++||+ ....++.+++++|+.+++... .+.++..... ........
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~---~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~----~~~~~~~~----- 141 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGG---MDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID----WPHSCKGT----- 141 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEE---EHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE----CTTCCCTT-----
T ss_pred cchhHHHHHHHHHHHhcccccccCCcc---hhhhHHHHHHHcCCccceeeeeEEEeCCcceec----cccccccc-----
Confidence 679999999999999999999999995 789999999999987765321 1111111000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
..||.+.. ...+++++++++++|+||||+.+|+.||++||+..
T Consensus 142 -----------------------~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 142 -----------------------CSNQCGCC--------------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp -----------------------CCSCCSSC--------------HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred -----------------------cccCCHHH--------------HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 12666666 78889999999999999999999999999999754
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.72 E-value=7.2e-18 Score=150.74 Aligned_cols=54 Identities=9% Similarity=0.124 Sum_probs=49.6
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCCCCCcc
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTL 328 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 328 (348)
++||+|.| +..+++++++++++|+||||+.+||++|++|||++|++.++.....
T Consensus 127 ~rKP~p~m--------------l~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~ 180 (209)
T d2o2xa1 127 MRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQ 180 (209)
T ss_dssp TSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEE
T ss_pred cccccchh--------------hhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCccc
Confidence 56999999 9999999999999999999999999999999999999988765433
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=1.2e-17 Score=143.55 Aligned_cols=111 Identities=12% Similarity=0.151 Sum_probs=75.3
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCC-----Cc-------hHHHHHHHHcCCcccchheeecchhhhhhhcccccc
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GD-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~-----~~-------~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~ 227 (348)
+.+.||+.++|+.|+++|++++++||.+.- .. ......+...|+.. +.+.++. .+.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~i~~~~----------~~~ 96 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF--DEVLICP----------HLP 96 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCE--EEEEEEC----------CCG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccccccc--ceeeecc----------ccc
Confidence 568999999999999999999999995200 00 11233344444421 1111111 111
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 018946 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (348)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di 307 (348)
.+. +..+||+|++ ++.+++++|++|++|+||||+..|+
T Consensus 97 ~~~----------------------------~~~~KP~p~~--------------~~~~~~~~~id~~~~~~IGD~~~Di 134 (161)
T d2fpwa1 97 ADE----------------------------CDCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 134 (161)
T ss_dssp GGC----------------------------CSSSTTSSGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred ccc----------------------------ccccccccHH--------------HHHHHHhcCCChhcEEEECCCHHHH
Confidence 111 1135999999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 018946 308 AGAQRIGMPCVVMRSRC 324 (348)
Q Consensus 308 ~aA~~aG~~~i~v~~~~ 324 (348)
++|+++||++|++.+..
T Consensus 135 ~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 135 QLAENMGINGLRYDRET 151 (161)
T ss_dssp HHHHHHTSEEEECBTTT
T ss_pred HHHHHcCCeEEEECCCC
Confidence 99999999999997643
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=3.4e-17 Score=148.68 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=59.9
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
..||+|.+ |..+++++|++|++|+||||+. +||.+|+++||.+|+|.+|......+......+|+
T Consensus 183 ~~KP~p~~--------------~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ 248 (261)
T d1vjra_ 183 AGKPNPLV--------------VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDF 248 (261)
T ss_dssp CSTTSTHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSE
T ss_pred cCCCcHHH--------------HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCE
Confidence 36999999 9999999999999999999996 69999999999999999988877666554444555
Q ss_pred HHHhhccc
Q 018946 340 LCRILKSI 347 (348)
Q Consensus 340 l~~~l~~i 347 (348)
++++|.+|
T Consensus 249 ii~~l~eL 256 (261)
T d1vjra_ 249 VFKNLGEL 256 (261)
T ss_dssp EESSHHHH
T ss_pred EECCHHHH
Confidence 55555443
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=4.8e-17 Score=145.00 Aligned_cols=180 Identities=11% Similarity=0.158 Sum_probs=101.4
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHH---HHHhhHHHHHHHHHhcCCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML---VLFFNRKNALDEFLASKDA 160 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (348)
.++|+|||||||++.+. |..+....|... .+ .......+.......+.+. ...........+.+.....
T Consensus 10 ~~aV~FD~DGTLi~~e~------~~~l~~~~g~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREEG------IDELAKICGVED-AV-SEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPP 81 (217)
T ss_dssp CSEEEEETBTTTBSSCH------HHHHHHHTTCTT-TC-------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCC
T ss_pred CCEEEEcCccccCCccH------HHHHHHHcCChH-HH-HHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHHhhcc
Confidence 46999999999999764 355566667642 11 1111111111000011110 0001112233333444456
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
.++||+.++++.|+++|++++|+|++ ....++.+++.+|++.+. +++++ ... ..++..+|..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~---~~~~v~~i~~~lgi~~~~---v~an~-~~~-~~~G~~~g~~---------- 143 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGG---FRSIVEHVASKLNIPATN---VFANR-LKF-YFNGEYAGFD---------- 143 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCCGGG---EEEEC-EEE-CTTSCEEEEC----------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCC---chHHHHHHHHHhCCcccc---eeeee-eee-eehhccccce----------
Confidence 78999999999999999999999995 789999999999997532 11111 000 0011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.|.. .++.+... .+...+. .++++|++||||.+|+.+++.+|+.+++
T Consensus 144 ----------------------~~~p~~---~~~~K~~~---v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va~ 192 (217)
T d1nnla_ 144 ----------------------ETQPTA---ESGGKGKV---IKLLKEK--FHFKKIIMIGDGATDMEACPPADAFIGF 192 (217)
T ss_dssp ----------------------TTSGGG---STTHHHHH---HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEEE
T ss_pred ----------------------eeeeee---ccchHHHH---HHHHHhc--cCccccEEEEeCHhhHHHHHhCCceEEE
Confidence 222222 11222222 3444444 4578999999999999999999987544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.68 E-value=3e-17 Score=148.73 Aligned_cols=74 Identities=9% Similarity=0.094 Sum_probs=66.6
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCcEEEECCCCCCcccccccccchhH
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADM 339 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~ 339 (348)
.+||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|....+.+......+|+
T Consensus 178 ~~KP~~~~--------------~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~ 243 (253)
T d1yv9a1 178 IGKPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243 (253)
T ss_dssp CSTTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSE
T ss_pred ecccchhH--------------HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCE
Confidence 47999999 9999999999999999999996 59999999999999999988777766666556899
Q ss_pred HHHhhcccC
Q 018946 340 LCRILKSIT 348 (348)
Q Consensus 340 l~~~l~~i~ 348 (348)
++++|.|||
T Consensus 244 vi~sl~e~~ 252 (253)
T d1yv9a1 244 VVDSLDEWT 252 (253)
T ss_dssp EESSGGGCC
T ss_pred EECCHHHcC
Confidence 999999986
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.67 E-value=3.1e-16 Score=142.31 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=66.0
Q ss_pred cCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCcEEEECCCCCCcccccccccchhHH
Q 018946 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADML 340 (348)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~~~l~~~~~~~d~l 340 (348)
+||+|.+ |+.+++++|++|++|+||||+.. ||.+|+++||++|+|.+|....+++......+|++
T Consensus 179 gKP~p~~--------------~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~v 244 (253)
T d1wvia_ 179 GKPEAVI--------------MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFV 244 (253)
T ss_dssp STTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEE
T ss_pred ccCCccc--------------ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEE
Confidence 3999999 99999999999999999999965 99999999999999999988777777766678999
Q ss_pred HHhhcccC
Q 018946 341 CRILKSIT 348 (348)
Q Consensus 341 ~~~l~~i~ 348 (348)
+++|.||.
T Consensus 245 i~sl~e~~ 252 (253)
T d1wvia_ 245 LSSLAEWD 252 (253)
T ss_dssp ESCGGGCC
T ss_pred ECCHHHcC
Confidence 99998873
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=1.2e-16 Score=138.85 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=48.7
Q ss_pred hcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE-EEECCCCCCccc
Q 018946 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC-VVMRSRCITTLP 329 (348)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~ 329 (348)
++||+|++ +..++++++++|++++||||+.+|+++|++||+.+ ++|.++......
T Consensus 106 ~rKP~p~m--------------~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~ 161 (182)
T d2gmwa1 106 CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPE 161 (182)
T ss_dssp SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHH
T ss_pred ccCCcccc--------------ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcc
Confidence 56999999 99999999999999999999999999999999975 778777654443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.58 E-value=3.5e-15 Score=128.26 Aligned_cols=177 Identities=12% Similarity=0.147 Sum_probs=109.1
Q ss_pred CceEEEEecCCccccccccChHHHHHHHHHHcCCCCCCCCHHHHHHHHhcccCcHHHHHHHHh---hH-HHHHHHHHhcC
Q 018946 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF---NR-KNALDEFLASK 158 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ 158 (348)
+.|+|+||+||||+|++. |..++++.|+.. ......................... .. .........
T Consensus 3 kkKlv~FDlDGTL~d~es------~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNNET------IDEIAREAGVEE--EVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIK-- 72 (210)
T ss_dssp CCCEEEECCCCCCBSSCH------HHHHHHHTTCHH--HHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHH--
T ss_pred CCeEEEEeCCCCcCCchH------HHHHHHHcCCcH--HHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhh--
Confidence 468999999999999874 355666777641 1111111111111111111111100 00 122222222
Q ss_pred CCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhH
Q 018946 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (348)
Q Consensus 159 ~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~ 238 (348)
..++.+|+.++++.++.+|..++++|+. ....+....++.+...++...+...+.... ... ......+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~---- 140 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGG---FDIAVNKIKEKLGLDYAFANRLIVKDGKLT----GDV-EGEVLKE---- 140 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHHTCSEEEEEEEEEETTEEE----EEE-ECSSCST----
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeeccc---ccccccchhhccchhhhhhhhhcccccccc----ccc-ccccccc----
Confidence 3578999999999999999999999994 678888899999888776554322211100 000 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 018946 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (348)
Q Consensus 239 ~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 318 (348)
++.+.. +...++.++++++++++|||+.+|+.+++.+|+.++
T Consensus 141 ------------------------~~~~~~--------------~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va 182 (210)
T d1j97a_ 141 ------------------------NAKGEI--------------LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 182 (210)
T ss_dssp ------------------------THHHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEE
T ss_pred ------------------------ccccch--------------hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEE
Confidence 111122 778889999999999999999999999999999865
Q ss_pred E
Q 018946 319 V 319 (348)
Q Consensus 319 ~ 319 (348)
+
T Consensus 183 ~ 183 (210)
T d1j97a_ 183 F 183 (210)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.48 E-value=1.6e-14 Score=139.36 Aligned_cols=119 Identities=15% Similarity=0.044 Sum_probs=91.3
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe-eecchhhhhhhcccccccccccCCchhHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~-i~~~~e~~~~~~~~~v~g~~v~~~~~~~~ 239 (348)
+++||+.++|+.|+++|++++++||. +...++.+++++|+.++|+.. +++++++.... .......
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~---~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~---~~~~~~~-------- 280 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGR---PYTETVVPFENLGLLPYFEADFIATASDVLEAE---NMYPQAR-------- 280 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHH---HHSTTSC--------
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCC---CHHHHHHHHHHcCCcccCCcceEEecchhhhhh---hhccccc--------
Confidence 35669999999999999999999995 789999999999999998743 34444432210 0001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHH--------------cCCCCCcEEEEecCHh
Q 018946 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--------------AEKPVRNCFLIAGSQS 305 (348)
Q Consensus 240 ~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~--------------lgv~p~~~i~VGDs~~ 305 (348)
...||+|++ |..++.. ++..+++|+||||+.+
T Consensus 281 --------------------~~~KP~p~~--------------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~ 326 (380)
T d1qyia_ 281 --------------------PLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLA 326 (380)
T ss_dssp --------------------CCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHH
T ss_pred --------------------cccCCChHH--------------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHH
Confidence 123999999 7766644 4677899999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCc
Q 018946 306 GVAGAQRIGMPCVVMRSRCITT 327 (348)
Q Consensus 306 Di~aA~~aG~~~i~v~~~~~~~ 327 (348)
|+.+|+++|+++|+|.+|....
T Consensus 327 D~~aak~Ag~~~Igv~~G~~g~ 348 (380)
T d1qyia_ 327 DLLSAQKIGATFIGTLTGLKGK 348 (380)
T ss_dssp HHHHHHHHTCEEEEESCBTTBG
T ss_pred HHHHHHHCCCCEEEEecCCCCc
Confidence 9999999999999999876554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.46 E-value=3.9e-14 Score=117.48 Aligned_cols=41 Identities=20% Similarity=0.068 Sum_probs=32.5
Q ss_pred HHHHHHHcCCCCCc-EEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 283 LRAGAEYAEKPVRN-CFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 283 ~~~a~~~lgv~p~~-~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
....+.++..++.+ +++|||+..|+++|+++|++|+.|.+|
T Consensus 106 k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 106 KEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 44555566555555 567899999999999999999999876
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.26 E-value=1.5e-12 Score=111.23 Aligned_cols=166 Identities=17% Similarity=0.142 Sum_probs=101.6
Q ss_pred ceEEEEecCCccccccccChHHHHHHHHHHcCCCCC---CCCHHHHHHHHhcccCcHHHHHHHHhhHHHHHHHHHhcCCC
Q 018946 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA---NWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDA 160 (348)
Q Consensus 84 ~kaviFDvDGTL~d~~~~~~~~a~~~~~~~~gl~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (348)
+|.|+|||||||++. .|.+++++.|+... ....-.|.+.+.. ....+.........+... ....
T Consensus 2 mkli~fDlDGTLl~e-------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~----~v~ll~~~~~~~~~~~~~--~~~~ 68 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE-------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ----RLRILDEHGLKLGDIQEV--IATL 68 (206)
T ss_dssp CEEEEEESBTTTBCC-------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH----HHHHHHHTTCCHHHHHHH--HTTC
T ss_pred cEEEEEcCccchHHH-------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH----HHHHHHhCCCceehhhhh--hhhc
Confidence 589999999999973 35667777888531 0000011111110 000000000001122222 1346
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHH
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~ 240 (348)
...++...++..++ .+++++++|.+ +..........++...++........... .....
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~---------- 127 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDT---FYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------VVGYQ---------- 127 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEE---EHHHHHHHHHHTTCCCEEEEEEEECTTSC-------EEEEE----------
T ss_pred cccchHHHHHHHhh-cCceEEEeccC---chHHHHHHHHHhCCchhhcceeeeecccc-------ccccc----------
Confidence 78899999988775 67999999985 77888888888888766544322111110 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 241 ~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
.+.+.. ....++.++++++++++|||+.||+.|.+.||..+++
T Consensus 128 ----------------------~~~~~~--------------~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm 170 (206)
T d1rkua_ 128 ----------------------LRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp ----------------------CCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred ----------------------ccchhh--------------HHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE
Confidence 222222 5667788999999999999999999999999999777
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.83 E-value=9.7e-10 Score=101.98 Aligned_cols=54 Identities=26% Similarity=0.455 Sum_probs=46.5
Q ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcc
Q 018946 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (348)
Q Consensus 149 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~ 205 (348)
..+.+.+....+.++||+.++++.|+++|++++|+|+| ....++.+++++|+..
T Consensus 123 ~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG---~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 123 AKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAG---IGDVLEEVIRQAGVYH 176 (291)
T ss_dssp GGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEE---EHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCC---hHHHHHHHHHHcCCCc
Confidence 34555665556889999999999999999999999997 7899999999999863
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=9.4e-09 Score=90.61 Aligned_cols=100 Identities=8% Similarity=0.088 Sum_probs=66.4
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHH-HHcCCcccch-heeecchhhhhhhcccccccccccCCchh
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV-EKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il-~~lgl~~~f~-~~i~~~~e~~~~~~~~~v~g~~v~~~~~~ 237 (348)
..+.||+.+|++.++++|+++..+||........+..-+ +.+|+..... .+++.. .
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~--------------~-------- 142 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAG--------------D-------- 142 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECC--------------C--------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeC--------------C--------
Confidence 346889999999999999999999997543344444444 5578742211 111111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 018946 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 238 ~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
+|+-.- -+..++++++ .+++||..+|+.+|.++|+++
T Consensus 143 -------------------------~~~K~~--------------rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~ 179 (209)
T d2b82a1 143 -------------------------KPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARG 179 (209)
T ss_dssp -------------------------CTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred -------------------------CCCchH--------------HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCc
Confidence 111111 2233366776 699999999999999999999
Q ss_pred EEECCCC
Q 018946 318 VVMRSRC 324 (348)
Q Consensus 318 i~v~~~~ 324 (348)
|-+....
T Consensus 180 iRi~r~~ 186 (209)
T d2b82a1 180 IRILRAS 186 (209)
T ss_dssp EECCCCT
T ss_pred eEeeccC
Confidence 9885543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=5.2e-08 Score=86.65 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
+++.+++.++++++++++|||+.||+.+.+.+|..+++
T Consensus 201 al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am 238 (271)
T d1rkqa_ 201 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 238 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe
Confidence 37889999999999999999999999999999976543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.62 E-value=8.2e-08 Score=82.50 Aligned_cols=39 Identities=8% Similarity=0.221 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.+
T Consensus 157 l~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~n 195 (230)
T d1wr8a_ 157 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQ 195 (230)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred hcccccccccchhheeeeecCccHHHHHHHCCeE-EEECC
Confidence 8889999999999999999999999999999986 44443
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.54 E-value=1.1e-07 Score=82.79 Aligned_cols=37 Identities=11% Similarity=-0.056 Sum_probs=33.7
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 319 (348)
++.+++++|++++++++|||+.||+.++..+|..+++
T Consensus 156 i~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav 192 (225)
T d1l6ra_ 156 VNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP 192 (225)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred HHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE
Confidence 7888999999999999999999999999999976543
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.49 E-value=3.1e-07 Score=81.96 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
+++..++++|++++++++|||+.||+.+...+|..+ .+.+
T Consensus 217 ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~sv-am~n 256 (285)
T d1nrwa_ 217 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGN 256 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTT
T ss_pred HHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEE-EeCC
Confidence 378899999999999999999999999999999775 4444
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=3.3e-06 Score=72.00 Aligned_cols=46 Identities=7% Similarity=0.031 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 276 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 276 ~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
+-..+..+....+++|++++++++|||+.||+.+.+.+|.. |+|.+
T Consensus 185 K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~-vaV~n 230 (232)
T d1xvia_ 185 KDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKG 230 (232)
T ss_dssp HHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCC
T ss_pred HHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeE-EEEeC
Confidence 33444334455567899999999999999999999999974 55543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=4.8e-07 Score=77.61 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=29.7
Q ss_pred EEEecCHhhHHHHHHcCCcEEEECCCCCCcccc
Q 018946 298 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV 330 (348)
Q Consensus 298 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l 330 (348)
++|+|++..+.++.++|+.+|+...+++.+...
T Consensus 140 ~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~ 172 (195)
T d1q92a_ 140 LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQL 172 (195)
T ss_dssp EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCC
T ss_pred EEecCcHHHHHHHhcCCCeEEEECCCcccCCCC
Confidence 899999999999999999999999999887543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=2.8e-07 Score=80.24 Aligned_cols=98 Identities=19% Similarity=0.228 Sum_probs=69.6
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCC------CCCc---hHHHHHHHHcCCcccchheeecchhhhhhhccccccccccc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYG------KSGD---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~------~~~~---~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~ 232 (348)
+.|++.+.|+.|.++|+.++|+||-. .+.+ .....+++.++.... +.++.. .
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~---i~~~~~-------------~--- 111 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQ---VLVATH-------------A--- 111 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCE---EEEECS-------------S---
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCcc---EEEecC-------------c---
Confidence 47999999999999999999999931 0011 223444455544311 111100 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcC----CCCCcEEEEecC-----
Q 018946 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGS----- 303 (348)
Q Consensus 233 ~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lg----v~p~~~i~VGDs----- 303 (348)
..+|||.|.| +..+++.+. ++.++++||||.
T Consensus 112 --------------------------~~~RKP~~GM--------------~~~~~~~~n~~~~id~~~S~~IGD~~gr~~ 151 (195)
T d1yj5a1 112 --------------------------GLNRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 151 (195)
T ss_dssp --------------------------SSSSTTSTHH--------------HHHHHHTSSSSCCCCGGGCEEECSCCCBCT
T ss_pred --------------------------cccCCCccHH--------------HHHHHHHhcccccCCcCceEEEeCccCccc
Confidence 0257999999 999999874 888999999994
Q ss_pred ------------HhhHHHHHHcCCcEE
Q 018946 304 ------------QSGVAGAQRIGMPCV 318 (348)
Q Consensus 304 ------------~~Di~aA~~aG~~~i 318 (348)
-.|++.|.++|++..
T Consensus 152 ~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 152 NWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhHHHHHHHCCCccc
Confidence 389999999999965
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.07 E-value=5.3e-06 Score=67.74 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=39.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccch
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~ 208 (348)
+++|++.+.++.|++.|+++.++|+ .....+..+.+.+|++.+|.
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTG---D~~~~a~~ia~~lgI~~v~~ 65 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIA 65 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcC---cchhhhhHHHhhhhhhhhcc
Confidence 5899999999999999999999998 46788999999999976553
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.06 E-value=2e-06 Score=76.00 Aligned_cols=39 Identities=3% Similarity=0.031 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++.++++++++++|||+.||+.+...+|..++ +.+
T Consensus 212 l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va-~~n 250 (283)
T d2b30a1 212 INYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VAN 250 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTT
T ss_pred HHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE-eCC
Confidence 888999999999999999999999999999998654 444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.03 E-value=7.7e-06 Score=70.39 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=32.7
Q ss_pred HHHHHHHcC-CCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAE-KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lg-v~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
+...+++++ +.++++++|||+.||+.+...+|..+++ .+
T Consensus 184 l~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~-~N 223 (243)
T d1wzca1 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GS 223 (243)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SS
T ss_pred HHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe-CC
Confidence 667778884 8889999999999999999999976554 44
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.87 E-value=1.8e-05 Score=68.80 Aligned_cols=38 Identities=5% Similarity=-0.026 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEEC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 321 (348)
.+.+++++|++++++++|||+.||+.+.+.+|..+ .|.
T Consensus 167 ~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~v-av~ 204 (244)
T d1s2oa1 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV-IVR 204 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEE-ECT
T ss_pred HHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEE-EeC
Confidence 78999999999999999999999999999999764 443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=97.84 E-value=7.7e-06 Score=72.48 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 322 (348)
++..++++|++++++++|||+.||+.+...+|.. |.+.+
T Consensus 195 i~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~n 233 (267)
T d1nf2a_ 195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMEN 233 (267)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTT
T ss_pred HHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCC
Confidence 7889999999999999999999999999999986 44444
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.75 E-value=2.3e-05 Score=66.63 Aligned_cols=83 Identities=16% Similarity=0.083 Sum_probs=64.6
Q ss_pred HHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchheeecchhhhhhhcccccccccccCCchhHHHHHHHHHHH
Q 018946 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (348)
Q Consensus 169 lL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~i~~~~e~~~~~~~~~v~g~~v~~~~~~~~~~~~~k~~~ 248 (348)
.+..|+..|+.++++|.. ....+....+.+++...+....
T Consensus 40 gi~~l~~~gi~~~iis~~---~~~~v~~~~~~l~~~~~~~~~~------------------------------------- 79 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGKL------------------------------------- 79 (177)
T ss_dssp HHHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESCS-------------------------------------
T ss_pred HHHHHhhhcEEEEEecCC---chhHHHHHHhhhcccccccccc-------------------------------------
Confidence 478888999999999985 4577888888888765433210
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 249 ~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
+.. .+++..++++++++++|+||||..+|+.+...+|+..+.-
T Consensus 80 ---------------~K~--------------~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~ 122 (177)
T d1k1ea_ 80 ---------------EKE--------------TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 122 (177)
T ss_dssp ---------------CHH--------------HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred ---------------cHH--------------HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC
Confidence 000 1177888999999999999999999999999999875543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.70 E-value=6.2e-05 Score=63.34 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=37.6
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
|++|++.+.|+.|++.|+++.++|+ .....+..+.+++|+.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTG---D~~~tA~~ia~~~Gi~ 60 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIF 60 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTSS
T ss_pred CCchhHHHHHHHHHHCcCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 4678899999999985
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.35 E-value=0.00014 Score=70.21 Aligned_cols=123 Identities=8% Similarity=0.029 Sum_probs=80.8
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHH-c--------CCcccchheeecchhhhhhhccc------cc
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQ------FV 226 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~-l--------gl~~~f~~~i~~~~e~~~~~~~~------~v 226 (348)
.-|.+..+|.+||++|.++.++||+ .-..+..+++. + .+.++||++|+.+.. .++|.. +.
T Consensus 186 k~~~l~~~L~~lr~~GKklFLiTNS---~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~K--P~FF~~~~~~~~v~ 260 (458)
T d2bdea1 186 REKEVVEGLKHFIRYGKKIFILTNS---EYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANK--PRFFYDNLRFLSVN 260 (458)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSS---CHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCH--HHHHHSCCCEEEEC
T ss_pred CChhHHHHHHHHHHcCCeEEEEecC---cHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCC--CCccCCCCcceEEe
Confidence 3688999999999999999999994 66777777764 4 567899998876532 222321 11
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCchhhHHHHHHHHHHHHcCCCCCcEEEEecCH-h
Q 018946 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 305 (348)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~~~~~~~i~~~~~~~~KP~p~i~~~~~~~~~~~~~~~~~a~~~lgv~p~~~i~VGDs~-~ 305 (348)
+..+..... .+..| +.+|.... +....+.+|....++++|||+. .
T Consensus 261 ~~~g~l~~~-----------------------~~~~~--~~vY~gGn---------~~~l~~llg~~g~~VLY~GDhi~~ 306 (458)
T d2bdea1 261 PENGTMTNV-----------------------HGPIV--PGVYQGGN---------AKKFTEDLGVGGDEILYIGDHIYG 306 (458)
T ss_dssp TTTCCEEEC-----------------------CSCCC--SEEEEECC---------HHHHHHHTTCCGGGEEEEESSCCS
T ss_pred CCCCccccC-----------------------Ccccc--CCccccCC---------HHHHHHHhCCCCCcEEEECCccch
Confidence 111110000 00001 22332111 5666788899999999999996 6
Q ss_pred hHHHHH-HcCCcEEEECCC
Q 018946 306 GVAGAQ-RIGMPCVVMRSR 323 (348)
Q Consensus 306 Di~aA~-~aG~~~i~v~~~ 323 (348)
||...+ ..||.|++|-..
T Consensus 307 Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 307 DILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp CHHHHHHHHCSEEEEECTT
T ss_pred hhhhhhhhcCCceEEehHH
Confidence 977665 679999998753
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.0011 Score=57.63 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 018946 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (348)
Q Consensus 282 ~~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 320 (348)
+++.+++++|++++++++|||+.||+.|...+|..+++-
T Consensus 194 al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~ 232 (269)
T d1rlma_ 194 GISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG 232 (269)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT
T ss_pred HHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC
Confidence 378899999999999999999999999999999987643
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.07 E-value=0.0016 Score=56.54 Aligned_cols=40 Identities=5% Similarity=0.022 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 283 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
++.+++++|++++++++|||+.||+.|...+|.. |.|.++
T Consensus 191 l~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na 230 (260)
T d2rbka1 191 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQA 230 (260)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred HHHHHHhccccHhheeEecCCcccHHHHHhCCeE-EEeCCC
Confidence 7899999999999999999999999999999996 555543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=95.92 E-value=0.0037 Score=49.59 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCC------------CchHHHHHHHHcCCc
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSE 204 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~------------~~~~~~~il~~lgl~ 204 (348)
.|.+++.++|..|+++|+++.|.|+.... ....+...|+..|+.
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~ 79 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999986310 124466777777873
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=95.68 E-value=0.0023 Score=55.50 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=24.6
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 166 v~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
+.+.|++|+++|++++++|+. ....+..+++.+++.
T Consensus 25 ~~~~l~~l~~~gi~~~i~TGR---~~~~~~~~~~~l~~~ 60 (269)
T d1rlma_ 25 FMAQYQELKKRGIKFVVASGN---QYYQLISFFPELKDE 60 (269)
T ss_dssp HHHHHHHHHHHTCEEEEECSS---CHHHHGGGCTTTTTT
T ss_pred HHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHhCcc
Confidence 445678888889999999984 334455555556554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.98 E-value=0.0057 Score=51.11 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=27.1
Q ss_pred cCCCCCcEEEEec----CHhhHHHHHHcCCcEEEECC
Q 018946 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 290 lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~ 322 (348)
++.+++++++||| +.||+.+.+.+|...+.|.+
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 4678999999999 78999999999977777764
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.17 E-value=0.6 Score=40.78 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCc
Q 018946 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (348)
Q Consensus 148 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~ 204 (348)
...+.++-.. .+.+.||+.++|+.+.+. .+.+|+|. |...+++++.+++|+.
T Consensus 69 ~edL~~fSE~-~~~lvpgA~~~lk~l~~~-m~~yIvST---SY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 69 NRDVERIAEL-SAKFVPDAEKAMATLQER-WTPVVIST---SYTQYLRRTASMIGVR 120 (308)
T ss_dssp HHHHHHHHHH-HCCBCTTHHHHHHHHHTT-CEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhh-ceeecCCHHHHHHHHHhh-CCcEEEec---cHHHHHHHHHhhcCCC
Confidence 4455555443 478999999999999887 88888887 5889999999999984
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.26 E-value=0.05 Score=45.17 Aligned_cols=47 Identities=19% Similarity=0.221 Sum_probs=40.0
Q ss_pred CCCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCCcccchhe
Q 018946 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (348)
Q Consensus 160 ~~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl~~~f~~~ 210 (348)
+..+||+.+||+.+.+. +.++|.|.+ ...+++.+++.++....+...
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~---~~~YA~~il~~ldp~~~~~~~ 100 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTAS---LAKYADPVADLLDKWGAFRAR 100 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCSSCCEEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCC---cHHHHHHHHHHhccCCceeEE
Confidence 45799999999999886 999999997 579999999999887655443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.77 E-value=0.035 Score=45.77 Aligned_cols=32 Identities=3% Similarity=-0.107 Sum_probs=27.6
Q ss_pred CCCCCcEEEEecC----HhhHHHHHHcCCcEEEECC
Q 018946 291 EKPVRNCFLIAGS----QSGVAGAQRIGMPCVVMRS 322 (348)
Q Consensus 291 gv~p~~~i~VGDs----~~Di~aA~~aG~~~i~v~~ 322 (348)
+.+++++++|||+ .||+++...+|...+.|.+
T Consensus 195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 4588999999996 5999999999987777764
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=90.63 E-value=0.05 Score=46.58 Aligned_cols=15 Identities=33% Similarity=0.580 Sum_probs=13.1
Q ss_pred eEEEEecCCcccccc
Q 018946 85 LAVLLEVDGVLVDAY 99 (348)
Q Consensus 85 kaviFDvDGTL~d~~ 99 (348)
|+|+||+||||++.+
T Consensus 2 k~if~DlDGTL~~~~ 16 (260)
T d2rbka1 2 KALFFDIDGTLVSFE 16 (260)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred eEEEEECCCCCcCCC
Confidence 689999999999753
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.73 E-value=0.069 Score=44.03 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=15.2
Q ss_pred CceEEEEecCCccccccc
Q 018946 83 RDLAVLLEVDGVLVDAYR 100 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~~ 100 (348)
.+|.++||+||||++...
T Consensus 2 ~~kl~~fDlDGTLl~~~~ 19 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQ 19 (243)
T ss_dssp CSEEEEEESBTTTBCTTS
T ss_pred CCEEEEEcCcCCeeCCCC
Confidence 568999999999998653
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.36 E-value=0.097 Score=42.82 Aligned_cols=24 Identities=8% Similarity=0.014 Sum_probs=21.0
Q ss_pred CCcEEEEecCHhhHHHHHHcCCcE
Q 018946 294 VRNCFLIAGSQSGVAGAQRIGMPC 317 (348)
Q Consensus 294 p~~~i~VGDs~~Di~aA~~aG~~~ 317 (348)
.+++++|||+.||+.|...+|..+
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~~ 193 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDAL 193 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTSE
T ss_pred cccceeecCCCChHHHHhccCCeE
Confidence 368999999999999999998753
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=86.91 E-value=0.51 Score=38.16 Aligned_cols=13 Identities=38% Similarity=0.685 Sum_probs=11.5
Q ss_pred EEEEecCCccccc
Q 018946 86 AVLLEVDGVLVDA 98 (348)
Q Consensus 86 aviFDvDGTL~d~ 98 (348)
.|+||+||||++.
T Consensus 2 Li~~DlDGTL~~~ 14 (229)
T d1u02a_ 2 LIFLDYDGTLVPI 14 (229)
T ss_dssp EEEEECBTTTBCC
T ss_pred EEEEEecCCCCCC
Confidence 6899999999974
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=84.79 E-value=1.2 Score=36.75 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=26.3
Q ss_pred HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCcEEEECCC
Q 018946 285 AGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (348)
Q Consensus 285 ~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 323 (348)
..++.-|++ ++|||+.. ...|++.||+.|++.++
T Consensus 136 ~~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 136 NELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp HHHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSCH
T ss_pred HHHHHCCCC----EEECChHH-HHHHHHcCCCEEEEeCH
Confidence 345667776 78999854 47789999999998753
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.40 E-value=0.27 Score=40.03 Aligned_cols=15 Identities=40% Similarity=0.614 Sum_probs=12.1
Q ss_pred EEEEecCCccccccc
Q 018946 86 AVLLEVDGVLVDAYR 100 (348)
Q Consensus 86 aviFDvDGTL~d~~~ 100 (348)
.++||+||||++...
T Consensus 3 i~lFDlDGTLl~~~~ 17 (244)
T d2fuea1 3 LCLFDVDGTLTPARQ 17 (244)
T ss_dssp EEEEESBTTTBSTTS
T ss_pred EEEEccccCccCCCC
Confidence 456899999998654
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=82.69 E-value=0.43 Score=36.87 Aligned_cols=43 Identities=14% Similarity=-0.101 Sum_probs=30.8
Q ss_pred CCCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHHHHcCC
Q 018946 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (348)
Q Consensus 161 ~l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il~~lgl 203 (348)
.+.|++.++|+.|+++|+.+.+.|+............+++.|+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence 4789999999999999999999998632111233444555555
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=82.23 E-value=0.23 Score=40.80 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=14.5
Q ss_pred CceEEEEecCCcccccc
Q 018946 83 RDLAVLLEVDGVLVDAY 99 (348)
Q Consensus 83 ~~kaviFDvDGTL~d~~ 99 (348)
.+|++||||||||+|..
T Consensus 4 ~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GCCEEEEECTTTTSCSE
T ss_pred cCeEEEEccCCcccCCe
Confidence 46899999999999853
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=81.30 E-value=0.91 Score=38.28 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCCcHHHHHHHHHHCCCcEEEEeCCCCCCchHHHHHH-HHcCCcccchhe
Q 018946 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV-EKLGSERISKIK 210 (348)
Q Consensus 162 l~pGv~elL~~Lk~~Gi~vaIvTn~~~~~~~~~~~il-~~lgl~~~f~~~ 210 (348)
+.|++.++++.|+++|++++++||.++.....+...+ ..+|+....+.+
T Consensus 19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i 68 (253)
T d1wvia_ 19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETI 68 (253)
T ss_dssp ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGE
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccccc
Confidence 3578889999999999999999986543344444444 345665444444
|