Citrus Sinensis ID: 019022

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
Protein Sequence
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccHHHHHHHHEEEcEEEEEEEEcccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccccccc
Coil and Loop (DISEMBL)
metnnsykngALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFifrsntaslplfkfpvisrICFLSLVGSFFRILGytgiayssptlasmignltpgFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLykgptimstasipaqslhwtpqstrsrWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIisapicfvgesnlsawrlkpdiELASIVYSAFFGLSFITVVHTFglrmkgpvytaIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGkandeagknkdsckipllqsp
Flexible Loop (DISEMBL)
metnnsykngALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKandeagknkdsckipllqsp
Low Complexity Region (SEG)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWViggllllisnllisVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSiaiaaiTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered region (IsUnstruct)
********NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Disordered Region (DISOPRED)
************FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM********************WVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW**********************
Disordered Region (DISEMBL)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered Region (DISPRO)
****NSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS**************SRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	347	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.951	0.896	0.545	3e-93
F4KHA8	370	WAT1-related protein At5g	no	no	0.956	0.897	0.536	6e-89
F4JK59	347	WAT1-related protein At4g	no	no	0.925	0.925	0.524	5e-77
Q94JU2	367	WAT1-related protein At3g	no	no	0.948	0.896	0.454	5e-74
Q945L4	339	WAT1-related protein At5g	no	no	0.925	0.946	0.433	2e-69
Q9LRS5	353	WAT1-related protein At3g	no	no	0.933	0.917	0.450	9e-65
Q56X95	355	WAT1-related protein At3g	no	no	0.962	0.940	0.439	1e-62
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.976	0.941	0.424	6e-62
F4IYZ0	358	WAT1-related protein At3g	no	no	0.962	0.932	0.425	4e-60
F4I5D5	375	WAT1-related protein At1g	no	no	0.988	0.914	0.339	8e-46

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  342 bits (877), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 184/337 (54%), Positives = 232/337 (68%), Gaps = 7/337 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 198

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL     LISVWYI+QT+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LKP
Sbjct: 199 LLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKP 258

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
           DI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHLG
Sbjct: 259 DISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLG 318

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 344
           SVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 319 SVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  327 bits (839), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 182/339 (53%), Positives = 234/339 (69%), Gaps = 7/339 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL    LL+SVWYI+QT+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP
Sbjct: 200 LLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKP 259

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
            + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+LG
Sbjct: 260 GVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLG 319

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 346
           SVIG +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 320 SVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  288 bits (736), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 174/332 (52%), Positives = 226/332 (68%), Gaps = 11/332 (3%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAM+A ECT VG +I++K AT +G S++VFVFY+Y   TLVLLLL     RS   SLP 
Sbjct: 18  FTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSR--SLPT 75

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K  +  +I  L+L+G   R+ G  GI YSSPTL+S I NLTP FTFILAI FRME + L
Sbjct: 76  AKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVML 135

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLL 192
            S +T AKIIGT+VS+SGA+++VLYKGP ++  AS           S  S W+IGGLLL 
Sbjct: 136 RSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASF---------TSFESSWIIGGLLLG 186

Query: 193 ISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIEL 252
           +  LL+SVW+I+QT  M++YP E  V   Y L AT+IS  +C + E +L++W+LKP   L
Sbjct: 187 LQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSL 246

Query: 253 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIG 312
           AS++YS  F  S  +V+HT+GL +KGPVY ++FKPLSIAIA   + IFL + LHLGSVIG
Sbjct: 247 ASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIG 306

Query: 313 GVITCVGFYTVLWGKANDEAGKNKDSCKIPLL 344
            VI   GFYTV+WGKA +++ K     +  LL
Sbjct: 307 SVILSFGFYTVIWGKAREDSTKTVSDSEQSLL 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  278 bits (711), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/341 (45%), Positives = 212/341 (62%), Gaps = 12/341 (3%)

Query: 14  TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF 73
           TA+V  EC  VG N +FK AT KGMS+ VF+ YSY    L+LL      FRS T  LP  
Sbjct: 14  TALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRT--LPPM 71

Query: 74  KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALS 133
            F ++ +I  L ++G    I+GYTGI YSSPTLAS I NLTP FTF+LA++FRME+++  
Sbjct: 72  NFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFK 131

Query: 134 SLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLI 193
             S+ AK++GT+VS+ GA +V LY GP +++  S P+ SL    QST   W++G   L +
Sbjct: 132 RTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPPSVSLR--SQSTNPNWILGAGFLAV 188

Query: 194 SNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIEL 252
               + +WYI+QTQ M+ YPAEF V   Y +  +  +A +    E N L AW++KP+I L
Sbjct: 189 EYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIAL 248

Query: 253 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIG 312
            SIV S  FG      +HT+ LR+KGP++ A+FKPLSIAIA     IFL ++L++GS+IG
Sbjct: 249 VSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIG 308

Query: 313 GVITCVGFYTVLWGKA------NDEAGKNKDSCKIPLLQSP 347
             +  +GFYTV+WGKA       D+   N +      L SP
Sbjct: 309 ATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDSP 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  263 bits (671), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/346 (43%), Positives = 220/346 (63%), Gaps = 25/346 (7%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           ++G + TAMV  E + VG N + K ATSKG+S FV + YSY   +L+LL L  F FRS  
Sbjct: 9   RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSR- 67

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP   F ++  +  L L+ S F+ILGY GI YSSPTL+S + N+ P FTFILA++FRM
Sbjct: 68  -SLPPLTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRM 126

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIG 187
           EN++L   S+ AK++GT++S+ GA++V LY GP +M               S+ S W+IG
Sbjct: 127 ENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLM---------------SSHSDWIIG 171

Query: 188 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSAWRL 246
           G LL +  +L+SV Y++   TM  YP+  VVTL++ +   ++ A +  + E  N  AW +
Sbjct: 172 GGLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVI 231

Query: 247 KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALH 306
           + DI L ++V +      +  V+HT+ +  KGPVY ++FKPLSI IAA+++FIFL E+L+
Sbjct: 232 RFDITLITVVATGILNSGY-YVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLY 290

Query: 307 LGSVIGGVITCVGFYTVLWGKANDE------AGKNKDSCKIPLLQS 346
           LGSV+GG++  +GFY VLWGKA ++      A ++  S   PLL +
Sbjct: 291 LGSVMGGILISIGFYMVLWGKAKEDKVDIIGAIESSPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  247 bits (631), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 216/331 (65%), Gaps = 7/331 (2%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E  +VG + +FK+ATSKG++ + F+ YSY   +L+LL    F  RS  
Sbjct: 10  REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSR- 68

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L L+GS + I GY GI YSSPTLAS I N+TP  TFILAIIFRM
Sbjct: 69  -SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA---QSLHWTPQSTRSRW 184
           E ++    S+ AK++GT++S+ GA++VVLY GP +   +S P    + L     S+ S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSA 243
           +IGG LL I ++ +SV +I+Q + M  YPA F V+ LY +  +I+++ I  V E +N S 
Sbjct: 188 LIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSV 247

Query: 244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSE 303
           W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA + S +FL++
Sbjct: 248 WIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLND 306

Query: 304 ALHLGSVIGGVITCVGFYTVLWGKANDEAGK 334
           +L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 307 SLYLGCLIGGLLITLGFYAVMWGKANEEKDQ 337

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/346 (43%), Positives = 212/346 (61%), Gaps = 12/346 (3%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           ++  L TAM+A E   V  N +FK ATSKG++ + F+ YSY   ++VLL     IF   +
Sbjct: 9   RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLP--SHIFSYRS 66

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++ +I  L L+GS + I G+ GI YS+PTLAS I N+ P  TFILAIIFRM
Sbjct: 67  RSLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRM 126

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW---TPQSTRSRW 184
           E  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P   L        S+ S W
Sbjct: 127 EKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDW 186

Query: 185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSA 243
           +IGG LL I + L+ V +I+Q   MKLYPA F V+  Y L A+I+++ I  V E +N S 
Sbjct: 187 IIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSI 246

Query: 244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSE 303
           W +  DI L  IV    F   +   +H + +R KGPVY AIF+PLSI IA I   IFL +
Sbjct: 247 WIIHFDITLVCIVVGGIFNPGYYA-IHLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGD 305

Query: 304 ALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK---DSCKIPLLQS 346
           + +LGS++GG++  +GFYTV+WGKA +  GK +    S + PLL  
Sbjct: 306 SFYLGSLVGGILISLGFYTVMWGKAKE--GKTQFLSLSEETPLLDE 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  238 bits (607), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 222/349 (63%), Gaps = 10/349 (2%)

Query: 3   TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
           T + ++  A+F TAM+  E ++VG + +FK ATSKG++  ++ F  Y+     LLLL   
Sbjct: 7   TASPWRREAVFLTAMLVVETSVVGISTLFKFATSKGLN--IYPFLGYSYLLASLLLLPSL 64

Query: 62  IFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFIL 121
            F + ++SLP     ++S+I  L  +GS + I GY GI YSSPTLAS I N+TP  TFIL
Sbjct: 65  FFTNRSSSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFIL 124

Query: 122 AIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSL-HWTP--Q 178
           AIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +   ++P   
Sbjct: 125 AIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLS 184

Query: 179 STRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE 238
           S+ S W+IGG LL +  + +SV +I+Q   M +YPA F V+ LY +  +I+++ I  V E
Sbjct: 185 SSNSDWLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVE 244

Query: 239 -SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITS 297
            +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA +  
Sbjct: 245 KNNPSVWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMG 303

Query: 298 FIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK--NKDSCKIPLL 344
            IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PLL
Sbjct: 304 AIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPLL 352

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  231 bits (590), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/348 (42%), Positives = 217/348 (62%), Gaps = 14/348 (4%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E +IVG + +FK+ATSKG++  ++ F SY+     LLLL    F + +
Sbjct: 10  REAVFLTAMLAGETSIVGLSTLFKVATSKGLN--IYPFLSYSYLLASLLLLPSLFFTNRS 67

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L  +GS + I G  GI YS+PTLAS IGN+ P  TFILA+IFRM
Sbjct: 68  RSLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA---QSLHWTPQSTRSRW 184
           E ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P    + L     S++S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSA 243
           +IGG +L I  + +SV +I+QT  M+ YP  F V++LY L  +I+++ I  V E +N S 
Sbjct: 188 LIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSI 247

Query: 244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSE 303
           W +  DI L +IV +     S   V+H++ +R K P+Y AIFKPLSI IA +   IFL++
Sbjct: 248 WIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLND 306

Query: 304 ALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK-----DSCKIPLLQS 346
           +L+LG +IGG++  +GFY V+WGKAN+E  KNK        K PLL S
Sbjct: 307 SLYLGCLIGGILITLGFYVVMWGKANEE--KNKLLSFSGKEKTPLLLS 352

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  184 bits (467), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 190/368 (51%), Gaps = 25/368 (6%)

Query: 1   METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP 60
           ME          F AM   E   +   I+ K A + GMS FVFV Y+ A  + +LLL F 
Sbjct: 1   MEVKVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGS-ILLLPFS 59

Query: 61  FIF-RSNTASLPLFKFPVISRICFLSLVGSF-FRILGYTGIAYSSPTLASMIGNLTPGFT 118
           F+F R+      +F +P++ R+ FL   G F F+ L + G+ +SSP +   +G   P F+
Sbjct: 60  FLFHRNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFS 119

Query: 119 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI-PAQSLHWTP 177
           F+L+II     L   + ST AK++GT+VS+SGA +  LYKGP I   +S  P + L   P
Sbjct: 120 FLLSIILGRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVP 179

Query: 178 Q-----STRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAP 232
           +     +    W +G + L ++   +S++ ++QT T+K YP    V   Y +  TI    
Sbjct: 180 KLLVYYNLPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLL 239

Query: 233 ICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAI 292
                E +LSAW+++P+ +L  I+ +  FG    T VH    +MKGP Y  +FKP  I  
Sbjct: 240 FSLFMERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFW 299

Query: 293 AAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK---------ANDEAG-------KNK 336
           A +    F   +LH GSV+G  I  VG++TV WG+         +N+E         +++
Sbjct: 300 ATLFGTSFFVNSLHYGSVLGAAIAGVGYFTVSWGQLKESEEKQSSNEERKSIKTIHHRDE 359

Query: 337 DSCKIPLL 344
           D  K+PLL
Sbjct: 360 DEYKVPLL 367

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
42568214	368	nodulin MtN21 /EamA-like transporter fam	0.951	0.896	0.545	2e-91
334188088	382	nodulin MtN21 /EamA-like transporter fam	0.951	0.863	0.545	3e-91
225452524	359	PREDICTED: auxin-induced protein 5NG4 [V	0.991	0.958	0.516	1e-90
296087698	344	unnamed protein product [Vitis vinifera]	0.948	0.956	0.533	7e-90
297801560	368	nodulin MtN21 family protein [Arabidopsi	0.948	0.894	0.536	2e-88
356524437	427	PREDICTED: auxin-induced protein 5NG4-li	0.959	0.779	0.534	1e-87
297801562	367	hypothetical protein ARALYDRAFT_330483 [	0.956	0.904	0.538	3e-87
15242612	370	nodulin MtN21 /EamA-like transporter fam	0.956	0.897	0.536	4e-87
10177510	346	nodulin-like protein [Arabidopsis thalia	0.948	0.950	0.532	1e-85
255552660	353	Auxin-induced protein 5NG4, putative [Ri	0.953	0.937	0.565	5e-85

>gi|42568214|ref|NP_198840.2| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|10177511|dbj|BAB10905.1| nodulin-like protein [Arabidopsis thaliana] gi|30725298|gb|AAP37671.1| At5g40240 [Arabidopsis thaliana] gi|110743630|dbj|BAE99652.1| hypothetical protein [Arabidopsis thaliana] gi|332007140|gb|AED94523.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  342 bits (877), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 184/337 (54%), Positives = 232/337 (68%), Gaps = 7/337 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 198

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL     LISVWYI+QT+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LKP
Sbjct: 199 LLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKP 258

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
           DI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHLG
Sbjct: 259 DISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLG 318

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 344
           SVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 319 SVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188088|ref|NP_001190441.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007141|gb|AED94524.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  341 bits (875), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 184/337 (54%), Positives = 232/337 (68%), Gaps = 7/337 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A EC  VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 35  FAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSR--RLPA 92

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P+  +I  L LVG   +I G  GIAYSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 93  AKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 152

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS----IPAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++VVLYKGP ++++AS    +P  +LH    S  S W+IGG
Sbjct: 153 RSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIESSWIIGG 212

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL     LISVWYI+QT+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LKP
Sbjct: 213 LLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKP 272

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
           DI LA+I+YS  F   F  + HT+GL +KGPVY ++F+PLSIAIA     IFL +ALHLG
Sbjct: 273 DISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLG 332

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 344
           SVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 333 SVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 369

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452524|ref|XP_002279776.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 184/356 (51%), Positives = 239/356 (67%), Gaps = 12/356 (3%)

Query: 1   METNNSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP 60
           M   +  ++   F  MV  E T V  N++FK ATS+GMS +VF+ YSYA  TL+L  L  
Sbjct: 1   MGDGHCLRDMVPFLGMVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLL- 59

Query: 61  FIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI 120
           FIF      LP FKF ++ +IC L  +G    I+ Y GI YSSPTLAS+IGNLTP  TF+
Sbjct: 60  FIFNGKRLLLPPFKFSLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFM 119

Query: 121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ--SLHWTPQ 178
           LAI FRME LAL SLS+WAKI GT+ S+SGA++VVLYKG  + ST+S P Q  SLH    
Sbjct: 120 LAIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQLTSTSS-PLQFISLHQPLN 178

Query: 179 STRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE 238
           S + +WVIGGLLL+  +LL+S+WYI+Q Q M++YP E VV  L  L  TIISAP+C + E
Sbjct: 179 SQQMKWVIGGLLLVAEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLIAE 238

Query: 239 SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSF 298
            NLS WR++ DI LA+IV+SAF+G +F  VV T+ +R+KGPVY A+F PLSI IA     
Sbjct: 239 KNLSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGV 298

Query: 299 IFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN--------KDSCKIPLLQS 346
           +FL + L+LGS+IG ++  +GFY V WGKA +E  ++          + KIPLL S
Sbjct: 299 MFLGDTLYLGSIIGAIVISIGFYIVTWGKAKEETIEDFGVGSLESLSNPKIPLLLS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087698|emb|CBI34954.3| unnamed protein product [Vitis vinifera]

 Score =  337 bits (863), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 182/341 (53%), Positives = 234/341 (68%), Gaps = 12/341 (3%)

Query: 16  MVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKF 75
           MV  E T V  N++FK ATS+GMS +VF+ YSYA  TL+L  L  FIF      LP FKF
Sbjct: 1   MVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLL-FIFNGKRLLLPPFKF 59

Query: 76  PVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSL 135
            ++ +IC L  +G    I+ Y GI YSSPTLAS+IGNLTP  TF+LAI FRME LAL SL
Sbjct: 60  SLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFMLAIFFRMEKLALRSL 119

Query: 136 STWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ--SLHWTPQSTRSRWVIGGLLLLI 193
           S+WAKI GT+ S+SGA++VVLYKG  + ST+S P Q  SLH    S + +WVIGGLLL+ 
Sbjct: 120 SSWAKITGTIASISGALIVVLYKGLQLTSTSS-PLQFISLHQPLNSQQMKWVIGGLLLVA 178

Query: 194 SNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELA 253
            +LL+S+WYI+Q Q M++YP E VV  L  L  TIISAP+C + E NLS WR++ DI LA
Sbjct: 179 EDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLIAEKNLSVWRVELDIALA 238

Query: 254 SIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGG 313
           +IV+SAF+G +F  VV T+ +R+KGPVY A+F PLSI IA     +FL + L+LGS+IG 
Sbjct: 239 AIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGVMFLGDTLYLGSIIGA 298

Query: 314 VITCVGFYTVLWGKANDEAGKN--------KDSCKIPLLQS 346
           ++  +GFY V WGKA +E  ++          + KIPLL S
Sbjct: 299 IVISIGFYIVTWGKAKEETIEDFGVGSLESLSNPKIPLLLS 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801560|ref|XP_002868664.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314500|gb|EFH44923.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 182/339 (53%), Positives = 228/339 (67%), Gaps = 10/339 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           F AM A ECT VG N +FK AT +G+S++VFVFYSY  +TL+LL L     RS    LP 
Sbjct: 21  FAAMFAVECTTVGSNTLFKAATIRGLSFYVFVFYSYVVSTLLLLPLSLIFGRSR--RLPS 78

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K P   +I  L LVG   +I G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 79  AKSPFFFKIFLLGLVGFMSQIAGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQVRL 138

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIG ++S+SGA++++LYKGP +++ AS     P  SLH    S  S+W IGG
Sbjct: 139 RSSATQAKIIGAILSISGALVILLYKGPQVLAAASFTPLSPTISLHQHLASLESKWTIGG 198

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL     LISVWYI+QT+ M++YP E  V   Y LFAT+IS P+C   ESNL++W LKP
Sbjct: 199 LLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCIFAESNLTSWVLKP 258

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
           DI LA+I+YS  F   F  + HT+GL MKGPVY ++F+PLSIAIA     IFL ++LHLG
Sbjct: 259 DISLAAIIYSGVFVSLFSALTHTWGLHMKGPVYISLFRPLSIAIAVAMGAIFLGDSLHLG 318

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP 347
           SVIG +I C+GFYTV+WGKA ++  K     +    QSP
Sbjct: 319 SVIGSMILCIGFYTVIWGKAREDTIKTVAGSE----QSP 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524437|ref|XP_003530835.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/344 (53%), Positives = 237/344 (68%), Gaps = 11/344 (3%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA ECT VG N++FK AT KG+SY+ F+ YS+A +TL LLL  PF+FR +   LP 
Sbjct: 74  FTAMVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFAVSTLFLLLPLPFVFRWSRG-LPP 132

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
               +I RI  L ++G   ++ GY G+ Y+SPTLAS + NL P FTFILAIIFRME +AL
Sbjct: 133 LNLSLIFRIFLLGVIGLTAQLCGYKGLKYTSPTLASALSNLIPAFTFILAIIFRMEKVAL 192

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSR--WVIGGLL 190
            S ST AKI+G+LVS+SGA++VVLYKGP I+ST+S        +P  + S+  WV+GG L
Sbjct: 193 RSPSTMAKILGSLVSISGALIVVLYKGPIILSTSSPQPSPTTDSPMDSTSQTNWVLGGSL 252

Query: 191 LLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDI 250
           L I  LL+ +WYI+QT  MK YPAEF+V  LY L  T+IS PIC + E+NLS+W++  DI
Sbjct: 253 LAIEFLLVPIWYIVQTNIMKQYPAEFIVVFLYNLTGTLISTPICLLLEANLSSWKINCDI 312

Query: 251 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV 310
            L +I+YS FF     ++VHT+GL +KGPVY +IFKPLSI +AA  S IFL +AL+ G+V
Sbjct: 313 TLIAIIYSGFFSTGLSSLVHTWGLHLKGPVYISIFKPLSIVVAAALSVIFLGDALYFGTV 372

Query: 311 IGGVITCVGFYTVLWGKANDEAGKNKD--------SCKIPLLQS 346
           +G VI   GFY VLWGKA +E     D        + K PLLQS
Sbjct: 373 VGAVILSFGFYAVLWGKAKEEELTVVDFDDIRPPSNTKSPLLQS 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801562|ref|XP_002868665.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata] gi|297314501|gb|EFH44924.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 183/340 (53%), Positives = 232/340 (68%), Gaps = 8/340 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVGATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFYIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQVVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++VVLYKGP +++ A++    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVVLYKGPKVLTDATLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL    LL+SVWYI+QT+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP
Sbjct: 200 LLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLTSFVLKP 259

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
            + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     IFL +AL+L 
Sbjct: 260 GVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVIFLGDALYLR 319

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN--KDSCKIPLLQS 346
           SVIG VI  +GFYTV+WGKA +++ K       + PLL S
Sbjct: 320 SVIGSVILSLGFYTVIWGKAREDSTKTVADTEQQSPLLPS 359

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242612|ref|NP_198839.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007139|gb|AED94522.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  327 bits (839), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 182/339 (53%), Positives = 234/339 (69%), Gaps = 7/339 (2%)

Query: 13  FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
           FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP 
Sbjct: 22  FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPS 79

Query: 73  FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
            K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct: 80  AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query: 133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGG 188
            S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGG
Sbjct: 140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query: 189 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
           LLL    LL+SVWYI+QT+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP
Sbjct: 200 LLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKP 259

Query: 249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 308
            + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+LG
Sbjct: 260 GVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLG 319

Query: 309 SVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 346
           SVIG +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 320 SVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177510|dbj|BAB10904.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/336 (53%), Positives = 231/336 (68%), Gaps = 7/336 (2%)

Query: 16  MVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKF 75
           MVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L     RS    LP  K 
Sbjct: 1   MVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSK--RLPSAKT 58

Query: 76  PVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSL 135
           PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L S 
Sbjct: 59  PVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSS 118

Query: 136 STWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVIGGLLL 191
           +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+IGGLLL
Sbjct: 119 ATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLL 178

Query: 192 LISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIE 251
               LL+SVWYI+QT+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP + 
Sbjct: 179 ATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVS 238

Query: 252 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI 311
           LAS++YS     SF +V+HT+GL +KGPVY ++FKPLSI IA     +FL +AL+LGSVI
Sbjct: 239 LASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVI 298

Query: 312 GGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 346
           G +I  +GFYTV+WGKA +++ K    + + PLL S
Sbjct: 299 GSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 334

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552660|ref|XP_002517373.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223543384|gb|EEF44915.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  320 bits (821), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 198/350 (56%), Positives = 242/350 (69%), Gaps = 19/350 (5%)

Query: 7   YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSN 66
           YKN   F AMVAAEC  VG N IFK A+ KGM+Y+VF+FY+    TLVLL +  F  RS 
Sbjct: 7   YKNILPFAAMVAAECAAVGVNTIFKAASLKGMNYYVFIFYTTLINTLVLLPILFFFCRST 66

Query: 67  TAS--LPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAII 124
           T +  L LF+FPV S+IC + ++G   +I  Y GI YSSPTL+S + NLT  FTFILAI+
Sbjct: 67  TINPRLSLFRFPVSSKICIVGIIGVITQIASYKGIEYSSPTLSSALSNLTLPFTFILAIV 126

Query: 125 FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRW 184
            RME L   S  T AKIIGT+VS+SGA++VVLYKGP I  T+ I         +ST+S W
Sbjct: 127 LRMEKLDFKSSRTQAKIIGTVVSISGALMVVLYKGPVIGLTSLI---------RSTKSDW 177

Query: 185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAW 244
           VIGGLLL I   L SVWYIIQTQ +++YPAE  VT L  L++TII+AP+CF+ E NLSAW
Sbjct: 178 VIGGLLLSIQYSLYSVWYIIQTQIIQIYPAEIQVTFLVNLYSTIIAAPVCFLAEPNLSAW 237

Query: 245 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEA 304
           RL+PDIELA++ YS  FG SFIT+VH +GLR KGPVY   FKPLSIAIAA    +FL +A
Sbjct: 238 RLRPDIELAALAYSGLFGASFITIVHLWGLRQKGPVYVTSFKPLSIAIAAAMGALFLGDA 297

Query: 305 LHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS--------CKIPLLQS 346
           LHLGSVIG +   VGFY ++WGK  +E  +  DS         + PLLQS
Sbjct: 298 LHLGSVIGAIFISVGFYALIWGKLQEEKIEECDSDTSNSPINSRSPLLQS 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.956	0.897	0.501	3.7e-80
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.930	0.930	0.489	7.9e-78
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.904	0.855	0.453	1.6e-70
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.939	0.923	0.422	1.4e-62
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.974	0.938	0.408	6.2e-62
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.933	0.912	0.417	2.7e-61
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.933	0.905	0.413	3.1e-60
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.783	0.802	0.402	2.4e-51
TAIR|locus:2020688	375	UMAMIT36 "AT1G70260" [Arabidop	0.936	0.866	0.335	6.4e-44
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.953	0.850	0.318	1.9e-42

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 170/339 (50%), Positives = 221/339 (65%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             FTAMVA EC  VG N +FK AT +G+S++VFVFY+Y   TLVLL L   IF   +  LP 
Sbjct:    22 FTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPL-SLIF-GRSKRLPS 79

Query:    73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
              K PV   I  L+LVG    I+G  GI YSSPTLAS I NLTP FTF LA+IFRME + L
Sbjct:    80 AKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVL 139

Query:   133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI----PAQSLHWTPQSTRSRWVXXX 188
              S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+    P  SL+    S  S W+   
Sbjct:   140 RSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGG 199

Query:   189 XXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 248
                        VWYI+QT+ M+LYP E  V  LY L AT+ISAP+C   E +L+++ LKP
Sbjct:   200 LLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKP 259

Query:   249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHLG 308
              + LAS++YS     SF +V+HT+GL +KGPVY ++FKPLS         +FL +AL+LG
Sbjct:   260 GVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLG 319

Query:   309 SVIGGVITCVGFYTVLWGKANDEAGKNKDSCK-IPLLQS 346
             SVIG +I  +GFYTV+WGKA +++ K     +  PLL S
Sbjct:   320 SVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLLPS 358

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 164/335 (48%), Positives = 215/335 (64%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             FTAM+A ECT VG +I++K AT +G S++VFVFY+Y   TLVLLLL   IF   + SLP 
Sbjct:    18 FTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLL-SLIF-GRSRSLPT 75

Query:    73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLAL 132
              K  +  +I  L+L+G   R+ G  GI YSSPTL+S I NLTP FTFILAI FRME + L
Sbjct:    76 AKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVML 135

Query:   133 SSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVXXXXXXX 192
              S +T AKIIGT+VS+SGA+++VLYKGP ++  AS           S  S W+       
Sbjct:   136 RSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFT---------SFESSWIIGGLLLG 186

Query:   193 XXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIEL 252
                    VW+I+QT  M++YP E  V   Y L AT+IS  +C + E +L++W+LKP   L
Sbjct:   187 LQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSL 246

Query:   253 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHLGSVIG 312
             AS++YS  F  S  +V+HT+GL +KGPVY ++FKPLS       + IFL + LHLGSVIG
Sbjct:   247 ASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIG 306

Query:   313 GVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 346
              VI   GFYTV+WGKA +++ K   DS +  LL S
Sbjct:   307 SVILSFGFYTVIWGKAREDSTKTVSDSEQSLLLPS 341

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 145/320 (45%), Positives = 198/320 (61%)

Query:    14 TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF 73
             TA+V  EC  VG N +FK AT KGMS+ VF+ YSY    L+LL      FRS T  LP  
Sbjct:    14 TALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRT--LPPM 71

Query:    74 KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALS 133
              F ++ +I  L ++G    I+GYTGI YSSPTLAS I NLTP FTF+LA++FRME+++  
Sbjct:    72 NFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFK 131

Query:   134 SLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVXXXXXXXX 193
               S+ AK++GT+VS+ GA +V LY GP +++  S P+ SL    QST   W+        
Sbjct:   132 RTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPPSVSLR--SQSTNPNWILGAGFLAV 188

Query:   194 XXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIEL 252
                   +WYI+QTQ M+ YPAEF V   Y +  +  +A +    E N L AW++KP+I L
Sbjct:   189 EYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIAL 248

Query:   253 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEALHLGSVIG 312
              SIV S  FG      +HT+ LR+KGP++ A+FKPLS         IFL ++L++GS+IG
Sbjct:   249 VSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIG 308

Query:   313 GVITCVGFYTVLWGKANDEA 332
               +  +GFYTV+WGKA + A
Sbjct:   309 ATVITIGFYTVMWGKAKEVA 328

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 141/334 (42%), Positives = 207/334 (61%)

Query:     3 TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
             T + ++  A+F TAM+A E  +VG + +FK+ATSKG++ + F+ YSY   +L  LLL   
Sbjct:     4 TVSLWRREAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASL--LLLPSL 61

Query:    62 IFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFIL 121
              F   + SLP     ++S+I  L L+GS + I GY GI YSSPTLAS I N+TP  TFIL
Sbjct:    62 FFTDRSRSLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFIL 121

Query:   122 AIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW-TP--Q 178
             AIIFRME ++    S+ AK++GT++S+ GA++VVLY GP +   +S P  +    +P   
Sbjct:   122 AIIFRMEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLS 181

Query:   179 STRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE 238
             S+ S W+              V +I+Q + M  YPA F V+ LY +  +I+++ I  V E
Sbjct:   182 SSNSDWLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVE 241

Query:   239 -SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTS 297
              +N S W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLS       S
Sbjct:   242 KNNPSVWIIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMS 300

Query:   298 FIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 331
              +FL+++L+LG +IGG++  +GFY V+WGKAN+E
Sbjct:   301 AVFLNDSLYLGCLIGGLLITLGFYAVMWGKANEE 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 143/350 (40%), Positives = 213/350 (60%)

Query:     3 TNNSYKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPF 61
             T + ++  A+F TAM+  E ++VG + +FK ATSKG++ + F+ YSY    L  LLL P 
Sbjct:     7 TASPWRREAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYL---LASLLLLPS 63

Query:    62 IFRSN-TASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI 120
             +F +N ++SLP     ++S+I  L  +GS + I GY GI YSSPTLAS I N+TP  TFI
Sbjct:    64 LFFTNRSSSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFI 123

Query:   121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLH-WTP-- 177
             LAIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +   ++P  
Sbjct:   124 LAIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPL 183

Query:   178 QSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVG 237
              S+ S W+              V +I+Q   M +YPA F V+ LY +  +I+++ I  V 
Sbjct:   184 SSSNSDWLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVV 243

Query:   238 E-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXT 296
             E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLS       
Sbjct:   244 EKNNPSVWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVM 302

Query:   297 SFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK--DSCKIPLL 344
               IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PLL
Sbjct:   303 GAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPLL 352

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 139/333 (41%), Positives = 196/333 (58%)

Query:     8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
             ++  L TAM+A E   V  N +FK ATSKG++ + F+ YSY   ++VLL    F +RS  
Sbjct:     9 RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSR- 67

Query:    68 ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
              SLP     ++ +I  L L+GS + I G+ GI YS+PTLAS I N+ P  TFILAIIFRM
Sbjct:    68 -SLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRM 126

Query:   128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWT--P-QSTRSRW 184
             E  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P   L     P  S+ S W
Sbjct:   127 EKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDW 186

Query:   185 VXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSA 243
             +              V +I+Q   MKLYPA F V+  Y L A+I+++ I  V E +N S 
Sbjct:   187 IIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSI 246

Query:   244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSE 303
             W +  DI L  IV    F   +  + H + +R KGPVY AIF+PLS         IFL +
Sbjct:   247 WIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGD 305

Query:   304 ALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 336
             + +LGS++GG++  +GFYTV+WGKA +  GK +
Sbjct:   306 SFYLGSLVGGILISLGFYTVMWGKAKE--GKTQ 336

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 139/336 (41%), Positives = 207/336 (61%)

Query:     7 YKNGALF-TAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRS 65
             ++  A+F TAM+A E +IVG + +FK+ATSKG++ + F+ YSY    L  LLL P +F +
Sbjct:     8 WRREAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYL---LASLLLLPSLFFT 64

Query:    66 NTA-SLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAII 124
             N + SLP     ++S+I  L  +GS + I G  GI YS+PTLAS IGN+ P  TFILA+I
Sbjct:    65 NRSRSLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVI 124

Query:   125 FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHW-TP--QSTR 181
             FRME ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P  +    +P   S++
Sbjct:   125 FRMEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSK 184

Query:   182 SRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SN 240
             S W+              V +I+QT  M+ YP  F V++LY L  +I+++ I  V E +N
Sbjct:   185 SDWLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNN 244

Query:   241 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIF 300
              S W +  DI L +IV +     S   V+H++ +R K P+Y AIFKPLS         IF
Sbjct:   245 PSIWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIF 303

Query:   301 LSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 336
             L+++L+LG +IGG++  +GFY V+WGKAN+E  KNK
Sbjct:   304 LNDSLYLGCLIGGILITLGFYVVMWGKANEE--KNK 337

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 117/291 (40%), Positives = 173/291 (59%)

Query:    43 FVFYSYAATTLVLLLLFPFIFRS-NTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAY 101
             FV   Y+ T   LLLL P  F S  + SLP   F ++  +  L L+ S F+ILGY GI Y
Sbjct:    42 FVVLVYSYTFGSLLLL-PLTFFSFRSRSLPPLTFSILCNMGILGLIASAFQILGYNGIKY 100

Query:   102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT 161
             SSPTL+S + N+ P FTFILA++FRMEN++L   S+ AK++GT++S+ GA++V LY GP 
Sbjct:   101 SSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKSSVAKVLGTILSIIGALVVTLYHGPM 160

Query:   162 IMSTASIPAQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLL 221
             +MS+        H       S W+              V Y++   TM  YP+  VVTL+
Sbjct:   161 LMSS--------H-------SDWIIGGGLLALQYILVSVSYLVMAHTMGRYPSAVVVTLV 205

Query:   222 YCLFATIISAPICFVGES-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPV 280
             + +   ++ A +  + E  N  AW ++ DI L ++V +      +  V+HT+ +  KGPV
Sbjct:   206 HNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSGYY-VIHTWAVSHKGPV 264

Query:   281 YTAIFKPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 331
             Y ++FKPLS      ++FIFL E+L+LGSV+GG++  +GFY VLWGKA ++
Sbjct:   265 YLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILISIGFYMVLWGKAKED 315

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2020688 UMAMIT36 "AT1G70260" [Arabidopsis thaliana (taxid:3702)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 112/334 (33%), Positives = 167/334 (50%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLP 71
             F AM   E   +   I+ K A + GMS FVFV Y+ A  + +LLL F F+F R+      
Sbjct:    13 FVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGS-ILLLPFSFLFHRNERTEQS 71

Query:    72 LFKFPVISRICFLSLVGSF-FRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENL 130
             +F +P++ R+ FL   G F F+ L + G+ +SSP +   +G   P F+F+L+II     L
Sbjct:    72 IFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIILGRSKL 131

Query:   131 ALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI-PAQSLHWTPQ-----STRSRW 184
                + ST AK++GT+VS+SGA +  LYKGP I   +S  P + L   P+     +    W
Sbjct:   132 DWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLVYYNLPDNW 191

Query:   185 VXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAW 244
                            ++ ++QT T+K YP    V   Y +  TI         E +LSAW
Sbjct:   192 FLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDLSAW 251

Query:   245 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFLSEA 304
             +++P+ +L  I+ +  FG    T VH    +MKGP Y  +FKP            F   +
Sbjct:   252 KIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFFVNS 311

Query:   305 LHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS 338
             LH GSV+G  I  VG++TV WG+  +   K   +
Sbjct:   312 LHYGSVLGAAIAGVGYFTVSWGQLKESEEKQSSN 345

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 111/348 (31%), Positives = 170/348 (48%)

Query:    13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL 72
             + AM++ +    G  II  ++   GM+++V   Y +A  T V+    PF         P 
Sbjct:    12 YLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIA---PFALFHERKIRPK 68

Query:    73 FKFPVISRICFLSLVGSFF-RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLA 131
               F +  +I  L  +     + L Y G+ Y+S T AS   N+ P  TF+LAIIFR+E++ 
Sbjct:    69 MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVN 128

Query:   132 LSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM--------STASIPAQSLHWTPQSTR-- 181
                + + AK++GT+++VSGA+L+ LYKGP +            S  A   H    +    
Sbjct:   129 FKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMD 188

Query:   182 SRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL 241
               W+               ++I+Q+ T+K YPAE  +T L CL  T+    +  V   +L
Sbjct:   189 KHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDL 248

Query:   242 SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSXXXXXXTSFIFL 301
             SAW++  D  L +  YS          V    +R +GPV+ A F PL          + L
Sbjct:   249 SAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVL 308

Query:   302 SEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS-CK-IPLLQSP 347
             SE++HLGSVIG +   VG YTV+WGK  D+   + D  CK +P+ +SP
Sbjct:   309 SESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCKGLPI-KSP 355

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.5459	0.9510	0.8967	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	347
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	9e-81

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  249 bits (638), Expect = 9e-81
 Identities = 144/331 (43%), Positives = 210/331 (63%), Gaps = 7/331 (2%)

Query: 8   KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT 67
           +     TAM+A E ++VG + +FK+ATSKG++ + F+ YSY   +L+LL    F  RS  
Sbjct: 10  REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR- 68

Query: 68  ASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRM 127
            SLP     ++S+I  L  +GS + I GY GI YS+PTLAS I N+TP  TFILAIIFRM
Sbjct: 69  -SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRM 127

Query: 128 ENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP---QSTRSRW 184
           E ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P  +         S+ S W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW 187

Query: 185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGE-SNLSA 243
           +IGG LL I  + +SV +I+Q   M  YPA F V+ LY +  +I+++ I  V E +N S 
Sbjct: 188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV 247

Query: 244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSE 303
           W +  DI L +IV  A    S   V+H++ +R KGP+Y AIFKPLSI IA +   IFL++
Sbjct: 248 WIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND 306

Query: 304 ALHLGSVIGGVITCVGFYTVLWGKANDEAGK 334
           +L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 307 SLYLGCLIGGILITLGFYAVMWGKANEEKDQ 337

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	347
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.98
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.93
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.79
KOG1580	337	consensus UDP-galactose transporter related protei	99.64
KOG2766	336	consensus Predicted membrane protein [Function unk	99.63
COG2510	140	Predicted membrane protein [Function unknown]	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.55
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.55
KOG1581	327	consensus UDP-galactose transporter related protei	99.54
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.51
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.5
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.46
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.44
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.43
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.14
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.13
PRK15430	296	putative chloramphenical resistance permease RarD;	99.11
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.09
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.04
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.03
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.0
PRK13499	345	rhamnose-proton symporter; Provisional	98.98
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.96
KOG1582	367	consensus UDP-galactose transporter related protei	98.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.92
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.91
PRK11272	292	putative DMT superfamily transporter inner membran	98.88
PLN00411	358	nodulin MtN21 family protein; Provisional	98.82
PRK11689	295	aromatic amino acid exporter; Provisional	98.82
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.79
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.79
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.77
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.74
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.58
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.49
COG2962	293	RarD Predicted permeases [General function predict	98.48
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.47
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.46
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.33
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.32
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.23
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.18
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.15
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.03
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.96
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.9
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.88
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.85
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.75
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.72
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.72
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.66
COG2076	106	EmrE Membrane transporters of cations and cationic	97.65
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.62
PRK11431	105	multidrug efflux system protein; Provisional	97.55
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.45
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.31
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.26
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.22
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.19
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.13
COG2076	106	EmrE Membrane transporters of cations and cationic	97.08
PRK11431	105	multidrug efflux system protein; Provisional	96.94
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.91
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.9
PRK13499	345	rhamnose-proton symporter; Provisional	96.87
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.81
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.73
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.72
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.61
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.35
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.33
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.07
KOG2765	416	consensus Predicted membrane protein [Function unk	95.57
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.71
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.14
KOG1580	337	consensus UDP-galactose transporter related protei	93.95
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.92
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.09
KOG1581	327	consensus UDP-galactose transporter related protei	92.91
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	92.87
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	90.55
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	90.44
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.15
PRK02237	109	hypothetical protein; Provisional	83.27
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	81.3

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.1e-39  Score=300.90  Aligned_cols=336  Identities=43%  Similarity=0.739  Sum_probs=262.5

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHH
Q 019022            6 SYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS   85 (347)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   85 (347)
                      +.++.++++.|+...+.++...++.|.+++.+++|..+.++|+.+++++++++ ++.++++ ++.++.+++++..+.+.|
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~-~~~~~~~-~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPS-LFFTNRS-RSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHH-HHHHHHh-cccCcchHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999998 7664221 222444577888899999


Q ss_pred             HHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccC
Q 019022           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST  165 (347)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~  165 (347)
                      ++++.++.+++.|++|+++++++++.++.|+++++++++++.|+++.++|+++++++|++++++|+.++...+++.....
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            99877788999999999999999999999999999999997666666666688899999999999998874333221110


Q ss_pred             CC-CCcccC-CC-CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccc-c
Q 019022          166 AS-IPAQSL-HW-TPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-L  241 (347)
Q Consensus       166 ~~-~~~~~~-~~-~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  241 (347)
                      ++ ...+.. +. .......+...|+.++++++++|++|++.+|+..+++++....+++.+.++.+.+.+.....+.. .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            00 000000 00 01112334577999999999999999999999999997566777777777777777766665532 2


Q ss_pred             ccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhh
Q 019022          242 SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY  321 (347)
Q Consensus       242 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~  321 (347)
                      ..|....+.....+++.++. +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             ccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            23322233344557777775 56899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCcccccCCC---CCCCCCCCC
Q 019022          322 TVLWGKANDEAGKN---KDSCKIPLL  344 (347)
Q Consensus       322 l~~~~~~~~~~~~~---~~~~~~~~l  344 (347)
                      +..++++||.+.++   ++++..|++
T Consensus       325 l~~~~~~~~~~~~~~~~~~~~~~~~~  350 (358)
T PLN00411        325 AVMWGKANEEKDQLLSFSGKEKTPLL  350 (358)
T ss_pred             HHHhhhhhhhhhcccCccccccchhh
Confidence            99987776655554   334445543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=6.4e-33  Score=251.71  Aligned_cols=279  Identities=14%  Similarity=0.119  Sum_probs=230.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH-H
Q 019022           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-S   89 (347)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   89 (347)
                      .-.+..+...++||.++++.|... ++++|.+++++|+.++.++++++ ... ++  ++  ..++++++.....|.++ .
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~-~~~-~~--~~--~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAF-LLL-RG--HP--LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHH-HHH-hC--CC--CCcHHHHHHHHHHHHHHHH
Confidence            344557778899999999999996 69999999999999999998888 654 22  22  12466788888888887 7


Q ss_pred             HHHHHHHhhh-hccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCC
Q 019022           90 FFRILGYTGI-AYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI  168 (347)
Q Consensus        90 ~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~  168 (347)
                      .++.+++.+. +++++++++++.++.|+++.+++.+ +|||+      ++++++|++++++|+.++. .+++        
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~------~~~~~~~~~la~~Gv~ll~-~~~~--------  144 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRT------RKLEWLGIAIGLAGIVLLN-SGGN--------  144 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccC------chhHHHHHHHHHHhHHHHh-cCcc--------
Confidence            7888899999 9999999999999999999999986 69999      6669999999999998875 1111        


Q ss_pred             CcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccC
Q 019022          169 PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP  248 (347)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (347)
                                  .+....|+.++++++++||.+.+..|+..++ + +...+.+.+..+++.+.+.....+.+....  .+
T Consensus       145 ------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  208 (292)
T PRK11272        145 ------------LSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTAL--PT  208 (292)
T ss_pred             ------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCccccc--CC
Confidence                        1122469999999999999999999997543 3 455667788888888888776554322111  13


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCc
Q 019022          249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  328 (347)
Q Consensus       249 ~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  328 (347)
                      ...|..+++++++++++++.+|++++++.++++++.+.++||+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus       209 ~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        209 LSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999988876554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=1.9e-32  Score=249.35  Aligned_cols=279  Identities=13%  Similarity=0.104  Sum_probs=218.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH-HH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SF   90 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   90 (347)
                      ..+..++++++||.+++++|... ++++|..++++|+.++++.++++ ..  ++   +   .+   +......|++. ..
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~-~~--~~---~---~~---~~~~~~~g~~~~~~   71 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFF-VA--RP---K---VP---LNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHH-hc--CC---C---Cc---hHHHHHHHHHHHHH
Confidence            34668889999999999999997 68999999999999988766655 31  21   1   11   12344456655 55


Q ss_pred             HHHHHHhhhhc-cChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCC
Q 019022           91 FRILGYTGIAY-SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP  169 (347)
Q Consensus        91 ~~~~~~~al~~-~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~  169 (347)
                      ...+++.+++| .++++++++.+++|+++.+++++++|||+      +++++++++++++|+.++. ..+.         
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~------~~~~~~~~~l~~~Gv~ll~-~~~~---------  135 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERL------QGKQLAGIALAIFGVLVLI-EDSL---------  135 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHhHHHhc-cccC---------
Confidence            66677889998 58899999999999999999999999999      6669999999999998887 2111         


Q ss_pred             cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hHHHHHHHHHHHHHHHHHHHHhccccc---ccc
Q 019022          170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPA--EFVVTLLYCLFATIISAPICFVGESNL---SAW  244 (347)
Q Consensus       170 ~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  244 (347)
                               +..+....|+.+++.++++|+.|.+..|+..++.++  ......+.+..+.+.........+++.   ..+
T Consensus       136 ---------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (299)
T PRK11453        136 ---------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL  206 (299)
T ss_pred             ---------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence                     011223469999999999999999999998766542  234445555555554444444443321   111


Q ss_pred             cccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          245 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       245 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|+.|+++..
T Consensus       207 ~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        207 VTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence            11234578999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             ccCc
Q 019022          325 WGKA  328 (347)
Q Consensus       325 ~~~~  328 (347)
                      ++++
T Consensus       287 ~~~~  290 (299)
T PRK11453        287 FGLR  290 (299)
T ss_pred             cchh
Confidence            7654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.5e-32  Score=249.52  Aligned_cols=284  Identities=12%  Similarity=0.093  Sum_probs=213.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH
Q 019022            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (347)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (347)
                      +.++.+.++.+.++||.+++..|..+ ++++|..+.++|+.++.+++.++ ..  ++  +    .+++.++ ..+.+.++
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~-~~--~~--~----~~~~~~~-~~~~~~l~   70 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLT-VG--FP--R----LRQFPKR-YLLAGGLL   70 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHH-cc--cc--c----cccccHH-HHHHHhHH
Confidence            45678889999999999999999996 68999999999999999988876 31  11  1    1122222 33444444


Q ss_pred             -HHHHHHHHhhhhc----cChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccc
Q 019022           89 -SFFRILGYTGIAY----SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM  163 (347)
Q Consensus        89 -~~~~~~~~~al~~----~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~  163 (347)
                       ..++.+++.+++|    +++++++++.++.|+++.+++++++|||+      +++++.|++++++|+.++. ..++ ..
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~------~~~~~~g~~l~~~Gv~li~-~~~~-~~  142 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKA------NWLLIPGLLLALAGVAWVL-GGDN-GL  142 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCc------cHHHHHHHHHHHHhHhhee-cCCc-cc
Confidence             7788888888765    57788899999999999999999999999      6669999999999998887 2211 00


Q ss_pred             cCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 019022          164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSA  243 (347)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (347)
                      ...       + .. .+..+...|+.++++++++||.|+++.|+..++.+ +.....   ..+.+.+.+.....+.....
T Consensus       143 ~~~-------~-~~-~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~  209 (295)
T PRK11689        143 SLA-------E-LI-NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSPQPAMV  209 (295)
T ss_pred             hhh-------h-hh-hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhcCcccc
Confidence            000       0 00 01112346999999999999999999999877665 655432   22333333333333221111


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhh
Q 019022          244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  323 (347)
Q Consensus       244 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~  323 (347)
                      +   +...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++.
T Consensus       210 ~---~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        210 F---SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             C---CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            1   3346777778775 88999999999999999999999999999999999999999999999999999999998877


Q ss_pred             hccCc
Q 019022          324 LWGKA  328 (347)
Q Consensus       324 ~~~~~  328 (347)
                      ...++
T Consensus       286 ~~~~~  290 (295)
T PRK11689        286 WLATR  290 (295)
T ss_pred             hhhHh
Confidence            65443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=8.8e-32  Score=244.26  Aligned_cols=283  Identities=14%  Similarity=0.048  Sum_probs=226.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (347)
                      .++.++...+++++++|+.+..+.|.+. ++++|.++.++|+.++.++++++ ... ++     ++.++++++..+..|.
T Consensus         8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~-~~~-~~-----~~~~~~~~~~~~~~g~   79 (293)
T PRK10532          8 LPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAI-FKP-WR-----LRFAKEQRLPLLFYGV   79 (293)
T ss_pred             cccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHH-HhH-Hh-----ccCCHHHHHHHHHHHH
Confidence            4568899999999999999999999997 47999999999999999888877 432 22     2235677888888998


Q ss_pred             HHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCC
Q 019022           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (347)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~  166 (347)
                      +....+.+++++++|++++.++++..+.|+++.+++.    |+.      +  +..++.++++|+.++. ..+..     
T Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~------~--~~~~~~i~~~Gv~li~-~~~~~-----  141 (293)
T PRK10532         80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP------V--DFVWVVLAVLGLWFLL-PLGQD-----  141 (293)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh------H--HHHHHHHHHHHHheee-ecCCC-----
Confidence            8888888999999999999999999999999998863    433      2  3456778899988776 22210     


Q ss_pred             CCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 019022          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRL  246 (347)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (347)
                                   ..+....|+.++++++++||.|.+..|+..++.+ +.... +...++++.+.+.....+.. ..+  
T Consensus       142 -------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~--  203 (293)
T PRK10532        142 -------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGE-ALW--  203 (293)
T ss_pred             -------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCc-ccC--
Confidence                         1122346999999999999999999999987766 65554 45566677777766554321 111  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhcc
Q 019022          247 KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  326 (347)
Q Consensus       247 ~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  326 (347)
                       +...|...+++|+++++++|.+|++++++.++++++.+.++||+++.+++++++||+++..+++|+++|++|.+...+.
T Consensus       204 -~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        204 -HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence             2235666789999999999999999999999999999999999999999999999999999999999999999888776


Q ss_pred             CcccccCC
Q 019022          327 KANDEAGK  334 (347)
Q Consensus       327 ~~~~~~~~  334 (347)
                      .+++.|.+
T Consensus       283 ~~~~~~~~  290 (293)
T PRK10532        283 IRREPKIK  290 (293)
T ss_pred             CCCCCCCC
Confidence            65554443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=1.6e-30  Score=236.43  Aligned_cols=277  Identities=13%  Similarity=0.036  Sum_probs=205.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCC-C-CCchhHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASL-P-LFKFPVISRICFL   84 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~   84 (347)
                      +++.++.+.+++++++||.+++..|..  ++++|.++.++|+.++.++++++ ...+++ ++.. + ..+++.+.... .
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-~   78 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVL-MSICRQ-WSYLKTLIQTPQKIFMLA-V   78 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH-HHHHcc-HHHHHHHHcCHHHHHHHH-H
Confidence            467789999999999999999999986  47999999999999999888777 554221 0110 0 11233333333 5


Q ss_pred             HHHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccc
Q 019022           85 SLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM  163 (347)
Q Consensus        85 g~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~  163 (347)
                      +.++ +.++.++++|++++++++++++.++.|+++.+++++++|||+      +++++.|++++++|+.++.. .+    
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~------~~~~~~g~~l~~~Gv~li~~-~~----  147 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF------RRMQWLAVILAICGVLVQLW-TF----  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC------cHHHHHHHHHHHHHHHHHHH-Hc----
Confidence            5555 889999999999999999999999999999999999999999      66699999999999998861 10    


Q ss_pred             cCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhcccccc
Q 019022          164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLS  242 (347)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (347)
                                       ++.    ..++++++++||.|++..|+..++.. +....+.+...++.....+..   +....
T Consensus       148 -----------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  203 (296)
T PRK15430        148 -----------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS  203 (296)
T ss_pred             -----------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc
Confidence                             010    14688899999999999988753221 123334444444443322221   11111


Q ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhh
Q 019022          243 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       243 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l  322 (347)
                      .+...+...+..+...++ ++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+
T Consensus       204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            111111112333444454 7889999999999999999999999999999999999999999999999999999888666


Q ss_pred             hh
Q 019022          323 VL  324 (347)
Q Consensus       323 ~~  324 (347)
                      ..
T Consensus       283 ~~  284 (296)
T PRK15430        283 FV  284 (296)
T ss_pred             HH
Confidence            54

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=2.2e-30  Score=231.44  Aligned_cols=257  Identities=17%  Similarity=0.223  Sum_probs=217.7

Q ss_pred             HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHhhhhc
Q 019022           23 IVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAY  101 (347)
Q Consensus        23 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~  101 (347)
                      ||.+++..|..++++.|+....+.|...+.+++.++ ...     +    .+++++......|.++ ..++.+++.|++|
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~-~~~-----~----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL-LRR-----R----PPLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHh-----c----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999998767999999999999888887776 432     1    2345666777888777 9999999999999


Q ss_pred             cChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCC
Q 019022          102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTR  181 (347)
Q Consensus       102 ~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~  181 (347)
                      +++++++++.++.|+++.+++.+++|||+      +++++.|++++++|+.++. ..++                    .
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~------~~~~~~gi~i~~~Gv~li~-~~~~--------------------~  123 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERP------RKLVLLAAVLGLAGAVLLL-SDGN--------------------L  123 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHhhc-cCCc--------------------c
Confidence            99999999999999999999999999999      6669999999999998876 2211                    1


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHH
Q 019022          182 SRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAF  260 (347)
Q Consensus       182 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~  260 (347)
                      +....|+.++++++++|+.+.+..|+..++.+ ++.....+.+..+.+.+.+.....+... ..   +...|..+++.++
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~  199 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGL  199 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHH
Confidence            23467999999999999999999999987765 2345555778888888888876654322 11   3457888999999


Q ss_pred             HHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhh
Q 019022          261 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF  320 (347)
Q Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~  320 (347)
                      +++++++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999885

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.98  E-value=3.2e-30  Score=235.32  Aligned_cols=288  Identities=15%  Similarity=0.076  Sum_probs=223.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 019022           13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR   92 (347)
Q Consensus        13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   92 (347)
                      ....+...++-....+.+|.++++...|...+++|+..+.+...+. .....+  ++ ++.++++++..+..|++++.++
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~~~~~~~~g~~~~~~~   79 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLP--KR-LKISSALLKLLLPVAIVHTIGH   79 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCHHHHHHHHHHHHHHHHHH
Confidence            3445555666666667899998644779999999999887765544 221112  23 4467889999999999998889


Q ss_pred             HHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCccc
Q 019022           93 ILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQS  172 (347)
Q Consensus        93 ~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~  172 (347)
                      .+.+.|++|++++.++++.++.|+++++++++++|||+      +++++.|+++++.|+.+..  .++            
T Consensus        80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~------~~~~~~~l~l~~~Gv~l~~--~~~------------  139 (302)
T TIGR00817        80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF------PSTLWLSLLPIVGGVALAS--DTE------------  139 (302)
T ss_pred             HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHhhhc--CCc------------
Confidence            99999999999999999999999999999999999999      6669999999999997654  111            


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCchHHHHHHHHHHHHHHHHHHHHhccccc-c--cccc-
Q 019022          173 LHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESNL-S--AWRL-  246 (347)
Q Consensus       173 ~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~-  246 (347)
                              .+....|+.++++++++|+++.+..|+..+  +.+ +.+.+.+++..+++.+.|.....++.. .  .+.. 
T Consensus       140 --------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~  210 (302)
T TIGR00817       140 --------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQA  210 (302)
T ss_pred             --------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHh
Confidence                    122356999999999999999999999887  555 899999999999999999887665421 0  0100 


Q ss_pred             ----cCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhh
Q 019022          247 ----KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       247 ----~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l  322 (347)
                          .....+......+..+....+.++++++++.+|+++++..+++|+++++++++++||+++..+++|+++++.|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l  290 (302)
T TIGR00817       211 ISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL  290 (302)
T ss_pred             hcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence                0011122122333323333345666899999999999999999999999999999999999999999999999999


Q ss_pred             hhccCcccccC
Q 019022          323 VLWGKANDEAG  333 (347)
Q Consensus       323 ~~~~~~~~~~~  333 (347)
                      +.+.|++++++
T Consensus       291 ~~~~k~~~~~~  301 (302)
T TIGR00817       291 YSRVKAQKPKP  301 (302)
T ss_pred             HHHHhccCcCC
Confidence            98776555443

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=1e-26  Score=215.46  Aligned_cols=284  Identities=17%  Similarity=0.121  Sum_probs=224.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCC--chhHHHHHHHHH
Q 019022            9 NGALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF--KFPVISRICFLS   85 (347)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g   85 (347)
                      +.+....++....+-......+|.++ +.++ |..++.+|++++.++...+ .....+  ++ ++.  .+++++.++..|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~--~~-~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLY-WATGFR--KI-PRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCCHHHHHHHHHHHH
Confidence            55666667777777777888899998 4689 9999999999998776554 332112  22 323  345788999999


Q ss_pred             HHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccC
Q 019022           86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST  165 (347)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~  165 (347)
                      +++...+...+.|+++++++.++++.++.|+++++++++++|||+      +++++.++++++.|+.+...  ++     
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~------s~~~~l~l~l~v~Gv~l~~~--~~-----  188 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL------NLYAYLSLIPIVGGVALASV--KE-----  188 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHheec--cc-----
Confidence            999656777889999999999999999999999999999999999      66699999999999999761  11     


Q ss_pred             CCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC------chHHHHHHHHHHHHHHHHHHHHhccc
Q 019022          166 ASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP------AEFVVTLLYCLFATIISAPICFVGES  239 (347)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (347)
                                     .+....|++++++|+++|+++++..|+..++++      ++.+...+....+.++++|+....|.
T Consensus       189 ---------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~  253 (350)
T PTZ00343        189 ---------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG  253 (350)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                           222457999999999999999999999987642      35566777788999999998876653


Q ss_pred             c--ccccc----ccCchhHHHHHHHHHHHHHHHHHHHHH----HhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhh
Q 019022          240 N--LSAWR----LKPDIELASIVYSAFFGLSFITVVHTF----GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGS  309 (347)
Q Consensus       240 ~--~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~----~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~  309 (347)
                      .  ...+.    ......+..+++ .++.+++++.+|+.    ++++++|...++..+++|+++++++++++||++++.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~  332 (350)
T PTZ00343        254 KKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG  332 (350)
T ss_pred             HHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh
Confidence            2  11110    001112233444 45577899999995    9999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHhhhhhhcc
Q 019022          310 VIGGVITCVGFYTVLWG  326 (347)
Q Consensus       310 ~iG~~li~~g~~l~~~~  326 (347)
                      ++|+++++.|++++.+-
T Consensus       333 ~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        333 YLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999998764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.6e-26  Score=209.15  Aligned_cols=289  Identities=19%  Similarity=0.226  Sum_probs=230.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 019022           18 AAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGY   96 (347)
Q Consensus        18 ~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   96 (347)
                      ..+++-..+...+....+.+.+ |...+++-+..-.++..+. ..+ |++.+.+.+..+++|+++++.+++...++.+.+
T Consensus        20 ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~-~~~-r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v   97 (334)
T PF06027_consen   20 VLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPI-LLY-RRGFKKWLKVLKRPWWKYFLLALLDVEANYLVV   97 (334)
T ss_pred             HHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhh-hhh-ccccccchhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            3456667777777777555666 8888888887777777776 555 332223233455678889999999999999999


Q ss_pred             hhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCC
Q 019022           97 TGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWT  176 (347)
Q Consensus        97 ~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~  176 (347)
                      .|++|++.+.++++..+..+++++++++++|||.      ++.+++|+++++.|++++...+...             .+
T Consensus        98 ~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry------~~~~~~gv~i~i~Gv~lv~~sD~~~-------------~~  158 (334)
T PF06027_consen   98 LAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRY------SWFHILGVLICIAGVVLVVVSDVLS-------------GS  158 (334)
T ss_pred             HHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhh------hHHHHHHHHHHHhhhhheeeecccc-------------cc
Confidence            9999999999999999999999999999999998      6669999999999999887322211             11


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccc-ccccccCchhHHHH
Q 019022          177 PQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL-SAWRLKPDIELASI  255 (347)
Q Consensus       177 ~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  255 (347)
                      ++.+.++..+||+++++|+++||+++++.++..++.+ ..++..+..+++.++..+...+.|... ....  ++......
T Consensus       159 ~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~--w~~~~~~~  235 (334)
T PF06027_consen  159 DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH--WTSQVIGL  235 (334)
T ss_pred             cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC--CChhhHHH
Confidence            1234567789999999999999999999999999887 889999999999999999988887542 1111  23333334


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCccc
Q 019022          256 VYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  330 (347)
Q Consensus       256 l~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~  330 (347)
                      .....++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.+++...+++.
T Consensus       236 ~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  236 LVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            444444666778888888999999999999999999999999999999999999999999999999988755443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.1e-26  Score=209.72  Aligned_cols=274  Identities=12%  Similarity=0.058  Sum_probs=201.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019022           13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGSFF   91 (347)
Q Consensus        13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (347)
                      .+..++++++|+...+..|... +.-++  +.+++.....+.++++ ...+ ++  ..++..+++.+......++.+..+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPY-GLWYLAQ--VGWSRLPATFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHH-HHHhccc--CCCCCcchhhHHHHHHHHHHHHHH
Confidence            4567889999999999999774 34344  3577777777777777 5542 12  221333344444455555555999


Q ss_pred             HHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcc
Q 019022           92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ  171 (347)
Q Consensus        92 ~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~  171 (347)
                      +.+++.|++++++++++.+.++.|+++.+++++++|||+      +++++.|+.+++.|+.++.. ++.           
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~------~~~~~~g~~~~~~Gv~ll~~-~~~-----------  138 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETL------SPLAWLGILIITLGLLVLGL-SRF-----------  138 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHhc-ccc-----------
Confidence            999999999999999999999999999999999999998      66699999999999988762 111           


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchH---HHHHHHHHHHHHHHHHHHHhcccccccccccC
Q 019022          172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEF---VVTLLYCLFATIISAPICFVGESNLSAWRLKP  248 (347)
Q Consensus       172 ~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (347)
                               ......|+.++++++++|+.|.+..|+..++.++..   ....+.....++...+.....+...  +. .+
T Consensus       139 ---------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~  206 (281)
T TIGR03340       139 ---------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PY  206 (281)
T ss_pred             ---------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hh
Confidence                     011235888999999999999999887654443111   2222222222122222221111111  11 12


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhh
Q 019022          249 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       249 ~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l  322 (347)
                      +..+...++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+.+++.|+++
T Consensus       207 ~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       207 ARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            23456677888889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=2.8e-25  Score=197.97  Aligned_cols=250  Identities=12%  Similarity=0.004  Sum_probs=183.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCC---CCCCCCchhH-HHHHHHHHH
Q 019022           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT---ASLPLFKFPV-ISRICFLSL   86 (347)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~   86 (347)
                      |+++.+++++++||.++++.|..  ++++|.+++++|+.++.++++++ ...+++.+   ++.++.++++ +......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLS-VTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHH-HHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            58899999999999999999985  46999999999999999888776 54322100   0101112222 445677787


Q ss_pred             HHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCC
Q 019022           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA  166 (347)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~  166 (347)
                      +.+.++.+++.|++++++++++++.++.|+++++++++++|||+      +++++.++++++.|+.++.. .+       
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~------~~~~~l~~~~~~~Gv~li~~-~~-------  144 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERI------SRFQFIAVIIATLGVISNIV-LK-------  144 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHHH-Hc-------
Confidence            78999999999999999999999999999999999999999999      66699999999999988762 10       


Q ss_pred             CCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 019022          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRL  246 (347)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (347)
                                    ++.    ..++++++++|+.|.+..|+..++ + ........ ........+.....+.... ...
T Consensus       145 --------------~~~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~  202 (256)
T TIGR00688       145 --------------GSL----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLET-LSLMPVAIYYLLQTDFATV-QQT  202 (256)
T ss_pred             --------------CCc----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHHH-HHHHHHHHHHHHHhccCcc-ccc
Confidence                          000    135788999999999999987543 3 22222111 1111111111111111110 111


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHH
Q 019022          247 KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  300 (347)
Q Consensus       247 ~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~  300 (347)
                      .+...|..+.+.|+. +.++|.++++++|+.++++++.+.++||+++.++++++
T Consensus       203 ~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       203 NPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             CchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            122478888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.93  E-value=7.2e-24  Score=178.07  Aligned_cols=277  Identities=16%  Similarity=0.068  Sum_probs=233.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (347)
                      +++.++.+++..-....+.|..+ ..++|...+.+|..++++.++++   ++ .  .+ ++.++++++.....|+.....
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l---~R-P--wr-~r~~~~~~~~~~~yGvsLg~M   84 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLAL---FR-P--WR-RRLSKPQRLALLAYGVSLGGM   84 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHH---hh-H--HH-hccChhhhHHHHHHHHHHHHH
Confidence            68888888888888888999998 68999999999999999988877   42 2  12 456788999999999999999


Q ss_pred             HHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcc
Q 019022           92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ  171 (347)
Q Consensus        92 ~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~  171 (347)
                      |.+||.+++.++.+.+..+-.+.|+.+..++-         |   +.++...+.+++.|..++. ..++           
T Consensus        85 Nl~FY~si~riPlGiAVAiEF~GPL~vA~~~s---------R---r~~d~vwvaLAvlGi~lL~-p~~~-----------  140 (292)
T COG5006          85 NLLFYLSIERIPLGIAVAIEFTGPLAVALLSS---------R---RLRDFVWVALAVLGIWLLL-PLGQ-----------  140 (292)
T ss_pred             HHHHHHHHHhccchhhhhhhhccHHHHHHHhc---------c---chhhHHHHHHHHHHHHhhe-eccC-----------
Confidence            99999999999999999999999999888752         2   4558889999999998887 2222           


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchh
Q 019022          172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIE  251 (347)
Q Consensus       172 ~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (347)
                             +..+.+..|..+++.++.||++|.+..+|..+..+ ..+-....+..++++.+|+.....++.. +   .+.-
T Consensus       141 -------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~l-~---~p~l  208 (292)
T COG5006         141 -------SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPAL-F---SPSL  208 (292)
T ss_pred             -------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchhh-c---ChHH
Confidence                   22455578999999999999999999999987666 7888889999999999999875543211 1   3335


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCcccc
Q 019022          252 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  331 (347)
Q Consensus       252 ~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~  331 (347)
                      ...-+..+++++++.|.+-..+++|.+....+.+..+||.++.+.|++++||++|+.||+|...|+.+..-..+..+|+.
T Consensus       209 l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         209 LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            56667889999999999999999999999999999999999999999999999999999999999998776655544444


Q ss_pred             c
Q 019022          332 A  332 (347)
Q Consensus       332 ~  332 (347)
                      .
T Consensus       289 ~  289 (292)
T COG5006         289 V  289 (292)
T ss_pred             C
Confidence            3

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=4.2e-23  Score=186.94  Aligned_cols=283  Identities=21%  Similarity=0.266  Sum_probs=214.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (347)
                      ++........+...+.|+.+....|.......++....+.|...+.+...+. ....+.  .+ ++..++ ++...+.+.
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~-~~~~~~~~~   77 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPL-LLLEPR--GL-RPALRP-WLLLLLLAL   77 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHH-HHhhcc--cc-cccccc-hHHHHHHHH
Confidence            3455677888888899999999999996323677777777999988884444 221111  12 211222 344555555


Q ss_pred             HH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHH-HhhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc
Q 019022           87 VG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI-IFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (347)
Q Consensus        87 ~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~-~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~  164 (347)
                      ++ ..++.+++.++++++++.++++.++.|+++.+++. +++|||+      +++++.++.+++.|++++.. .+.. . 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~Gv~lv~~-~~~~-~-  148 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL------SLLQILGILLALAGVLLILL-GGGG-G-  148 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHheec-CCCc-c-
Confidence            55 99999999999999999999999999999999997 7779999      66699999999999999882 1110 0 


Q ss_pred             CCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHH-HHHHHHHHHHHHHHHhccccccc
Q 019022          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTL-LYCLFATIISAPICFVGESNLSA  243 (347)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  243 (347)
                                     ... ...|+.+++.++++|+++.+..|+.. +.+ +..... +..........+. ...+.+   
T Consensus       149 ---------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~---  206 (292)
T COG0697         149 ---------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLF-FLSGFG---  206 (292)
T ss_pred             ---------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHH-Hhcccc---
Confidence                           011 56899999999999999999999987 544 555444 3333222222221 111111   


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhh
Q 019022          244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  323 (347)
Q Consensus       244 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~  323 (347)
                       .......+....+.|++++++++.+|++++++.++..++.+.+++|+++.+++++++||+++..+++|+++++.|+.+.
T Consensus       207 -~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~  285 (292)
T COG0697         207 -APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLA  285 (292)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence             1113457888999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hcc
Q 019022          324 LWG  326 (347)
Q Consensus       324 ~~~  326 (347)
                      ..+
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            766

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.91  E-value=2.7e-22  Score=173.16  Aligned_cols=281  Identities=10%  Similarity=0.025  Sum_probs=224.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCC--CCCchhHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASL--PLFKFPVISRICFL   84 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   84 (347)
                      .+..+|++..+.+.++||..+...|..  ++.++.++...|...+.++++.. ....|+. +..  -..+++.+..+.+.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~l-l~~~r~~-~~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLAL-LFLLRQW-RELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHH-HHHHhhh-HHHHHHHhCcHHHHHHHHH
Confidence            345789999999999999999999999  68999999999999999988877 4433321 111  12355667778888


Q ss_pred             HHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc
Q 019022           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (347)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~  164 (347)
                      +.+...++..+.+|.+....-++++-++.+|++.++++.+++|||+      ++.|+++++++.+||.......|+.   
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl------s~~Q~iAV~lA~~GV~~~~~~~g~l---  149 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL------SRLQWIAVGLAAAGVLIQTWLLGSL---  149 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHcCCC---
Confidence            8888999999999999999999999999999999999999999999      7789999999999999887433321   


Q ss_pred             CCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 019022          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAW  244 (347)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (347)
                                         .    ..++.-+++|+.|...-|+.  +. |+.+-....+..-....+.+.+..+...+..
T Consensus       150 -------------------p----wval~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~  203 (293)
T COG2962         150 -------------------P----WVALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFL  203 (293)
T ss_pred             -------------------c----HHHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhh
Confidence                               1    24445566788887765543  33 3667677777666666666665554433211


Q ss_pred             cccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          245 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       245 ~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ...+...+..+...|. .++++..++..+-++++-+..+.+++.+|..-.+++.+++||+++..+++..+.|..|+.++.
T Consensus       204 ~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~  282 (293)
T COG2962         204 QQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFS  282 (293)
T ss_pred             hcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            1124456767777777 788999999999999999999999999999999999999999999999999999999998877


Q ss_pred             ccC
Q 019022          325 WGK  327 (347)
Q Consensus       325 ~~~  327 (347)
                      ...
T Consensus       283 ~d~  285 (293)
T COG2962         283 IDG  285 (293)
T ss_pred             HHH
Confidence            643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=8e-21  Score=171.77  Aligned_cols=274  Identities=13%  Similarity=0.080  Sum_probs=204.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (347)
                      +.+..++++++||.+++..|.. . +.++.++.  |..++.+++..+ ....|+  ++ + ..++.+..-++.|.+...+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~-~~~~~~--~~-~-~~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIA-IAIFVL--PE-F-WALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHH-HHHHhC--Cc-c-cccHHHHHHHHHHHHHHhh
Confidence            4678899999999999999998 3 78887765  777777776665 443233  22 1 1244555566677777889


Q ss_pred             HHHHHhhhhccChhhHHHHhh-hhHHHHHHHHHHhhhccccccccCccee----eehhhhhhhhhhhhhhccCcccccCC
Q 019022           92 RILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAK----IIGTLVSVSGAMLVVLYKGPTIMSTA  166 (347)
Q Consensus        92 ~~~~~~al~~~~~~~~~~l~~-~~pi~~~i~a~~~~~e~~~~~~~~~~~~----~~gi~l~~~Gv~li~~~~g~~~~~~~  166 (347)
                      +.+++.++++++.+.+..+.+ ++++++.+.+.+++|||.      ++++    +.|+++++.|++++.. .++....  
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~------t~~~~~~~~~g~~l~l~G~~l~~~-~~~~~~~--  143 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWS------TSIQTLLGLLALILIIIGVYLTSR-SKDKSAG--  143 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhcc------chHHHHHHHHHHHHHHHhHheEEe-ccccccc--
Confidence            999999999999999999988 899999999999999988      5557    9999999999888762 2110000  


Q ss_pred             CCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHH---HHHHHHHHHHHHHhccccccc
Q 019022          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLY---CLFATIISAPICFVGESNLSA  243 (347)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  243 (347)
                                 ..+..+..+|..+++.++++|+.|.+..|..  +++ +.+..+.+   .+.++....+.. . ..  .+
T Consensus       144 -----------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~-~-~~--~~  205 (290)
T TIGR00776       144 -----------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH-I-LA--KP  205 (290)
T ss_pred             -----------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH-h-cc--cc
Confidence                       0001334679999999999999999999976  354 66663333   333333333322 1 11  11


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHhc-cCCceeehhhhhHHHHHHHHHHHHHhcCccchhhh----hhHHHHHH
Q 019022          244 WRLKPDIELASIVYSAFFGLSFITVVHTFGLR-MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCV  318 (347)
Q Consensus       244 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~-~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~----iG~~li~~  318 (347)
                      +  .++..+..++ .|++ ..+++.+|..+.+ +.+++.++.+...||+.+.+++++++||..++.++    +|+++++.
T Consensus       206 ~--~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~  281 (290)
T TIGR00776       206 L--KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIII  281 (290)
T ss_pred             h--HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHH
Confidence            1  1223444444 8886 6899999999999 99999999999999999999999999999999999    99999999


Q ss_pred             hhhhhhc
Q 019022          319 GFYTVLW  325 (347)
Q Consensus       319 g~~l~~~  325 (347)
                      |+.+...
T Consensus       282 ~~~l~~~  288 (290)
T TIGR00776       282 AANILGI  288 (290)
T ss_pred             HHHHHhc
Confidence            9877543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=4.4e-24  Score=180.44  Aligned_cols=290  Identities=16%  Similarity=0.110  Sum_probs=217.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 019022           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (347)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (347)
                      .++.....+. ..+.+..++++..+  ..+|.+..-.|.++-.+...|. ..+++.  ..  ..++.+...++++|+.|.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pc-liy~~~--~v--~gp~g~R~~LiLRg~mG~  108 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPC-LIYYMQ--PV--IGPEGKRKWLILRGFMGF  108 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheE-EEEEee--ee--ecCCCcEEEEEeehhhhh
Confidence            3455555555 44555555555553  6899999999988888888777 555333  11  123344456899999998


Q ss_pred             HHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCC
Q 019022           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP  169 (347)
Q Consensus        90 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~  169 (347)
                      .+....|+++.|.+.++++++..++|+++.++++.++|||.      ++...++.++.+.||+++.  ..++....+   
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~------t~~eaL~s~itl~GVVLIv--RPpFlFG~~---  177 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF------TKFEALGSLITLLGVVLIV--RPPFLFGDT---  177 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC------cHHHHHHHHHhhheEEEEe--cCCcccCCC---
Confidence            88999999999999999999999999999999999999999      7889999999999999987  333322110   


Q ss_pred             cccCCCCCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccccccccc-
Q 019022          170 AQSLHWTPQST-RSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK-  247 (347)
Q Consensus       170 ~~~~~~~~~~~-~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  247 (347)
                          .++++++ ......|...++.+.++-|..+++.|+..|+.+ ......+....+.+...+....-+.    +..+ 
T Consensus       178 ----t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~----~~lP~  248 (346)
T KOG4510|consen  178 ----TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGA----VQLPH  248 (346)
T ss_pred             ----ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccc----eecCc
Confidence                0011111 233456788889999999999999999988887 4444444455555555554433321    2211 


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          248 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       248 ~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      ...+|..+..+|+ .+.+++++...++++-.+..+++..+...++|.+++.+++||.|+.+.|.|+++++.+.+.....|
T Consensus       249 cgkdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  249 CGKDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             cccceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            3347777888888 556899999999999999999999999999999999999999999999999999999977765544


Q ss_pred             c
Q 019022          328 A  328 (347)
Q Consensus       328 ~  328 (347)
                      .
T Consensus       328 w  328 (346)
T KOG4510|consen  328 W  328 (346)
T ss_pred             H
Confidence            3

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=1.3e-18  Score=158.80  Aligned_cols=281  Identities=17%  Similarity=0.176  Sum_probs=216.2

Q ss_pred             HHHHHHHHHh-CCCC--hhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 019022           26 ENIIFKLATS-KGMS--YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYS  102 (347)
Q Consensus        26 ~~~~~k~~~~-~~~~--p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~  102 (347)
                      +.+.-+.... ++..  |..+++..+....+...+. ....++     ++.++..++.+...+++......+-+.+++|+
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFIL-LSLFKF-----PKSRKIPLKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHH-HHhccc-----cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3344444432 2344  8888999888888777766 433221     22345557788899999999999999999999


Q ss_pred             ChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCCc
Q 019022          103 SPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRS  182 (347)
Q Consensus       103 ~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~  182 (347)
                      +.+..+++..+.|+++++++.+++|+|.      +++++.++++..+|+.+..+.+....+.            ++....
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y------~~~~~~~v~li~~Gv~~~~~~~~~~~~~------------~~~~~~  150 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRY------SRRQYLSVLLITIGVAIFTLSDSSSSSS------------SNSSSF  150 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccc------cHHHHHHHHHHHhhHheeeecccccccc------------cccccc
Confidence            9999999999999999999999999988      6679999999999999987432221111            112223


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHh--ccccccccc--ccCchhHHHHHH
Q 019022          183 RWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFV--GESNLSAWR--LKPDIELASIVY  257 (347)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~ll~  257 (347)
                      ++..|+.+.+.+.++.|...+.+++..++++ ++.+.+++...++.+...+....  .++..+..+  ...+ .....+.
T Consensus       151 ~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p-~~~~~l~  229 (303)
T PF08449_consen  151 SSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHP-SVLLYLL  229 (303)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhH-HHHHHHH
Confidence            3344999999999999999999999998776 57899999999999988888777  332111111  1112 2333334


Q ss_pred             HHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCcccc
Q 019022          258 SAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  331 (347)
Q Consensus       258 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~  331 (347)
                      .-.+++.++..+.+...++.++...+++..+.-+++++++.+++|+++++.+|+|.++++.|..++...|+|++
T Consensus       230 ~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  230 LFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            44447778888888999999999999999999999999999999999999999999999999999988776653

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=1.9e-19  Score=159.68  Aligned_cols=232  Identities=19%  Similarity=0.294  Sum_probs=193.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcc
Q 019022           82 CFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT  161 (347)
Q Consensus        82 ~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~  161 (347)
                      +....+...+++.+..|+.|++++..+++..++-+|+.+++.++..||+      ++.|++++.+++.|++++...+.. 
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f------t~sKllav~~si~GViiVt~~~s~-  235 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF------TLSKLLAVFVSIAGVIIVTMGDSK-  235 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh------hHHHHHHHHHhhccEEEEEecccc-
Confidence            3333444999999999999999999999999999999999999999999      667999999999999998843222 


Q ss_pred             cccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---chHHHHHHHHHHHHHHHHHHHHhcc
Q 019022          162 IMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGE  238 (347)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  238 (347)
                                   +.+.........|+++++++++.||.|.++.|+...+.+   |...+..+..++..+.++|..++-+
T Consensus       236 -------------~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~  302 (416)
T KOG2765|consen  236 -------------QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD  302 (416)
T ss_pred             -------------ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence                         112234556688999999999999999999999886652   5667888888888888887766543


Q ss_pred             c-ccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHH
Q 019022          239 S-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITC  317 (347)
Q Consensus       239 ~-~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~  317 (347)
                      . ..+.+..+.......+++.++++++++-++|.++.-..+|..++.-+.++.+.+++.+.++-|..+++.+++|.+.|+
T Consensus       303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If  382 (416)
T KOG2765|consen  303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF  382 (416)
T ss_pred             HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            2 223334445557777889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhccCcccccC
Q 019022          318 VGFYTVLWGKANDEAG  333 (347)
Q Consensus       318 ~g~~l~~~~~~~~~~~  333 (347)
                      +|.+.++...+...+.
T Consensus       383 v~Fv~vn~~~~~~~~~  398 (416)
T KOG2765|consen  383 VGFVIVNISSENSKKD  398 (416)
T ss_pred             HHHhheeccccccccc
Confidence            9999988766544443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.79  E-value=3e-18  Score=153.46  Aligned_cols=289  Identities=14%  Similarity=0.133  Sum_probs=225.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--CCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATS--KGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (347)
                      ..++.....++-......+|..++  +.--|..++..+...+.+..+.. ....-.  +..+..++.++...+..|++.+
T Consensus        18 ~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~--~~~~~~~~~~~~~llpl~~~~~   94 (316)
T KOG1441|consen   18 IGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLV--PPSKISSKLPLRTLLPLGLVFC   94 (316)
T ss_pred             HHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCC--CCCccccccchHHHHHHHHHHH
Confidence            333344444444555666799986  44668888888887777777766 444311  2212235577899999999999


Q ss_pred             HHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCC
Q 019022           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP  169 (347)
Q Consensus        90 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~  169 (347)
                      .+..+-+.+++|.+++..+.+..++|++++++++++.+|+.      +...+..++....|+.+...  ++         
T Consensus        95 ~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~------s~~~~lsL~piv~GV~ias~--~e---------  157 (316)
T KOG1441|consen   95 ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTY------SSMTYLSLLPIVFGVAIASV--TE---------  157 (316)
T ss_pred             HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCC------cceEEEEEEEeeeeEEEeee--cc---------
Confidence            99999999999999999999999999999999999999988      55688999999999988762  22         


Q ss_pred             cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh--hCC-chHHHHHHHHHHHHHHHH-HHHHhcccccc---
Q 019022          170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMK--LYP-AEFVVTLLYCLFATIISA-PICFVGESNLS---  242 (347)
Q Consensus       170 ~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---  242 (347)
                                 .+-...|...++++.+..++.+++.++..+  +.+ ++.+...++...+...++ |+....+++..   
T Consensus       158 -----------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~  226 (316)
T KOG1441|consen  158 -----------LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGF  226 (316)
T ss_pred             -----------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeee
Confidence                       334467999999999999999999999995  333 799999999999999999 77766665432   


Q ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhh
Q 019022          243 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       243 ~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l  322 (347)
                      .. ..++......++.. ++...-+..-+..+.+++|...++.+...-++.++.++++++|+.++.+..|..+.+.|+++
T Consensus       227 ~~-~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~  304 (316)
T KOG1441|consen  227 LT-APWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL  304 (316)
T ss_pred             ec-cccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence            11 01222333444444 35555566677789999999999999999999999999999999999999999999999999


Q ss_pred             hhccCcccccC
Q 019022          323 VLWGKANDEAG  333 (347)
Q Consensus       323 ~~~~~~~~~~~  333 (347)
                      +.+.|.+++++
T Consensus       305 Y~~~k~~~~~~  315 (316)
T KOG1441|consen  305 YSRAKLKEKKG  315 (316)
T ss_pred             HHHHhhhhhcc
Confidence            99888766654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.64  E-value=1.4e-14  Score=120.87  Aligned_cols=231  Identities=15%  Similarity=0.124  Sum_probs=185.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhh
Q 019022           75 FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (347)
Q Consensus        75 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  154 (347)
                      +...+.+...+.-..+.....+.|++|++=....+-.++-|+-+++++.++.+.+.      +|++...++..++|+.+.
T Consensus        82 ~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY------~w~kY~cVL~IV~GValF  155 (337)
T KOG1580|consen   82 NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSY------HWRKYCCVLMIVVGVALF  155 (337)
T ss_pred             CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccc------cHHHHHHHHHHHHHHHHh
Confidence            33345566666666777788889999999888888999999999999999987766      667999999999999998


Q ss_pred             hhcc-CcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHH
Q 019022          155 VLYK-GPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAP  232 (347)
Q Consensus       155 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  232 (347)
                      . +. +..+.               ..+.+...|.++.++|-...++....+.+..+.+. ....++++..+.+.+.+..
T Consensus       156 m-YK~~Kv~g---------------~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~  219 (337)
T KOG1580|consen  156 M-YKENKVGG---------------AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGA  219 (337)
T ss_pred             h-ccccccCC---------------CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhh
Confidence            8 44 33222               34667789999999999999999999999887764 4668888888888888777


Q ss_pred             HHHhccccccc--ccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhh
Q 019022          233 ICFVGESNLSA--WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV  310 (347)
Q Consensus       233 ~~~~~~~~~~~--~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~  310 (347)
                      -..++++..+.  +....+..|.-+..+++ ++++++.+.+..+...+|..-+++....-+++++.+.++++.+++.+||
T Consensus       220 g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQw  298 (337)
T KOG1580|consen  220 GLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQW  298 (337)
T ss_pred             hheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHH
Confidence            65555442221  11223345556667776 8999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhhhh-hccCc
Q 019022          311 IGGVITCVGFYTV-LWGKA  328 (347)
Q Consensus       311 iG~~li~~g~~l~-~~~~~  328 (347)
                      +|.++++.+...= ..+|+
T Consensus       299 lgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  299 LGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             HHHHHHHHHhhhHhhcCCc
Confidence            9999999997774 33443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.63  E-value=8.8e-16  Score=129.57  Aligned_cols=269  Identities=16%  Similarity=0.113  Sum_probs=207.6

Q ss_pred             HHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhc
Q 019022           23 IVGENIIFKLATSKGM-SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAY  101 (347)
Q Consensus        23 ~~~~~~~~k~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~  101 (347)
                      -+........+ .+++ .|...+|..+..-+++..++ +.+ |+  +.    -+..|+.++++++..+-++++...|.+|
T Consensus        31 t~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~-~~f-R~--~~----~~~~~~hYilla~~DVEaNy~vV~AyQy  101 (336)
T KOG2766|consen   31 TSTAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPI-MLF-RR--KY----IKAKWRHYILLAFVDVEANYFVVKAYQY  101 (336)
T ss_pred             HcchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhH-HHh-hh--HH----HHHHHHHhhheeEEeecccEEEeeehhh
Confidence            33333333444 3433 47778999999999999999 777 43  22    2445778999999998899999999999


Q ss_pred             cChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCC
Q 019022          102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTR  181 (347)
Q Consensus       102 ~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~  181 (347)
                      ++...++++---...-+.+++|+++|.|-      ++.++.|+++++.|++++++ ++-             |+++.+++
T Consensus       102 TsmtSi~lLDcwaip~v~~lsw~fLktrY------rlmki~gV~iCi~GvvmvV~-sDV-------------~agd~agg  161 (336)
T KOG2766|consen  102 TSMTSIMLLDCWAIPCVLVLSWFFLKTRY------RLMKISGVVICIVGVVMVVF-SDV-------------HAGDRAGG  161 (336)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHHHHHHHH------hhheeeeEEeEecceEEEEE-eee-------------ccccccCC
Confidence            99999999988888899999999999977      56699999999999999883 221             22445667


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccc-ccccccccCchhHHHHHHHHH
Q 019022          182 SRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGES-NLSAWRLKPDIELASIVYSAF  260 (347)
Q Consensus       182 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~g~  260 (347)
                      .+-.+|+.+.++++-+||..++....+.|+.+ ..+.+....++|+++..+. .+++. +.....  ++......+. ..
T Consensus       162 snp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~--w~~~i~~yl~-f~  236 (336)
T KOG2766|consen  162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHVSTLH--WDSAIFLYLR-FA  236 (336)
T ss_pred             CCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-HhhhccceeeEe--ehHHHHHHHH-HH
Confidence            77889999999999999999999999988887 9999999999999999998 44443 221111  2222222222 33


Q ss_pred             HHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          261 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      ++..+-|.+.-..+|..+++..+.-..+.-.++.+.  -.+|-+.++...+..+.+..|.+++..++
T Consensus       237 L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  237 LTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             HHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence            455556666667788999999999888999999888  56788899999999999999998885443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.57  E-value=2.1e-14  Score=108.68  Aligned_cols=136  Identities=15%  Similarity=0.129  Sum_probs=119.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHH
Q 019022           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSF   90 (347)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (347)
                      ...++.++++++|+...++.|..+ +++||...++.|..+...++..+ ++..++ ++..-..++|.|..+.+.|+.++.
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v-~~~~g~-~~~~~~~~~k~~lflilSGla~gl   79 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIV-LLVTGN-WQAGGEIGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHH-HHhcCc-eecccccCcceehhhhHHHHHHHH
Confidence            346778999999999999999997 79999999999999999988888 666422 133223578889999999998999


Q ss_pred             HHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           91 FRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        91 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ++.+||.|++...++.+..+-.++|+++++++++++|||+      +..+++|+++..+|++++.
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~l------s~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERL------SLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCC------CHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999      5569999999999998765

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.56  E-value=1.1e-13  Score=104.82  Aligned_cols=135  Identities=17%  Similarity=0.113  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHH
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  266 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  266 (347)
                      -..+++++++++++..++.|.-.++.+ |...++.........+..+....++. +......+..|..+...|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHH-HHHHH
Confidence            357899999999999999999988887 88888999888888888877766542 1111125567888777775 88899


Q ss_pred             HHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          267 TVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       267 ~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ..+|+++++..+++++.++.-++|+++++++++++||+++..+++|+.+|.+|..++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999999999999987754

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.55  E-value=9.5e-13  Score=115.55  Aligned_cols=230  Identities=13%  Similarity=0.186  Sum_probs=169.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhh
Q 019022           74 KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (347)
Q Consensus        74 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  153 (347)
                      ++++..++.+-+++....+.+.+.++++.+|+..+++.++..+++++++++++|+|+      +++||.++.+.++|+.+
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~l------s~~qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRL------SRRQWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHccc------chhhHHHHHHHHHHHhe
Confidence            456677888888889999999999999999999999999999999999999999999      66699999999999988


Q ss_pred             hhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHH
Q 019022          154 VVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAP  232 (347)
Q Consensus       154 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  232 (347)
                      +-. ++......+    +.+.....+...+...|..+.+.++++.|+..++.++..|+.+ +....+.....++.++.++
T Consensus        87 v~~-~~~~~~~~~----~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~  161 (244)
T PF04142_consen   87 VQL-SSSQSSDNS----SSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL  161 (244)
T ss_pred             eec-CCccccccc----cccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence            762 222111100    0000001123556689999999999999999999999999875 3445666666777777766


Q ss_pred             HHHhccccc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhh
Q 019022          233 ICFVGESNL-SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI  311 (347)
Q Consensus       233 ~~~~~~~~~-~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~i  311 (347)
                      .....+... .+..  .-..+-...+.-++..+++=.+....+|+.+...=+.-...+.+++.+.+++++|.+++....+
T Consensus       162 ~~~~~~~~~~~~~g--~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l  239 (244)
T PF04142_consen  162 ALLLSDGSAISESG--FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL  239 (244)
T ss_pred             HHhcccccccccCC--chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence            654443311 1000  0012222233334445555555666788988888889999999999999999999999999999


Q ss_pred             hHHHH
Q 019022          312 GGVIT  316 (347)
Q Consensus       312 G~~li  316 (347)
                      |..++
T Consensus       240 g~~~V  244 (244)
T PF04142_consen  240 GAALV  244 (244)
T ss_pred             heecC
Confidence            98753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.55  E-value=1.5e-11  Score=109.87  Aligned_cols=301  Identities=12%  Similarity=0.128  Sum_probs=210.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHhhhhhhh-cc-CCCCCC------CCchhHHH
Q 019022           11 ALFTAMVAAECTIVGENIIFKLATSKG---MSYFVFVFYSYAATTLVLLLLFPFIF-RS-NTASLP------LFKFPVIS   79 (347)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~-~~-~~~~~~------~~~~~~~~   79 (347)
                      .-.+.++...+-++...+..|+.-..+   +.|....+.--.+-.++.... .+.. |+ ..+..+      ...+++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFL-LLFEERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence            446667778888999999999996445   556666666665555554444 3332 11 001101      12233455


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccC
Q 019022           80 RICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKG  159 (347)
Q Consensus        80 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g  159 (347)
                      +..+-+++.+..|.+.|.++.+.+++..++.+++-.+.|++++.+++++|+      +++||.++++.++|+.++-....
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL------s~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL------SRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHhccCC
Confidence            666667778888889999999999999999999999999999999999999      66699999999999988752111


Q ss_pred             cccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhcc
Q 019022          160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGE  238 (347)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  238 (347)
                      +..           .+.+.....+...|....+.++...+...++.++.+|+.+ +....+....+++.++.+.-.+..+
T Consensus       168 ~~~-----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d  236 (345)
T KOG2234|consen  168 SPT-----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQD  236 (345)
T ss_pred             CCC-----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            110           1111344667789999999999999999999999998765 3445555666667776666665554


Q ss_pred             cccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHH
Q 019022          239 SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCV  318 (347)
Q Consensus       239 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~  318 (347)
                      .....|.... ..|-...+.-++..+++=.+....+|+.+-..=+....+..+++.+.++.+++-+||....+|..+++.
T Consensus       237 ~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~  315 (345)
T KOG2234|consen  237 GEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVIL  315 (345)
T ss_pred             ccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHH
Confidence            4322121100 122333333334444444455555677776666777778899999999999999999999999999999


Q ss_pred             hhhhhhccCccc
Q 019022          319 GFYTVLWGKAND  330 (347)
Q Consensus       319 g~~l~~~~~~~~  330 (347)
                      ++.++...++++
T Consensus       316 Si~lY~~~P~~~  327 (345)
T KOG2234|consen  316 SIFLYSLYPARD  327 (345)
T ss_pred             HHHHhhcCCccc
Confidence            999999665544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.54  E-value=8e-13  Score=114.87  Aligned_cols=265  Identities=14%  Similarity=0.127  Sum_probs=205.2

Q ss_pred             ChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHH
Q 019022           39 SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFT  118 (347)
Q Consensus        39 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~  118 (347)
                      +|....+...+.+.++-... ... ++  +.  ...++.|+.+...++.+.....|-|.|++|++--...+-..+--+-+
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~-l~~-~k--~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPV  123 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAM-LKW-WK--KE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPV  123 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHH-Hhc-cc--cc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHH
Confidence            46677777777777776544 322 33  22  22445688899999999999999999999999888888899999999


Q ss_pred             HHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHH
Q 019022          119 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLI  198 (347)
Q Consensus       119 ~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~  198 (347)
                      +++..++.|.|.      +..+.....+.-.|+.+..+++.+.+..             .....+...|..+....-++.
T Consensus       124 mlmg~Lvy~~ky------~~~eYl~~~LIs~GvsiF~l~~~s~s~~-------------~~g~~ns~~G~~Ll~~~L~fD  184 (327)
T KOG1581|consen  124 MLMGTLVYGRKY------SSFEYLVAFLISLGVSIFSLFPNSDSSS-------------KSGRENSPIGILLLFGYLLFD  184 (327)
T ss_pred             HHHHHHHhcCcc------CcHHHHHHHHHHhheeeEEEecCCCCcc-------------ccCCCCchHhHHHHHHHHHHH
Confidence            999999999988      4458888888889998887543322111             233466788999999999999


Q ss_pred             HHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhccccccc--ccccCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 019022          199 SVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSA--WRLKPDIELASIVYSAFFGLSFITVVHTFGLR  275 (347)
Q Consensus       199 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~  275 (347)
                      +..+..+.++.+++. .+..++++..++.++.........+.....  +-...+.-+.-++.... |+++++.+.++-++
T Consensus       185 gfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~  263 (327)
T KOG1581|consen  185 GFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIE  263 (327)
T ss_pred             hhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHh
Confidence            999999999998765 688999999999998888875444332111  11112223334444444 77889999999999


Q ss_pred             cCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCcc
Q 019022          276 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  329 (347)
Q Consensus       276 ~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  329 (347)
                      +.++...+.++.+.-.+++.++.+++|.+++..||+|..+++.|+.+-..-+++
T Consensus       264 ~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  264 RFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999987655444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.51  E-value=3.2e-12  Score=111.06  Aligned_cols=254  Identities=17%  Similarity=0.186  Sum_probs=187.3

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhhcc-C-CCCCCCCchh-HHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHH
Q 019022           40 YFVFVFYSYAATTLVLLLLFPFIFRS-N-TASLPLFKFP-VISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPG  116 (347)
Q Consensus        40 p~~~~~~r~~~~~l~l~~~~~~~~~~-~-~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi  116 (347)
                      |...+.++.++-.++.... -..+++ . +.+ ...+++ +.++....|++.++...+-+++++|++.+..++..++.++
T Consensus        45 PLf~ts~h~~v~flfa~~~-~~l~~~~~~r~r-~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~  122 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALS-RRLYQCSVPRAR-VVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSIL  122 (349)
T ss_pred             chHHHHHHHHHHHHHHHHH-HHHHhccCCccc-cCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHH
Confidence            6777777777666665544 333222 0 011 122333 3556778999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHH
Q 019022          117 FTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNL  196 (347)
Q Consensus       117 ~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~  196 (347)
                      |+.+++.++.-||+++      .-..-+++..+|++++. ++.                     .+-...|..+...+.+
T Consensus       123 FIllFs~if~lEk~~w------~L~l~v~lI~~Glflft-~Ks---------------------Tqf~i~Gf~lv~~aS~  174 (349)
T KOG1443|consen  123 FILLFSLIFKLEKFRW------ALVLIVLLIAVGLFLFT-YKS---------------------TQFNIEGFFLVLAASL  174 (349)
T ss_pred             HHHHHHHHHHhHHHHH------HHHHHHHHHhhheeEEE-ecc---------------------cceeehhHHHHHHHHH
Confidence            9999999999999943      35566666667777766 222                     2344569999999999


Q ss_pred             HHHHHHHHHHHHhhhCC----chHHHHHHHHHHHHHHHHHHHHhccccccc-----ccccCch-hHHHHHHHHHHHHHHH
Q 019022          197 LISVWYIIQTQTMKLYP----AEFVVTLLYCLFATIISAPICFVGESNLSA-----WRLKPDI-ELASIVYSAFFGLSFI  266 (347)
Q Consensus       197 ~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~ll~~g~~~~~~~  266 (347)
                      +-++.+.+.+..+++.+    .|...++.......+.++|..+.+|+....     +...... .+..+...+. ++..+
T Consensus       175 ~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~la  253 (349)
T KOG1443|consen  175 LSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLA  253 (349)
T ss_pred             hhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHH
Confidence            99999999999988755    688888888888888999999999874222     1111221 2222222222 34444


Q ss_pred             HHHH---HHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          267 TVVH---TFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       267 ~~~~---~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      +.+-   +..+.+++....++.....-+.+.+++..+.+|.++...|+|..+.+.|+..+.
T Consensus       254 F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  254 FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            4432   345678999999999999999999999999999999999999999999998883

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.50  E-value=8.9e-13  Score=113.02  Aligned_cols=284  Identities=16%  Similarity=0.162  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHHH---hCC----CChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCC--------C-CCchhHHHHHHHH
Q 019022           22 TIVGENIIFKLAT---SKG----MSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASL--------P-LFKFPVISRICFL   84 (347)
Q Consensus        22 ~~~~~~~~~k~~~---~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~--------~-~~~~~~~~~~~~~   84 (347)
                      .=..+-+.+|++-   .++    -+|+..+..-++.-++++..+ .+++ |.|.+-.        . ..++-+...++.-
T Consensus        14 sGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf-~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~P   92 (372)
T KOG3912|consen   14 SGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVF-KLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPP   92 (372)
T ss_pred             hccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcccccccccccccCCCCcceecCh
Confidence            3445677778772   122    347888888888888888888 6665 4422110        0 0111122345556


Q ss_pred             HHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc
Q 019022           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (347)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~  164 (347)
                      ++|...+..+.|.|+.+++++.-+++.....+|+.+++.-++|+++      +.+||.|+.....|++++.. .+-..  
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti------~~~qWl~i~fv~lGlviVg~-~d~~~--  163 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTI------TGRQWLGILFVSLGLVIVGS-LDVHL--  163 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhccc------chhhHHHHHHHHhhhheeee-eeccc--
Confidence            6777888889999999999999999999999999999999999999      66699999999999988772 21100  


Q ss_pred             CCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhcccccc-
Q 019022          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLS-  242 (347)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (347)
                               ...+..+.++...|+++.+++.+.-|+.+++.+|..++.. +|.+...|...++.+++..+......-+. 
T Consensus       164 ---------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~  234 (372)
T KOG3912|consen  164 ---------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSG  234 (372)
T ss_pred             ---------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecC
Confidence                     0111234566789999999999999999999999998876 79999999999997776666554432100 


Q ss_pred             -cccccCc---hhHHH---------HHHHHHHHHHHHHHHHHHH----hccCCceeehhhhhHHHHHHHHHHHHHhcCcc
Q 019022          243 -AWRLKPD---IELAS---------IVYSAFFGLSFITVVHTFG----LRMKGPVYTAIFKPLSIAIAAITSFIFLSEAL  305 (347)
Q Consensus       243 -~~~~~~~---~~~~~---------ll~~g~~~~~~~~~~~~~~----l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~  305 (347)
                       .+.-.+.   .+|.-         .+++...+...+..+++.+    -|..+++.-..+..+...+..+++.....|.+
T Consensus       235 ~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f  314 (372)
T KOG3912|consen  235 DSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYF  314 (372)
T ss_pred             CcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence             0100000   01111         1223333333444444432    46778888899999999999999999999999


Q ss_pred             chhhhhhHHHHHHhhhhhh
Q 019022          306 HLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       306 ~~~~~iG~~li~~g~~l~~  324 (347)
                      +..|++|.++.+.|+++++
T Consensus       315 ~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  315 HLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999986

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.46  E-value=3.3e-13  Score=106.30  Aligned_cols=125  Identities=15%  Similarity=0.266  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 019022          196 LLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  275 (347)
Q Consensus       196 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~  275 (347)
                      ++||.+.+..|+..++.+ +....++++..+.+ +.+.....+...  ....+...+....+.+++++++++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            368999999999999987 99999999999998 666666655432  12224557888889999888999999999999


Q ss_pred             cCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          276 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       276 ~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      +.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.44  E-value=8.9e-11  Score=103.49  Aligned_cols=289  Identities=12%  Similarity=0.076  Sum_probs=207.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH--HHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH
Q 019022           11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVF--YSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (347)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (347)
                      ++....+.-.+.-..+.++.|..++..=-|..+..  .+++...+.+... -.. |-  -+.++.+++..++.+...++.
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~-~l--v~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRL-GL--VNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHh-ce--eecCCcChHHHHHHccHHHHH
Confidence            34555555555556677888999865544555555  7777776666655 322 22  333667888889999999999


Q ss_pred             HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCC
Q 019022           89 SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI  168 (347)
Q Consensus        89 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~  168 (347)
                      .+..+.-..+++|.++...+++.+..|+++++...+++|.++      +...+.++.....|......  .+        
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~------~~~v~~Sv~~m~~~s~~~~~--~d--------  151 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRP------SNKVWASVFAMIIGSVAAAF--TD--------  151 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCc------hhhHHHHHHHHHHHHHhhcc--cc--------
Confidence            888888999999999999999999999999999999998655      55677777777777766551  11        


Q ss_pred             CcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhccccc---ccc
Q 019022          169 PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL---SAW  244 (347)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  244 (347)
                                  ......|..+++...++-+.+.+..|+..+..+ ....++++..+.+.........++++..   .+.
T Consensus       152 ------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~  219 (314)
T KOG1444|consen  152 ------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNF  219 (314)
T ss_pred             ------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhc
Confidence                        222334899999999999999999998876554 4667889999999888888887776511   111


Q ss_pred             c-ccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhh
Q 019022          245 R-LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  323 (347)
Q Consensus       245 ~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~  323 (347)
                      + ......+..+...++ ++.+-.++-.+..+..+++..+++....-..+.+-..++.+++.++...+|..+-+.|-.++
T Consensus       220 ~~~~~~~~~~~~~lScv-~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y  298 (314)
T KOG1444|consen  220 DNWSDSSVLVVMLLSCV-MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY  298 (314)
T ss_pred             ccccchhHHHHHHHHHH-HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence            1 112224555555555 44444555566788889999999995555555555566667788999999999999998888


Q ss_pred             hccCccccc
Q 019022          324 LWGKANDEA  332 (347)
Q Consensus       324 ~~~~~~~~~  332 (347)
                      .+.+.++++
T Consensus       299 ~~~~~~~k~  307 (314)
T KOG1444|consen  299 SYATFRKKK  307 (314)
T ss_pred             hhhhhhhcc
Confidence            876644443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.43  E-value=4.7e-13  Score=105.40  Aligned_cols=123  Identities=24%  Similarity=0.412  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHhh
Q 019022           21 CTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTG   98 (347)
Q Consensus        21 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~a   98 (347)
                      ++||...+..|... ++.||...+++|+..+.+ ++++ .... ++  +. +..+++++......+.++ ..++.+++.+
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLIL-LLILGRK--PF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHH-HHhhccc--cc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence            46899999999996 579999999999999997 5555 4443 33  32 456777888888888886 9999999999


Q ss_pred             hhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           99 IAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        99 l~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +++++++.++.+.+++|+++.+++++++||++      +++++.|+++++.|+.++.
T Consensus        75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~------~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   75 LKYISASIVSILQYLSPVFAAILGWLFLGERP------SWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998      6669999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.23  E-value=4.6e-09  Score=92.15  Aligned_cols=252  Identities=12%  Similarity=0.107  Sum_probs=172.0

Q ss_pred             CChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCc--hhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHh-hhh
Q 019022           38 MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFK--FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIG-NLT  114 (347)
Q Consensus        38 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~-~~~  114 (347)
                      =+|.+...--...+.++-+.. .++ ++     +..+  .+.+...++.|++...++...+.++++.++|.+..+. .++
T Consensus        10 G~~~~Q~lG~t~Gali~alv~-~~~-~~-----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q   82 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVV-FLF-RQ-----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ   82 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHH-HHH-hC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence            345555544444444444444 333 33     3344  4778889999999999999999999999999998885 588


Q ss_pred             HHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHH
Q 019022          115 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLIS  194 (347)
Q Consensus       115 pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a  194 (347)
                      -+.+.+++.++++|--+.++  -..-..++++.++|+.+... +++..             +..+++.+...|....+++
T Consensus        83 Lvg~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~-~~~~~-------------~~~~~~~~~~kgi~~Ll~s  146 (269)
T PF06800_consen   83 LVGTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSY-QDKKS-------------DKSSSKSNMKKGILALLIS  146 (269)
T ss_pred             HHHHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhcc-ccccc-------------cccccccchhhHHHHHHHH
Confidence            88899999999999432110  01123477777788877662 22211             1112356677899999999


Q ss_pred             HHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 019022          195 NLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL  274 (347)
Q Consensus       195 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l  274 (347)
                      .+.|-.|.+..|..  +.+ +....+-+.+.-.+....+....+...  .   .+..|.. +..|+ .-.++..++..+.
T Consensus       147 tigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~~~~--~---~k~~~~n-il~G~-~w~ignl~~~is~  216 (269)
T PF06800_consen  147 TIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSKKPF--F---EKKSWKN-ILTGL-IWGIGNLFYLISA  216 (269)
T ss_pred             HHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhcccccc--c---ccchHHh-hHHHH-HHHHHHHHHHHhH
Confidence            99999999987763  333 666666665554444444444332111  1   1223322 34444 4457888899999


Q ss_pred             ccCCceeehhhhhHHHHHHHHHHHHHhcCccchh----hhhhHHHHHHhhhh
Q 019022          275 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG----SVIGGVITCVGFYT  322 (347)
Q Consensus       275 ~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~----~~iG~~li~~g~~l  322 (347)
                      ++.+.+..=.+..+.++++.+.+.+++||+=+..    .++|+++++.|.++
T Consensus       217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999987654    55788888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.18  E-value=6.8e-10  Score=99.02  Aligned_cols=132  Identities=17%  Similarity=0.267  Sum_probs=109.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--hHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHH
Q 019022            8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSY--FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS   85 (347)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   85 (347)
                      ...++..+.++++++|+...+..|... ++.+|  .....+++..+.+++.++ ....++   . +..+.+++...+..+
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~---~-~~~~~~~~~~~~~~~  198 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPF-AWFLGP---N-PQALSLQWGALLYLG  198 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHH-HHhcCC---C-CCcchHHHHHHHHHH
Confidence            456799999999999999999999995 45664  455557889988888887 655322   2 223566777788888


Q ss_pred             HHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhh
Q 019022           86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGA  151 (347)
Q Consensus        86 ~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv  151 (347)
                      +++ ..++.+++.++++.+++.++.+.++.|+++.++++++++|++      +..++.|..+.+.|+
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~------~~~~~~G~~li~~g~  259 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETL------SLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHhc
Confidence            887 899999999999999999999999999999999999999999      666999999999886

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.14  E-value=9.9e-11  Score=90.70  Aligned_cols=103  Identities=21%  Similarity=0.335  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHH
Q 019022           45 FYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI  123 (347)
Q Consensus        45 ~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~  123 (347)
                      .+|+..+.+++..+ ...+++.++..+..+++.+......|.++ ..++.+++.|+++.+ +.++++.+++|+++.++++
T Consensus         2 a~r~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLFLLII-LLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHH-HHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            57999999998888 66642211111223445566777878888 599999999999999 5889999999999999999


Q ss_pred             HhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022          124 IFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus       124 ~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +++|||+      +++++.+++++++|++++.
T Consensus        80 ~~~~er~------~~~~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   80 LFFKERL------SPRRWLAILLILIGVILIA  105 (113)
T ss_pred             HHhcCCC------CHHHHHHHHHHHHHHHHHh
Confidence            9999999      6669999999999999988

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.13  E-value=1.1e-09  Score=89.48  Aligned_cols=138  Identities=16%  Similarity=0.212  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhC-----C-chHHHHHHHHHHHHHHHHHHHHhcccccccc--c-cc------Cchh
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLY-----P-AEFVVTLLYCLFATIISAPICFVGESNLSAW--R-LK------PDIE  251 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~------~~~~  251 (347)
                      |..+++.|.++.+++++..|+..++.     . ++.+...+....+.+.+.+.....|......  . ..      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999999873     2 7999999999999999999998887642111  0 00      1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          252 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       252 ~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      +..++..|+ .........+..+++.+|...++...+..+..++.+++++||+++..+++|.++.+.|.+++.+
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            444444444 4556677778889999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.11  E-value=1.7e-09  Score=98.35  Aligned_cols=138  Identities=9%  Similarity=0.047  Sum_probs=110.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccccccc--ccCchhHHHHHHHHH
Q 019022          183 RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPDIELASIVYSAF  260 (347)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~g~  260 (347)
                      +..+|..+.++++++|+...+..|.. .+.+ +.+..+++..++.+.+.+......+. ....  ......+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQW-SYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccH-HHHHHHHcCHHHH-HHHHHHH
Confidence            45679999999999999999999765 5566 99999999999988777765543221 1100  0012222 2334666


Q ss_pred             HHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          261 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ++.+..+.++++++++.+++.++++.++.|++..+++++++||+++..+++|.++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6788889999999999999999999999999999999999999999999999999999987765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.09  E-value=3.2e-09  Score=95.90  Aligned_cols=134  Identities=13%  Similarity=0.099  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHH
Q 019022          188 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  267 (347)
Q Consensus       188 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  267 (347)
                      ..+.+.+++++|...+..|+..++.+ +.  ..+....+++.+.|+...... ...|+. .+..+......+..+....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSR-LPATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCC-cchhhHHHHHHHHHHHHHHH
Confidence            46788999999999999998877644 43  355555666777776654311 122221 22334445555666788899


Q ss_pred             HHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhcc
Q 019022          268 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  326 (347)
Q Consensus       268 ~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  326 (347)
                      .++++++++.+++.++++.+++|+++.+++++++||+++..+++|..+++.|+++....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999998877643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.04  E-value=1.2e-09  Score=89.27  Aligned_cols=216  Identities=15%  Similarity=0.173  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc
Q 019022           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (347)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~  164 (347)
                      .++..+.++.|..+++..+++.++.+..+..-|+.+++++++|+|+      ...++.+.++++.|++++.+ .++    
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~------~~~kIlaailAI~GiVmiay-~DN----  128 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRF------MGFKILAAILAIGGIVMIAY-ADN----  128 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccch------hhhhHHHHHHHhCcEEEEEe-ccc----
Confidence            3344678899999999999999999999999999999999999999      55599999999999998883 222    


Q ss_pred             CCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC--chHHHHHHHHHHHHHHHHHHHHh-ccccc
Q 019022          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP--AEFVVTLLYCLFATIISAPICFV-GESNL  241 (347)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  241 (347)
                                     ...+.+.|+.++..|+...|+|-+..|......+  |.-.++....++...+......+ .-...
T Consensus       129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V  193 (290)
T KOG4314|consen  129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV  193 (290)
T ss_pred             ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch
Confidence                           2345577999999999999999999999886654  33333333333322222111111 11112


Q ss_pred             ccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhh
Q 019022          242 SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY  321 (347)
Q Consensus       242 ~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~  321 (347)
                      +.|+......|+-+-..+.+..+ -..+.+.++....|...++-+....+--...+.++-+-..+.....|-.+|+.|..
T Consensus       194 E~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~Fi  272 (290)
T KOG4314|consen  194 EHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFI  272 (290)
T ss_pred             HHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            22321122345555444443333 24556677888889888888888888889999887777788899999999999988


Q ss_pred             hhhccC
Q 019022          322 TVLWGK  327 (347)
Q Consensus       322 l~~~~~  327 (347)
                      +.....
T Consensus       273 LiiiP~  278 (290)
T KOG4314|consen  273 LIIIPE  278 (290)
T ss_pred             heeccc
Confidence            776543

>TIGR00688 rarD rarD protein

Probab=99.03  E-value=5e-09  Score=93.33  Aligned_cols=136  Identities=10%  Similarity=0.083  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccc---ccccccCchh-HHHHHHHHHH
Q 019022          186 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL---SAWRLKPDIE-LASIVYSAFF  261 (347)
Q Consensus       186 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ll~~g~~  261 (347)
                      +|..+.++++++|+...+..|.. .+.+ +.+..+++++++.+.+.+.........   ...+...... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            38899999999999999999984 4566 999999999999988777654432210   1111011222 333445555 


Q ss_pred             HHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          262 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       262 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ..+..+.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            466889999999999999999999999999999999999999999999999999999977654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.00  E-value=1.7e-09  Score=92.77  Aligned_cols=280  Identities=15%  Similarity=0.137  Sum_probs=191.3

Q ss_pred             HHHHHHHHHhCC----CChhHHHHHHHHHHHHHHHhhhhhhhccC--CCCCC--CCchhHHHHHHHHHHHHHHHHHHHHh
Q 019022           26 ENIIFKLATSKG----MSYFVFVFYSYAATTLVLLLLFPFIFRSN--TASLP--LFKFPVISRICFLSLVGSFFRILGYT   97 (347)
Q Consensus        26 ~~~~~k~~~~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~   97 (347)
                      ....+|+.++..    -.|..++.+..+....+-..+ -...++.  +...+  +.+.+..+....+.+.......+-.+
T Consensus        43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~l-s~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnl  121 (347)
T KOG1442|consen   43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVL-SSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNL  121 (347)
T ss_pred             hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHH-HHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccce
Confidence            344567765321    237777777777665544433 2222110  01111  24555667777777766666666679


Q ss_pred             hhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCC
Q 019022           98 GIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP  177 (347)
Q Consensus        98 al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~  177 (347)
                      +++|++++...+-..+..+|+++++++++|+|-      +.....++++.+.|-.+=+   +++                
T Consensus       122 cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkT------s~~~~~~C~lIi~GF~lGv---dqE----------------  176 (347)
T KOG1442|consen  122 CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKT------SFFALGCCLLIILGFGLGV---DQE----------------  176 (347)
T ss_pred             ehhhcceEEEEeccchhhhHHHHhHHhhccccc------ccccceeehhheehheecc---ccc----------------
Confidence            999999999999999999999999999999977      3346666666666543322   111                


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhccccccccc--ccCc-hhHH
Q 019022          178 QSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPD-IELA  253 (347)
Q Consensus       178 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~  253 (347)
                      +.++.-...|.++...|.++-|+..+..|+...... ....++++..+.+.+.++|...+.++-...+.  ..+. ..|.
T Consensus       177 ~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~  256 (347)
T KOG1442|consen  177 GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWI  256 (347)
T ss_pred             cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHH
Confidence            122445567999999999999999999997765554 34588999999999999998877654211111  1122 2444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCccccc
Q 019022          254 SIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA  332 (347)
Q Consensus       254 ~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~  332 (347)
                      .+...|+++-.++| .-.+-+|-.+|...++-....-..-.+++..+++|.-+..-|-|-++++.|...+.+-|+.+.+
T Consensus       257 ~mtLsglfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~  334 (347)
T KOG1442|consen  257 LMTLSGLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR  334 (347)
T ss_pred             HHHHHHHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence            44444443332222 2233478899999999999999999999999999999999999999999998888876554443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.98  E-value=3.1e-07  Score=83.91  Aligned_cols=301  Identities=13%  Similarity=0.069  Sum_probs=180.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHH--HHhhh-hhhh-ccCCCCCCCCchhHHHHHHH
Q 019022            8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLV--LLLLF-PFIF-RSNTASLPLFKFPVISRICF   83 (347)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~--l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~   83 (347)
                      +-..+++..+++.++||+.++..|+.  +.-+=..+  |- +.+.+.  +.++. .... +.-.+.....+.+.+...++
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~--W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV--KKWSWETM--WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc--CCCchhHH--HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            35678999999999999999999995  44332211  11 111111  11110 0000 11001112346777888888


Q ss_pred             HHHHHHHHHHHHHhhhhccChhhHHHH-hhhhHHHHHHHHHHhhhccc---cccccCcceeeehhhhhhhhhhhhhhccC
Q 019022           84 LSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENL---ALSSLSTWAKIIGTLVSVSGAMLVVLYKG  159 (347)
Q Consensus        84 ~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~a~~~~~e~~---~~~~~~~~~~~~gi~l~~~Gv~li~~~~g  159 (347)
                      .|++-..++..++.++++.+.+.+..+ ..++-+...++..++++|=-   +.+  -...-++|+++.++|+.+... .|
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag  155 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AG  155 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hh
Confidence            999999999999999999999999776 66999999999999988611   111  133467888888999888773 22


Q ss_pred             cccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHhhhCCchHHHHHHHHH---HHHHH
Q 019022          160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWY-------IIQTQTMKLYPAEFVVTLLYCL---FATII  229 (347)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~~~~  229 (347)
                      ...+..        +..+.+++.+..+|..+++.+++.++.|+       ...+...+...++......+..   .+...
T Consensus       156 ~~k~~~--------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        156 QLKERK--------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             hhcccc--------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence            111100        00000235677899999999999999999       4444322111123332222222   33333


Q ss_pred             H-HHHHHh---cccccccccc--cCc----hhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehh---hh-hHHHHHHHH
Q 019022          230 S-APICFV---GESNLSAWRL--KPD----IELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAI---FK-PLSIAIAAI  295 (347)
Q Consensus       230 ~-~~~~~~---~~~~~~~~~~--~~~----~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~---~~-~l~pv~a~i  295 (347)
                      . ..++..   .+++......  .+.    .+...-...|+ .-.+++.++..+-.+.+......   +. .+..+++.+
T Consensus       228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            3 333332   2121111110  011    11111133333 45567778888877776655544   44 677799999


Q ss_pred             HHHHHhcCccc------hhhhhhHHHHHHhhhhhhcc
Q 019022          296 TSFIFLSEALH------LGSVIGGVITCVGFYTVLWG  326 (347)
Q Consensus       296 ~~~~~~ge~~~------~~~~iG~~li~~g~~l~~~~  326 (347)
                      +|.+ +||.=+      ...++|+++++.|..+...+
T Consensus       307 wGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        307 WGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9995 999755      56789999999998776544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.96  E-value=1.1e-08  Score=87.97  Aligned_cols=241  Identities=12%  Similarity=0.072  Sum_probs=162.8

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHhhhhcc-ChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhh
Q 019022           71 PLFKFPVISRICFLSLVGSFFRILGYTGIAYS-SPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVS  149 (347)
Q Consensus        71 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~-~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~  149 (347)
                      ++++.+++...   -.+....+.+-++++++- +...=.++..-.++.++++++++.|.|-      +.+|..++++..+
T Consensus        60 ~kiplk~Y~i~---V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Y------s~~Qy~Sv~~iTi  130 (330)
T KOG1583|consen   60 PKIPLKDYAIT---VAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRY------SLRQYSSVLMITI  130 (330)
T ss_pred             CCCchhhhhee---hheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhcccee------ehhhhhhHHhhhh
Confidence            44555544322   222244555666788874 5555566788899999999999988866      6669999999999


Q ss_pred             hhhhhhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHH
Q 019022          150 GAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATI  228 (347)
Q Consensus       150 Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~  228 (347)
                      |+++..+.+.++.+..   ..+.++.+..++...+..|+.+...+.+..|.-.+.++...+|+. ++.+.++|..+.+..
T Consensus       131 GiiIcTl~s~~d~~~~---~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP  207 (330)
T KOG1583|consen  131 GIIICTLFSSKDGRSK---LSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP  207 (330)
T ss_pred             hheeEEeecCcchhhh---hcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc
Confidence            9999886555544331   111122233455677789999888888888888888888888875 688999998887665


Q ss_pred             HHHHHHHhccc------ccccc-----cccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHH
Q 019022          229 ISAPICFVGES------NLSAW-----RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITS  297 (347)
Q Consensus       229 ~~~~~~~~~~~------~~~~~-----~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~  297 (347)
                      ..+...-..-+      ..+..     ...-+..|..++...+ .+-.+.-..+..-.+.++..+++...+.-.+..+++
T Consensus       208 ~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~S  286 (330)
T KOG1583|consen  208 LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFS  286 (330)
T ss_pred             hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhhe
Confidence            55433211000      00000     0001224444433222 332333333444567889999999999999999999


Q ss_pred             HHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          298 FIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       298 ~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      .+.+..++++..|+|..+++.|.+++.
T Consensus       287 iiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  287 IIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             eeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999977754

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.96  E-value=3.3e-08  Score=84.92  Aligned_cols=228  Identities=14%  Similarity=0.129  Sum_probs=174.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           76 PVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        76 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ..|+.+..++.+..+...+...++.|.+=....+...+--+-+++.+.++-+.      |+++.+..+..+...|.++..
T Consensus       104 iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGk------RY~v~d~~aA~lm~lGli~FT  177 (367)
T KOG1582|consen  104 IPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGK------RYGVHDYIAAMLMSLGLIWFT  177 (367)
T ss_pred             cchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccc------cccHHHHHHHHHHHHHHHhhh
Confidence            34666777777777777777888888876655666777777777778777444      458889999999999999888


Q ss_pred             hccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHH
Q 019022          156 LYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPIC  234 (347)
Q Consensus       156 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  234 (347)
                      +.+.+.                  +.+-...|.+..-++-++.|.---.+.+..+..+ +..++.++....+.+.++...
T Consensus       178 LADs~~------------------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~m  239 (367)
T KOG1582|consen  178 LADSQT------------------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPM  239 (367)
T ss_pred             hccccc------------------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHH
Confidence            533332                  2333457888888888888888888999988876 566888888889999888888


Q ss_pred             Hhcccccccccc---cCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhh
Q 019022          235 FVGESNLSAWRL---KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI  311 (347)
Q Consensus       235 ~~~~~~~~~~~~---~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~i  311 (347)
                      ..+++-...|..   .|...++....... .+.++.......++..++..++.+....-.++++++++++..++|....-
T Consensus       240 vlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~  318 (367)
T KOG1582|consen  240 VLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVW  318 (367)
T ss_pred             HhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhh
Confidence            877665554532   12223444444444 55567777777889999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhhhhhccCc
Q 019022          312 GGVITCVGFYTVLWGKA  328 (347)
Q Consensus       312 G~~li~~g~~l~~~~~~  328 (347)
                      |..+++.|+++-.+.|+
T Consensus       319 ~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  319 SGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             hhHHHHHHHHhhcccCC
Confidence            99999999999777663

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.92  E-value=3.1e-08  Score=90.01  Aligned_cols=134  Identities=9%  Similarity=0.054  Sum_probs=108.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH
Q 019022            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (347)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (347)
                      ...+.++.+.++++|+...+..|... ++.+|..... -...+.+++.++ .... .  .. ...+...+...+..|++.
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~-~~~~~~~~l~~~-~~~~-~--~~-~~~~~~~~~~~l~lgv~~  218 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAG-AEHGPATVAI-GSLIAALIFVPI-GALQ-A--GE-ALWHWSILPLGLAVAILS  218 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHH-HHHHHHHHHHHH-HHHc-c--Cc-ccCCHHHHHHHHHHHHHH
Confidence            34588899999999999999999994 5678877654 445566666666 5442 2  11 223445555667788887


Q ss_pred             -HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        89 -~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                       ...+.+++.++++.++++++.+.+++|++..++++++++|++      +..+++|..+.+.|++...
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~------~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETL------TLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHH
Confidence             889999999999999999999999999999999999999988      7779999999999998876

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.91  E-value=4e-08  Score=77.33  Aligned_cols=122  Identities=20%  Similarity=0.189  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHH
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  266 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  266 (347)
                      |..+.+.+.++-+...++-|+-.++.+ +.+.....     . ......     .         +....+++|+++++++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~~-----~-~~~~~~-----~---------~p~~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWDF-----I-AALLAF-----G---------LALRAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhHH-----H-HHHHHH-----h---------ccHHHHHHHHHHHHHH
Confidence            677888888888888899998887765 22211110     0 000000     0         0123578899999999


Q ss_pred             HHHHHHHhccCCceeehhhhhHHHHHHHHHHHH--HhcCccchhhhhhHHHHHHhhhhhhccCcc
Q 019022          267 TVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI--FLSEALHLGSVIGGVITCVGFYTVLWGKAN  329 (347)
Q Consensus       267 ~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~--~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  329 (347)
                      +.+|.+++++.+++.+.++....++...+.++.  ++||++|+.+++|.++|++|+++..+++++
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            999999999999999999999998888888875  799999999999999999999998865554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.88  E-value=4.6e-08  Score=88.84  Aligned_cols=136  Identities=15%  Similarity=0.038  Sum_probs=110.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH
Q 019022            9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG   88 (347)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (347)
                      ...+.+..+.++++|+...+..|.. .+ -++...+.+....+.+.+.++ ......  ......+.+.|......++++
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIA-SLLSGE--RLTALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHH-HHHcCC--cccccCCHHHHHHHHHHHHHH
Confidence            3568899999999999999999997 33 345666778888888877777 554211  110112456677888888887


Q ss_pred             -HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        89 -~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                       ...+.+++.++++.++++++.+.++.|++.+++++++++|++      +..+++|..+.+.|+.+..
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~------t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETL------SPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHHHHH
Confidence             899999999999999999999999999999999999999998      7779999999999998876

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.82  E-value=8.8e-08  Score=89.04  Aligned_cols=138  Identities=15%  Similarity=0.211  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHH
Q 019022          186 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  265 (347)
Q Consensus       186 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~  265 (347)
                      .-...+++..++|+.+.++.|...+..-++....++++.++++++.++....+... .++..+...+..+...|++. .+
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~~~~~~~~~~l~l~g~~g-~~   90 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLPPLSVSILSKIGLLGFLG-SM   90 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchHHHHHHHHHHHHHH-HH
Confidence            45567777889999999999999977656999999999999999999887654211 11111233567777788766 56


Q ss_pred             HHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHH------hcCccchhhhhhHHHHHHhhhhhhc
Q 019022          266 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF------LSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       266 ~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~------~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      .+.+++.++++++++.++++.++.|+++.++++++      ++|+++..+++|.++-++|+.+...
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            67789999999999999999999999999999999      6999999999999999999887664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.82  E-value=8.5e-08  Score=87.26  Aligned_cols=132  Identities=17%  Similarity=0.196  Sum_probs=102.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 019022           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS   89 (347)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (347)
                      ..+.++++.++++|+...+..|... ++.++.....   ..+.+.+.+. ... ..  ......+.+.+...+..++...
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~-~~~-~~--~~~~~~~~~~~~~l~~~~~~t~  226 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIK-YFL-SP--QPAMVFSLPAIIKLLLAAAAMG  226 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHH-HHH-hc--CccccCCHHHHHHHHHHHHHHH
Confidence            4588899999999999999999984 5677765432   2233333332 222 22  1112345566777777776558


Q ss_pred             HHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        90 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ..+.+++.++++.+++.++.+.++.|++..++++++++|++      +..+++|.++.+.|+.+..
T Consensus       227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~------~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPL------SFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHhHHHHh
Confidence            89999999999999999999999999999999999999999      6679999999999998776

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.79  E-value=3.8e-08  Score=82.20  Aligned_cols=262  Identities=14%  Similarity=0.154  Sum_probs=176.1

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHH
Q 019022           41 FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI  120 (347)
Q Consensus        41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i  120 (347)
                      +.+.+.+.+...+.+..+ -+. |-     ...+..+.+..+..+++.....+.-..++.|.+....++..++..+.++.
T Consensus        38 flll~vQSlvcvv~l~iL-k~l-~~-----~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAy  110 (309)
T COG5070          38 FLLLAVQSLVCVVGLLIL-KFL-RL-----VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAY  110 (309)
T ss_pred             hHHHHHHHHHHHHHHHHH-HHH-hH-----hheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHh
Confidence            344555555554444444 222 21     11123333444555665655666677899999999999999999999999


Q ss_pred             HHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 019022          121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISV  200 (347)
Q Consensus       121 ~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~  200 (347)
                      ...+++|.|+      +-..+..-++.+.....-.  .++.       +...      ...+..+.|.+.+..-++.-+.
T Consensus       111 gEvl~Fgg~v------tsl~l~SFilMvlSS~va~--w~D~-------q~~~------~~~~~lN~GY~Wm~~Nclssaa  169 (309)
T COG5070         111 GEVLFFGGRV------TSLELLSFILMVLSSVVAT--WGDQ-------QASA------FKAQILNPGYLWMFTNCLSSAA  169 (309)
T ss_pred             hHHHHhcCcc------chhhHHHHHHHHHHHHHhc--cchh-------hHHH------HHhcccCCceEEEehhhHhHHH
Confidence            9999999987      4456665555544443322  2221       1111      1123445688888888888888


Q ss_pred             HHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHHHHHhcccc-cccccc-cCchhHHHHHHHHHHHHHHHHHHHHHHhccC
Q 019022          201 WYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN-LSAWRL-KPDIELASIVYSAFFGLSFITVVHTFGLRMK  277 (347)
Q Consensus       201 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~  277 (347)
                      +-...|+-.+-.. .....++|....+..+++.+..++|+. +..... .+.....+....|+ |++.--.+-.|.++..
T Consensus       170 fVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrVt  248 (309)
T COG5070         170 FVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVT  248 (309)
T ss_pred             HHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEeeh
Confidence            8777777654332 467889999999999999999888763 221111 12223344445555 7766677778889999


Q ss_pred             CceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCcccc
Q 019022          278 GPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  331 (347)
Q Consensus       278 ~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~  331 (347)
                      +.+.-+++..+.-.-..+-|.++++|+.+...+....+=..+..++...+.+++
T Consensus       249 SSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             hhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999888887766666555444333

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.79  E-value=4e-08  Score=76.05  Aligned_cols=108  Identities=15%  Similarity=0.260  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHH
Q 019022          221 LYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  300 (347)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~  300 (347)
                      +...++.+.............+.++......+......|+++...++.+++++.++.++ .++++..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44556666666655554332221221123456667777887777899999999999995 88899999999999999999


Q ss_pred             hcCccchhhhhhHHHHHHhhhhhhccCcc
Q 019022          301 LSEALHLGSVIGGVITCVGFYTVLWGKAN  329 (347)
Q Consensus       301 ~ge~~~~~~~iG~~li~~g~~l~~~~~~~  329 (347)
                      ++|+++..+++|..+++.|+.++.+.+..
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999998876543

>TIGR00803 nst UDP-galactose transporter

Probab=98.77  E-value=6.3e-08  Score=84.32  Aligned_cols=207  Identities=13%  Similarity=0.058  Sum_probs=130.7

Q ss_pred             ChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCcc-----------cccCCCCCcc
Q 019022          103 SPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT-----------IMSTASIPAQ  171 (347)
Q Consensus       103 ~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~-----------~~~~~~~~~~  171 (347)
                      +........+..++++++......+||.      +..|+++.++...|++...+.+.+.           ....++.   
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~------~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~---   73 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQV------TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS---   73 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceee------ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC---
Confidence            3444566778899999999998888877      5568999998888887544211110           0000000   


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchH-HHHHHHHHHHHHHHHHHHHhcccc-cccccccCc
Q 019022          172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEF-VVTLLYCLFATIISAPICFVGESN-LSAWRLKPD  249 (347)
Q Consensus       172 ~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  249 (347)
                         .+.....++...|....+.+..+.+...+..++..|+.+... .-+....+++.+.........+.+ ...+.  .-
T Consensus        74 ---~~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~  148 (222)
T TIGR00803        74 ---SAKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG--FF  148 (222)
T ss_pred             ---CccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccC--cc
Confidence               000112345677888888888888888888888766554121 122222233333222212111111 11111  00


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhh
Q 019022          250 IELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  323 (347)
Q Consensus       250 ~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~  323 (347)
                      ..+....+.-+++.+.+..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       149 ~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       149 IGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             cCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            01111122222356677788899999999999999999999999999999999999999999999999997653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.74  E-value=5.6e-07  Score=81.54  Aligned_cols=229  Identities=15%  Similarity=0.207  Sum_probs=126.6

Q ss_pred             HHHHHHHHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhcc
Q 019022           80 RICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYK  158 (347)
Q Consensus        80 ~~~~~g~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~  158 (347)
                      ..++.|++. ..+..+-+.|+.+.|++..+.+....-++.++++..++|||+      +++++.|+.+++.|..++.. .
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~------~~~~~~G~~l~i~G~~liv~-~  123 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL------TRRDIVGCALIILGSVLIVI-F  123 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc------hHhHHhhHHHHHhhheeeEE-e
Confidence            345556555 667778889999999999999999999999999999999999      66699999999999988773 3


Q ss_pred             CcccccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH-------H
Q 019022          159 GPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIIS-------A  231 (347)
Q Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  231 (347)
                      ++..+..    .+.++-...-.++.+.. ... +...+...+.....++..++ + ..........+++...       .
T Consensus       124 ~~~~~~~----~t~~~l~~~~~~~~fl~-y~~-~~~~~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~  195 (300)
T PF05653_consen  124 APKEEPI----HTLDELIALLSQPGFLV-YFI-LVLVLILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISI  195 (300)
T ss_pred             CCCCCCc----CCHHHHHHHhcCcceeh-hHH-HHHHHHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHH
Confidence            3322111    00000000000111111 111 11111222222222232222 1 1100000011111100       0


Q ss_pred             HHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHH-HHHHHHHHHHHhcCcc--ch-
Q 019022          232 PICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS-IAIAAITSFIFLSEAL--HL-  307 (347)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~-pv~a~i~~~~~~ge~~--~~-  307 (347)
                      ......+++ .+..  .+..|..++.+ +.+........++++++.+++.+.++.+.. ...+++-|.++++|.-  +. 
T Consensus       196 ~i~~~~~g~-~~f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~  271 (300)
T PF05653_consen  196 LIKLTFSGD-NQFT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAW  271 (300)
T ss_pred             HHHHHhcCc-hhhh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHH
Confidence            000011111 1111  22344333333 335666677788999999999988776654 4555666778888753  44 


Q ss_pred             ---hhhhhHHHHHHhhhhhhccC
Q 019022          308 ---GSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       308 ---~~~iG~~li~~g~~l~~~~~  327 (347)
                         ....|+.+++.|+++....|
T Consensus       272 ~~~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  272 QIIGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHHHHhhheeeccC
Confidence               34577888889988876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.72  E-value=4.5e-07  Score=82.67  Aligned_cols=127  Identities=8%  Similarity=0.068  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHH
Q 019022          188 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  267 (347)
Q Consensus       188 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  267 (347)
                      ..+.++++++|+...+..|...++.+ |....++++.++++...++..  .. .        ..+......|+......+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~-~--------~~~~~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RP-K--------VPLNLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CC-C--------CchHHHHHHHHHHHHHHH
Confidence            35688889999999999999888776 999999999988776655431  11 1        112233344554444555


Q ss_pred             HHHHHHhcc-CCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhcc
Q 019022          268 VVHTFGLRM-KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  326 (347)
Q Consensus       268 ~~~~~~l~~-~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~  326 (347)
                      .+++.+.++ .++..++++..+.|+++.++++++++|+++..+++|+++.+.|+.+..+.
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            667778876 57889999999999999999999999999999999999999998877653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.58  E-value=1.4e-06  Score=71.08  Aligned_cols=133  Identities=21%  Similarity=0.340  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCCCC---C-------c
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSK------GMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPL---F-------K   74 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~---~-------~   74 (347)
                      |.+.++.+.++.+...+..|..+.+      ..++.++..+-...+.+.+.+. .... +.  +..+.   .       +
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~-~~~~e~~--~~~~~~~~~~~~~~~~~   77 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPL-AFLLEGP--QLSSFFSEIFGEELSSD   77 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH-HHHHhhh--hhhhHHHHhhhhhhcch
Confidence            4567889999999999999999865      7999999999999999999988 6664 22  10000   0       2


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhh
Q 019022           75 FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (347)
Q Consensus        75 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  153 (347)
                      .+.+..++..|++....+...+..+++++|...+++.....+.+.+++.++++|++      +..++.|+++++.|+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~------t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI------TPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC------CHHHHHHHHHHHHHHhe
Confidence            34455677777777999999999999999999999999999999999999999999      66799999999999865

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.53  E-value=1.9e-06  Score=78.64  Aligned_cols=121  Identities=12%  Similarity=0.106  Sum_probs=96.0

Q ss_pred             HHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 019022          200 VWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGP  279 (347)
Q Consensus       200 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~  279 (347)
                      .+++++|...++.+.|......++..+.+...+...........   .+..++..++..|++ .+..+.+.+.++++.++
T Consensus        16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~   91 (302)
T TIGR00817        16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLK---ISSALLKLLLPVAIV-HTIGHVTSNVSLSKVAV   91 (302)
T ss_pred             HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHHHHH-HHHHHHHHHHHHHhccH
Confidence            34456788887766699999999988877765552111111111   134478888888886 57788999999999999


Q ss_pred             eeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          280 VYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       280 ~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      +..+++..+.|+++.++++++++|+++..+++|..+++.|+.+..
T Consensus        92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999987653

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.49  E-value=1.3e-06  Score=67.06  Aligned_cols=68  Identities=12%  Similarity=0.004  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          257 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       257 ~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ..++.+.+.++.++..++++.+...+-.+..+.++++.+.+++++||+++..+++|..+++.|+.+..
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34446788899999999999999999999999999999999999999999999999999999987754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.48  E-value=2.6e-06  Score=74.61  Aligned_cols=138  Identities=14%  Similarity=0.092  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhccccccccc-ccCchhHHHHHHHHHHHH
Q 019022          185 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR-LKPDIELASIVYSAFFGL  263 (347)
Q Consensus       185 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~g~~~~  263 (347)
                      ..|.++++.+-+.|+....+.|.+ ++.+ +.++..++.+.+...+........+...-++ ...+..+......+...+
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            459999999999999888777664 6666 8899999999998888877766644322222 123446666666666554


Q ss_pred             HHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          264 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       264 ~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                       ..+..|.++..+..+.++|.-+++.|++.+++|.++++|+++..|++...+..+|+....+
T Consensus        84 -~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          84 -LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             -HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence             6899999999999999999999999999999999999999999999999999999887665

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.47  E-value=8.1e-06  Score=76.04  Aligned_cols=136  Identities=14%  Similarity=0.198  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHH
Q 019022          188 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  267 (347)
Q Consensus       188 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  267 (347)
                      ..+.+.-=.+...++...|...+..+-|.++..+++..+.+.+............... .....+..++.+|++.. ..+
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~-~~~  128 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL-FVH  128 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-HHH
Confidence            3343333344456677788888777669999999999998876554322111111110 02236677778888554 457


Q ss_pred             HHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          268 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       268 ~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      ...+.++++.+++.+.++..++|++++++++++++|+++..+++|++++++|+.+...
T Consensus       129 ~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        129 FGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            7777999999999999999999999999999999999999999999999999887653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.46  E-value=2.9e-06  Score=76.97  Aligned_cols=129  Identities=12%  Similarity=0.017  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHH---HHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHH
Q 019022           10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYA---ATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (347)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (347)
                      .|+.+..+++.+.++......|..   +.+|...++....   ++..++... .   ++  .+ +. +.+..+..++.|+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~-~---~~--~~-~~-~~~~~~~~~~~Gi  219 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLG-H---IL--AK-PL-KKYAILLNILPGL  219 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHH-H---hc--cc-ch-HHHHHHHHHHHHH
Confidence            679999999999999999999976   4888888555554   333333322 1   22  22 22 3444555666888


Q ss_pred             HHHHHHHHHHhhhh-ccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceee----ehhhhhhhhhhhhh
Q 019022           87 VGSFFRILGYTGIA-YSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKI----IGTLVSVSGAMLVV  155 (347)
Q Consensus        87 ~~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~----~gi~l~~~Gv~li~  155 (347)
                      +....+.+++.+.+ +.+++.+.++.+..|+...+.+.+++||+.      +++++    +|.++.+.|+.++.
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~------~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK------TKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC------CcceeehhHHHHHHHHHHHHHHh
Confidence            88888999999999 999999999999999999999999999998      55688    99999999988765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.33  E-value=4.3e-06  Score=64.17  Aligned_cols=65  Identities=12%  Similarity=0.077  Sum_probs=59.2

Q ss_pred             HHHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           85 SLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        85 g~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ++++ ..+..++..+++..+.+.+..+.++.++++.+++++++|||+      +.++++|+.+.+.|++++.
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l------s~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV------SPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            3344 889999999999999999999988999999999999999999      6669999999999998875

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.32  E-value=4.9e-06  Score=73.77  Aligned_cols=278  Identities=17%  Similarity=0.157  Sum_probs=158.6

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHH
Q 019022            6 SYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS   85 (347)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   85 (347)
                      ..+...+....+...++.|.+..+-|+...+           ...     ...     |.+..-.+..+.    ..+..|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~-----~~~-----ra~~gg~~yl~~----~~Ww~G   70 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA-----SGL-----RAGEGGYGYLKE----PLWWAG   70 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh-----hcc-----cccCCCcchhhh----HHHHHH
Confidence            3456677777777788888888887777421           100     011     110011022211    355566


Q ss_pred             HHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc
Q 019022           86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS  164 (347)
Q Consensus        86 ~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~  164 (347)
                      ++. ..+...-|.|+.|.|++..+.+-+++-+..++++..++|||+      +....+|+.++++|..+++ ..+|..+.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl------~~~g~lGc~l~v~Gst~iV-~haP~e~~  143 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKL------NLLGILGCVLCVVGSTTIV-IHAPKEQE  143 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHH------HHhhhhheeEEecccEEEE-EecCcccc
Confidence            666 777777789999999999999999999999999999999999      5559999999999999988 34443322


Q ss_pred             CCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHH----------HH
Q 019022          165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAP----------IC  234 (347)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  234 (347)
                      ..+.+...+    -..++.+..=..+.++...   +-....+   +++. ......|....+.+..+-          .-
T Consensus       144 i~t~~el~~----~~~~~~Fliy~~~iil~~~---il~~~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~aik  212 (335)
T KOG2922|consen  144 IESVEEVWE----LATEPGFLVYVIIIILIVL---ILIFFYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAIK  212 (335)
T ss_pred             cccHHHHHH----HhcCccHHHHHHHHHHHHH---HHheeec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHHH
Confidence            211111000    0112222211222221111   1111111   1222 222222222222221100          00


Q ss_pred             HhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhH-HHHHHHHHHHHHhcCccc--h----
Q 019022          235 FVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL-SIAIAAITSFIFLSEALH--L----  307 (347)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l-~pv~a~i~~~~~~ge~~~--~----  307 (347)
                      ....+..+   ...+..|..++.+.. |...-....+++++..+++.++++.+. -..++++-+.++++|.-.  .    
T Consensus       213 lt~~g~~q---l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~  288 (335)
T KOG2922|consen  213 LTFSGNNQ---LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIA  288 (335)
T ss_pred             HHhcCCcc---cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            11111111   113345555555554 555666778899999999988877665 455667778888887532  2    


Q ss_pred             hhhhhHHHHHHhhhhhhccCccc
Q 019022          308 GSVIGGVITCVGFYTVLWGKAND  330 (347)
Q Consensus       308 ~~~iG~~li~~g~~l~~~~~~~~  330 (347)
                      ....|++.++.|+++....|.++
T Consensus       289 ~~~~Gf~ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  289 GELCGFVTIFLGIFLLHRTKDME  311 (335)
T ss_pred             HHHHhHHHhhheeeEeeeecccc
Confidence            45688999999998886655433

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.23  E-value=5.7e-05  Score=67.99  Aligned_cols=142  Identities=18%  Similarity=0.272  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHH
Q 019022          184 WVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGL  263 (347)
Q Consensus       184 ~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~  263 (347)
                      ...+....+..++.|+......+...+...+...........+.....+.... +. .....  ....+......+.+..
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~--~~~~~~~~~~~~~~~~   80 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EP-RGLRP--ALRPWLLLLLLALLGL   80 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hc-ccccc--cccchHHHHHHHHHHH
Confidence            44577888888899999999998887763325555555666666663332221 11 10111  1112455667777788


Q ss_pred             HHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHH-HHhcCccchhhhhhHHHHHHhhhhhhccCcc
Q 019022          264 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSF-IFLSEALHLGSVIGGVITCVGFYTVLWGKAN  329 (347)
Q Consensus       264 ~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~-~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~  329 (347)
                      ...+.+++.++++.++..++.+.++.|++..++++ ++++|+++..+++|..+.+.|+++..+....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            89999999999999999999999999999999997 6679999999999999999999888775543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.18  E-value=2.5e-07  Score=78.56  Aligned_cols=272  Identities=13%  Similarity=0.064  Sum_probs=178.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (347)
                      .++..++=++.||..+.+..+.   +=.|.+.+.--...+.++.+.. .++ .+     |..+.+.+..-++.|.+...+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv-~~~-~~-----p~~T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIV-FLF-VS-----PELTLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHH-hee-ec-----CccchhhHHHHHHhhhHhhhh
Confidence            4667788889999998887666   4566666554444444444444 333 33     445666677777778888999


Q ss_pred             HHHHHhhhhccChhhHHHHh-hhhHHHHHHHHHHhhhccccccccCccee----eehhhhhhhhhhhhhhccCcccccCC
Q 019022           92 RILGYTGIAYSSPTLASMIG-NLTPGFTFILAIIFRMENLALSSLSTWAK----IIGTLVSVSGAMLVVLYKGPTIMSTA  166 (347)
Q Consensus        92 ~~~~~~al~~~~~~~~~~l~-~~~pi~~~i~a~~~~~e~~~~~~~~~~~~----~~gi~l~~~Gv~li~~~~g~~~~~~~  166 (347)
                      +...+.|+++.+++.+..+. .++-+-+.+++.+.++|=-      +..+    .+++++.+.|+.+-. .+++..    
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~------t~~~~IlG~iAliliviG~~lTs-~~~~~n----  141 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWT------TPTQIILGFIALILIVIGIYLTS-KQDRNN----  141 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccC------cchhHHHHHHHHHHHHHhheEee-eecccc----
Confidence            99999999999999998884 4888899999999999932      2222    233444444444433 122111    


Q ss_pred             CCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 019022          167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRL  246 (347)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (347)
                               .+.++.++..+|....+.|.+.|-.|.+..+...-+.-+.+.-....+..+++.+   ....++ .  .  
T Consensus       142 ---------k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~---~~~~~~-~--~--  204 (288)
T COG4975         142 ---------KEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALIL---GFFKME-K--R--  204 (288)
T ss_pred             ---------ccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHH---hhcccc-c--c--
Confidence                     1123455567899999999999999998888765221122223333333333322   221111 0  1  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhh----hhhHHHHHHhhhh
Q 019022          247 KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGS----VIGGVITCVGFYT  322 (347)
Q Consensus       247 ~~~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~----~iG~~li~~g~~l  322 (347)
                       .+.....-+.-|+ .-+.+...+..+.++.+.+..=.++.+..+++.+-+.++++|+=|..+    ++|.++++.|..+
T Consensus       205 -~~K~t~~nii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         205 -FNKYTWLNIIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             -hHHHHHHHHhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence             2223333345555 344678888888889999888888899999999999999999887654    5788888887554


Q ss_pred             h
Q 019022          323 V  323 (347)
Q Consensus       323 ~  323 (347)
                      .
T Consensus       283 l  283 (288)
T COG4975         283 L  283 (288)
T ss_pred             h
Confidence            3

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.15  E-value=5.3e-05  Score=69.39  Aligned_cols=142  Identities=15%  Similarity=0.046  Sum_probs=111.8

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCCCCCchhHHHHHHHH
Q 019022            6 SYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFL   84 (347)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   84 (347)
                      ..+..+|=+.++.+++++|.+.+.-+... ++.++.++..+--+.+.++..+. +... +++.+. ..++.+....++..
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq-~~ile~~~i~~-~~w~~~~~~~~v~~  239 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQ-LAILERSGIES-IHWTSQVIGLLVGY  239 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHH-HHheehhhhhc-cCCChhhHHHHHHH
Confidence            35678899999999999999999999997 57899998888888888887777 5544 543333 23344444444444


Q ss_pred             HHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhh
Q 019022           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL  156 (347)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  156 (347)
                      +++....+.+.-..+++++|....+=.-+..++.+++..+++++++      ++..++|.++.++|.++...
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~------~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKF------SWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccc------cHHHHHHHHHHHHHhheEEc
Confidence            4444666677788899999998888778899999999999999999      77799999999999988763

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.03  E-value=3e-05  Score=59.98  Aligned_cols=71  Identities=14%  Similarity=0.220  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHHhccCCceeeh-hhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCc
Q 019022          258 SAFFGLSFITVVHTFGLRMKGPVYTA-IFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  328 (347)
Q Consensus       258 ~g~~~~~~~~~~~~~~l~~~~~~~~s-~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  328 (347)
                      ..+.+.++++.++..++++.+...+= ...-+..+.+.+.+++++||++++.+++|..+|+.|++......+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            34557778999999999999988874 445788899999999999999999999999999999988866543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.96  E-value=0.00015  Score=62.20  Aligned_cols=137  Identities=11%  Similarity=0.042  Sum_probs=112.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (347)
                      .-...+..+.+.+..+|+...+..|.+ .+..+--.-+..-+.+++++.+|+ ......  .  ...++......+..++
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pi-g~~~ag--~--~l~~p~ll~laLgvav  217 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPI-GAAQAG--P--ALFSPSLLPLALGVAV  217 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhh-hhhhcc--h--hhcChHHHHHHHHHHH
Confidence            445678889999999999999999999 446666677788899999999999 664311  1  2345566677777888


Q ss_pred             HH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           87 VG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        87 ~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +. ...+.+=..+++..+...-+++.++.|.+.++.++++++|++      |..||.++...+.+..-..
T Consensus       218 lSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~l------s~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         218 LSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETL------TLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHhccc
Confidence            88 889999999999999999999999999999999999999999      6669999998887765433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.90  E-value=7.1e-05  Score=57.11  Aligned_cols=69  Identities=17%  Similarity=0.249  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          259 AFFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       259 g~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      .+++.++++.++..++++.+...+ ++..-+..+.+.+.+++++||++++.+++|..+|+.|++..+..+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455677889999999999998887 445668889999999999999999999999999999999886644

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.88  E-value=0.00039  Score=63.48  Aligned_cols=130  Identities=12%  Similarity=0.119  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHhhhCC-c--hHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 019022          199 SVWYIIQTQTMKLYP-A--EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  275 (347)
Q Consensus       199 a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~l~  275 (347)
                      ..+.+.+++..++.. .  +..+++.++....+...+.........  .   ....+......++ ...++..+-+.+++
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al~   86 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            344567777776543 3  778888888888887777666554111  1   1223334444454 56678889999999


Q ss_pred             cCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCcccccCC
Q 019022          276 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK  334 (347)
Q Consensus       276 ~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~  334 (347)
                      +++...-.++....|+..++++++++|++.+..++++..++..|+.+....+.++++++
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            99999999999999999999999999999999999999999999998877655444433

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.85  E-value=0.00027  Score=55.63  Aligned_cols=116  Identities=15%  Similarity=0.199  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHH-HH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SF   90 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   90 (347)
                      +++.+++..++-+...++.|..++ ..+....... .    +   .. ......            ....+..|+.. ..
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~----~---~~-~~~~~~------------p~~~i~lgl~~~~l   60 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F----I---AA-LLAFGL------------ALRAVLLGLAGYAL   60 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H----H---HH-HHHHhc------------cHHHHHHHHHHHHH
Confidence            566777777777888888898863 4443332211 0    0   11 000011            11245666666 99


Q ss_pred             HHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHH--hhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           91 FRILGYTGIAYSSPTLASMIGNLTPGFTFILAII--FRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        91 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~--~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +..++..+++..+++.+..+....+.++.+.++.  ++||++      |..+++|+++.++|+.++.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l------s~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF------SLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999889888885  899999      6669999999999999876

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.75  E-value=0.00034  Score=61.73  Aligned_cols=133  Identities=12%  Similarity=0.026  Sum_probs=94.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL   86 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   86 (347)
                      .+..|+.+.++..++.+....++.|..   +++|....+=....-.+....+ ... .+  +  + ...+..++-++.|+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~-~~~-~~--~--~-~~~k~~~~nil~G~  203 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIF-NLF-SK--K--P-FFEKKSWKNILTGL  203 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHH-hhc-cc--c--c-ccccchHHhhHHHH
Confidence            345789999999999999988888875   6888776664443333333333 332 12  1  1 22334566788999


Q ss_pred             HHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhh
Q 019022           87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGA  151 (347)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv  151 (347)
                      +...++.+++.+.+..+.+.+-.+.++.++...+-+.+++||+=+.|+  -...++|+++.+.|.
T Consensus       204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGA  266 (269)
T ss_pred             HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999763321  112334444444444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.74  E-value=0.00079  Score=53.78  Aligned_cols=132  Identities=14%  Similarity=0.113  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHH
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  266 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  266 (347)
                      ...+++.++.+-++...++.++.++..++....+..+..+.+.+.......+..  ......+..|.  .++|-+.++..
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHH
Confidence            356788888999999999999998887799999999999999998888877653  22211222332  33455566677


Q ss_pred             HHHHHHHhccCCceeehhhh-hHHHHHHHHHHHH-H---hcCccchhhhhhHHHHHHhhhh
Q 019022          267 TVVHTFGLRMKGPVYTAIFK-PLSIAIAAITSFI-F---LSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       267 ~~~~~~~l~~~~~~~~s~~~-~l~pv~a~i~~~~-~---~ge~~~~~~~iG~~li~~g~~l  322 (347)
                      ..+.....++.+++....+. .-+.+.+.++|.+ +   -++++++.+++|..+++.|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            88888899999998876554 4466777888876 2   3467899999999999999764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.72  E-value=1.3e-05  Score=69.21  Aligned_cols=137  Identities=15%  Similarity=0.169  Sum_probs=96.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHH
Q 019022          183 RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFG  262 (347)
Q Consensus       183 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~  262 (347)
                      .-.+|..+...+ .++...++..++..+..  |.+.....+++-.++..|..+......  +-  ++..-.+++.=|+ .
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~v--~g--p~g~R~~LiLRg~-m  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQPV--IG--PEGKRKWLILRGF-M  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeeee--ec--CCCcEEEEEeehh-h
Confidence            445788888887 77788888888877664  454444444444444444333222211  11  1111122233333 3


Q ss_pred             HHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          263 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       263 ~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      +..+..+.++++++.+-+.+..+.+..|+++++++|++++|+.|....+|..+.+.|+++..+..
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            33677888899999999999999999999999999999999999999999999999999987754

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.72  E-value=0.012  Score=53.39  Aligned_cols=302  Identities=13%  Similarity=0.045  Sum_probs=180.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhh-hhhhccCC-CCCCCCchhHHHHHHHHH
Q 019022            8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLF-PFIFRSNT-ASLPLFKFPVISRICFLS   85 (347)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g   85 (347)
                      .-..+++...+..++-++.++-.|..  ++.+=...=.....++.+ ..|.+ ++..-.+. +.....+........+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            34568888888999999999999998  455433333333333332 33331 11111110 111234556677788899


Q ss_pred             HHHHHHHHHHHhhhhccChhhHHH-HhhhhHHHHHHHHHHhhhc--cccccccCcceeeehhhhhhhhhhhhhhccCccc
Q 019022           86 LVGSFFRILGYTGIAYSSPTLASM-IGNLTPGFTFILAIIFRME--NLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTI  162 (347)
Q Consensus        86 ~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~i~a~~~~~e--~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~  162 (347)
                      ++-......|-.+++|++.+..+- ...+..++-.++-.++.++  .+ ..++-....++|++++++|+.+.. ..|..-
T Consensus        81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g-~AG~~K  158 (344)
T PF06379_consen   81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICG-KAGSMK  158 (344)
T ss_pred             HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHh-HHHHhh
Confidence            988888889999999999998854 4667778877777776542  12 112335678899999999999887 333321


Q ss_pred             ccCCCCCcccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh-------hhCCchH----HHHHHHHHHHHHHHH
Q 019022          163 MSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTM-------KLYPAEF----VVTLLYCLFATIISA  231 (347)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~~  231 (347)
                      +..         .+...++.+..+|.++++.|++..|.++.-...-.       +...++.    ......+..+.+..+
T Consensus       159 e~~---------~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~  229 (344)
T PF06379_consen  159 EKE---------LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL  229 (344)
T ss_pred             hhh---------hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH
Confidence            111         11123455677999999999988888775443221       1011122    233444555666777


Q ss_pred             HHHHhccc---ccccccc----cC--chhHHHHHHHHHHHHHHHHHHHHHHhccCCce----eehhhhhHHHHHHHHHHH
Q 019022          232 PICFVGES---NLSAWRL----KP--DIELASIVYSAFFGLSFITVVHTFGLRMKGPV----YTAIFKPLSIAIAAITSF  298 (347)
Q Consensus       232 ~~~~~~~~---~~~~~~~----~~--~~~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~----~~s~~~~l~pv~a~i~~~  298 (347)
                      .++.+...   +...+..    .+  ..++..-+..|++-. ..+.+|-.+-.+++..    --.+.+.+..+++-+++.
T Consensus       230 ~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy-~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl  308 (344)
T PF06379_consen  230 IYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWY-SQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL  308 (344)
T ss_pred             HHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence            77765422   2211111    01  124444444555333 5666666666666643    335677778888888887


Q ss_pred             HHhcCc------cchhhhhhHHHHHHhhhhhhc
Q 019022          299 IFLSEA------LHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       299 ~~~ge~------~~~~~~iG~~li~~g~~l~~~  325 (347)
                      + ++|.      .-...++|+.+++.++.++-.
T Consensus       309 ~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  309 I-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             H-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            6 6763      334457888888888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.66  E-value=0.00019  Score=65.15  Aligned_cols=120  Identities=18%  Similarity=0.270  Sum_probs=88.2

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc-hHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHH
Q 019022          181 RSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPA-EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSA  259 (347)
Q Consensus       181 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g  259 (347)
                      +.++..|..+++.|+++.+....++|+..+|.+. +..-.                   ......  .-+..|    +.|
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-------------------~~~~~~--l~~~~W----~~G   56 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-------------------SGGRSY--LRRPLW----WIG   56 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-------------------chhhHH--HhhHHH----HHH
Confidence            3466789999999999999999999998776551 00000                   000000  001112    222


Q ss_pred             HHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          260 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      ....+++..+...++...+++.++++..+..++..+++..++||+++...++|+++++.|..+...
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            333445667778899999999999999999999999999999999999999999999999766543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.65  E-value=0.00026  Score=53.01  Aligned_cols=66  Identities=18%  Similarity=0.281  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          262 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       262 ~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      +.+.+|.+...++|+++...+ ++..-.-.+.+.+.+++++||++++.+++|..++++|+...+...
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            556789999999999988776 788888899999999999999999999999999999988876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.62  E-value=0.0011  Score=50.41  Aligned_cols=65  Identities=14%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          260 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      +.+.++++.+...++|+.+...+ ++..-+..+.+.+.+++++||++++.+++|..+|+.|+...+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34667889999999999998877 677778889999999999999999999999999999988753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.55  E-value=0.00043  Score=52.27  Aligned_cols=66  Identities=12%  Similarity=0.167  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          260 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      +.+.+.++.+...++|+.+...+ ++..-+..+.+.+.+++++||++++.+++|..+++.|+...+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            44667899999999999988877 6777788999999999999999999999999999999887654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.45  E-value=0.0026  Score=50.82  Aligned_cols=131  Identities=17%  Similarity=0.169  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 019022           14 TAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR   92 (347)
Q Consensus        14 ~~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   92 (347)
                      +..+.+.++-+....++-.. ++..+ |...+++-+..+++++..+ ....++  ...+..+.. .++.++-|++++...
T Consensus         4 lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~-~~~~~~--~~~~~~~~~-p~w~~lGG~lG~~~V   78 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLII-LLITGR--PSLASLSSV-PWWAYLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHH-HHHhcc--cccchhccC-ChHHhccHHHHHHHH
Confidence            45566666677777777666 35555 9999999999999998888 665433  221323323 345666999999999


Q ss_pred             HHHHhhhhccChhhHHHHhhhhHHHHHHHHHHh--h-hccccccccCcceeeehhhhhhhhhhh
Q 019022           93 ILGYTGIAYSSPTLASMIGNLTPGFTFILAIIF--R-MENLALSSLSTWAKIIGTLVSVSGAML  153 (347)
Q Consensus        93 ~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~--~-~e~~~~~~~~~~~~~~gi~l~~~Gv~l  153 (347)
                      .+....+...+++.+..+.-+.-+...++---+  + -||    ++.++.|+.|+++.++|+.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~----~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPK----RPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCC----CCCCHHHHHHHHHHHHHHhC
Confidence            999999999999999888776555555544432  1 122    23377899999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.31  E-value=0.002  Score=47.68  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHH
Q 019022          260 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVIT  316 (347)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li  316 (347)
                      +.+.++++.++.+++|+.+.+.+ ++..-+..+...+.+.+++||++|+.+++|..+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34677889999999999999988 5566789999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.26  E-value=0.0088  Score=47.91  Aligned_cols=139  Identities=9%  Similarity=0.082  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHH
Q 019022          186 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  265 (347)
Q Consensus       186 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~  265 (347)
                      ....+++.++.+-.+......++.+..++|....+..+..+.+.+..+.++.++. ..+....+..|.. ..-|+ ..+.
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~-~~GG~-lGa~   81 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWA-WIGGL-LGAI   81 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHH-HHccc-hhhh
Confidence            4677888899999999999999988877799999999999999998888885443 2222222223322 22233 3323


Q ss_pred             HHHHHHHHhccCCcee-ehhhhhHHHHHHHHHHHHHhc----CccchhhhhhHHHHHHhhhhhhccC
Q 019022          266 ITVVHTFGLRMKGPVY-TAIFKPLSIAIAAITSFIFLS----EALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       266 ~~~~~~~~l~~~~~~~-~s~~~~l~pv~a~i~~~~~~g----e~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      -...-....++.+++. ......-+.+.+.++|.+=+.    .+++...++|.+++++|+++..+++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            2333344456665554 455666677888888877554    5689999999999999965555443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.22  E-value=0.004  Score=47.35  Aligned_cols=68  Identities=12%  Similarity=-0.006  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhccChhhHHH-HhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhh
Q 019022           81 ICFLSLVGSFFRILGYTGIAYSSPTLASM-IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (347)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  154 (347)
                      ....-++...++.++..++++.|.+.+-. -....-+.+.+++.+++||++      ++.|+.|+.+.+.|++.+
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~------~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL------NRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHh
Confidence            33344444788889999999999999854 567899999999999999999      667999999999999775

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.19  E-value=0.0015  Score=57.53  Aligned_cols=79  Identities=13%  Similarity=0.148  Sum_probs=67.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCccc
Q 019022          251 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  330 (347)
Q Consensus       251 ~~~~ll~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~  330 (347)
                      +......-++ ..++...+.+.++++.+|+...++...+.+++.++++++++++++..||++..+.+.|+.+........
T Consensus        16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3444444444 466788899999999999999999999999999999999999999999999999999999877665544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.13  E-value=0.0012  Score=51.08  Aligned_cols=68  Identities=18%  Similarity=0.194  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhccChhhHHHH-hhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           82 CFLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        82 ~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      .+.-++.+.++.++..++++.+.+.+-.+ ....-+.+.+++.+++||++      +..++.|+.+.+.|++.+-
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~------s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL------SLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHhh
Confidence            33334448889999999999999999666 57999999999999999999      6669999999999998875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.08  E-value=0.0014  Score=49.06  Aligned_cols=68  Identities=12%  Similarity=0.062  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhccChhhH-HHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           82 CFLSLVGSFFRILGYTGIAYSSPTLA-SMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        82 ~~~g~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +..-++...++.++..++++.+.+.+ ++-.....+.+.+.+++++||++      +..+++++.+.++|++.+-
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l------~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL------SLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC------CHHHHHHHHHHHHHHHHhh
Confidence            33334447788899999999999998 55577999999999999999999      6669999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.94  E-value=0.003  Score=47.69  Aligned_cols=67  Identities=12%  Similarity=-0.055  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHhhhhccChhhHHH-HhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           83 FLSLVGSFFRILGYTGIAYSSPTLASM-IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        83 ~~g~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ..-++...++.++..+++..|.+.+-. -.....+.+.+++.+++||++      ++.++.|+.+.+.|++.+-
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~------~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA------SPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHhhh
Confidence            333344888889999999999999855 466999999999999999999      6679999999999998764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.91  E-value=0.00062  Score=58.35  Aligned_cols=137  Identities=12%  Similarity=0.051  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHH
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  266 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  266 (347)
                      +.+++++=++.|+..-....+..   ..|.+-..-..+.+.++.+.+.++..+ ..     +...+..-...|.+.+ ++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G---G~p~qQ~lGtT~GALifaiiv~~~~~p-~~-----T~~~~iv~~isG~~Ws-~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG---GKPYQQTLGTTLGALIFAIIVFLFVSP-EL-----TLTIFIVGFISGAFWS-FG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC---CChhHhhhhccHHHHHHHHHHheeecC-cc-----chhhHHHHHHhhhHhh-hh
Confidence            45778888888887665555432   225554444444444444444443222 11     2223444445555444 78


Q ss_pred             HHHHHHHhccCCceeehhhhh-HHHHHHHHHHHHHhcCccchhhh----hhHHHHHHhhhhhhccCcccccC
Q 019022          267 TVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLWGKANDEAG  333 (347)
Q Consensus       267 ~~~~~~~l~~~~~~~~s~~~~-l~pv~a~i~~~~~~ge~~~~~~~----iG~~li~~g~~l~~~~~~~~~~~  333 (347)
                      +...+++++..+++++.+++. .+-+-+.+++.+.+||..+..+.    +..++++.|+++..++++.++++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~  144 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE  144 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc
Confidence            999999999999999988765 56777889999999999988765    45667778888877666544433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.90  E-value=0.003  Score=48.19  Aligned_cols=62  Identities=19%  Similarity=0.168  Sum_probs=55.4

Q ss_pred             HHHHHHHHHhhhhccChhhHHHH-hhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           88 GSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        88 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ...++.++..+++..|.+.+-.+ ....-+.+.+++++++||++      ++.++.|+.+.+.|++.+-
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~------~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            37788889999999999999666 66899999999999999999      6679999999999998875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.87  E-value=0.034  Score=51.25  Aligned_cols=147  Identities=11%  Similarity=-0.009  Sum_probs=93.2

Q ss_pred             ccchhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChhHHHHHHHH---HHHHHHH-hhhhhhh-ccCCCC----C
Q 019022            7 YKNGALFTAMVAAECTIVGEN-------IIFKLATSKGMSYFVFVFYSYA---ATTLVLL-LLFPFIF-RSNTAS----L   70 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~-------~~~k~~~~~~~~p~~~~~~r~~---~~~l~l~-~~~~~~~-~~~~~~----~   70 (347)
                      .+..|+.+.++++.+..+..+       +..+.+...+.+|.....-.+.   .+.++.- .+ +.+. +++++.    .
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~-~~~~~~k~~~~~~~~~  248 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGF-CFIRLAKNKDLSLKAD  248 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCcccchh
Confidence            345789999999999999988       6666654457777766655554   4443333 33 3432 232121    0


Q ss_pred             CCCchhHHHH----HHHHHHHHHHHHHHHHhhhhccChhhHHH---Hh-hhhHHHHHHHHHHhhhccccccccCcceeee
Q 019022           71 PLFKFPVISR----ICFLSLVGSFFRILGYTGIAYSSPTLASM---IG-NLTPGFTFILAIIFRMENLALSSLSTWAKII  142 (347)
Q Consensus        71 ~~~~~~~~~~----~~~~g~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~  142 (347)
                      +..+++.+.+    ..+.|++....+.++..+-...+.+.+..   +. ++..++..+-+. ++||+=...+|..+.-++
T Consensus       249 ~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        249 FSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence            1112222233    36667777888888999888886665555   55 445566666666 699976544455566788


Q ss_pred             hhhhhhhhhhhhh
Q 019022          143 GTLVSVSGAMLVV  155 (347)
Q Consensus       143 gi~l~~~Gv~li~  155 (347)
                      |+++.+.|+.++.
T Consensus       328 G~vliI~g~~lig  340 (345)
T PRK13499        328 GCVVIILAANIVG  340 (345)
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.81  E-value=0.0032  Score=47.95  Aligned_cols=110  Identities=15%  Similarity=0.117  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 019022           17 VAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGY   96 (347)
Q Consensus        17 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   96 (347)
                      ++..++||.+.++.|... ++.++..-.. +..-... .  +   . ++            + ++..-=.++-.+...|+
T Consensus         2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~-~--L---l-~n------------~-~y~ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIK-F--L---L-LN------------P-KYIIPFLLNQSGSVLFF   59 (113)
T ss_pred             eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHH-H--H---H-Hh------------H-HHHHHHHHHHHHHHHHH
Confidence            456789999999999995 5665554431 2111111 0  0   0 11            2 22222233466677888


Q ss_pred             hhhhccChhhHHHHh-hhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhh
Q 019022           97 TGIAYSSPTLASMIG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (347)
Q Consensus        97 ~al~~~~~~~~~~l~-~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  154 (347)
                      +.+...+.|.+..+. ++.=++|++.++++.+|..      ++++++|+++.+.|+.+.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~------~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVI------SRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCccc------chhHHHHHHHHHcCeeee
Confidence            999999999998885 7888999999988777766      555899999999998764

Many members are annotated as potential transmembrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.73  E-value=0.087  Score=48.01  Aligned_cols=137  Identities=12%  Similarity=0.043  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHhhhCC---chHHHHHHHHHHHHHHHHHHHHhcccc-----cccc---cccCchhHHHHHHHHHHHH
Q 019022          195 NLLISVWYIIQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGESN-----LSAW---RLKPDIELASIVYSAFFGL  263 (347)
Q Consensus       195 ~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~ll~~g~~~~  263 (347)
                      .+.++......|...++.+   .+.+..+..-++-.+++....+..+..     ....   ....+.+...+..-++ ..
T Consensus        24 t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~-iY  102 (345)
T KOG2234|consen   24 TAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPAL-IY  102 (345)
T ss_pred             HHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHH-HH
Confidence            3444555555555443321   366777777777777777766655311     0000   0001112333333233 44


Q ss_pred             HHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCccccc
Q 019022          264 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA  332 (347)
Q Consensus       264 ~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~  332 (347)
                      ++-..+++.++.+.+|+...+...+..+.+.++..++++++++..||...++.+.|+.++.....++..
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            556678899999999999999999999999999999999999999999999999999998854444433

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.72  E-value=0.016  Score=50.98  Aligned_cols=187  Identities=14%  Similarity=0.071  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF   91 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   91 (347)
                      |+++.+.+.+++|++++-.|..  +.-|++.+..+-.....+.-+.. .+. +.   . ++.    .+...+.|.+.+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v-~~~-~~---~-p~f----~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVV-NLI-LG---F-PPF----YPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHH-HHh-cC---C-Ccc----eeHHHhhhhhhhcC
Confidence            4677899999999999999998  35688888877776666655555 443 22   2 222    34567777888999


Q ss_pred             HHHHHhhhhccChhhHHHHhhhhHHHHH-HHHHH-hhhccccccccCcceeeehhhhhhhhhhhhhhccCccccc-----
Q 019022           92 RILGYTGIAYSSPTLASMIGNLTPGFTF-ILAII-FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS-----  164 (347)
Q Consensus        92 ~~~~~~al~~~~~~~~~~l~~~~pi~~~-i~a~~-~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~g~~~~~-----  164 (347)
                      +.+..-.++..+.+.+..+-++.-+.+- ..+++ +++++.+. -..++...+|++++++|..+..+-+.+....     
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~-~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~  147 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQV-PSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSE  147 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccc-cchhHHHHHHHHHHHHHHHheeeecCCCCCcccccc
Confidence            9999999999999999999887554444 33333 33332211 1227788999999999988877533332110     


Q ss_pred             ---CCCCC-cccCCC----CCCC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019022          165 ---TASIP-AQSLHW----TPQS------TRSRWVIGGLLLLISNLLISVWYIIQTQTMKL  211 (347)
Q Consensus       165 ---~~~~~-~~~~~~----~~~~------~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~  211 (347)
                         .+..+ .+..++    .+.+      .......|..+++.+++.|+...+=.....++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  148 ETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence               00000 000000    0011      11246789999999999998877666555444

The region concerned is approximately 280 residues long.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.61  E-value=0.045  Score=43.88  Aligned_cols=139  Identities=14%  Similarity=0.046  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHhhhhhhh-ccCCCCCCCCchhHHHHHHHHHHH
Q 019022           10 GALFTAMVAAECTIVGENIIFKLATSKGM-SYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLV   87 (347)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~   87 (347)
                      ....+..+.+.++-.....++-... +.. +|..-.+.-+..++.++..+ .... ++  .. ....++..++.++-|++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~-~~~~spl~As~isf~vGt~~L~~l-~l~~~~~--~~-~a~~~~~pwW~~~GG~l   78 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLA-RYLGSPLLASLISFLVGTVLLLIL-LLIKQGH--PG-LAAVASAPWWAWIGGLL   78 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHHHH-HHHhcCC--Cc-hhhccCCchHHHHccch
Confidence            3445556666666666666665553 344 59999999999999988888 6653 22  22 22224445678888888


Q ss_pred             HHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhh
Q 019022           88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (347)
Q Consensus        88 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  154 (347)
                      ++.+-+.-.......+++....+.-..-+...++--.|.--.. .+++++..++.|+++.++|+.++
T Consensus        79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~-~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV-PKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-CcCCCCHHHHHHHHHHHHHHHHh
Confidence            8888887788888888888877766666655555554432222 33467999999999999995443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.35  E-value=0.015  Score=44.32  Aligned_cols=107  Identities=12%  Similarity=0.034  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 019022          194 SNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFG  273 (347)
Q Consensus       194 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~  273 (347)
                      -+++|+..+.+.|+..+..++...-.  +..-. ...    ...             .|-..+  .+.....+...|++.
T Consensus         4 Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~-~~~----Ll~-------------n~~y~i--pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    4 VGILWGCTNPFIKRGSSGLEKVKASL--QLLQE-IKF----LLL-------------NPKYII--PFLLNQSGSVLFFLL   61 (113)
T ss_pred             ehHHhcCchHHHHHHHhhcCCccchH--HHHHH-HHH----HHH-------------hHHHHH--HHHHHHHHHHHHHHH
Confidence            46789999999999887655111111  11111 111    000             111111  222344677888899


Q ss_pred             hccCCceeehhh-hhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhh
Q 019022          274 LRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  322 (347)
Q Consensus       274 l~~~~~~~~s~~-~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l  322 (347)
                      +.+.+-+.+.++ +.+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            999999999988 5899999999998877777888999999999999765

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.33  E-value=0.01  Score=53.87  Aligned_cols=139  Identities=13%  Similarity=0.174  Sum_probs=109.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHH---hCCCChhHHHHHHHHHHHHHHH-hhhhhhhccCCC---CCCCCchhHHHHH
Q 019022            9 NGALFTAMVAAECTIVGENIIFKLAT---SKGMSYFVFVFYSYAATTLVLL-LLFPFIFRSNTA---SLPLFKFPVISRI   81 (347)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~k~~~---~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (347)
                      +..|......+.+..+...++.|..+   ++.++++....+-.-.+...++ |+ ......+..   .....+.. ....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~-~~~~~~~~~~~~~~~~~~~~-~~~~  238 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPF-LDYVEGNKFVGFLTAPWFVT-FLIL  238 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcch-Hhhhcccceeeeeccccchh-hHHH
Confidence            56788999999999999999999998   3359999988888888888888 77 554322111   10122223 3334


Q ss_pred             HHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           82 CFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        82 ~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      .+..++....|...|..+..++|-.-++....--+.+...++++++|++      +..+..|.++++.|+.+-.
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pv------t~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPV------TFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCC------chhhHHHHHHHHHHHHHHH
Confidence            4444777888999999999999999999999999999999999999988      6679999999999998754

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.07  E-value=0.016  Score=42.89  Aligned_cols=54  Identities=13%  Similarity=-0.014  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHhhhhccChhhHHH-HhhhhHHHHHHHHHHhhhccccccccCcceeeehhhh
Q 019022           87 VGSFFRILGYTGIAYSSPTLASM-IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLV  146 (347)
Q Consensus        87 ~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l  146 (347)
                      +...+..++..++++.+.+.+-. ...+..+.+.+.+.+++||++      +..|+.|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~------s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL------SLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHhheee
Confidence            44788889999999999999955 567999999999999999999      6668888765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.57  E-value=0.066  Score=49.04  Aligned_cols=140  Identities=14%  Similarity=0.114  Sum_probs=103.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHhhhhhhh---ccCCCCCCCCchhHHHH
Q 019022            7 YKNGALFTAMVAAECTIVGENIIFKLATSKG---MSYFVFVFYSYAATTLVLLLLFPFIF---RSNTASLPLFKFPVISR   80 (347)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~   80 (347)
                      .+...|-++.++.++++|...++.|.-.+++   ++--.+-.+--++..++++|. .+..   +.  ++..-.+..+.-.
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~-l~iL~~~~~--e~F~lP~~~q~~~  319 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPP-LIILDFFGE--ERFELPSSTQFSL  319 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHH-HHHHHHhcc--CcccCCCCceeEe
Confidence            3457899999999999999999999886332   555556666666777777766 4332   33  3322223345556


Q ss_pred             HHHHHHHH-HHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           81 ICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        81 ~~~~g~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +++.++++ ++..++|..|.-.+++-.+++-..++....++.=.++.+.++      ++..++|....++|-+++.
T Consensus       320 vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~------S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  320 VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP------SALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHhhee
Confidence            78888888 999999999999999999988777655555555555545555      8889999999999988876

>TIGR00803 nst UDP-galactose transporter

Probab=94.71  E-value=0.17  Score=43.76  Aligned_cols=67  Identities=10%  Similarity=0.104  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhh
Q 019022           81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML  153 (347)
Q Consensus        81 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l  153 (347)
                      .+...++.+....+....++|.++..-+....+.++++.+++.++++|++      +..++.|+.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~l------s~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKI------SSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc------cHHHHHHHHHHHeeeEe
Confidence            44444555777788999999999999999999999999999999999998      66699999999888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.14  E-value=0.026  Score=50.57  Aligned_cols=121  Identities=20%  Similarity=0.275  Sum_probs=89.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHH
Q 019022          181 RSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAF  260 (347)
Q Consensus       181 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~  260 (347)
                      ..++..|..+++.|.++.+....+.|+..+|.. .                  .....+ ...... - .+  ..-+.|.
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~------------------~~~ra~-~gg~~y-l-~~--~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A------------------SGLRAG-EGGYGY-L-KE--PLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h------------------hccccc-CCCcch-h-hh--HHHHHHH
Confidence            455667999999999999999998888877754 0                  001111 111110 0 11  1225566


Q ss_pred             HHHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          261 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      +..+++-..-+.+....+++.++++..++.+..++++..+++|+++....+|+++.++|..+...
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            66677788888888889999999999999999999999999999999999999999999655443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.95  E-value=0.065  Score=45.90  Aligned_cols=75  Identities=15%  Similarity=0.194  Sum_probs=67.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhh
Q 019022           75 FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV  154 (347)
Q Consensus        75 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li  154 (347)
                      +..++.+.+.++++++++.+.+.-+.+-+|-.-+++..+--+|+.+++.++++.++      +.+||+|..+.+.|...=
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npl------s~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPL------SGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHHhhhH
Confidence            34577889999999999999999999999999999999999999999999999999      556999999999987664


Q ss_pred             h
Q 019022          155 V  155 (347)
Q Consensus       155 ~  155 (347)
                      .
T Consensus       312 ~  312 (337)
T KOG1580|consen  312 V  312 (337)
T ss_pred             h
Confidence            4

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.92  E-value=0.56  Score=42.83  Aligned_cols=142  Identities=13%  Similarity=0.097  Sum_probs=87.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhc-cccc-ccccccCchhHHHHHHHH
Q 019022          182 SRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVG-ESNL-SAWRLKPDIELASIVYSA  259 (347)
Q Consensus       182 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~ll~~g  259 (347)
                      .+...|.++..+++++.+.+++=.||. |+-+ =+++=..+.+++-++.-...... -++. +.....+...+......|
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            445789999999999999999988876 4433 33333334444444332222222 2221 112222334555556667


Q ss_pred             HHHHHHHHHHHHHHhccCCceee-hhhhhHHHHHHHHHHHHHhcC-------ccchhhhhhHHHHHHhhhhhhcc
Q 019022          260 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSE-------ALHLGSVIGGVITCVGFYTVLWG  326 (347)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pv~a~i~~~~~~ge-------~~~~~~~iG~~li~~g~~l~~~~  326 (347)
                      ++-. ++-..|-.++|+++.+.. ++..-+..+++.++--++.|+       +-....++|.++.+.|+.+.-+.
T Consensus        81 ~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   81 VLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            7554 677888889999987765 455555666666665555442       22346789999999998886653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.09  E-value=0.05  Score=45.29  Aligned_cols=63  Identities=10%  Similarity=0.116  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          265 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       265 ~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      .+...|..++++++|+.++.+..-.-.+..+++++++|+++....++..++.+.|+++..+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            467889999999999999999999999999999999999999999999999999988876543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.91  E-value=2.7  Score=37.76  Aligned_cols=141  Identities=12%  Similarity=-0.005  Sum_probs=104.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHhhhhhhhccCCCC--CCCCchhHHHHHHHH
Q 019022            8 KNGALFTAMVAAECTIVGENIIFKLATSK-GMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS--LPLFKFPVISRICFL   84 (347)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   84 (347)
                      +...|+.++.....+=|.....=+..+.+ .+++..+.+.-.+..++.-... .......++.  .-...++.++.+++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            55667777777777777777766666533 5888888887777776665444 2221110111  012345678889999


Q ss_pred             HHHHHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        85 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      +.+++.++.+.|+-++.-++-.-+.+.-+=-++..+++.+.++.++      +..||.|+.+.+.|..+=.
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~------s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPL------SSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCcc------chhhccCeeeehHHHHHHH
Confidence            9999999999999998888877788888889999999999999999      5569999999998887644

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=92.87  E-value=0.22  Score=43.94  Aligned_cols=129  Identities=9%  Similarity=-0.004  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHH
Q 019022          187 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  266 (347)
Q Consensus       187 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  266 (347)
                      |.+.++.|+++++-..+=.|+....  |++.+..+.+....+..+....+.+.+.. +   +     + .++|-.--+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f-~---p-----~-amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPF-Y---P-----W-AMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcc-e---e-----H-HHhhhhhhhcC
Confidence            4567788889999888877765422  57666666666655555555554433211 1   1     1 11111111223


Q ss_pred             HHHHHHHhccCCceeeh-hhhhHHHHHHHHHHHH-HhcCc---c--chhhhhhHHHHHHhhhhhhccC
Q 019022          267 TVVHTFGLRMKGPVYTA-IFKPLSIAIAAITSFI-FLSEA---L--HLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       267 ~~~~~~~l~~~~~~~~s-~~~~l~pv~a~i~~~~-~~ge~---~--~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      ..+-.-.+++++-...- +......+.+...+.+ ++|+.   +  ....++|+++++.|..+...-|
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik  136 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK  136 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence            33333344444443332 2233455666666654 45543   3  3578999999999977765433

The region concerned is approximately 280 residues long.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=90.55  E-value=1.1  Score=38.36  Aligned_cols=136  Identities=14%  Similarity=0.151  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCCCChhHHHHHHHHHHHHHHHhhhhhhhccCCCC---CCCCchhHHHHHHHHHHH
Q 019022           12 LFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS---LPLFKFPVISRICFLSLV   87 (347)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~   87 (347)
                      |+++|....+.-+......|.-. -.+..-++..++..+.+..+++.+ .+.. +++..   ....+....-..++.|++
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~-s~~~-edws~~n~annl~~d~l~am~ISgl~  233 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSF-SFLF-EDWSPGNLANNLSVDSLMAMFISGLC  233 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHH-HHHh-ccCCcchhhcCCChHHHHHHHHHHHH
Confidence            44455555555555555555553 135677888999999999998888 6664 21111   122334445578888888


Q ss_pred             HHHHHHHHHhhhhccChhhHHHHhhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        88 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      .++-.++.-+.++-++....+++-++.-.-.++.+.++++|+.      +..++..+++++....+-.
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~------nf~si~sillGflsg~iYa  295 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPV------NFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCch------hHHHHHHHHHHHHHHHHHH
Confidence            8888889999999999999999999999999999999999988      5568888888877665544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.44  E-value=8.5  Score=34.88  Aligned_cols=118  Identities=13%  Similarity=0.169  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHhhhCC--chHHHHHHHHHHHHHHHHHHHHhcc--cccccccccCchhHHH--HHHHHHHHHHHHHHHHHH
Q 019022          199 SVWYIIQTQTMKLYP--AEFVVTLLYCLFATIISAPICFVGE--SNLSAWRLKPDIELAS--IVYSAFFGLSFITVVHTF  272 (347)
Q Consensus       199 a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--ll~~g~~~~~~~~~~~~~  272 (347)
                      -+-.+..|.....++  ........+.+.+.+.....-...-  .+..++.  ...-|.-  +++.+      ....=.+
T Consensus        25 ~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~--~~kk~~P~~~lf~~------~i~t~~~   96 (314)
T KOG1444|consen   25 ILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLR--TAKKWFPVSLLFVG------MLFTGSK   96 (314)
T ss_pred             HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChH--HHHHHccHHHHHHH------HHHHccc
Confidence            444567777776665  3334555777777766665544322  1222221  1222222  22222      2223346


Q ss_pred             HhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhh
Q 019022          273 GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  324 (347)
Q Consensus       273 ~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~  324 (347)
                      ++++.+.....++....|++..+....++|-+++...+.....+++|.....
T Consensus        97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            7899999999999999999999999999999999999999999998866643

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.15  E-value=0.76  Score=40.68  Aligned_cols=64  Identities=14%  Similarity=0.132  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhccCCceeehhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhc
Q 019022          262 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  325 (347)
Q Consensus       262 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~  325 (347)
                      |-..+..+.+.++...+++..-++.-...++.-+++.-+++.+++..||+|...+.+|+..+-.
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            6667788888899999999999999999999999999999999999999999999999777543

>PRK02237 hypothetical protein; Provisional

Probab=83.27  E-value=6.7  Score=29.50  Aligned_cols=45  Identities=16%  Similarity=0.187  Sum_probs=38.0

Q ss_pred             hhhhhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          283 AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       283 s~~~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      +...-...+.+.++++.+-|++|+...++|..+.+.|+.+.....
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            455666778889999999999999999999999999987765543

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=81.30  E-value=55  Score=32.43  Aligned_cols=17  Identities=12%  Similarity=-0.033  Sum_probs=8.9

Q ss_pred             hhhhHHHHHHHHHHHHH
Q 019022          284 IFKPLSIAIAAITSFIF  300 (347)
Q Consensus       284 ~~~~l~pv~a~i~~~~~  300 (347)
                      ......|+-+.++|.+.
T Consensus       351 ~~~g~~~lGsll~G~la  367 (524)
T PF05977_consen  351 VFFGGMPLGSLLWGFLA  367 (524)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            34444555556666553

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	347
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.07
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.73
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.21
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.17

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.07  E-value=2.1e-10  Score=90.07  Aligned_cols=72  Identities=14%  Similarity=0.175  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceeehhh-hhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccCc
Q 019022          257 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  328 (347)
Q Consensus       257 ~~g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~  328 (347)
                      .++++++++++.+|++++++.+++.+..+ ..+.|+++++++++++||++++.+++|+.+|+.|+++....++
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            46677899999999999999999999998 8999999999999999999999999999999999998876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.73  E-value=3.5e-08  Score=74.69  Aligned_cols=71  Identities=14%  Similarity=0.180  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceeehhh-hhHHHHHHHHHHHHHhcCccchhhhhhHHHHHHhhhhhhccC
Q 019022          257 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  327 (347)
Q Consensus       257 ~~g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pv~a~i~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~  327 (347)
                      ..++++.++++.++.+++|+.+.+.+..+ ..+.|+++.+.+++++||++++.+++|..+|+.|++.....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            46666888999999999999999999888 899999999999999999999999999999999998887644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.21  E-value=3.3e-06  Score=63.75  Aligned_cols=67  Identities=18%  Similarity=0.186  Sum_probs=60.0

Q ss_pred             HHHHHH-HHHHHHHHhhhhccChhhHHHH-hhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhh
Q 019022           83 FLSLVG-SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV  155 (347)
Q Consensus        83 ~~g~~~-~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~  155 (347)
                      ..+.+. ..++.++..++++.+.+.+..+ ..+.|+++.+++++++||++      +..++.|+.+.+.|+.++.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~------s~~~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLIIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence            344444 8889999999999999999888 89999999999999999999      6669999999999998886

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.17  E-value=2e-06  Score=67.33  Aligned_cols=68  Identities=19%  Similarity=0.203  Sum_probs=51.2

Q ss_pred             HHHHHH-HHHHHHHHhhhhccChhhHHHH-hhhhHHHHHHHHHHhhhccccccccCcceeeehhhhhhhhhhhhhh
Q 019022           83 FLSLVG-SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL  156 (347)
Q Consensus        83 ~~g~~~-~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~a~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~  156 (347)
                      +.+++. +.++.++..++++.+++.+..+ .++.|++++++++++++|++      +..+++|+++.+.|+.++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~l------s~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHhc
Confidence            344444 8899999999999999999888 89999999999999999999      66799999999999998873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00