Citrus Sinensis ID: 019112

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
MVLKFEKSFIIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
ccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccEEEEEEEcccccccccccEEEEEccccccccccccEEEEcccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccEEccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcccccccccccHHHHHHHHHHHccEEEccccccccccccccHHHHHcccEcccEEEEcccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEEEEccEccEEEEEEEccEcccccEccEEEEEcccccccHHHcccccEEc
MVLKFEKSFIIPMFVIIILVITCASqvvsgrsmhepsivEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEgnrtyklgtnefsdltNEEFRAsytgynrpvpsvsrqssrpstfkyqnvtdvptsidwrEKGAvthiknqghcgscWAFSAVAAVEGITQITGGKLIELSEQqlvdcstdnngcsgglMDKAFEYIIENkglateadypyqqeqgtcDKQKEKAAAATIgkyedlpkgdeHALLQAVTKQPVSVCVEASGQAFRFYKrgvlnaecgdncdhgVAVVgfgtaeeedgAKYWLIKNswgetwgesgyIRILrdeglcgiateasypvam
MVLKFEKSFIIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKAnkegnrtyklgtnefsdLTNEEFRASytgynrpvpsvsrqssrpstfkyqnvtdvptsIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIAteasypvam
MVLKFEKSfiipmfviiilviTCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNrpvpsvsrqssrpsTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
***KFEKSFIIPMFVIIILVITCASQVVSGR******IVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKAN*****TYKLG************************************KYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPY*****************************EHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATE*******
*********IIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGY********************NVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
MVLKFEKSFIIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNR************STFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQE************AATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
***KFEKSFIIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNR**********RPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVLKFEKSFIIPMFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query346 2.2.26 [Sep-21-2011]
O65493355 Xylem cysteine proteinase no no 0.869 0.847 0.528 2e-93
Q9FGR9361 KDEL-tailed cysteine endo no no 0.953 0.914 0.485 7e-90
O65039360 Vignain OS=Ricinus commun N/A no 0.864 0.830 0.524 1e-88
Q9LM66356 Xylem cysteine proteinase no no 0.869 0.845 0.501 5e-88
Q9STL4361 KDEL-tailed cysteine endo no no 0.973 0.933 0.448 5e-86
P25250373 Cysteine proteinase EP-B N/A no 0.878 0.815 0.510 9e-86
P43297 462 Cysteine proteinase RD21a no no 0.939 0.703 0.445 2e-85
P43156360 Thiol protease SEN102 OS= N/A no 0.942 0.905 0.455 3e-85
P25249371 Cysteine proteinase EP-B N/A no 0.878 0.819 0.504 5e-85
P12412362 Vignain OS=Vigna mungo PE N/A no 0.881 0.842 0.488 7e-85
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  342 bits (877), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/312 (52%), Positives = 220/312 (70%), Gaps = 11/312 (3%)

Query: 38  IVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNE 97
           ++E  E WM++H + YK   EK  R  +F++NL +I++ N E N +Y LG NEF+DLT+E
Sbjct: 47  LLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEIN-SYWLGLNEFADLTHE 105

Query: 98  EFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWA 157
           EF+  Y G  +P  S  RQ S  + F+Y+++TD+P S+DWR+KGAV  +K+QG CGSCWA
Sbjct: 106 EFKGRYLGLAKPQFSRKRQPS--ANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWA 163

Query: 158 FSAVAAVEGITQITGGKLIELSEQQLVDCSTD-NNGCSGGLMDKAFEYIIENKGLATEAD 216
           FS VAAVEGI QIT G L  LSEQ+L+DC T  N+GC+GGLMD AF+YII   GL  E D
Sbjct: 164 FSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDD 223

Query: 217 YPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYK 276
           YPY  E+G C +QKE     TI  YED+P+ D+ +L++A+  QPVSV +EASG+ F+FYK
Sbjct: 224 YPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYK 283

Query: 277 RGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD----EG 332
            GV N +CG + DHGVA VG+G+++   G+ Y ++KNSWG  WGE G+IR+ R+    EG
Sbjct: 284 GGVFNGKCGTDLDHGVAAVGYGSSK---GSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEG 340

Query: 333 LCGIATEASYPV 344
           LCGI   ASYP 
Sbjct: 341 LCGINKMASYPT 352
Probable thiol protease.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
255564910341 cysteine protease, putative [Ricinus com 0.942 0.956 0.581 1e-108
255564908342 cysteine protease, putative [Ricinus com 0.945 0.956 0.578 1e-108
255563110344 cysteine protease, putative [Ricinus com 0.950 0.956 0.563 1e-106
225446581341 PREDICTED: vignain [Vitis vinifera] 0.936 0.950 0.545 1e-104
147839728341 hypothetical protein VITISV_032465 [Viti 0.936 0.950 0.543 1e-103
144905116341 cysteine proteinase [Lotus japonicus] 0.936 0.950 0.545 1e-103
224114698305 predicted protein [Populus trichocarpa] 0.864 0.980 0.594 1e-103
225446583341 PREDICTED: KDEL-tailed cysteine endopept 0.936 0.950 0.540 1e-103
224135841342 predicted protein [Populus trichocarpa] 0.945 0.956 0.532 1e-103
50355621361 cysteine protease [Daucus carota] 0.945 0.905 0.539 1e-103
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/339 (58%), Positives = 242/339 (71%), Gaps = 13/339 (3%)

Query: 13  MFVIIILVITCASQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEY 72
           MFV +++V    SQ  S RS+H+ ++ E+HE WM ++GR YKD  EK  R  IF+ N+E+
Sbjct: 10  MFVALLVVGLWVSQAWS-RSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 73  IEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVP 132
           IE  NK GNR YKL  NEF+DLTNEEF+AS  GY R   S +   S  S+F+Y NVT VP
Sbjct: 69  IESFNKPGNRPYKLDINEFADLTNEEFKASRNGYKR---SSNVGLSEKSSFRYGNVTAVP 125

Query: 133 TSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCST--DN 190
           TS+DWR+KGAVT IK+QG CG CWAFSAVAA+EGIT+++ GKLI LSEQ+LVDC T  ++
Sbjct: 126 TSMDWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGED 185

Query: 191 NGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEH 250
            GC GGLMD AFE+I +N GL TEA+YPYQ   GTC+  K    AA I  YED+P   E 
Sbjct: 186 QGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPANSED 245

Query: 251 ALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWL 310
           ALL+AV  QPVSV ++ASG AF+FY  GV   +CG   DHGV  VG+GT+   DG KYWL
Sbjct: 246 ALLKAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTS---DGTKYWL 302

Query: 311 IKNSWGETWGESGYIRILRD----EGLCGIATEASYPVA 345
           +KNSWG +WGE GYIR+ RD    EGLCGIA ++SYP A
Sbjct: 303 VKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQSSYPTA 341

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera] Back     alignment and taxonomy information
>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera] Back     alignment and taxonomy information
>gi|144905116|dbj|BAF56430.1| cysteine proteinase [Lotus japonicus] Back     alignment and taxonomy information
>gi|224114698|ref|XP_002316833.1| predicted protein [Populus trichocarpa] gi|222859898|gb|EEE97445.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224135841|ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|222835687|gb|EEE74122.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.921 0.916 0.537 2.4e-92
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.916 0.929 0.530 3.9e-92
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.919 0.919 0.519 3.2e-88
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.916 0.892 0.521 2.9e-87
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.884 0.886 0.523 4.3e-86
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.867 0.845 0.514 1e-84
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.884 0.847 0.518 1.5e-83
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.916 0.916 0.493 1.7e-82
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.878 0.853 0.492 1.7e-82
TAIR|locus:2825832 462 RD21A "responsive to dehydrati 0.878 0.658 0.475 9.7e-80
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
 Identities = 179/333 (53%), Positives = 226/333 (67%)

Query:    25 SQVVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTY 84
             S   S  S+ E S +EKHEQWMA+  R Y DE EK  R  IFK+NLE+++  N     TY
Sbjct:    18 SLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITY 77

Query:    85 KLGTNEFSDLTNEEFRASYTGY----NXXXXXXXXXXXXXXTFKYQNVTDVPTSIDWREK 140
             K+  NEFSDLT+EEFRA++TG                     F+Y NV+D   S+DWR++
Sbjct:    78 KVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSSGKNTVPFRYGNVSDNGESMDWRQE 137

Query:   141 GAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD-NNGCSGGLMD 199
             GAVT +K QG CG CWAFSAVAAVEGIT+IT G+L+ LSEQQL+DC  D N GC GG+M 
Sbjct:   138 GAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSLSEQQLLDCDRDYNQGCRGGIMS 197

Query:   200 KAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAA---AATIGKYEDLPKGDEHALLQAV 256
             KAFEYII+N+G+ TE +YPYQ+ Q TC      ++   AATI  YE +P  +E ALLQAV
Sbjct:   198 KAFEYIIKNQGITTEDNYPYQESQQTCSSSTTLSSSFRAATISGYETVPMNNEEALLQAV 257

Query:   257 TKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWG 316
             ++QPVSV +E +G AFR Y  GV N ECG +  H V +VG+G +EE  G KYW++KNSWG
Sbjct:   258 SQQPVSVGIEGTGAAFRHYSGGVFNGECGTDLHHAVTIVGYGMSEE--GTKYWVVKNSWG 315

Query:   317 ETWGESGYIRILRD----EGLCGIATEASYPVA 345
             ETWGE+GY+RI RD    +G+CG+A  A YP+A
Sbjct:   316 ETWGENGYMRIKRDVDAPQGMCGLAILAFYPLA 348
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.52420.86410.8305N/Ano
P54640CYSP5_DICDI3, ., 4, ., 2, 2, ., -0.39770.93350.9389yesno
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.46390.87860.8194yesno
P25249CYSP1_HORVU3, ., 4, ., 2, 2, ., -0.50460.87860.8194N/Ano
O70370CATS_MOUSE3, ., 4, ., 2, 2, ., 2, 70.45450.86700.8823yesno
P25774CATS_HUMAN3, ., 4, ., 2, 2, ., 2, 70.42810.92190.9637yesno
P25326CATS_BOVIN3, ., 4, ., 2, 2, ., 2, 70.42350.92480.9667yesno
P25250CYSP2_HORVU3, ., 4, ., 2, 2, ., -0.51090.87860.8150N/Ano
Q8HY81CATS_CANFA3, ., 4, ., 2, 2, ., 2, 70.43230.92480.9667yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018721001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (341 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-118
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-106
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 2e-83
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 6e-74
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 8e-74
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 9e-63
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 1e-35
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 3e-34
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 7e-32
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 4e-27
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 7e-24
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 7e-22
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 4e-18
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 5e-16
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 5e-14
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 2e-10
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  339 bits (873), Expect = e-118
 Identities = 121/216 (56%), Positives = 145/216 (67%), Gaps = 5/216 (2%)

Query: 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDN 190
           +P S DWREKGAVT +K+QG CGSCWAFSAV A+EG   I  GKL+ LSEQQLVDC T N
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 191 NGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEH 250
           NGC+GGL D AFEYI +N G+ TE+DYPY    GTC  +K  +  A I  Y D+P  DE 
Sbjct: 61  NGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDEE 120

Query: 251 ALLQAV-TKQPVSVCVEASGQAFRFYKRGVLN-AECGDNCDHGVAVVGFGTAEEEDGAKY 308
           AL  A+    PVSV ++A    F+ YK GV    EC    DH V +VG+GT   E+G  Y
Sbjct: 121 ALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGT---ENGVPY 177

Query: 309 WLIKNSWGETWGESGYIRILRDEGLCGIATEASYPV 344
           W++KNSWG  WGE+GY RI R    CGIA+EASYP+
Sbjct: 178 WIVKNSWGTDWGENGYFRIARGVNECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 346
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.72
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.7
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.57
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 98.96
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.98
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.85
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.77
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 96.68
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 88.11
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3.7e-84  Score=583.86  Aligned_cols=302  Identities=39%  Similarity=0.752  Sum_probs=267.3

Q ss_pred             CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCCCCCCCC
Q 019112           33 MHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPS  112 (346)
Q Consensus        33 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~  112 (346)
                      .......+.|..|+.+|+|+|.+.+|..+|+.||++|+..+++++.....|...|+|+|||||+|||++++++.+.....
T Consensus        62 ~~~l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~  141 (372)
T KOG1542|consen   62 PRGLGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSK  141 (372)
T ss_pred             CcccchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhcccccccc
Confidence            34455689999999999999999999999999999999999999886545889999999999999999999877653110


Q ss_pred             CCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCC
Q 019112          113 VSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNG  192 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~g  192 (346)
                      ....   ....+....+.||++||||++|.||||||||+||||||||+++++|+++.++++++++||||+|+||+..++|
T Consensus       142 ~~~~---~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~g  218 (372)
T KOG1542|consen  142 LPGD---AAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNG  218 (372)
T ss_pred             Cccc---cccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCc
Confidence            0011   1111123446899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchHHHHHHHHHcCCCCCCCCcCCCCCCC-cccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccc
Q 019112          193 CSGGLMDKAFEYIIENKGLATEADYPYQQEQG-TCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQ  270 (346)
Q Consensus       193 c~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~  270 (346)
                      |+||.+..|++|+++..|+..|++|||++..+ .|... .....+.|.+|..++ .|+++|.+.|. +|||+|+|++.  
T Consensus       219 C~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~-~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~--  294 (372)
T KOG1542|consen  219 CNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFD-KSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAK--  294 (372)
T ss_pred             CCCCChhHHHHHHHHhCCccccccCCccccCCCccccc-hhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchH--
Confidence            99999999999988888999999999999887 99988 467889999999998 58999998886 89999999975  


Q ss_pred             cccccCCceEeC---CCCCC-CCeeEEEEEeeccccCC-CccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeee
Q 019112          271 AFRFYKRGVLNA---ECGDN-CDHGVAVVGFGTAEEED-GAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPV  344 (346)
Q Consensus       271 ~f~~y~~Gi~~~---~~~~~-~~Hav~iVGyg~~~~~~-g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~  344 (346)
                      .+++|.+||..+   .|+.. ++|||+|||||..   . +++|||||||||++|||+||+|+.||.|.|||+++++-+.
T Consensus       295 ~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~---g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~  370 (372)
T KOG1542|consen  295 PMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSS---GYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAA  370 (372)
T ss_pred             HHHHhcccccCCCcccCCccccCceEEEEeecCC---CCCCceEEEECCccccccccceEEEeccccccccccchhhhh
Confidence            799999999998   38865 8999999999998   5 7899999999999999999999999999999999987654

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 2e-74
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 2e-72
1pci_A322 Procaricain Length = 322 3e-66
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 3e-64
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 4e-64
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 8e-64
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 1e-63
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-63
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 9e-62
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-60
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 1e-60
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 2e-60
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 3e-60
2act_A220 Crystallographic Refinement Of The Structure Of Act 4e-60
3hwn_A258 Cathepsin L With Az13010160 Length = 258 2e-58
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-58
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 1e-56
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 6e-56
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 1e-55
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 2e-55
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 2e-55
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-55
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 2e-55
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 2e-55
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 2e-55
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 3e-55
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 7e-55
3of8_A221 Structural Basis For Reversible And Irreversible In 9e-55
3h89_A220 A Combined Crystallographic And Molecular Dynamics 1e-54
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 2e-54
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-54
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 2e-54
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 3e-54
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-54
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 3e-54
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 8e-54
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 1e-53
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 1e-53
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-53
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 4e-53
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 4e-53
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-52
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 3e-52
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-52
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 4e-52
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 4e-52
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 5e-52
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-51
1ppo_A216 Determination Of The Structure Of Papaya Protease O 4e-51
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 6e-51
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 1e-50
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 1e-50
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 1e-50
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 2e-49
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 3e-49
2vhs_A217 Cathsilicatein, A Chimera Length = 217 4e-49
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-48
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 1e-47
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-47
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-47
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 3e-47
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 4e-47
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 8e-47
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 9e-47
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 2e-46
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 2e-43
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 4e-43
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-41
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 9e-41
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 1e-40
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 1e-40
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-40
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-40
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 5e-40
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 7e-39
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 5e-38
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 5e-32
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 2e-27
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 5e-24
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 5e-24
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 6e-24
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 6e-24
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 9e-23
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-20
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 5e-19
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-17
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-17
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-16
1mir_A322 Rat Procathepsin B Length = 322 2e-16
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 2e-16
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 5e-16
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 6e-16
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 6e-16
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-15
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 3e-15
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 3e-15
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 3e-15
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 5e-15
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 3e-11
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 3e-11
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 5e-11
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 1e-10
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 1e-10
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 9e-09
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 3e-08
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 9e-08
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-07
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/219 (59%), Positives = 159/219 (72%), Gaps = 7/219 (3%)
Query: 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDN 190
           VP S+DWR+KGAVT +K+QG CGSCWAFS + AVEGI QI   KL+ LSEQ+LVDC TD 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 191 N-GCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDE 249
           N GC+GGLMD AFE+I +  G+ TEA+YPY+   GTCD  KE A A +I  +E++P+ DE
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDE 121
Query: 250 HALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYW 309
           +ALL+AV  QPVSV ++A G  F+FY  GV    CG   DHGVA+VG+GT    DG KYW
Sbjct: 122 NALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTT--IDGTKYW 179
Query: 310 LIKNSWGETWGESGYIRILR----DEGLCGIATEASYPV 344
            +KNSWG  WGE GYIR+ R     EGLCGIA EASYP+
Sbjct: 180 TVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 218
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-180
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-174
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-173
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-171
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-167
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-163
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-163
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-161
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-140
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-137
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-137
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-137
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-137
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-136
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-136
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-136
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-136
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-135
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-134
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-132
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-130
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-130
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-129
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-129
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-129
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-129
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-128
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-125
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-125
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-124
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-120
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-109
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-104
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-101
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-97
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 6e-89
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-85
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-77
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 1e-75
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 1e-34
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 4e-24
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-10
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  501 bits (1293), Expect = e-180
 Identities = 134/315 (42%), Positives = 184/315 (58%), Gaps = 12/315 (3%)

Query: 34  HEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSD 93
               +++    WM  H + Y++  EK  R  IFK NL YI++ NK+ N +Y LG NEF+D
Sbjct: 14  STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFAD 72

Query: 94  LTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCG 153
           L+N+EF   Y G        + + S    F  +++ ++P ++DWR+KGAVT +++QG CG
Sbjct: 73  LSNDEFNEKYVGSLIDA---TIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCG 129

Query: 154 SCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLAT 213
           SCWAFSAVA VEGI +I  GKL+ELSEQ+LVDC   ++GC GG    A EY+ +N G+  
Sbjct: 130 SCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHL 188

Query: 214 EADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFR 273
            + YPY+ +QGTC  ++             +   +E  LL A+ KQPVSV VE+ G+ F+
Sbjct: 189 RSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQ 248

Query: 274 FYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD--- 330
            YK G+    CG   D  V  VG+G      G  Y LIKNSWG  WGE GYIRI R    
Sbjct: 249 LYKGGIFEGPCGTKVDGAVTAVGYGK---SGGKGYILIKNSWGTAWGEKGYIRIKRAPGN 305

Query: 331 -EGLCGIATEASYPV 344
             G+CG+   + YP 
Sbjct: 306 SPGVCGLYKSSYYPT 320
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.79
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.74
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.47
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.4
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.31
3erv_A236 Putative C39-like peptidase; structural genomics, 81.03
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=4.4e-86  Score=625.58  Aligned_cols=308  Identities=40%  Similarity=0.761  Sum_probs=270.8

Q ss_pred             hccCCCCCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCC
Q 019112           27 VVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGY  106 (346)
Q Consensus        27 ~~~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~  106 (346)
                      -+..++.+++.+.++|++|+++|+|.|.+.+|+.+|++||++|+++|++||++. .+|++|+|+|+|||.+||++++++.
T Consensus        51 y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~-~sy~~g~N~FaDlT~eEf~~~~~~~  129 (363)
T 3tnx_A           51 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKEKYTGS  129 (363)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC-CSEEECSCTTTTSCHHHHHHHHSCS
T ss_pred             CChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEeccccccCCHHHHHHHhccc
Confidence            345667889999999999999999999999999999999999999999999974 8999999999999999999999886


Q ss_pred             CCCCCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhc
Q 019112          107 NRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDC  186 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c  186 (346)
                      .+........  ...........+||++||||++|+||||||||.||||||||+++++|++++++++.++.||+|+|+||
T Consensus       130 ~~~~~~~~~~--~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC  207 (363)
T 3tnx_A          130 IAGNYTTTEL--SYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDC  207 (363)
T ss_dssp             SCSCCCCSSS--SSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHH
T ss_pred             cccccccccc--ccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcc
Confidence            6543211111  01111122234799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEE
Q 019112          187 STDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVE  266 (346)
Q Consensus       187 ~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~  266 (346)
                      +..+.||+||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++..++.++++|||+|+++
T Consensus       208 ~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~  286 (363)
T 3tnx_A          208 DRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLE  286 (363)
T ss_dssp             CTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEEC
T ss_pred             cCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEE
Confidence            9989999999999999999875 999999999999888887664555567788888888888999999999999999999


Q ss_pred             eccccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCccee
Q 019112          267 ASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASY  342 (346)
Q Consensus       267 ~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~  342 (346)
                      +...+|++|++|||..+|+..++|||+|||||+       +|||||||||++|||+|||||+||.    |.|||+++|+|
T Consensus       287 a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-------~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y  359 (363)
T 3tnx_A          287 AAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-------NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY  359 (363)
T ss_dssp             CCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET-------TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred             ecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC-------CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence            877899999999999999988999999999985       4999999999999999999999995    56999999999


Q ss_pred             eee
Q 019112          343 PVA  345 (346)
Q Consensus       343 p~~  345 (346)
                      |+.
T Consensus       360 Pik  362 (363)
T 3tnx_A          360 PVK  362 (363)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            983
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 346
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-77
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-67
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 3e-67
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 6e-67
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 6e-66
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 1e-65
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 1e-65
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 1e-63
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 1e-63
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-63
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 5e-63
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 9e-63
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 6e-62
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 8e-62
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-61
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-59
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 2e-55
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-54
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 5e-52
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 3e-49
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 4e-07
d3gcba_ 458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 0.002
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 3e-06
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  239 bits (609), Expect = 1e-77
 Identities = 132/320 (41%), Positives = 185/320 (57%), Gaps = 19/320 (5%)

Query: 35  EPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEF 91
           + S+  +  +W A H R Y    E+  R  ++++N++ IE  N+E   G  ++ +  N F
Sbjct: 5   DHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAF 63

Query: 92  SDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGH 151
            D+T+EEFR    G+    P           F+     + P S+DWREKG VT +KNQG 
Sbjct: 64  GDMTSEEFRQVMNGFQNRKPRKG------KVFQEPLFYEAPRSVDWREKGYVTPVKNQGQ 117

Query: 152 CGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMDKAFEYIIENK 209
           CGSCWAFSA  A+EG      G+LI LSEQ LVDCS    N GC+GGLMD AF+Y+ +N 
Sbjct: 118 CGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG 177

Query: 210 GLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAV-TKQPVSVCVEAS 268
           GL +E  YPY+  + +C    + + A             E AL++AV T  P+SV ++A 
Sbjct: 178 GLDSEESYPYEATEESCKYNPKYSVA--NDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235

Query: 269 GQAFRFYKRGVLN-AECG-DNCDHGVAVVGFGT-AEEEDGAKYWLIKNSWGETWGESGYI 325
            ++F FYK G+    +C  ++ DHGV VVG+G  + E D  KYWL+KNSWGE WG  GY+
Sbjct: 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 295

Query: 326 RILRD-EGLCGIATEASYPV 344
           ++ +D    CGIA+ ASYP 
Sbjct: 296 KMAKDRRNHCGIASAASYPT 315
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.77
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.7
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 96.24
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 96.18
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-79  Score=573.18  Aligned_cols=303  Identities=44%  Similarity=0.863  Sum_probs=260.5

Q ss_pred             CchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCCC
Q 019112           34 HEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRPV  110 (346)
Q Consensus        34 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~  110 (346)
                      -++.++++|++||++|+|.|.+ +|+.+|+.||.+|+++|++||++   ++.+|++|+|+|+|||.|||.+++++..++.
T Consensus         4 ~~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~   82 (316)
T d1cs8a_           4 FDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRK   82 (316)
T ss_dssp             CCGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCC
T ss_pred             ccHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhccccccc
Confidence            4577889999999999999977 57789999999999999999986   4579999999999999999999987665443


Q ss_pred             CCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC-
Q 019112          111 PSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD-  189 (346)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~-  189 (346)
                      ...      ..........+||++||||++|+++||||||.||||||||+++++|++++++++..+.||+|+|+||+.. 
T Consensus        83 ~~~------~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~  156 (316)
T d1cs8a_          83 PRK------GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ  156 (316)
T ss_dssp             CSC------CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGG
T ss_pred             ccc------CccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccc
Confidence            211      1111223345799999999999999999999999999999999999999999999999999999999864 


Q ss_pred             -CCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEe
Q 019112          190 -NNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEA  267 (346)
Q Consensus       190 -~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~  267 (346)
                       +.+|.||.+..|++|+..++++.+|..+||......|... .......+..+.... .+.+.|+++|. +|||++++++
T Consensus       157 ~~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~  234 (316)
T d1cs8a_         157 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDA  234 (316)
T ss_dssp             TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECC
T ss_pred             cCCCCCCCchHHHHHHHHhcCcccccccccccccccccccc-ccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEe
Confidence             6789999999999999998668899999999988888765 334455566666665 57888888887 7999999999


Q ss_pred             ccccccccCCceEeCC-CC-CCCCeeEEEEEeeccc-cCCCccEEEEEcCCCCCcCcCceEEEEcC-CCcccccCcceee
Q 019112          268 SGQAFRFYKRGVLNAE-CG-DNCDHGVAVVGFGTAE-EEDGAKYWLIKNSWGETWGESGYIRILRD-EGLCGIATEASYP  343 (346)
Q Consensus       268 ~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~-~~~g~~ywivkNSWG~~WGe~Gy~~i~~~-~~~cgi~~~~~~p  343 (346)
                      ...+|++|++|||..+ |+ ..++|||+|||||.+. ..+|.+|||||||||++|||+|||||+|+ .|.|||++.++||
T Consensus       235 ~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~yP  314 (316)
T d1cs8a_         235 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP  314 (316)
T ss_dssp             CSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred             ccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeeeee
Confidence            8778999999999876 66 4679999999999763 24689999999999999999999999998 5999999999999


Q ss_pred             ee
Q 019112          344 VA  345 (346)
Q Consensus       344 ~~  345 (346)
                      ++
T Consensus       315 ~v  316 (316)
T d1cs8a_         315 TV  316 (316)
T ss_dssp             CC
T ss_pred             eC
Confidence            86
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure