Citrus Sinensis ID: 018958

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MVLIFERSGSFKINTTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
cEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHcccEEEEEEcccccccccccccccccccccccEEEEEEEEccccccccEEEEEcccccccccccEEEEEccccccccccccccccc
cEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcHHHccccEcccHHHHHHHHHHHccEEEcccccccccccccccccccccEcccEEEEcccccHHHHHHHHHHccEEEEEccccHHHHcccccEEcccccccccEEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccHHHcccccEEEEc
mvlifersgsfkinttPMFIIITLLVSCASqvvssrstheQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEgnrtyklgtnqfsdltNDEFRALYtgykmpspshrsttsstfkyqnlsmtdvptsldwrdkgavtpiknqkecgccWAFAAVAAVEGITKIrsgnliqlseqqlldcstngnngclggsREKAFAYIIQNqgiatedeypyqavpgtcsaaqkpaaakisnyeevpsgdEQALLKAVSMQPVSIAIAAYSTEFQSYKegifngvcgtqlDHAVTIVgfgttedgANYWLIKnswgntwgdagyMKIVrdeglcgigtrssypla
mvlifersgsfkintTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKAnkegnrtyklgtnqfsdlTNDEFRALYTGykmpspshrsttsstfkyqNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGlcgigtrssypla
MVLIFERSGSFKINTTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRsttsstFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
**LIFERSGSFKINTTPMFIIITLLVSCASQVVS*******SVVEIHEKWMAQHG*********EMRLKIFKENLEYIEKANK*GNRTYKLGTNQFSDLTNDEFRALYTGY**********************TDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTC************************LLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIG********
********GSFKINTTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTG********************LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
MVLIFERSGSFKINTTPMFIIITLLVSCAS************VVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKM***********TFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCS*********ISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
MVLIFERSGSFKINTTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYK***************YQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVLIFERSGSFKINTTPMFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
O65493355 Xylem cysteine proteinase no no 0.876 0.859 0.471 3e-84
Q9STL4361 KDEL-tailed cysteine endo no no 0.928 0.894 0.447 4e-83
P80884345 Ananain OS=Ananas comosus N/A no 0.928 0.936 0.444 5e-83
P43297 462 Cysteine proteinase RD21a no no 0.893 0.673 0.464 6e-83
O23791351 Fruit bromelain OS=Ananas N/A no 0.928 0.920 0.438 3e-82
P25803362 Vignain OS=Phaseolus vulg N/A no 0.948 0.911 0.450 4e-82
P25250373 Cysteine proteinase EP-B N/A no 0.879 0.820 0.441 3e-81
P25249371 Cysteine proteinase EP-B N/A no 0.882 0.827 0.436 4e-81
O65039360 Vignain OS=Ricinus commun N/A no 0.850 0.822 0.480 4e-81
Q9FGR9361 KDEL-tailed cysteine endo no no 0.928 0.894 0.437 3e-80
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  312 bits (799), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 215/314 (68%), Gaps = 9/314 (2%)

Query: 38  THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFS 97
           T+   ++E+ E WM++H ++YK   EK  R ++F+ENL +I++ N E N +Y LG N+F+
Sbjct: 42  TNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEIN-SYWLGLNEFA 100

Query: 98  DLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKEC 157
           DLT++EF+  Y G   P  S +   S+ F+Y+++  TD+P S+DWR KGAV P+K+Q +C
Sbjct: 101 DLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI--TDLPKSVDWRKKGAVAPVKDQGQC 158

Query: 158 GCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGI 217
           G CWAF+ VAAVEGI +I +GNL  LSEQ+L+DC T  N+GC GG  + AF YII   G+
Sbjct: 159 GSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGL 218

Query: 218 ATEDEYPYQAVPGTCSAAQKPAA-AKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTE 276
             ED+YPY    G C   ++      IS YE+VP  D+++L+KA++ QPVS+AI A   +
Sbjct: 219 HKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRD 278

Query: 277 FQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD--- 333
           FQ YK G+FNG CGT LDH V  VG+G+++ G++Y ++KNSWG  WG+ G++++ R+   
Sbjct: 279 FQFYKGGVFNGKCGTDLDHGVAAVGYGSSK-GSDYVIVKNSWGPRWGEKGFIRMKRNTGK 337

Query: 334 -EGLCGIGTRSSYP 346
            EGLCGI   +SYP
Sbjct: 338 PEGLCGINKMASYP 351
Probable thiol protease.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P80884|ANAN_ANACO Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|O23791|BROM1_ANACO Fruit bromelain OS=Ananas comosus PE=1 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
255563110344 cysteine protease, putative [Ricinus com 0.945 0.956 0.547 1e-103
224076970340 predicted protein [Populus trichocarpa] 0.951 0.973 0.529 1e-102
255564908342 cysteine protease, putative [Ricinus com 0.939 0.956 0.545 1e-100
255564910341 cysteine protease, putative [Ricinus com 0.936 0.956 0.551 1e-100
124484401339 cysteine proteinase precursor [Ipomoea n 0.948 0.973 0.516 1e-99
225443827340 PREDICTED: vignain-like [Vitis vinifera] 0.936 0.958 0.544 2e-99
24285904341 cysteine proteinase precursor [Ipomoea b 0.896 0.914 0.538 2e-99
409190991342 cysteine proteinase [Lotus japonicus] 0.928 0.944 0.532 2e-99
13491750339 cysteine protease [Ipomoea batatas] 0.896 0.920 0.541 2e-99
224076968305 predicted protein [Populus trichocarpa] 0.856 0.977 0.556 5e-99
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/338 (54%), Positives = 242/338 (71%), Gaps = 9/338 (2%)

Query: 18  MFIIITLLVSCASQVVSSRSTHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEY 77
           + ++  LLV+  +    SRS HE S+   H+ WM Q+GR YK  +EKE R KIFKEN+E+
Sbjct: 9   LVLMAMLLVTLWASQSWSRSLHEASMELRHKTWMTQYGRVYKGNVEKEKRFKIFKENVEF 68

Query: 78  IEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRST-TSSTFKYQNLSMTDV 136
           IE  N  GN+ YKLG N F+DLTN+EFRA + GY M   SH+S+  + +F+Y+N+  T V
Sbjct: 69  IESFNNNGNKPYKLGINAFTDLTNEEFRASHNGYTMSMSSHQSSYRTKSFRYENV--TAV 126

Query: 137 PTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNG- 195
           P SLDWR KGAVT IK+Q +CGCCWAF+AVAA+EGITK+ +G LI LSEQ+L+DC T+G 
Sbjct: 127 PPSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGTLISLSEQELVDCDTSGM 186

Query: 196 NNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKP-AAAKISNYEEVPSGDE 254
           + GC GG  + AF +II+N G+ TE  YPY+ V G+C+  +    AAKI+ YE VP+ DE
Sbjct: 187 DQGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDGSCNTRKAANHAAKITGYENVPAYDE 246

Query: 255 QALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLI 314
           +AL KAV+ QPVS+AI A  + FQ Y  GIF G CGT+LDH VT+VG+GT++DG  YWL+
Sbjct: 247 EALRKAVANQPVSVAIDAGESAFQHYSSGIFTGDCGTELDHGVTVVGYGTSDDGTKYWLV 306

Query: 315 KNSWGNTWGDAGYMKIVRD----EGLCGIGTRSSYPLA 348
           KNSWG +WG+ GY+++ RD    EGLCGI    SYP A
Sbjct: 307 KNSWGTSWGEDGYIRMERDIDAKEGLCGIAMEPSYPTA 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa] gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil] Back     alignment and taxonomy information
>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|24285904|gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas] gi|56961686|gb|AAK15148.2| cysteine proteinase-like protein [Ipomoea batatas] Back     alignment and taxonomy information
>gi|409190991|gb|AFV30165.1| cysteine proteinase [Lotus japonicus] Back     alignment and taxonomy information
>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas] Back     alignment and taxonomy information
>gi|224076968|ref|XP_002305072.1| predicted protein [Populus trichocarpa] gi|222848036|gb|EEE85583.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.948 0.967 0.526 9e-93
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.945 0.945 0.511 1.1e-89
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.942 0.950 0.495 5.9e-89
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.942 0.947 0.485 9.9e-87
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.954 0.935 0.495 6.9e-86
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.879 0.884 0.509 3.4e-84
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.876 0.859 0.468 4.2e-79
TAIR|locus:2825832 462 RD21A "responsive to dehydrati 0.870 0.655 0.466 4.8e-78
TAIR|locus:2090614 452 AT3G19390 [Arabidopsis thalian 0.956 0.736 0.434 5.5e-77
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.887 0.667 0.455 5.5e-77
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
 Identities = 181/344 (52%), Positives = 234/344 (68%)

Query:    15 TTPMFIIITLLVSCASQVVSSRS-THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKE 73
             T+ +F ++ +L+S  +  V+SR    E S VE HE+WM++  R Y D+ EK  R +IF  
Sbjct:     2 TSIVFFLLAILLSSRTSGVTSRGGLFEASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTN 61

Query:    74 NLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRXXXXXX-----FKY 128
             NL+++E  N   N+TY L  N+FSDLT++EF+A YTG  +P    R           F+Y
Sbjct:    62 NLKFVESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRISTTDSHETVSFRY 121

Query:   129 QNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQL 188
             +N+  T    S+DW  +GAVT +K+Q++CGCCWAF+AVAAVEG+TKI +G L+ LSEQQL
Sbjct:   122 ENVGETG--ESMDWIQEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIANGELVSLSEQQL 179

Query:   189 LDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEE 248
             LDCST  NNGC GG   KAF YI +NQGI TED YPYQ    TC +    AAA IS YE 
Sbjct:   180 LDCSTE-NNGCGGGIMWKAFDYIKENQGITTEDNYPYQGAQQTCESNHL-AAATISGYET 237

Query:   249 VPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDG 308
             VP  DE+ALLKAVS QPVS+AI     EF  Y  GIFNG CGTQL HAVTIVG+G +E+G
Sbjct:   238 VPQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTQLTHAVTIVGYGVSEEG 297

Query:   309 ANYWLIKNSWGNTWGDAGYMKIVRD----EGLCGIGTRSSYPLA 348
               YWL+KNSWG +WG+ GYM+I+RD    +G+CG+ + + YP+A
Sbjct:   298 IKYWLLKNSWGESWGENGYMRIMRDVDSPQGMCGLASLAYYPVA 341
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.44620.86780.8140yesno
P25774CATS_HUMAN3, ., 4, ., 2, 2, ., 2, 70.37860.91950.9667yesno
P25326CATS_BOVIN3, ., 4, ., 2, 2, ., 2, 70.39940.91950.9667yesno
Q8HY81CATS_CANFA3, ., 4, ., 2, 2, ., 2, 70.39940.91950.9667yesno
Q23894CYSP3_DICDI3, ., 4, ., 2, 2, ., -0.38370.95110.9821yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-110
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-105
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 5e-79
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 7e-75
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 6e-72
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 4e-53
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 4e-42
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 3e-39
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 8e-35
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 2e-34
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 3e-24
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 4e-22
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 6e-16
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 1e-15
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-14
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 7e-09
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  318 bits (817), Expect = e-110
 Identities = 114/215 (53%), Positives = 147/215 (68%), Gaps = 5/215 (2%)

Query: 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNG 195
           +P S DWR+KGAVTP+K+Q +CG CWAF+AV A+EG   I++G L+ LSEQQL+DC T G
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDT-G 59

Query: 196 NNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPA-AAKISNYEEVPSGDE 254
           NNGC GG  + AF YI +N GI TE +YPY A  GTC   +  +  AKI  Y +VP  DE
Sbjct: 60  NNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDE 119

Query: 255 QALLKAV-SMQPVSIAIAAYSTEFQSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYW 312
           +AL  A+    PVS+AI AY  +FQ YK G++    C  +LDHAV IVG+G TE+G  YW
Sbjct: 120 EALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYG-TENGVPYW 178

Query: 313 LIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 347
           ++KNSWG  WG+ GY +I R    CGI + +SYP+
Sbjct: 179 IVKNSWGTDWGENGYFRIARGVNECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.73
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.71
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.58
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.91
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.33
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.05
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.52
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.5
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 88.76
COG4990195 Uncharacterized protein conserved in bacteria [Fun 85.75
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-84  Score=590.41  Aligned_cols=300  Identities=37%  Similarity=0.719  Sum_probs=266.9

Q ss_pred             hhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCCCCCCCC
Q 018958           41 QSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRS  120 (348)
Q Consensus        41 ~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~~~  120 (348)
                      ....+.|..|+.+|+|+|.+.+|...|+.+|+.|+..++++++....|.++|+|+|+|||+|||++++++.+..... ..
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~-~~  143 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSK-LP  143 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhcccccccc-Cc
Confidence            45588999999999999999999999999999999999988876545899999999999999999999887664111 10


Q ss_pred             CCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCC
Q 018958          121 TTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCL  200 (348)
Q Consensus       121 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~  200 (348)
                      ......  .......||++||||++|.||||||||+||||||||+++++|+++.+++|++++||||+|+||+.. ++||+
T Consensus       144 ~~~~~~--~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~-d~gC~  220 (372)
T KOG1542|consen  144 GDAAEA--PIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC-DNGCN  220 (372)
T ss_pred             cccccC--cCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc-CCcCC
Confidence            000111  112334899999999999999999999999999999999999999999999999999999999985 89999


Q ss_pred             CCChHHHHHHHHHcCCccCCCCCCCCCCCC-CCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhc
Q 018958          201 GGSREKAFAYIIQNQGIATEDEYPYQAVPG-TCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQ  278 (348)
Q Consensus       201 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~  278 (348)
                      ||.+..|+.|+++..|+..|++|||++..+ .|........+.|.+|..++ .||++|.+.|. +|||+|+|++.  .+|
T Consensus       221 GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~--~mQ  297 (372)
T KOG1542|consen  221 GGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAK--PMQ  297 (372)
T ss_pred             CCChhHHHHHHHHhCCccccccCCccccCCCccccchhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchH--HHH
Confidence            999999999988888999999999999888 99998888899999999998 59999999987 89999999965  899


Q ss_pred             cccCceEeC---CCCCC-CCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeee
Q 018958          279 SYKEGIFNG---VCGTQ-LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL  347 (348)
Q Consensus       279 ~y~~Giy~~---~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~  347 (348)
                      +|++||..+   .|... ++|||+|||||.+.-.++|||||||||++|||+||+|+.||.|.|||+++++-+.
T Consensus       298 ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~  370 (372)
T KOG1542|consen  298 FYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAA  370 (372)
T ss_pred             HhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccccccccccchhhhh
Confidence            999999998   38755 8999999999997338999999999999999999999999999999999988664

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-67
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 5e-66
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 3e-65
1pci_A322 Procaricain Length = 322 4e-65
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 2e-60
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 3e-59
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 5e-59
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 5e-59
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 6e-59
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 8e-59
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 1e-58
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 1e-58
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 6e-58
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 6e-58
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 7e-58
2act_A220 Crystallographic Refinement Of The Structure Of Act 2e-57
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-57
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 2e-56
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-54
3hwn_A258 Cathepsin L With Az13010160 Length = 258 7e-54
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 3e-53
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-53
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 6e-52
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 2e-51
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-50
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-49
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 2e-49
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 2e-49
3of8_A221 Structural Basis For Reversible And Irreversible In 2e-49
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 3e-49
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 3e-49
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-49
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 4e-49
1ppo_A216 Determination Of The Structure Of Papaya Protease O 8e-49
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 8e-49
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 1e-48
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-48
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 2e-48
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-48
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 2e-48
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 2e-48
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 2e-48
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-48
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 3e-48
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-48
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 3e-48
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 3e-48
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 4e-48
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 5e-48
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 5e-48
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 7e-48
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 7e-48
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 7e-48
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 7e-48
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 3e-47
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 3e-47
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 3e-47
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 4e-47
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-47
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 5e-47
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 8e-47
2vhs_A217 Cathsilicatein, A Chimera Length = 217 1e-46
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 2e-46
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 2e-46
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 3e-43
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-42
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 2e-41
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 2e-39
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-39
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-36
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 2e-35
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 6e-35
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 5e-33
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 5e-33
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 6e-33
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-32
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 3e-31
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 4e-29
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 1e-25
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 6e-25
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 4e-24
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 5e-24
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 8e-23
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 8e-23
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 2e-21
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 9e-20
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 2e-18
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 2e-18
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 2e-18
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 2e-18
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 3e-18
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 3e-18
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 4e-18
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 1e-17
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-17
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-17
1mir_A322 Rat Procathepsin B Length = 322 1e-16
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 1e-16
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 9e-15
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-14
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 9e-13
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 1e-11
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-11
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 8e-09
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-08
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-08
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-08
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-05
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 5/217 (2%)
Query: 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNG 195
           VP S+DWR KGAVT +K+Q +CG CWAF+ + AVEGI +I++  L+ LSEQ+L+DC T+ 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 196 NNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPA-AAKISNYEEVPSGDE 254
           N GC GG  + AF +I Q  GI TE  YPY+A  GTC  +++ A A  I  +E VP  DE
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDE 121
Query: 255 QALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLI 314
            ALLKAV+ QPVS+AI A  ++FQ Y EG+F G CGT+LDH V IVG+GTT DG  YW +
Sbjct: 122 NALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTV 181
Query: 315 KNSWGNTWGDAGYMKIVR----DEGLCGIGTRSSYPL 347
           KNSWG  WG+ GY+++ R     EGLCGI   +SYP+
Sbjct: 182 KNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 218
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-168
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-165
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-163
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-163
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-157
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-157
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-154
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-152
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-129
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-128
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-127
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-127
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-125
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-125
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-125
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-122
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-122
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-122
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-122
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-120
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-119
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-119
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-118
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-118
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-117
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-115
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-115
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-114
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-114
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-114
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-111
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 5e-98
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 4e-93
3u8e_A222 Papain-like cysteine protease; papain-like cystein 4e-93
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 3e-91
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 9e-86
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-79
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 5e-74
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 2e-72
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 6e-36
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 6e-26
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 4e-09
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 3e-08
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  470 bits (1213), Expect = e-168
 Identities = 137/314 (43%), Positives = 193/314 (61%), Gaps = 12/314 (3%)

Query: 38  THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFS 97
           T  + ++++   WM  H + Y++  EK  R +IFK+NL YI++ NK+ N +Y LG N+F+
Sbjct: 13  TSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFA 71

Query: 98  DLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKEC 157
           DL+NDEF   Y G  + +   +S      ++ N  + ++P ++DWR KGAVTP+++Q  C
Sbjct: 72  DLSNDEFNEKYVGSLIDATIEQSYDE---EFINEDIVNLPENVDWRKKGAVTPVRHQGSC 128

Query: 158 GCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGI 217
           G CWAF+AVA VEGI KIR+G L++LSEQ+L+DC    ++GC GG    A  Y+ +N GI
Sbjct: 129 GSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN-GI 186

Query: 218 ATEDEYPYQAVPGTCSAAQKPA-AAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTE 276
               +YPY+A  GTC A Q      K S    V   +E  LL A++ QPVS+ + +    
Sbjct: 187 HLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRP 246

Query: 277 FQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD--- 333
           FQ YK GIF G CGT++D AVT VG+G    G  Y LIKNSWG  WG+ GY++I R    
Sbjct: 247 FQLYKGGIFEGPCGTKVDGAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGN 305

Query: 334 -EGLCGIGTRSSYP 346
             G+CG+   S YP
Sbjct: 306 SPGVCGLYKSSYYP 319
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.79
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.74
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.09
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.06
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 96.9
3erv_A236 Putative C39-like peptidase; structural genomics, 89.54
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=5.1e-86  Score=626.79  Aligned_cols=306  Identities=40%  Similarity=0.738  Sum_probs=272.7

Q ss_pred             CCchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCC
Q 018958           38 THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMP  114 (348)
Q Consensus        38 ~~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~  114 (348)
                      .++..++.+|++||++|+|+|.+.+|+.+|++||++|+++|++||++   ++.+|++|+|+|+|||.|||++++++.+++
T Consensus        13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~   92 (331)
T 3qj3_A           13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP   92 (331)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred             CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence            36778999999999999999999899999999999999999999986   568999999999999999999998876653


Q ss_pred             CCCCCCCCCccccccC----CCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCC--cccCCHHHH
Q 018958          115 SPSHRSTTSSTFKYQN----LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGN--LIQLSEQQL  188 (348)
Q Consensus       115 ~~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~--~~~LS~q~l  188 (348)
                      ......  ...+....    ....+||++||||+.|+||||||||.||||||||++++||++++++++.  .++||+|+|
T Consensus        93 ~~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L  170 (331)
T 3qj3_A           93 ADLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL  170 (331)
T ss_dssp             SSTTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred             cccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence            221110  11111110    0113799999999999999999999999999999999999999999998  899999999


Q ss_pred             hhhcCCCCCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeE
Q 018958          189 LDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVS  267 (348)
Q Consensus       189 ~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~  267 (348)
                      +||+.. +.||+||++..|+.|+.+++|+++|++|||.+..+.|........+++.+|..++..++++||++|+ +|||+
T Consensus       171 vdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~  249 (331)
T 3qj3_A          171 VDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVA  249 (331)
T ss_dssp             HHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEE
T ss_pred             hhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEE
Confidence            999986 8999999999999999988899999999999999999987667778999999998779999999998 69999


Q ss_pred             EEEEecchhhccccCceEeCC-CC-CCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCcee
Q 018958          268 IAIAAYSTEFQSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSS  344 (348)
Q Consensus       268 v~~~~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~  344 (348)
                      |+|++. .+|+.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++
T Consensus       250 v~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~  327 (331)
T 3qj3_A          250 VAFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVAS  327 (331)
T ss_dssp             EEECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE
T ss_pred             EEEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCcee
Confidence            999998 45999999999986 75 678999999999987 8999999999999999999999999996 9999999999


Q ss_pred             eeeC
Q 018958          345 YPLA  348 (348)
Q Consensus       345 ~p~~  348 (348)
                      ||++
T Consensus       328 ~p~v  331 (331)
T 3qj3_A          328 VPTL  331 (331)
T ss_dssp             EEEC
T ss_pred             eeeC
Confidence            9986
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 348
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 2e-75
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-64
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1e-64
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-64
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 2e-63
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 7e-61
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-60
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-60
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 3e-60
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 7e-59
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 1e-58
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 2e-58
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 8e-58
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 8e-58
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 2e-56
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 6e-55
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 6e-52
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 5e-51
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 9e-48
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 2e-46
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 1e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 3e-06
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  233 bits (594), Expect = 2e-75
 Identities = 118/320 (36%), Positives = 179/320 (55%), Gaps = 17/320 (5%)

Query: 38  THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTN 94
           T + S+     KW A H R Y    E+  R  ++++N++ IE  N+E   G  ++ +  N
Sbjct: 3   TFDHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN 61

Query: 95  QFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQ 154
            F D+T++EFR +  G++   P           +Q     + P S+DWR+KG VTP+KNQ
Sbjct: 62  AFGDMTSEEFRQVMNGFQNRKPRKGKV------FQEPLFYEAPRSVDWREKGYVTPVKNQ 115

Query: 155 KECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNG-NNGCLGGSREKAFAYIIQ 213
            +CG CWAF+A  A+EG    ++G LI LSEQ L+DCS    N GC GG  + AF Y+  
Sbjct: 116 GQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 175

Query: 214 NQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAY 273
           N G+ +E+ YPY+A   +C    K + A  + + ++P  ++  +    ++ P+S+AI A 
Sbjct: 176 NGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235

Query: 274 STEFQSYKEGIFNGV-CGTQ-LDHAVTIVGFGT---TEDGANYWLIKNSWGNTWGDAGYM 328
              F  YKEGI+    C ++ +DH V +VG+G      D   YWL+KNSWG  WG  GY+
Sbjct: 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 295

Query: 329 KIVRD-EGLCGIGTRSSYPL 347
           K+ +D    CGI + +SYP 
Sbjct: 296 KMAKDRRNHCGIASAASYPT 315
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.77
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.68
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 96.78
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 96.56
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-79  Score=579.40  Aligned_cols=301  Identities=41%  Similarity=0.826  Sum_probs=261.4

Q ss_pred             chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCCCC
Q 018958           40 EQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSP  116 (348)
Q Consensus        40 ~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~  116 (348)
                      +..++.+|++||++|+|+|.+ +|+.+|++||.+|+++|++||++   ++.+|++|+|+|+|||.|||.+++++......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            467888999999999999976 57789999999999999999985   56799999999999999999999876554332


Q ss_pred             CCCCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-C
Q 018958          117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-G  195 (348)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~  195 (348)
                      ...    ......  ...+||++||||+.|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.. +
T Consensus        84 ~~~----~~~~~~--~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~  157 (316)
T d1cs8a_          84 RKG----KVFQEP--LFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG  157 (316)
T ss_dssp             SCC----EECCCC--TTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred             ccC----ccccCc--ccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhcccccc
Confidence            211    111111  123899999999999999999999999999999999999999999999999999999999865 5


Q ss_pred             CCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecc
Q 018958          196 NNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYS  274 (348)
Q Consensus       196 ~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~  274 (348)
                      +.+|.||.+..|+.|+..++++..|.+|||.+....|..........+..+.... .+++.|+++|. .|||++++++..
T Consensus       158 ~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~  236 (316)
T d1cs8a_         158 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGH  236 (316)
T ss_dssp             CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCS
T ss_pred             CCCCCCCchHHHHHHHHhcCccccccccccccccccccccccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEecc
Confidence            7899999999999999998668899999999988888876555566667776665 57888999887 799999999987


Q ss_pred             hhhccccCceEeCC-CC-CCCCeEEEEEEEeec---CCCccEEEEEcCCCCCCCCCceEEEEcC-CCcccccCceeeeeC
Q 018958          275 TEFQSYKEGIFNGV-CG-TQLDHAVTIVGFGTT---EDGANYWLIKNSWGNTWGDAGYMKIVRD-EGLCGIGTRSSYPLA  348 (348)
Q Consensus       275 ~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~  348 (348)
                      .+|+.|++|||..+ |+ ..++|||+|||||.+   .++.+|||||||||++|||+|||||+|+ .|+|||++.++||+|
T Consensus       237 ~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~yP~v  316 (316)
T d1cs8a_         237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV  316 (316)
T ss_dssp             HHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred             chhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeeeeeeC
Confidence            88999999999886 66 467999999999975   3688999999999999999999999999 599999999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure