Citrus Sinensis ID: 018968

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MVLIFERSGSFKINTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
ccEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccEEEEEEEEcccccccEEEEEEcccccccccccEEEEEccccccccccccccccc
cEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHccccHHHHHHHHcccccccccccccccccccccccccccccccEEcccccccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHccccccccEcccHHHHHHHHHHHccEcEccccccccccccccccHHHEcEccccEEEcccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEcEEEccEEEEEEEccEcccccEccEEEEEccccHHHcccccEEEEc
mvlifersgsfkintiPMFIIIILLVSCASqvvssrsthEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEgnrtyklgtnrfsdltNDEFRALYtgykmpspshrsttsstfkyqnlsmtdvptsldwrdkkavtpikdqqecgccwAFSAVAAVEGITKISGANLIQLSEQQlvdcstngnngcgggtMEKAFEYIIQNqgiatedeypyqavQGTCSAAQKAAAAKIsnyeevpsgdEQALLKAVSMQPVSIGIAAYTTEFksykegifngvcgtqlDHAVTIVgfgttedgaNYWLIKnswgdtwgdagYMKILRdeglcgigtqssypla
mvlifersgsfkinTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKankegnrtyklgtnrfsdltNDEFRALYTgykmpspshrsttsstfkyqnLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLcgigtqssypla
MVLIFERSGSFKINTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRsttsstFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTngnngcgggTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSaaqkaaaakISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
**LIFERSGSFKINTIPMFIIIILLVSCASQVV****************W**************EMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGY************************VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQK******************ALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIG********
*V*****SGSFKINTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTG********************LSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
MVLIFERSGSFKINTIPMFIIIILLVSCA*************VVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKM***********TFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGT************SNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
MVLIFERSGSFKINTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYK***************YQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVLIFERSGSFKINTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
O65493355 Xylem cysteine proteinase no no 0.876 0.859 0.471 4e-85
Q9STL4361 KDEL-tailed cysteine endo no no 0.945 0.911 0.448 2e-84
P43297 462 Cysteine proteinase RD21a no no 0.933 0.703 0.451 2e-84
P25803362 Vignain OS=Phaseolus vulg N/A no 0.939 0.903 0.460 7e-84
O65039360 Vignain OS=Ricinus commun N/A no 0.850 0.822 0.490 1e-82
P25250373 Cysteine proteinase EP-B N/A no 0.879 0.820 0.447 3e-82
P25249371 Cysteine proteinase EP-B N/A no 0.882 0.827 0.443 6e-82
P12412362 Vignain OS=Vigna mungo PE N/A no 0.867 0.834 0.477 2e-81
Q9SUS9371 Probable cysteine protein no no 0.939 0.881 0.427 2e-81
Q9STL5364 KDEL-tailed cysteine endo no no 0.928 0.887 0.448 3e-81
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  315 bits (806), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 215/314 (68%), Gaps = 9/314 (2%)

Query: 38  THEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFS 97
           T+   ++E+ E WM++H ++YK   EK  RF++F+ENL +I++ N E N +Y LG N F+
Sbjct: 42  TNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEIN-SYWLGLNEFA 100

Query: 98  DLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQEC 157
           DLT++EF+  Y G   P  S +   S+ F+Y+++  TD+P S+DWR K AV P+KDQ +C
Sbjct: 101 DLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI--TDLPKSVDWRKKGAVAPVKDQGQC 158

Query: 158 GCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGI 217
           G CWAFS VAAVEGI +I+  NL  LSEQ+L+DC T  N+GC GG M+ AF+YII   G+
Sbjct: 159 GSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGL 218

Query: 218 ATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTE 276
             ED+YPY   +G C   ++      IS YE+VP  D+++L+KA++ QPVS+ I A   +
Sbjct: 219 HKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRD 278

Query: 277 FKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD--- 333
           F+ YK G+FNG CGT LDH V  VG+G+++ G++Y ++KNSWG  WG+ G++++ R+   
Sbjct: 279 FQFYKGGVFNGKCGTDLDHGVAAVGYGSSK-GSDYVIVKNSWGPRWGEKGFIRMKRNTGK 337

Query: 334 -EGLCGIGTQSSYP 346
            EGLCGI   +SYP
Sbjct: 338 PEGLCGINKMASYP 351
Probable thiol protease.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|Q9SUS9|CPR4_ARATH Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL5|CEP3_ARATH KDEL-tailed cysteine endopeptidase CEP3 OS=Arabidopsis thaliana GN=CEP3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
255563110344 cysteine protease, putative [Ricinus com 0.945 0.956 0.559 1e-105
224076970340 predicted protein [Populus trichocarpa] 0.951 0.973 0.538 1e-104
255564908342 cysteine protease, putative [Ricinus com 0.939 0.956 0.557 1e-102
255564910341 cysteine protease, putative [Ricinus com 0.936 0.956 0.563 1e-101
18408828341 putative cysteine proteinase [Arabidopsi 0.954 0.973 0.547 1e-101
124484401339 cysteine proteinase precursor [Ipomoea n 0.948 0.973 0.521 1e-101
297819568341 hypothetical protein ARALYDRAFT_348033 [ 0.954 0.973 0.533 1e-100
225443827340 PREDICTED: vignain-like [Vitis vinifera] 0.933 0.955 0.549 1e-100
24285904341 cysteine proteinase precursor [Ipomoea b 0.896 0.914 0.547 1e-100
13491750339 cysteine protease [Ipomoea batatas] 0.896 0.920 0.551 1e-100
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/338 (55%), Positives = 245/338 (72%), Gaps = 9/338 (2%)

Query: 18  MFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEY 77
           + ++ +LLV+  +    SRS HE S+   H+ WM Q+GR YK  +EKE RFKIFKEN+E+
Sbjct: 9   LVLMAMLLVTLWASQSWSRSLHEASMELRHKTWMTQYGRVYKGNVEKEKRFKIFKENVEF 68

Query: 78  IEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRST-TSSTFKYQNLSMTDV 136
           IE  N  GN+ YKLG N F+DLTN+EFRA + GY M   SH+S+  + +F+Y+N+  T V
Sbjct: 69  IESFNNNGNKPYKLGINAFTDLTNEEFRASHNGYTMSMSSHQSSYRTKSFRYENV--TAV 126

Query: 137 PTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNG- 195
           P SLDWR K AVT IKDQ +CGCCWAFSAVAA+EGITK+S   LI LSEQ+LVDC T+G 
Sbjct: 127 PPSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGTLISLSEQELVDCDTSGM 186

Query: 196 NNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKA-AAAKISNYEEVPSGDE 254
           + GC GG M+ AFE+II+N G+ TE  YPY+ V G+C+  + A  AAKI+ YE VP+ DE
Sbjct: 187 DQGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDGSCNTRKAANHAAKITGYENVPAYDE 246

Query: 255 QALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLI 314
           +AL KAV+ QPVS+ I A  + F+ Y  GIF G CGT+LDH VT+VG+GT++DG  YWL+
Sbjct: 247 EALRKAVANQPVSVAIDAGESAFQHYSSGIFTGDCGTELDHGVTVVGYGTSDDGTKYWLV 306

Query: 315 KNSWGDTWGDAGYMKILRD----EGLCGIGTQSSYPLA 348
           KNSWG +WG+ GY+++ RD    EGLCGI  + SYP A
Sbjct: 307 KNSWGTSWGEDGYIRMERDIDAKEGLCGIAMEPSYPTA 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa] gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18408828|ref|NP_566920.1| putative cysteine proteinase [Arabidopsis thaliana] gi|12324451|gb|AAG52191.1|AC012329_18 putative cysteine proteinase; 15366-14136 [Arabidopsis thaliana] gi|6723404|emb|CAB66413.1| cysteine protease-like protein [Arabidopsis thaliana] gi|332645009|gb|AEE78530.1| putative cysteine proteinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil] Back     alignment and taxonomy information
>gi|297819568|ref|XP_002877667.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp. lyrata] gi|297323505|gb|EFH53926.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|24285904|gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas] gi|56961686|gb|AAK15148.2| cysteine proteinase-like protein [Ipomoea batatas] Back     alignment and taxonomy information
>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.954 0.973 0.507 2e-88
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.954 0.954 0.504 1.6e-86
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.942 0.950 0.477 4.4e-84
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.962 0.943 0.469 6.6e-81
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.942 0.947 0.467 6.6e-81
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.945 0.950 0.444 1.1e-76
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.876 0.859 0.452 4.5e-75
TAIR|locus:2117979356 AT4G23520 [Arabidopsis thalian 0.933 0.912 0.440 7.3e-75
TAIR|locus:2090614 452 AT3G19390 [Arabidopsis thalian 0.956 0.736 0.428 1.4e-73
TAIR|locus:2825832 462 RD21A "responsive to dehydrati 0.870 0.655 0.450 1.7e-73
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 175/345 (50%), Positives = 222/345 (64%)

Query:    13 INTIPMFIIIILLVSCASQVVSSRSTHEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFK 72
             + +I  F++ ILL S  S V S     E S VE HE+WM++  R Y D+ EK  RF+IF 
Sbjct:     1 MTSIVFFLLAILLSSRTSGVTSRGGLFEASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFT 60

Query:    73 ENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRXXXXXX-----FK 127
              NL+++E  N   N+TY L  N FSDLT++EF+A YTG  +P    R           F+
Sbjct:    61 NNLKFVESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRISTTDSHETVSFR 120

Query:   128 YQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQ 187
             Y+N+  T    S+DW  + AVT +K QQ+CGCCWAFSAVAAVEG+TKI+   L+ LSEQQ
Sbjct:   121 YENVGETG--ESMDWIQEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIANGELVSLSEQQ 178

Query:   188 LVDCSTXXXXXXXXXTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSXXXXXXXXXISNYE 247
             L+DCST          M KAF+YI +NQGI TED YPYQ  Q TC          IS YE
Sbjct:   179 LLDCSTENNGCGGGI-MWKAFDYIKENQGITTEDNYPYQGAQQTCESNHLAAAT-ISGYE 236

Query:   248 EVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTED 307
              VP  DE+ALLKAVS QPVS+ I     EF  Y  GIFNG CGTQL HAVTIVG+G +E+
Sbjct:   237 TVPQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTQLTHAVTIVGYGVSEE 296

Query:   308 GANYWLIKNSWGDTWGDAGYMKILRD----EGLCGIGTQSSYPLA 348
             G  YWL+KNSWG++WG+ GYM+I+RD    +G+CG+ + + YP+A
Sbjct:   297 GIKYWLLKNSWGESWGENGYMRIMRDVDSPQGMCGLASLAYYPVA 341
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117979 AT4G23520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.44300.87640.8221yesno
P25774CATS_HUMAN3, ., 4, ., 2, 2, ., 2, 70.38460.91950.9667yesno
P25326CATS_BOVIN3, ., 4, ., 2, 2, ., 2, 70.40530.91950.9667yesno
Q8HY81CATS_CANFA3, ., 4, ., 2, 2, ., 2, 70.39940.91950.9667yesno
Q23894CYSP3_DICDI3, ., 4, ., 2, 2, ., -0.37790.95110.9821yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-110
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-105
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 2e-79
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 7e-76
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 4e-75
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 4e-57
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 3e-42
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 6e-39
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 9e-33
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 1e-32
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 4e-24
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 4e-22
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 9e-16
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 1e-14
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 1e-12
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 5e-09
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  318 bits (818), Expect = e-110
 Identities = 114/215 (53%), Positives = 144/215 (66%), Gaps = 5/215 (2%)

Query: 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNG 195
           +P S DWR+K AVTP+KDQ +CG CWAFSAV A+EG   I    L+ LSEQQLVDC T G
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDT-G 59

Query: 196 NNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDE 254
           NNGC GG  + AFEYI +N GI TE +YPY A  GTC   +  +  AKI  Y +VP  DE
Sbjct: 60  NNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDE 119

Query: 255 QALLKAV-SMQPVSIGIAAYTTEFKSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYW 312
           +AL  A+    PVS+ I AY  +F+ YK G++    C  +LDHAV IVG+G TE+G  YW
Sbjct: 120 EALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYG-TENGVPYW 178

Query: 313 LIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPL 347
           ++KNSWG  WG+ GY +I R    CGI +++SYP+
Sbjct: 179 IVKNSWGTDWGENGYFRIARGVNECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.92
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.76
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.72
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.56
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 99.32
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 98.21
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.15
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.97
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.64
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 89.82
COG4990195 Uncharacterized protein conserved in bacteria [Fun 84.72
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5.3e-84  Score=583.19  Aligned_cols=299  Identities=36%  Similarity=0.719  Sum_probs=266.4

Q ss_pred             hHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCC-CCCCC
Q 018968           41 QSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMP-SPSHR  119 (348)
Q Consensus        41 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~-~~~~~  119 (348)
                      ..+.++|..|+.+|+|+|.+.+|..+|+.||+.|+..+++++.....|..+|+|+|+|||+|||++++++.+.. .....
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~  144 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG  144 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCcc
Confidence            35588999999999999999999999999999999999999887545899999999999999999999987653 11111


Q ss_pred             CCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCC
Q 018968          120 STTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGC  199 (348)
Q Consensus       120 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc  199 (348)
                      ....  ..  ..+...||++||||++|.||||||||+||||||||+++++|++++++++++++||||+|+||+.. +.||
T Consensus       145 ~~~~--~~--~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~-d~gC  219 (372)
T KOG1542|consen  145 DAAE--AP--IEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC-DNGC  219 (372)
T ss_pred             cccc--Cc--CCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc-CCcC
Confidence            1001  11  12335899999999999999999999999999999999999999999999999999999999987 8999


Q ss_pred             CCCcHHHHHHHHHHcCCCCCCCCCCCccCCC-ccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccc
Q 018968          200 GGGTMEKAFEYIIQNQGIATEDEYPYQAVQG-TCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEF  277 (348)
Q Consensus       200 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f  277 (348)
                      +||.+..|++|+++.+|+..|++|||++..+ .|........+.|.+|..++ .||++|.+.|.+ |||+|+|++.  .+
T Consensus       220 ~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~--~m  296 (372)
T KOG1542|consen  220 NGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAK--PM  296 (372)
T ss_pred             CCCChhHHHHHHHHhCCccccccCCccccCCCccccchhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchH--HH
Confidence            9999999999988888999999999999888 99998888899999999998 489999998866 9999999975  89


Q ss_pred             cccCCceEec---CCCCC-CCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceec
Q 018968          278 KSYKEGIFNG---VCGTQ-LDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPL  347 (348)
Q Consensus       278 ~~y~~Giy~~---~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~  347 (348)
                      +.|++||..+   .|++. ++|||+|||||...-.++|||||||||++|||+||+|+.|+.|.|||+++++-+.
T Consensus       297 Q~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~  370 (372)
T KOG1542|consen  297 QFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAA  370 (372)
T ss_pred             HHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccccccccccchhhhh
Confidence            9999999988   48765 8999999999998338899999999999999999999999999999999987654

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 1e-61
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 4e-59
1pci_A322 Procaricain Length = 322 2e-58
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 4e-57
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 8e-55
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-54
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 6e-54
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-53
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 7e-53
2act_A220 Crystallographic Refinement Of The Structure Of Act 2e-52
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 2e-52
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 9e-52
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-51
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 9e-51
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-50
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 5e-50
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 1e-48
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-48
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 5e-48
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-47
3hwn_A258 Cathepsin L With Az13010160 Length = 258 7e-47
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 3e-46
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-46
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 7e-44
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 7e-44
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 1e-42
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-42
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-42
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 2e-42
3of8_A221 Structural Basis For Reversible And Irreversible In 2e-42
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 2e-42
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-42
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 2e-42
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 3e-42
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-42
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 3e-42
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 3e-42
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-42
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 5e-42
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 6e-42
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 6e-42
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 1e-41
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 1e-41
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 1e-41
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 1e-41
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-41
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 2e-41
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 3e-41
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 4e-41
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 4e-41
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 4e-41
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 4e-41
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 5e-41
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 6e-41
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 6e-41
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 9e-41
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 9e-41
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-40
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 2e-40
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 2e-40
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 8e-40
2vhs_A217 Cathsilicatein, A Chimera Length = 217 1e-39
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 2e-39
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-39
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 4e-38
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 4e-37
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 5e-37
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 7e-35
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 4e-33
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 8e-33
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 4e-31
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 4e-31
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 6e-31
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 2e-30
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-29
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 3e-28
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 3e-28
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 3e-26
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 1e-23
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 9e-23
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 2e-22
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 2e-22
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 2e-21
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-19
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 4e-18
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 4e-15
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 5e-15
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 6e-15
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 8e-15
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 1e-13
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-13
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-13
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 7e-13
1mir_A322 Rat Procathepsin B Length = 322 4e-12
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 7e-11
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 7e-11
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 7e-11
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 8e-11
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 9e-11
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 9e-11
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 1e-10
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 1e-10
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-10
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-09
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-08
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 3e-07
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-07
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-06
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/217 (52%), Positives = 140/217 (64%), Gaps = 5/217 (2%)
Query: 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTXX 195
           VP S+DWR K AVT +KDQ +CG CWAFS + AVEGI +I    L+ LSEQ+LVDC T  
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 196 XXXXXXXTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSXXXXXX-XXXISNYEEVPSGDE 254
                   M+ AFE+I Q  GI TE  YPY+A  GTC           I  +E VP  DE
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDE 121
Query: 255 QALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLI 314
            ALLKAV+ QPVS+ I A  ++F+ Y EG+F G CGT+LDH V IVG+GTT DG  YW +
Sbjct: 122 NALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTV 181
Query: 315 KNSWGDTWGDAGYMKILR----DEGLCGIGTQSSYPL 347
           KNSWG  WG+ GY+++ R     EGLCGI  ++SYP+
Sbjct: 182 KNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 218
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-170
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-165
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-164
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-163
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-160
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-158
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-155
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-154
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-129
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-129
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-128
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-127
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-126
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-126
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-125
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-123
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-123
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-122
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-122
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-120
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-120
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-120
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-120
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-119
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-118
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-117
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-116
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-116
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-115
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-115
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-113
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 3e-99
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 4e-92
3u8e_A222 Papain-like cysteine protease; papain-like cystein 7e-92
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 2e-90
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 2e-85
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 3e-80
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 1e-72
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 2e-72
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 1e-36
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 8e-26
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-09
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  474 bits (1222), Expect = e-170
 Identities = 138/314 (43%), Positives = 190/314 (60%), Gaps = 12/314 (3%)

Query: 38  THEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFS 97
           T  + ++++   WM  H + Y++  EK  RF+IFK+NL YI++ NK+ N +Y LG N F+
Sbjct: 13  TSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFA 71

Query: 98  DLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQEC 157
           DL+NDEF   Y G  + +   +S      ++ N  + ++P ++DWR K AVTP++ Q  C
Sbjct: 72  DLSNDEFNEKYVGSLIDATIEQSYDE---EFINEDIVNLPENVDWRKKGAVTPVRHQGSC 128

Query: 158 GCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGI 217
           G CWAFSAVA VEGI KI    L++LSEQ+LVDC    ++GC GG    A EY+ +N GI
Sbjct: 129 GSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN-GI 186

Query: 218 ATEDEYPYQAVQGTCSAAQKAA-AAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTE 276
               +YPY+A QGTC A Q      K S    V   +E  LL A++ QPVS+ + +    
Sbjct: 187 HLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRP 246

Query: 277 FKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD--- 333
           F+ YK GIF G CGT++D AVT VG+G    G  Y LIKNSWG  WG+ GY++I R    
Sbjct: 247 FQLYKGGIFEGPCGTKVDGAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGN 305

Query: 334 -EGLCGIGTQSSYP 346
             G+CG+   S YP
Sbjct: 306 SPGVCGLYKSSYYP 319
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.8
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.74
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.51
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.47
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.35
3erv_A236 Putative C39-like peptidase; structural genomics, 89.2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=6.5e-86  Score=621.50  Aligned_cols=305  Identities=40%  Similarity=0.739  Sum_probs=271.7

Q ss_pred             chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCC
Q 018968           39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPS  115 (348)
Q Consensus        39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~  115 (348)
                      ++..++.+|++|+++|+|.|.+.+|+.+|++||++|+++|++||++   ++.+|++|+|+|+|||.+||++++++.+++.
T Consensus        14 ~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~   93 (331)
T 3qj3_A           14 PSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPA   93 (331)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCS
T ss_pred             CCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccccc
Confidence            4678899999999999999999899999999999999999999986   5689999999999999999999998766532


Q ss_pred             CCCCCCCCccccccC----CCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCC--CcCCCHHHHh
Q 018968          116 PSHRSTTSSTFKYQN----LSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGAN--LIQLSEQQLV  189 (348)
Q Consensus       116 ~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~  189 (348)
                      .....  ...+....    ....+||++||||++|+|+||||||.||||||||++++||++++++++.  .++||+|+|+
T Consensus        94 ~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lv  171 (331)
T 3qj3_A           94 DLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLV  171 (331)
T ss_dssp             STTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHH
T ss_pred             ccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHh
Confidence            21110  11111110    0123799999999999999999999999999999999999999999998  8999999999


Q ss_pred             hhcCCCCCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEE
Q 018968          190 DCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSI  268 (348)
Q Consensus       190 dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v  268 (348)
                      ||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|.........+|.+|..++..++++|+++|++ |||+|
T Consensus       172 dC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v  250 (331)
T 3qj3_A          172 DCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAV  250 (331)
T ss_dssp             HHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEE
T ss_pred             hhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEE
Confidence            99986 88999999999999999988999999999999999998776667789999999987789999999987 99999


Q ss_pred             EEEeccccccccCCceEecC-CC-CCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccce
Q 018968          269 GIAAYTTEFKSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSY  345 (348)
Q Consensus       269 ~~~~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~y  345 (348)
                      ++++. .+|+.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++|
T Consensus       251 ~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~  328 (331)
T 3qj3_A          251 AFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASV  328 (331)
T ss_dssp             EECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEE
T ss_pred             EEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceee
Confidence            99998 45999999999885 75 578999999999998 8999999999999999999999999997 99999999999


Q ss_pred             ecC
Q 018968          346 PLA  348 (348)
Q Consensus       346 p~~  348 (348)
                      |++
T Consensus       329 p~v  331 (331)
T 3qj3_A          329 PTL  331 (331)
T ss_dssp             EEC
T ss_pred             eeC
Confidence            986
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 348
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 6e-75
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1e-64
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 6e-64
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 5e-62
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 7e-62
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 5e-60
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 7e-60
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 4e-59
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 6e-58
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 3e-57
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 1e-56
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 2e-56
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 4e-56
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 5e-56
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 3e-55
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-52
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-50
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 2e-50
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 5e-46
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 6e-46
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 2e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 1e-06
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  232 bits (591), Expect = 6e-75
 Identities = 118/320 (36%), Positives = 179/320 (55%), Gaps = 17/320 (5%)

Query: 38  THEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTN 94
           T + S+     KW A H R Y    E+  R  ++++N++ IE  N+E   G  ++ +  N
Sbjct: 3   TFDHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN 61

Query: 95  RFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQ 154
            F D+T++EFR +  G++   P           +Q     + P S+DWR+K  VTP+K+Q
Sbjct: 62  AFGDMTSEEFRQVMNGFQNRKPRKGKV------FQEPLFYEAPRSVDWREKGYVTPVKNQ 115

Query: 155 QECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNG-NNGCGGGTMEKAFEYIIQ 213
            +CG CWAFSA  A+EG        LI LSEQ LVDCS    N GC GG M+ AF+Y+  
Sbjct: 116 GQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 175

Query: 214 NQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAY 273
           N G+ +E+ YPY+A + +C    K + A  + + ++P  ++  +    ++ P+S+ I A 
Sbjct: 176 NGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235

Query: 274 TTEFKSYKEGIFNGV-CGTQ-LDHAVTIVGFG---TTEDGANYWLIKNSWGDTWGDAGYM 328
              F  YKEGI+    C ++ +DH V +VG+G   T  D   YWL+KNSWG+ WG  GY+
Sbjct: 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 295

Query: 329 KILRD-EGLCGIGTQSSYPL 347
           K+ +D    CGI + +SYP 
Sbjct: 296 KMAKDRRNHCGIASAASYPT 315
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.81
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.76
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 97.12
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 96.94
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-79  Score=572.98  Aligned_cols=301  Identities=41%  Similarity=0.816  Sum_probs=260.3

Q ss_pred             hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCCC
Q 018968           40 EQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPSP  116 (348)
Q Consensus        40 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~  116 (348)
                      ++.++..|++||++|+|+|.+ +|+.+|++||++|++.|++||++   ++.+|++|+|+|+|||.+||.+++++......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            467888999999999999976 57889999999999999999986   56799999999999999999999876554332


Q ss_pred             CCCCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-C
Q 018968          117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-G  195 (348)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~  195 (348)
                      ...    .....  ....+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.. +
T Consensus        84 ~~~----~~~~~--~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~  157 (316)
T d1cs8a_          84 RKG----KVFQE--PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG  157 (316)
T ss_dssp             SCC----EECCC--CTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred             ccC----ccccC--cccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhcccccc
Confidence            211    11111  1224899999999999999999999999999999999999999999999999999999999865 5


Q ss_pred             CCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEecc
Q 018968          196 NNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYT  274 (348)
Q Consensus       196 ~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~  274 (348)
                      +.+|.||.+..|++|+..++++..|..+||.+....|..........+..+.... .+++.|+++|.. |||++++++..
T Consensus       158 ~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~  236 (316)
T d1cs8a_         158 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGH  236 (316)
T ss_dssp             CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCS
T ss_pred             CCCCCCCchHHHHHHHHhcCccccccccccccccccccccccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEecc
Confidence            7889999999999999999668899999999988888776555666777777665 467888888876 99999999976


Q ss_pred             ccccccCCceEecC-CC-CCCCcEEEEEEEeec---CCCccEEEEEcCCCCCCCCCceEEEEeC-CCcccccCccceecC
Q 018968          275 TEFKSYKEGIFNGV-CG-TQLDHAVTIVGFGTT---EDGANYWLIKNSWGDTWGDAGYMKILRD-EGLCGIGTQSSYPLA  348 (348)
Q Consensus       275 ~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~yp~~  348 (348)
                      .+|+.|++|||..+ |+ ..++|||+|||||.+   .++.+|||||||||++|||+|||||+|+ .|+|||++.++||++
T Consensus       237 ~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~yP~v  316 (316)
T d1cs8a_         237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV  316 (316)
T ss_dssp             HHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred             chhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeeeeeeC
Confidence            78999999999775 65 457999999999975   3688999999999999999999999998 499999999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure