Citrus Sinensis ID: 019070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Secondary Structure (PSIPRED)
cccccEEEcccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHccccccccccccccccccccEEHccHcccccccccHHHHHccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHcccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggpptttklrkfwggekedpltsdefiwnndfmpRMKRLIEdtdessaekfpvqeepsgflslnrvmslDSLEVDLSKELTADSKTALQQPVEAAIQDSqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelrkprgdpevlAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKglmkgavgqprlLVPVVLVMIYNrwneitvpeygfLHLELIPMLVGFFTYKIATFFQAVEEAVSIvekkdpdiv
Flexible Loop (DISEMBL)
mavlnyipvtatsapisqdssstsssvpttrptkillpkkksmkwstgvapgeyggppttTKLRKFWGGekedpltsdefiwnndFMPRMKRLIEDTDESsaekfpvqeepsgflslnRVMSLDSLEVDLSKELTADSKTALQQPVEAaiqdsqqksgsvprkwrlaptrreqdkwdkatkaatggsdvmfrelRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLmkgavgqprLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAvsivekkdpdiv
Low Complexity Region (SEG)
MAVLNYIPVTAtsapisqdssstsssvpttrptKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIaasfaagllgslVYIRMLGSTVDSmaagakglmkgavgQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered region (IsUnstruct)
***************************************************************RKFWG*******TSDEFIWNNDFM***************************************************************************************************************************QYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIV********
Disordered Region (DISOPRED)
*AVLNYIPVT*******************************************YGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRM***************************NRVMSLDSLEVDL**********************************************************************************FKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV*******************LLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV***********
Disordered Region (DISEMBL)
MAVLNYIPVTATSA*****************PTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED**************PSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVE***************KWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Disordered Region (DISPRO)
MAVLNYIPVTATS*****************RPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIED*********************NRVMSLDSLEVDLSKELTADSKT****PVEAAIQ*************R**P*RREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAG********VGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSI*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
P08443	118	ATP synthase protein I OS	yes	no	0.317	0.932	0.312	3e-08
P12403	122	ATP synthase protein I OS	yes	no	0.317	0.901	0.288	1e-06
Q05376	115	ATP synthase protein I OS	N/A	no	0.289	0.869	0.269	2e-06

>sp|P08443|ATPZ_SYNP6 ATP synthase protein I OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpI PE=3 SV=1

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 15/125 (12%)

Query: 211 QYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAG 270
           +Y+ L+ +L  +TL    V   + + +YS   AAS+  G +G L+Y+RMLG  V+ +   
Sbjct: 3   EYYALQRQLLQVTLICTVVIFGAVWWAYSLNTAASYLLGAMGGLLYLRMLGKAVERI--- 59

Query: 271 AKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQA 330
             G  +   G+ RL + VVL+++  RW           +LEL+P+ +GF TYK A  +  
Sbjct: 60  --GERRRQFGKSRLALFVVLIVLAARWQ----------YLELMPVFLGFLTYKAALIWYT 107

Query: 331 VEEAV 335
           +   +
Sbjct: 108 LRAVI 112

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

>sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)

Query: 210 EQYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAA 269
           +++++L  +L  +TL + GV  +S +I YS  IA ++  G    +VY+RML   V+ +  
Sbjct: 2   QEFYQLYQELVLITLVLTGVVFISVWIFYSLNIALNYLLGACTGVVYLRMLAKDVERL-- 59

Query: 270 GAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQ 329
              G  K ++ + RL + + L+++ +RWN+          L+++P+ +GF TYK      
Sbjct: 60  ---GREKQSLSKTRLALLMALILLASRWNQ----------LQIMPIFLGFLTYKATLIIY 106

Query: 330 AVEEA 334
            V  A
Sbjct: 107 VVRVA 111

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q05376|ATPZ_SYNP1 ATP synthase protein I OS=Synechococcus sp. (strain PCC 6716) GN=atpI PE=3 SV=2

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 15/115 (13%)

Query: 211 QYFKLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAG 270
           ++++L  +L   +L +  +   + ++ Y    A ++  G   SL+Y+R+L   V+ +   
Sbjct: 3   EFYQLCRELFTTSLVLMAIAFGTVWVIYDLNTALNYLLGASASLIYLRLLARNVERLGHD 62

Query: 271 AKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIA 325
            K L     G+ +LLV V ++++  RW+E          L +IP+ +GF TYK A
Sbjct: 63  QKKL-----GKTQLLVVVAVIILAARWHE----------LHIIPVFLGFLTYKAA 102

A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.

Synechococcus sp. (strain PCC 6716) (taxid: 32048)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
255575275	361	conserved hypothetical protein [Ricinus	0.973	0.933	0.742	1e-145
225446613	338	PREDICTED: uncharacterized protein LOC10	0.962	0.985	0.735	1e-143
147770695	338	hypothetical protein VITISV_018738 [Viti	0.962	0.985	0.732	1e-142
118489593	343	unknown [Populus trichocarpa x Populus d	0.973	0.982	0.710	1e-138
21593011	350	unknown [Arabidopsis thaliana]	0.968	0.957	0.688	1e-136
18402535	350	ATP synthase protein I [Arabidopsis thal	0.968	0.957	0.686	1e-135
297826533	350	hypothetical protein ARALYDRAFT_482029 [	0.979	0.968	0.676	1e-134
388496336	340	unknown [Lotus japonicus]	0.976	0.994	0.666	1e-129
449465218	338	PREDICTED: uncharacterized protein LOC10	0.962	0.985	0.675	1e-127
357474593	341	ATP synthase protein I [Medicago truncat	0.968	0.982	0.659	1e-126

>gi|255575275|ref|XP_002528541.1| conserved hypothetical protein [Ricinus communis] gi|223532043|gb|EEF33853.1| conserved hypothetical protein [Ricinus communis]

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/342 (74%), Positives = 290/342 (84%), Gaps = 5/342 (1%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTT-RPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+LNYI VT+T+APISQDSS+         R TK++LPKKK +KWSTGVAPG+YGGPPT
Sbjct: 1   MAILNYISVTSTAAPISQDSSTPPPPQIPDPRQTKVILPKKKPLKWSTGVAPGDYGGPPT 60

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE EDPLTSDEFIWN DFM RMKRL++D D  S E   VQEE SGFLSLNR
Sbjct: 61  TTKLRKYWGGEDEDPLTSDEFIWNKDFMSRMKRLVQDPDIPSLEPTSVQEESSGFLSLNR 120

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLD+LEVDL+KEL    K   +   EAA + S     ++  KWRLAPTRREQ+KWDKA
Sbjct: 121 VMSLDNLEVDLTKELMRTPKLVPKVSAEAATKGSD----TIATKWRLAPTRREQEKWDKA 176

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYS 239
           TKAATGGSDV+ RE+RKPRGDPE+LAAQS+EQYFKLK+KLQ LTLG+GGVGLVSAYISYS
Sbjct: 177 TKAATGGSDVLLREIRKPRGDPELLAAQSREQYFKLKNKLQILTLGVGGVGLVSAYISYS 236

Query: 240 PEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 299
           PEIAASF AGL+GSLVY+RMLGS++DSMA GAKGL+KGA+GQPRLLVPVVLVMIYNRWN 
Sbjct: 237 PEIAASFGAGLIGSLVYMRMLGSSIDSMADGAKGLIKGAIGQPRLLVPVVLVMIYNRWNG 296

Query: 300 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 341
           I VP+YG +HLELIPMLVGFFTYKIATF QA+EEAV++  +K
Sbjct: 297 ILVPDYGLMHLELIPMLVGFFTYKIATFVQAIEEAVTVAVEK 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446613|ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243760 [Vitis vinifera] gi|302143424|emb|CBI21985.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/340 (73%), Positives = 291/340 (85%), Gaps = 7/340 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +S  P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTS--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSP 240
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFKLK KLQ  TLG+GGVGLVSAY+SYSP
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFKLKKKLQIFTLGLGGVGLVSAYVSYSP 233

Query: 241 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEI 300
           EIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWNEI
Sbjct: 234 EIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWNEI 293

Query: 301 TVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 340
            VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 294 VVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770695|emb|CAN77926.1| hypothetical protein VITISV_018738 [Vitis vinifera]

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/340 (73%), Positives = 290/340 (85%), Gaps = 7/340 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M VL+Y  V   + PISQDSS+ +   P  R TK++LPKKK  KWSTGVAPG+YGGPPTT
Sbjct: 1   MVVLSYFSVNCATTPISQDSSTPTX--PNPRETKVILPKKKPQKWSTGVAPGDYGGPPTT 58

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           +KLRK+WGGE EDPLTSD+FIWN DFM RMK+LI+D D SS +  P +EE SGFLS++RV
Sbjct: 59  SKLRKYWGGE-EDPLTSDDFIWNKDFMGRMKKLIQDPDSSSLQPPPDKEESSGFLSISRV 117

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A S+T L+Q VEA      ++ G+  R+W+L PTRREQ+KWD+AT
Sbjct: 118 MSLDSLEVDLSKELSAPSRTVLEQQVEAP----PRRDGNTSRRWKLVPTRREQEKWDRAT 173

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSP 240
           KAATGGSDVMFRE+RKPRGDP+VLAA+S+EQYFKLK KLQ  TLG+GGVGLVSAY+SYSP
Sbjct: 174 KAATGGSDVMFREIRKPRGDPKVLAAESREQYFKLKKKLQIFTLGLGGVGLVSAYVSYSP 233

Query: 241 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEI 300
           EIAASF AG +GSLVYIRMLGS+VDSMA GAKGLMKGA+ QPRLLVPV LVMIYNRWNEI
Sbjct: 234 EIAASFGAGFIGSLVYIRMLGSSVDSMADGAKGLMKGAIAQPRLLVPVALVMIYNRWNEI 293

Query: 301 TVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 340
            VPE+GF+HLELIPMLVGFFTYK+ATF QA+EEA++IV K
Sbjct: 294 VVPEFGFMHLELIPMLVGFFTYKVATFVQAIEEALTIVGK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489593|gb|ABK96598.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/342 (71%), Positives = 293/342 (85%), Gaps = 5/342 (1%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           M +++Y+   +T+ P+SQDSSS+SSS P+ R TK++LPKKK +KWSTG+APGEYGGPPTT
Sbjct: 5   MTIVSYVSANSTTTPLSQDSSSSSSSTPSPRQTKVILPKKKPLKWSTGIAPGEYGGPPTT 64

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIE-DTDESSAEKFPVQEEPSGFLSLNR 119
           TKLRK+WGGE EDPLTSD+FIWN DFMPRMKRL+  D  +   +  P +EE SGFLSLNR
Sbjct: 65  TKLRKYWGGEGEDPLTSDDFIWNKDFMPRMKRLLHNDPVDPFLQTSPAKEESSGFLSLNR 124

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VM+LDS+EVDLSKEL    K  ++QPVEA    ++ +SGS P KWR+APTRREQDKWDKA
Sbjct: 125 VMTLDSVEVDLSKELAQRPKPVIEQPVEAT---TKVRSGSSP-KWRMAPTRREQDKWDKA 180

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYS 239
           TKA+T GSDVMFRELR+P+GDPEVLAAQS+EQYFKLK+ LQ LTLGIG VGLVS Y+SYS
Sbjct: 181 TKASTSGSDVMFRELRRPQGDPEVLAAQSREQYFKLKNNLQILTLGIGSVGLVSTYVSYS 240

Query: 240 PEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 299
           PEIAASF+AG +GSLVYIRMLG++VDS+A GAKG++KGA  QPRLLVPV+LVMIYNRWN 
Sbjct: 241 PEIAASFSAGFIGSLVYIRMLGNSVDSLADGAKGIVKGAAAQPRLLVPVLLVMIYNRWNG 300

Query: 300 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 341
           I VP+YGF+HLELIPMLVGFF+YKIATF QA++EA++ + +K
Sbjct: 301 ILVPDYGFMHLELIPMLVGFFSYKIATFVQAIDEALAPLVRK 342

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593011|gb|AAM64960.1| unknown [Arabidopsis thaliana]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/344 (68%), Positives = 285/344 (82%), Gaps = 9/344 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYIS 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFKLK+K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 238 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 297
           Y+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFNRW 294

Query: 298 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 341
           N I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 295 NAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402535|ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana] gi|3746067|gb|AAC63842.1| expressed protein [Arabidopsis thaliana] gi|15215861|gb|AAK91474.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|19699268|gb|AAL91000.1| At2g31040/T16B12.15 [Arabidopsis thaliana] gi|20197222|gb|AAM14978.1| expressed protein [Arabidopsis thaliana] gi|330253388|gb|AEC08482.1| ATP synthase protein I [Arabidopsis thaliana]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/344 (68%), Positives = 285/344 (82%), Gaps = 9/344 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +D ++SS +  P +E+ SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDDPNDSSLDPSPSKEKSSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL + SK+ ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYIS 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFKLK+K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 238 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 297
           Y+PEIA SF AGLLGSL Y+RMLG++VD+MA GA+G+ KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIFNRW 294

Query: 298 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 341
           N I VPEYGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K
Sbjct: 295 NAILVPEYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826533|ref|XP_002881149.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata] gi|297326988|gb|EFH57408.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/352 (67%), Positives = 286/352 (81%), Gaps = 13/352 (3%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTR-PTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           MA+L+YI  T+T+ PI QD S      P +R PTKI+LP KK  KWSTGVAPGEYGGPPT
Sbjct: 1   MAILSYISATSTTPPIPQDQS------PNSRLPTKIILPNKKPEKWSTGVAPGEYGGPPT 54

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGEKEDP+TS + IWN DFM +MK+L +  D+SS +  P +EE SGFLS +R
Sbjct: 55  TTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKLFDSPDDSSLDPSPSKEESSGFLSFSR 114

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS--QQKSGSVPRKWRLAPTRREQDKWD 177
           VMSLDS++VDLSKEL   SK  ++  ++ +  ++  Q     V  KW+LAPTRREQ+KWD
Sbjct: 115 VMSLDSMDVDLSKELAVSSKPVVKDLLDTSKLEAKKQMSKAIVSPKWKLAPTRREQEKWD 174

Query: 178 KATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYIS 237
           +ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQYFKLK+K+Q LTLGIGGVGLVSAYIS
Sbjct: 175 RATKAATGGSDVMFRELRRPRGDPEVQAAKDREQYFKLKNKIQVLTLGIGGVGLVSAYIS 234

Query: 238 YSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRW 297
           Y+PEIA SF AGL+GSL Y+RMLG++VD+MA GA+G++KGA  QPRLLVPVVLVMI+NRW
Sbjct: 235 YTPEIALSFGAGLMGSLAYMRMLGNSVDAMADGARGVVKGAANQPRLLVPVVLVMIFNRW 294

Query: 298 NEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK----DPDI 345
           N I VP+YGF+HLELIPMLVGFFTYKIATFFQA+EEA+SI  +K     PDI
Sbjct: 295 NAILVPDYGFMHLELIPMLVGFFTYKIATFFQAIEEAISITTQKPESSSPDI 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496336|gb|AFK36234.1| unknown [Lotus japonicus]

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/342 (66%), Positives = 279/342 (81%), Gaps = 4/342 (1%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MA+LNYI VT ++A  +   S   S +P  R +KILLP KK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAILNYICVT-SAATPTSPESPIPSPIPDPRQSKILLPNKKPEKWSTGMAPGDYGGPPTT 59

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV 120
           TKLRK+WGG+  DPL +D F+WN DFM R ++LI++T   + +  P +EE SGFLS NRV
Sbjct: 60  TKLRKYWGGDNRDPLDTDGFMWNKDFMSRYQKLIQETQPGATQSPPAKEEASGFLSFNRV 119

Query: 121 MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT 180
           MSLDSLEVDLSKEL+A +K  + Q +EAA + ++ +S  V  +W+L PTRREQ+KWD+AT
Sbjct: 120 MSLDSLEVDLSKELSAPAKNNIHQQIEAAPEMTESESKRV--RWKLVPTRREQEKWDRAT 177

Query: 181 KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSP 240
           KAATGG+DVMFRELR+PR +PEVLAAQ++EQY KLK+K+Q LTLGIGGVGLVS+Y+SYSP
Sbjct: 178 KAATGGNDVMFRELRRPRENPEVLAAQAEEQYDKLKNKMQILTLGIGGVGLVSSYVSYSP 237

Query: 241 EIAASFAAGLLGSLVYIRMLGSTVDSM-AAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNE 299
           EIAASF AGLLGSL YIRMLGS VD++   G KG +KGA+GQPRLLVPV+LVM+YNRWN 
Sbjct: 238 EIAASFGAGLLGSLAYIRMLGSNVDALRTNGGKGFVKGAIGQPRLLVPVILVMVYNRWNA 297

Query: 300 ITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKK 341
           I VPE+G +HLELIPMLVGFFTYKI TFFQA+EEA++I  KK
Sbjct: 298 ILVPEFGAMHLELIPMLVGFFTYKIGTFFQAIEEAITIAVKK 339

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465218|ref|XP_004150325.1| PREDICTED: uncharacterized protein LOC101216352 [Cucumis sativus]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/342 (67%), Positives = 281/342 (82%), Gaps = 9/342 (2%)

Query: 1   MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT 60
           MAVLNYI  +A S+PISQDSS  S  +P  R TK++LPKKK  KWSTG+APG+YGGPPTT
Sbjct: 1   MAVLNYI--SAASSPISQDSS-ISPPIPDPRQTKVILPKKKPEKWSTGIAPGDYGGPPTT 57

Query: 61  TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLI--EDTDESSAEKFPVQEEPSGFLSLN 118
           TKLRK+WGGEK+DPLTSD++IWN +FM RMK+ +  +  D S     P  ++PSGFLSLN
Sbjct: 58  TKLRKYWGGEKDDPLTSDDYIWNREFMARMKKFVKYQPDDLSLTVNKPKDDKPSGFLSLN 117

Query: 119 RVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDK 178
           RVM+LDSL+VDLSKEL+A      +  VE  I    +KS   PR W+LAPTRREQ+KWD+
Sbjct: 118 RVMTLDSLDVDLSKELSAPPMPRSEDLVEKNIPIDHRKS---PR-WKLAPTRREQEKWDR 173

Query: 179 ATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISY 238
           A +AATGGSDVMFRELR+P+G+PEVLAA S EQY KLK K+Q LTL IGGVGL+SAY+SY
Sbjct: 174 AYEAATGGSDVMFRELRRPQGNPEVLAALSMEQYVKLKKKMQILTLAIGGVGLISAYVSY 233

Query: 239 SPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 298
           SPE++ASF AGL+GSLVYIRMLG++VDS+A GAKGL+KGAV QPRLLVPV+LVMIYNRWN
Sbjct: 234 SPEVSASFGAGLIGSLVYIRMLGNSVDSLADGAKGLVKGAVAQPRLLVPVILVMIYNRWN 293

Query: 299 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEK 340
            I V +YG + L+LIPMLVGFFTYK+ATF QA+EEA+++V++
Sbjct: 294 GILVEDYGVVQLQLIPMLVGFFTYKVATFVQAIEEALTVVKE 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474593|ref|XP_003607581.1| ATP synthase protein I [Medicago truncatula] gi|355508636|gb|AES89778.1| ATP synthase protein I [Medicago truncatula]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/347 (65%), Positives = 272/347 (78%), Gaps = 12/347 (3%)

Query: 1   MAVLNYI-PVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPT 59
           M ++NY   VT  + PISQDSSS S   P  R TK++LP KK MKWSTG+APG+YGGPPT
Sbjct: 1   MGIINYYNCVTCAATPISQDSSS-SPLQPNPRQTKVILPNKKPMKWSTGMAPGDYGGPPT 59

Query: 60  TTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNR 119
           TTKLRK+WGGE  DPL SD+++WN DF+P  +R+I   ++ S    P +E PSGFLSLNR
Sbjct: 60  TTKLRKYWGGEDPDPLASDDYLWNKDFVPHFERMIHPPEQPS----PSKEVPSGFLSLNR 115

Query: 120 VMSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKA 179
           VMSLDS+EVDLSKEL+A     +QQ +E  I  ++  S  V  +WRLAPTRREQDKW++A
Sbjct: 116 VMSLDSMEVDLSKELSA---PVVQQQIETPIIATESDSKRV--RWRLAPTRREQDKWNRA 170

Query: 180 TKAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYS 239
            KAAT GSDVM RE RK R +PEVLAAQ +EQY KLK +LQ LTLGIGGVGLVS Y+SYS
Sbjct: 171 AKAATDGSDVMLRESRKSRENPEVLAAQYREQYIKLKKRLQALTLGIGGVGLVSTYVSYS 230

Query: 240 PEIAASFAAGLLGSLVYIRMLGSTVDSMA-AGAKGLMKGAVGQPRLLVPVVLVMIYNRWN 298
           PEIAASF AG LGSL YIRMLGS++DS+   GA+  +KGA+GQPRLLVPVVLVMIYNRWN
Sbjct: 231 PEIAASFGAGFLGSLAYIRMLGSSMDSLNPNGARAAIKGAIGQPRLLVPVVLVMIYNRWN 290

Query: 299 EITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDI 345
            I VPEYG +HLELIPMLVGFFTYK+ATF QA+EE +++  KKD +I
Sbjct: 291 AILVPEYGIMHLELIPMLVGFFTYKMATFAQAIEEVITVASKKDLNI 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2052836	350	AT2G31040 [Arabidopsis thalian	0.901	0.891	0.646	1.9e-108

TAIR|locus:2052836 AT2G31040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 203/314 (64%), Positives = 245/314 (78%)

Query:    34 KILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRL 93
             KI+LP KK  KWSTGVAPGEYGGPPTTTKLRK+WGGEKEDP+TS + IWN DFM +MK+L
Sbjct:    29 KIILPNKKPEKWSTGVAPGEYGGPPTTTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKL 88

Query:    94 IEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS 153
              +D ++SS +  P +E+ SGFLS +RVMSLDS++VDLSKEL + SK+ ++  ++ +  ++
Sbjct:    89 FDDPNDSSLDPSPSKEKSSGFLSFSRVMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEA 148

Query:   154 --QQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQ 211
               Q     V  KW+LAPTRREQ+KWD+ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQ
Sbjct:   149 KKQMSKAIVSPKWKLAPTRREQEKWDRATKAATGGSDVMFRELRRPRGDPEVQAAKDREQ 208

Query:   212 YFKLKSKLQFLTLGIGGVGLVSAYISYSPEIXXXXXXXXXXXXVYIRMLGSTVDSXXXXX 271
             YFKLK+K+Q LTLGIGGVGLVSAYISY+PEI             Y+RMLG++VD+     
Sbjct:   209 YFKLKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGA 268

Query:   272 XXXXXXXXXQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAV 331
                      QPRLLVPVVLVMI+NRWN I VPEYGF+HLELIPMLVGFFTYKIATFFQA+
Sbjct:   269 RGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQAI 328

Query:   332 EEAVSIVEKKDPDI 345
             EEA+SI  +K   I
Sbjct:   329 EEAISITTQKPESI 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      346       298   0.00094  115 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.88u 0.11s 25.99t   Elapsed:  00:00:01
  Total cpu time:  25.88u 0.11s 25.99t   Elapsed:  00:00:01
  Start:  Fri May 10 19:33:35 2013   End:  Fri May 10 19:33:36 2013

GO:0005886 "plasma membrane" evidence=ISM

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00018736001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (338 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00007662001	SubName- Full=Chromosome undetermined scaffold_197, whole genome shotgun sequence; (479 aa)				•			•		0.486
	GSVIVG00014308001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (279 aa)				•			•		0.454
	GSVIVG00001491001	SubName- Full=Putative uncharacterized protein (Chromosome chr3 scaffold_117, whole genome shot [...] (119 aa)				•			•		0.437
	GSVIVG00019374001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (522 aa)							•		0.412
	GSVIVG00036435001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (557 aa)				•			•		0.411
	GSVIVG00024719001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (396 aa)				•					0.408

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
pfam03899	99	pfam03899, ATP_synt_I, ATP synthase I chain	8e-07

>gnl|CDD|217784 pfam03899, ATP_synt_I, ATP synthase I chain

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 16/109 (14%)

Query: 218 KLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTV----DSMAAGAKG 273
           +L  + L +  V  +   ++    +A S   G L SL+   +          ++A  AK 
Sbjct: 1   RLLLIQLILLAVLALGWGLTGGLTVALSALLGGLISLLNFALFARRAFRFGGAIARKAKK 60

Query: 274 LMKG-AVGQP-RLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFF 320
            ++   +G+  RL + + L ++           + +  L L+ + +G  
Sbjct: 61  AVRSFYLGEAIRLALTIALFVLA----------FKYPKLSLLALFLGLL 99

Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
PF03899	100	ATP_synt_I: ATP synthase I chain; InterPro: IPR005	98.12
PF12966	85	AtpR: N-ATPase, AtpR subunit	94.18
PRK05760	124	F0F1 ATP synthase subunit I; Validated	92.28
PRK06099	126	F0F1 ATP synthase subunit I; Validated	89.35
PRK08049	124	F0F1 ATP synthase subunit I; Validated	87.45
COG3312	128	AtpI F0F1-type ATP synthase, subunit I [Energy pro	80.1

>PF03899 ATP_synt_I: ATP synthase I chain; InterPro: IPR005598 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=98.12  E-value=1.3e-05  Score=63.25  Aligned_cols=93  Identities=20%  Similarity=0.258  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHhHhhhccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cccccC--CCCCCchHHHHHHHH
Q 019070          219 LQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLVYIRMLGSTVDSMAAGA----KGLMKG--AVGQPRLLVPVVLVM  292 (346)
Q Consensus       219 LLl~Tl~igavg~~~~~l~ys~~~AlSyllGa~gGllYLrLL~rsVD~Lg~g~----~g~~kg--algqpRLLVPV~Lvv  292 (346)
                      +...++.+++++.+.+++.++.+.++|+++|++.+++...++.+.++++.+..    ++..+.  ..---|+++-+++++
T Consensus         2 i~~~~~~l~~~~~~~~~~~~~~~~~~s~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~R~~l~~~~~~   81 (100)
T PF03899_consen    2 IVIIQLILLAVLALVFFLFFGWPVALSFLLGGLISLLNFFLLARRVFRLAGALAMDPGRAVRAMYLGYFIRLALTILLFI   81 (100)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889999999999999999999999999999999999999996664211    111110  012257888888888


Q ss_pred             HHHHhhccccCCccccchhHHHHHHHHH
Q 019070          293 IYNRWNEITVPEYGFLHLELIPMLVGFF  320 (346)
Q Consensus       293 ~a~rwn~i~~p~~g~~~LeLlP~llGFL  320 (346)
                      +..++..         +++.++.++||+
T Consensus        82 ~~~~~~~---------~~~~~~~~~Gl~  100 (100)
T PF03899_consen   82 LAFKFPP---------ELNPIALLIGLL  100 (100)
T ss_pred             HHHHHHc---------ccHHHHHHHHHC
Confidence            8888832         488999999985

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The atp operon of most prokaryotes contains the structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein of unknown function. A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex []. A role in magnesium uptake has also been suggested []. More information about this protein can be found at Protein of the Month: ATP synthases [].

>PF12966 AtpR: N-ATPase, AtpR subunit

Probab=94.18  E-value=0.15  Score=41.63  Aligned_cols=78  Identities=21%  Similarity=0.221  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCCC--CchHHHHHHHHHHHHhhccccCCccccchhHHHHHHH
Q 019070          241 EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQ--PRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVG  318 (346)
Q Consensus       241 ~~AlSyllGa~gGllYLrLL~rsVD~Lg~g~~g~~kgalgq--pRLLVPV~Lvv~a~rwn~i~~p~~g~~~LeLlP~llG  318 (346)
                      +.+..+++|.+.|.+|..-|-.+|.++..+.+.. .--.++  .|+.+.++...+.++.+          ...++..++|
T Consensus         2 ~~~~~~~~G~~lG~~yF~gLw~tvr~~~~~~~p~-~~~~~S~l~R~~l~~~~f~~~~~~~----------~~~lL~~l~G   70 (85)
T PF12966_consen    2 QLLLAFLAGLLLGALYFGGLWWTVRRLLASKRPA-LWFLLSFLLRLALVLAGFYLLAQGG----------WWRLLACLLG   70 (85)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcH-HHHHHHHHHHHHHHHHHHHHHHhCC----------HHHHHHHHHH
Confidence            3578899999999999999999999996432110 001122  45666555554444332          2668999999


Q ss_pred             HHHHHHHHHHH
Q 019070          319 FFTYKIATFFQ  329 (346)
Q Consensus       319 FLTYK~AlLvq  329 (346)
                      |++.+..++..
T Consensus        71 F~~aR~i~~r~   81 (85)
T PF12966_consen   71 FLLARFIVLRR   81 (85)
T ss_pred             HHHHHHHHHHH
Confidence            99998877654

>PRK05760 F0F1 ATP synthase subunit I; Validated

Probab=92.28  E-value=1.1  Score=38.77  Aligned_cols=103  Identities=14%  Similarity=0.118  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHhHhhhccCHHHHHHHHHHHHHHHH----HHHHHHHhhhhhccc--ccccccCCCCCCchHHHHHHHH
Q 019070          219 LQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV----YIRMLGSTVDSMAAG--AKGLMKGAVGQPRLLVPVVLVM  292 (346)
Q Consensus       219 LLl~Tl~igavg~~~~~l~ys~~~AlSyllGa~gGll----YLrLL~rsVD~Lg~g--~~g~~kgalgqpRLLVPV~Lvv  292 (346)
                      ++..=++++.++++.+++..+.+.|.|+++|++.+++    |.+.+-|+...=..+  ...-..|-..  .+++-+++.+
T Consensus        10 ~l~~Q~~~~l~~a~~~~~~~~~~~a~Sal~Ggl~~~lP~~~Fa~~~fr~~g~~~~~~i~~~fy~GE~~--K~~lTi~lf~   87 (124)
T PRK05760         10 LLLIQLVVVLVAALVLWVAVGPVWGYSALIGGLIAVLANAYFAHCAFRFSGARAAKAIVRSFYAGEAG--KIIITAVLFA   87 (124)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence            4444555666666666777899999999999998765    444444443111000  0000011111  2444445544


Q ss_pred             HHHHhhccccCCccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 019070          293 IYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAV  335 (346)
Q Consensus       293 ~a~rwn~i~~p~~g~~~LeLlP~llGFLTYK~AlLvqa~rdv~  335 (346)
                      ++-+|-.         +++..+.|.||+   .++.++-+-+.+
T Consensus        88 l~f~~~~---------~l~~~~lf~gf~---l~l~~~w~aP~~  118 (124)
T PRK05760         88 LAFAGVQ---------PLLPPLKFGTYL---LVLGVNWFAPLL  118 (124)
T ss_pred             HHHHHhc---------hhhHHHHHHHHH---HHHHHHHHHHHH
Confidence            4444421         355555555655   577776665544

>PRK06099 F0F1 ATP synthase subunit I; Validated

Probab=89.35  E-value=1.8  Score=38.02  Aligned_cols=87  Identities=18%  Similarity=0.332  Sum_probs=46.4

Q ss_pred             hhccCHHHHHHHHHHHHHHHH---HHHHHH-HhhhhhcccccccccCCCCCCchHHHHHHHHHHHHhhccccCCccccch
Q 019070          235 YISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEITVPEYGFLHL  310 (346)
Q Consensus       235 ~l~ys~~~AlSyllGa~gGll---YLrLL~-rsVD~Lg~g~~g~~kgalgqpRLLVPV~Lvv~a~rwn~i~~p~~g~~~L  310 (346)
                      +...|.+.|+|+++|++.+++   |.-++. ++-.+-..-.+.-..|-.+  .+++-+++++++=.|=.         ++
T Consensus        30 ~~~~~~~~a~Sal~Ggli~~LPn~~Fa~~aF~~~~~~~~~~~sFy~GE~~--K~ilTivlf~laf~~~~---------~~   98 (126)
T PRK06099         30 LLIWQGQSAVSFLLGFLSAFLPFCLFVYWIFFRKQKNSSKLTAFYRGEAI--KFILTIVLIVIAFKLLP---------VL   98 (126)
T ss_pred             HHHhhHHHHHHHHHhhHHHHHhHHHHHHHHHHhccchHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhh---------hh
Confidence            445799999999999999874   444443 2211110000000011112  24444444444433321         38


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh
Q 019070          311 ELIPMLVGFFTYKIATFFQAVEEAV  335 (346)
Q Consensus       311 eLlP~llGFLTYK~AlLvqa~rdv~  335 (346)
                      +.+|.++||+.   +++++-+-+..
T Consensus        99 ~~~~lf~~y~l---~l~~~~~aP~~  120 (126)
T PRK06099         99 HFIAFFVGFFI---ALVLNNLIPFI  120 (126)
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHH
Confidence            89999888874   66666655543

>PRK08049 F0F1 ATP synthase subunit I; Validated

Probab=87.45  E-value=9.7  Score=33.40  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhccCHHHHHHHHHHHHHHHH---HHHHHH-Hhhhhhccccccc-----ccCCCCCCchH
Q 019070          215 LKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV---YIRMLG-STVDSMAAGAKGL-----MKGAVGQPRLL  285 (346)
Q Consensus       215 LK~~LLl~Tl~igavg~~~~~l~ys~~~AlSyllGa~gGll---YLrLL~-rsVD~Lg~g~~g~-----~kgalgqpRLL  285 (346)
                      |-+++++.=+++..+.++ +|...+.+.|.|.++|++..++   |.-+.. |+-..  ...++.     ..|-..  .++
T Consensus        10 la~klll~Q~~~~~~~s~-~~~~~~~~~~~Sal~Ggl~~~lPn~~Fa~~afr~~~~--~~a~~~v~~sFy~GE~l--K~~   84 (124)
T PRK08049         10 VARKLLLLQLLTFVASGA-LFSLKDPFWGVSALAGGLAAWLPNVLFMIFAWRHQAH--TPAKGRVAWSFAFGEAL--KVL   84 (124)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHcCHHHHHHHHHhhHHHHHhHHHHHHHHHHhccc--cchHHHHHHHHHHHHHH--HHH
Confidence            334445544444444443 4666799999999999998875   222111 22100  000000     011111  255


Q ss_pred             HHHHHHHHHHHhhccccCCccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 019070          286 VPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEA  334 (346)
Q Consensus       286 VPV~Lvv~a~rwn~i~~p~~g~~~LeLlP~llGFLTYK~AlLvqa~rdv  334 (346)
                      +-++|++++-+|=          +.+.+|.++||+.   ++.++-+-+.
T Consensus        85 lTi~lf~~af~~~----------~~~~~plf~ty~l---~L~~~~~aP~  120 (124)
T PRK08049         85 ATIALLVVALGVF----------KAVFLPLGLTWLS---VLVVQILAPA  120 (124)
T ss_pred             HHHHHHHHHHHHH----------hHHHHHHHHHHHH---HHHHHHHHHH
Confidence            5555555555553          2457788888874   6666665544

>COG3312 AtpI F0F1-type ATP synthase, subunit I [Energy production and conversion]

Probab=80.10  E-value=21  Score=31.92  Aligned_cols=41  Identities=22%  Similarity=0.309  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhhccCHHHHHHHHHHHHHHHH
Q 019070          214 KLKSKLQFLTLGIGGVGLVSAYISYSPEIAASFAAGLLGSLV  255 (346)
Q Consensus       214 ~LK~~LLl~Tl~igavg~~~~~l~ys~~~AlSyllGa~gGll  255 (346)
                      +.+++|++.-+++..+..+ ++..++++.++|++.|+.+-++
T Consensus        10 k~ar~lLliql~~~ivaa~-~f~v~~~~~~vSal~Ggla~~L   50 (128)
T COG3312          10 KVARKLLLIQLLVVIVAAL-LFAVWQPQWGVSALLGGLAAFL   50 (128)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhccHHHHH
Confidence            4566777777666554444 5555679999999999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00