Citrus Sinensis ID: 019158

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRSRGKQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccEEcccEEEEcccccccccccccccccccccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccHHHHHccccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccEEccEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHHccHHHHHHHHHHHHHHccccEEEcccccccccccccHccccccccccccccccccccccccccccEEEccccHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
msllnpkisspfpfphslhsppqskfhklfpsqplnlptaattklyslsplqqepdylllqnedrvigdclvfeegvfedpylendnvppprkprrsrgkqnvVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRvekkkqgylplnslDLKEYLAYKEAKlsqlnpplvldkpstfptdakeseedrdcgfqdfvnsssstctqrvppknpkwavygrglddvseffnsgnydppdkksdgprrklfTKEEKVLLNKKlphlatatskkwlplhslaasgEFYFVDALLkhnvdinavdkdGLTALHKAIIGKKQAVTNYLLresanpfvvdevmwk
Flexible Loop (DISEMBL)
msllnpkisspfpfpHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEgvfedpylendnvppprkprrsrgkqnvvqveaenlvpdkwkQVQEELNLTKKEKRQIALqiefgsrvekkkqgylpLNSLDLKEYLAYKEAKlsqlnpplvldkpSTFPTDAKESEEDRDCGFQDFvnsssstctqrvppknpkWAVYGRGLDDVSEFfnsgnydppdkksdgprRKLFTKEEKVLlnkklphlatatskkwlPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLResanpfvvdevmwk
Low Complexity Region (SEG)
MSLLNPKIsspfpfphslhsppqsKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDNVppprkprrsrGKQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK
Disordered region (IsUnstruct)
******************************************TKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYL************************************************QIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKL***************************************************WAVYGRGLDDVSEFF************************KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVM**
Disordered Region (DISOPRED)
*******ISS***************************************************NEDRVIGDCLVFEEGVFEDPY*****************************V*DKWKQVQE*LNL*****RQI**QIEF*SRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSS*****QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV**EVMWK
Disordered Region (DISEMBL)
MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDN***************VVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTF************CGFQDFVN***********PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK
Disordered Region (DISPRO)
*********SP*****SLHS***S*F*********NLPTAATT*****************QNEDRVIGDCLVFEEGVFEDPYLEN************************NLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPS******************************RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDK*SDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE*MW*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRSRGKQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
Q05753	435	Ankyrin repeat domain-con	yes	no	0.898	0.712	0.520	5e-92
Q9SQK3	315	Ankyrin repeat domain-con	no	no	0.255	0.279	0.471	4e-15
Q5EA33	238	Ankyrin repeat domain-con	yes	no	0.214	0.310	0.351	2e-05
Q9SM23	338	Acyl-CoA-binding domain-c	no	no	0.179	0.183	0.338	2e-05
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	yes	no	0.220	0.038	0.350	5e-05
Q8WVL7	239	Ankyrin repeat domain-con	yes	no	0.220	0.317	0.342	6e-05
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	no	0.220	0.017	0.337	0.0002
Q9Z2X3	231	26S proteasome non-ATPase	yes	no	0.171	0.255	0.406	0.0002
Q9STP8	354	Acyl-CoA-binding domain-c	no	no	0.179	0.175	0.338	0.0002
Q54KA7	986	Ankyrin repeat, PH and SE	yes	no	0.330	0.115	0.322	0.0004

>sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2

 Score =  338 bits (866), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 36/346 (10%)

Query: 1   MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL 60
           +SLL P+ +SP     SLHS         FP++  +L  ++ T +         PD    
Sbjct: 10  ISLLLPR-TSPSRLSPSLHSLA-------FPTRLRSLSYSSQTSIL--------PD---- 49

Query: 61  QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRS--RG---KQNVVQVEAENLVPDK 115
             +D ++GDCLV+E+GVFEDPYL+ +     ++ R+   RG   + +  ++E ENLVP++
Sbjct: 50  AGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNRRGGAKRLDESEIEPENLVPEE 109

Query: 116 WKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPP 175
           W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL  +DL ++L YKEAKL+QL P 
Sbjct: 110 WRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKLAQLRP- 168

Query: 176 LVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF 235
           ++LDKP  F  D+  S +           ++ S+ ++RV PKNP+WAVYG+G D V++FF
Sbjct: 169 VILDKPGNFSDDSGASSDG---------ETAVSSPSERVAPKNPRWAVYGKGFDHVAKFF 219

Query: 236 NSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA 295
           NS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+
Sbjct: 220 NSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDS 278

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct: 279 LLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDD 324

Involved in the initial differentiation of the proplastid during the embryo development and in plastid differentiation linked to cell differentiation, morphogenesis and organogenesis during the plant life cycle.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SQK3|EM506_ARATH Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 253 KLFTKEEKVLLNK-KLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL 311
           +L   EE+V+L + + P+L   ++K W PL +LA S +   +D L+++ +DI+ VDKD  
Sbjct: 127 QLLEPEERVILQQNEKPNLKMISTKSWKPLQTLALSMQIQLMDNLIENGLDIDDVDKDNQ 186

Query: 312 TALHKAIIGKKQAVTNYLLRESANPFVVD 340
           TALHKAIIGKK+AV ++LLR+ ANP + D
Sbjct: 187 TALHKAIIGKKEAVISHLLRKGANPHLQD 215

Involved in the initial differentiation of the proplastid during the embryo development. Also required for correct cotyledon, true leaf and cauline leaf margin development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5EA33|ANR49_BOVIN Ankyrin repeat domain-containing protein 49 OS=Bos taurus GN=ANKRD49 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
           LL+++  H+ T    K+ PLH  A +G    V  L+ H  D++AV  DG T LH A    
Sbjct: 92  LLSERATHVNTRDEDKYTPLHRAAYNGHLDVVRELIAHGADVHAVTVDGWTPLHSACKWN 151

Query: 322 KQAVTNYLLRESAN 335
              V ++LL+  A+
Sbjct: 152 NARVASFLLQHDAD 165

Bos taurus (taxid: 9913)

>sp|Q9SM23|ACBP1_ARATH Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 38/62 (61%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH     G     +AL+  N D+NA D +G T+LH A++ +++A+  +L+++ A+  + 
Sbjct: 254 PLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIK 313

Query: 340 DE 341
           DE
Sbjct: 314 DE 315

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with arachidonyl-CoA, barely with oleoyl-CoA, but not with palmitoyl-CoA. Confers tolerance and binds to lead ions Pb(2+), probably by promoting lead translocation from roots to shoots. May function as an intracellular carrier of acyl-CoA esters.

Arabidopsis thaliana (taxid: 3702)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           +VL+N+   H+   T   + PLH     G    V+ LL+H+  +NA  K+G TALH+A  
Sbjct: 697 EVLVNQG-AHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQ 755

Query: 320 GKKQAVTNYLLRESANP 336
                + N LL+ +A+P
Sbjct: 756 QGHTHIINVLLQNNASP 772

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q8WVL7|ANR49_HUMAN Ankyrin repeat domain-containing protein 49 OS=Homo sapiens GN=ANKRD49 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           + LL++K  H+ T    ++ PLH  A SG    V  L+    D++AV  DG T LH A  
Sbjct: 91  RRLLSEKATHVNTRDEDEYTPLHRAAYSGHLDIVQELIAQGADVHAVTVDGWTPLHSACK 150

Query: 320 GKKQAVTNYLLRESAN 335
                V ++LL+  A+
Sbjct: 151 WNNTRVASFLLQHDAD 166

Homo sapiens (taxid: 9606)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           +VL+N+   H+   T   + PLH     G    V+ LL+H+  +NA  K+G T LH+A  
Sbjct: 714 EVLVNQGA-HVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQ 772

Query: 320 GKKQAVTNYLLRESANP 336
                + N LL+ +A+P
Sbjct: 773 QGHTHIINVLLQNNASP 789

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

>sp|Q9Z2X3|PSD10_RAT 26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus GN=Psmd10 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 32/59 (54%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W PLH  A++G    V ALL     +NAV+++G TALH A    +  +   LL   ANP
Sbjct: 74  WSPLHIAASAGRDEIVKALLIKGAQVNAVNQNGCTALHYAASKNRHEIAVMLLEGGANP 132

Acts as an oncoprotein by being involved in negative regulation of tumor suppressors RB1 and p53/TP53. Overexpression is leading to phosphorylation of RB1 and proteasomal degradation of RB1. Regulates CDK4-mediated phosphorylation of RB1 by competing with CDKN2A for binding with CDK4. Facilitates binding of MDM2 to p53/TP53 and the mono- and polyubiquitination of p53/TP53 by MDM2 suggesting a function in targeting the TP53:MDM2 complex to the 26S proteasome. Involved in p53-independent apoptosis. Involved in regulation of NF-kappa-B by retaining it in the cytoplasm. Binds to the NF-kappa-B component RELA and accelerates its XPO1/CRM1-mediated nuclear export.

Rattus norvegicus (taxid: 10116)

>sp|Q9STP8|ACBP2_ARATH Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH     G       L+  N D+NA D +G T LH A++  ++A+  +L++++AN    
Sbjct: 269 PLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAK 328

Query: 340 DE 341
           DE
Sbjct: 329 DE 330

Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with palmitoyl-CoA, but not with oleoyl-CoA. Binds to lead ions (Pb). May function as an intracellular carrier of acyl-CoA esters. Required for proper phospholipid and, to a lower extent, galactolipid composition.

Arabidopsis thaliana (taxid: 3702)

>sp|Q54KA7|SECG_DICDI Ankyrin repeat, PH and SEC7 domain containing protein secG OS=Dictyostelium discoideum GN=secG PE=2 SV=1

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 7/121 (5%)

Query: 220 KWAVYGRGLDDVSEFFNSGNYD--PPDKKSDGPRRK--LFTKEEKVL--LNKKLPHLATA 273
           +WA     L+ +      G  D    D K+  P  K  LF   E VL  LN K    A  
Sbjct: 107 QWASSRGHLECIKLLVEKGGVDVNTKDDKNGTPLHKASLFASAECVLYLLNGKADPRAVT 166

Query: 274 TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES 333
           T+ +  PLH  +A G    V+ L+K +  +NAVD D +T LH+A      +  + LL++ 
Sbjct: 167 TNGE-TPLHHASAGGNPQCVELLIKADSKVNAVDNDCITPLHQASFSGHSSCVSLLLKKG 225

Query: 334 A 334
           A
Sbjct: 226 A 226

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
449434110	431	PREDICTED: ankyrin repeat domain-contain	0.788	0.631	0.610	5e-92
255579606	446	aberrant large forked product, putative	0.846	0.654	0.597	2e-91
297794407	354	AKRP/EMB2036 [Arabidopsis lyrata subsp.	0.820	0.799	0.570	2e-90
166744	439	ankyrin repeat-containing protein [Arabi	0.898	0.706	0.526	2e-90
30698188	435	ankyrin repeat domain-containing protein	0.898	0.712	0.520	3e-90
42573808	359	ankyrin repeat domain-containing protein	0.898	0.863	0.520	4e-90
26450056	435	unknown protein [Arabidopsis thaliana]	0.898	0.712	0.514	3e-88
356496593	442	PREDICTED: ankyrin repeat domain-contain	0.921	0.719	0.553	6e-87
356540848	444	PREDICTED: ankyrin repeat domain-contain	0.918	0.713	0.548	1e-86
359496151	406	PREDICTED: ankyrin repeat domain-contain	0.768	0.652	0.600	1e-85

>gi|449434110|ref|XP_004134839.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic-like [Cucumis sativus] gi|449491289|ref|XP_004158851.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic-like [Cucumis sativus]

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 177/290 (61%), Positives = 226/290 (77%), Gaps = 18/290 (6%)

Query: 54  EPDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPR--RSRGKQNVVQVEAENL 111
           +PD L    ED VIGDC++FE+ VF+DPY+ +D+      P   +S+ K  VV++  ENL
Sbjct: 56  QPDEL----EDFVIGDCVIFEDDVFDDPYVSDDSSVDNSIPSTAKSKPKSAVVEINPENL 111

Query: 112 VPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQ 171
           VPD+WK+VQ E+N+TKKE+R+IA ++EFGSRVEKKK+G +PL S++L+EYL+YKEAK++Q
Sbjct: 112 VPDEWKEVQAEINITKKERRKIAQEMEFGSRVEKKKKGLVPLRSVNLEEYLSYKEAKMAQ 171

Query: 172 LNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDV 231
           L P LVLD P++FP     +EE    G +D ++ SS    +RV PKNPKWAVYGRGL+DV
Sbjct: 172 LKP-LVLDNPTSFPA----TEEVN--GAEDAMSRSS----ERVAPKNPKWAVYGRGLEDV 220

Query: 232 SEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFY 291
           SEFFNSG Y P D+KS+GPR KLF+KEEK +LNK++P LA+A S  WLPLH+L  SGEFY
Sbjct: 221 SEFFNSGQYQPADRKSEGPR-KLFSKEEKAMLNKRVPDLASARSDMWLPLHTLVGSGEFY 279

Query: 292 FVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
            VD LLK+NVDIN VDK G TALH+AI+ KKQA+TNYLLRESANPFV D+
Sbjct: 280 LVDELLKNNVDINGVDKVGFTALHRAIVAKKQAITNYLLRESANPFVRDK 329

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579606|ref|XP_002530644.1| aberrant large forked product, putative [Ricinus communis] gi|223529817|gb|EEF31752.1| aberrant large forked product, putative [Ricinus communis]

 Score =  342 bits (877), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/313 (59%), Positives = 240/313 (76%), Gaps = 21/313 (6%)

Query: 44  KLYSLSPLQQEPDYLLLQNED-------RVIGDCLVFEEGVFEDPYLEN------DNVPP 90
           K YS+SP  Q      +QN+D        VIGDCLVFEEG FE PYLEN      D    
Sbjct: 41  KFYSVSPSLQSS--FPIQNDDYDSAVEEHVIGDCLVFEEGAFEGPYLENASSSVLDQESD 98

Query: 91  PRKPRRSRGKQN---VVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKK 147
           P++  +++ K+    V+++EAENLVPDKW++VQ E+N+TKKE+R+IA ++EF SRVEKKK
Sbjct: 99  PKQKTKNKNKKKKKNVIEIEAENLVPDKWREVQAEINITKKERRKIAQELEFNSRVEKKK 158

Query: 148 QGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSS 207
           +G  P+ +L+L+EY AY+EAKL+QL P LVLD PS+F  + ++  E+ +   ++ V  S 
Sbjct: 159 KGLRPIRALNLEEYKAYREAKLAQLKP-LVLDNPSSFQVEKEDENEEEEEKEKEKVEMSE 217

Query: 208 STCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKL 267
           S C++RV PKNP+WAVYG+G DDV+EFFNSG+Y+P  K S+G RRKLFT+EEK+LLN+K+
Sbjct: 218 S-CSERVAPKNPRWAVYGKGFDDVNEFFNSGHYEPGVKNSEG-RRKLFTQEEKLLLNRKI 275

Query: 268 PHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTN 327
           P +A ATS KWLPLHSLAASGEFY VDALLKHNVDINA++ DGLTALHKAI+ KKQA+T 
Sbjct: 276 PDVAAATSGKWLPLHSLAASGEFYLVDALLKHNVDINALNVDGLTALHKAILCKKQAITG 335

Query: 328 YLLRESANPFVVD 340
           YLLRESANPFV+D
Sbjct: 336 YLLRESANPFVLD 348

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794407|ref|XP_002865088.1| AKRP/EMB2036 [Arabidopsis lyrata subsp. lyrata] gi|297310923|gb|EFH41347.1| AKRP/EMB2036 [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/305 (57%), Positives = 224/305 (73%), Gaps = 22/305 (7%)

Query: 43  TKLYSLSPLQQE---PDYLLLQNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRSRG 99
           T+L SLS   Q    PD      +D ++GDCLV+E+GVFEDPYLE +     ++ R  RG
Sbjct: 35  TRLRSLSYSSQTSILPD----AGDDFIVGDCLVYEDGVFEDPYLETEVTQVAKQKRNPRG 90

Query: 100 ---KQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSL 156
              + +  ++E ENLVP++W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL ++
Sbjct: 91  GAKRLDESEIEPENLVPEEWRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRNV 150

Query: 157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPP 216
           DL ++L YKEAKL+QL P + LDKP  F   A  S+ +          ++ S  ++RV P
Sbjct: 151 DLNDFLTYKEAKLAQLRP-VTLDKPGNFSDHAASSDGE----------TAVSPSSERVAP 199

Query: 217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSK 276
           KNP+WAVYG+G D V++FFNS  YDP  KKSDGPR KL +KEEK +LN + P LA ATSK
Sbjct: 200 KNPRWAVYGKGFDHVAKFFNSDKYDPSVKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSK 258

Query: 277 KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           KWLPLH+LAASGEFY VD+LLKHN+DINA D  GLTALH+AIIGKKQA+TNYLLRESANP
Sbjct: 259 KWLPLHTLAASGEFYLVDSLLKHNLDINATDVGGLTALHRAIIGKKQAITNYLLRESANP 318

Query: 337 FVVDE 341
           FV+D+
Sbjct: 319 FVLDD 323

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166744|gb|AAA32812.1| ankyrin repeat-containing protein [Arabidopsis thaliana]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/346 (52%), Positives = 241/346 (69%), Gaps = 36/346 (10%)

Query: 1   MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL 60
           +SLL P  +SP     SLHS        +FP++  +L  ++ T +         PD    
Sbjct: 39  ISLLLPG-TSPSRLSPSLHS-------LVFPTRLRSLSYSSQTSIL--------PD---- 78

Query: 61  QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRS--RG---KQNVVQVEAENLVPDK 115
             +D ++GDCLV+E+GVFEDPYLE +     ++ R+   RG   + +  ++E ENLVP++
Sbjct: 79  AGDDFIVGDCLVYEDGVFEDPYLEKEVTQVAKQERKKNRRGGAKRLDESEIEPENLVPEE 138

Query: 116 WKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPP 175
           W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL  +DL ++L YKEAKL+QL P 
Sbjct: 139 WRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKLAQLRP- 197

Query: 176 LVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF 235
           ++LDKP  F  D   S +           ++ S+ ++RV PKNP+WAVYG+G D V++FF
Sbjct: 198 VILDKPGNFSDDFGASSDG---------ETAVSSPSERVAPKNPRWAVYGKGFDHVAKFF 248

Query: 236 NSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA 295
           NS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+
Sbjct: 249 NSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDS 307

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           LLKHN+DINA D  GLTALH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct: 308 LLKHNLDINATDVGGLTALHRAIIGKKQAITNYLLRESANPFVLDD 353

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30698188|ref|NP_569027.2| ankyrin repeat domain-containing protein [Arabidopsis thaliana] gi|27151762|sp|Q05753.2|AKRP_ARATH RecName: Full=Ankyrin repeat domain-containing protein, chloroplastic; Short=AKRP; AltName: Full=Protein EMBRYO DEFECTIVE 2036; Flags: Precursor gi|15450523|gb|AAK96554.1| At5g66060/K2A8_13 [Arabidopsis thaliana] gi|24111371|gb|AAN46809.1| At5g66060/K2A8_13 [Arabidopsis thaliana] gi|222422842|dbj|BAH19408.1| AT5G66055 [Arabidopsis thaliana] gi|332010768|gb|AED98151.1| ankyrin repeat domain-containing protein [Arabidopsis thaliana]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 36/346 (10%)

Query: 1   MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL 60
           +SLL P+ +SP     SLHS         FP++  +L  ++ T +         PD    
Sbjct: 10  ISLLLPR-TSPSRLSPSLHSLA-------FPTRLRSLSYSSQTSIL--------PD---- 49

Query: 61  QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRS--RG---KQNVVQVEAENLVPDK 115
             +D ++GDCLV+E+GVFEDPYL+ +     ++ R+   RG   + +  ++E ENLVP++
Sbjct: 50  AGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNRRGGAKRLDESEIEPENLVPEE 109

Query: 116 WKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPP 175
           W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL  +DL ++L YKEAKL+QL P 
Sbjct: 110 WRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKLAQLRP- 168

Query: 176 LVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF 235
           ++LDKP  F  D+  S +           ++ S+ ++RV PKNP+WAVYG+G D V++FF
Sbjct: 169 VILDKPGNFSDDSGASSDG---------ETAVSSPSERVAPKNPRWAVYGKGFDHVAKFF 219

Query: 236 NSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA 295
           NS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+
Sbjct: 220 NSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDS 278

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct: 279 LLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDD 324

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42573808|ref|NP_975000.1| ankyrin repeat domain-containing protein [Arabidopsis thaliana] gi|332010769|gb|AED98152.1| ankyrin repeat domain-containing protein [Arabidopsis thaliana]

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 36/346 (10%)

Query: 1   MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL 60
           +SLL P+ +SP     SLHS         FP++  +L  ++ T +         PD    
Sbjct: 10  ISLLLPR-TSPSRLSPSLHSLA-------FPTRLRSLSYSSQTSIL--------PD---- 49

Query: 61  QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRS--RG---KQNVVQVEAENLVPDK 115
             +D ++GDCLV+E+GVFEDPYL+ +     ++ R+   RG   + +  ++E ENLVP++
Sbjct: 50  AGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNRRGGAKRLDESEIEPENLVPEE 109

Query: 116 WKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPP 175
           W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL  +DL ++L YKEAKL+QL P 
Sbjct: 110 WRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKLAQLRP- 168

Query: 176 LVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF 235
           ++LDKP  F  D+  S +           ++ S+ ++RV PKNP+WAVYG+G D V++FF
Sbjct: 169 VILDKPGNFSDDSGASSDG---------ETAVSSPSERVAPKNPRWAVYGKGFDHVAKFF 219

Query: 236 NSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA 295
           NS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+
Sbjct: 220 NSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDS 278

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct: 279 LLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDD 324

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26450056|dbj|BAC42148.1| unknown protein [Arabidopsis thaliana]

 Score =  331 bits (849), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 36/346 (10%)

Query: 1   MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL 60
           +SLL P+ +SP     SLHS         FP++  +L  ++ T +         PD    
Sbjct: 10  ISLLLPR-TSPSRLSPSLHSLA-------FPTRLRSLSYSSQTSIL--------PD---- 49

Query: 61  QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRS--RG---KQNVVQVEAENLVPDK 115
             +D ++GDCLV+E+GVFEDPYL+ +     ++ R+   RG   + +  ++E EN VP++
Sbjct: 50  AGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNRRGGAKRLDESEIEPENPVPEE 109

Query: 116 WKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPP 175
           W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG + L  +DL ++L YKEAKL+QL P 
Sbjct: 110 WRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIQLRKVDLNDFLTYKEAKLAQLRP- 168

Query: 176 LVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF 235
           ++LDKP  F  D+  S +           ++ S+ ++RV PKNP+WAVYG+G D V++FF
Sbjct: 169 VILDKPGNFSDDSGASSDG---------ETAVSSPSERVAPKNPRWAVYGKGFDHVAKFF 219

Query: 236 NSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA 295
           NS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+
Sbjct: 220 NSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDS 278

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D+
Sbjct: 279 LLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDD 324

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496593|ref|XP_003517151.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic-like [Glycine max]

 Score =  327 bits (838), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 187/338 (55%), Positives = 232/338 (68%), Gaps = 20/338 (5%)

Query: 13  PFPHSLHSP-PQSKFHKLFPSQPLNLPTAATTKLYSLSP-LQQEPDYLLLQNEDRVIGDC 70
           P PH+   P P      L  SQ L  P      L S+SP L   P Y    +ED VIGDC
Sbjct: 11  PQPHTFLFPLPFFTSRNLQLSQTLQFPR--NWNLRSISPSLHPTPQYD--DSEDHVIGDC 66

Query: 71  LVFEEGVFEDPYLEN-----DNVP---PPRKPRRSRGKQNVVQVEAENLVPDKWKQVQEE 122
           +VFE+GVF++P   N     DN+    P  KPR S  K+ V +   ENLVPDKW++VQ E
Sbjct: 67  VVFEDGVFDEPLFHNHHHNPDNLTVDKPKPKPRPSWRKK-VEETLGENLVPDKWREVQAE 125

Query: 123 LNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPS 182
           +N+TK+E R+IA ++EF S+VEKK++G +PL  ++L +Y AYKEAKL+Q+    +LD  S
Sbjct: 126 INITKREMRKIAREVEFNSKVEKKRRGLIPLRDMNLDDYKAYKEAKLAQMK---LLDYSS 182

Query: 183 TFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDP 242
           +FP D    E   + G + F   +     +RV PKNP+WAVYGRGL+DV+EFFNS NYDP
Sbjct: 183 SFPVDENVPEPQLNRG-EKFEAEAELDGGERVAPKNPRWAVYGRGLEDVTEFFNSDNYDP 241

Query: 243 PDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD 302
              K+ G RRKLF KEEKVLLNK++P LA ATS KWLPLH+LAA GEF+ +D+LLKHNVD
Sbjct: 242 T-AKTPGGRRKLFNKEEKVLLNKRIPDLAAATSDKWLPLHTLAACGEFHLLDSLLKHNVD 300

Query: 303 INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
           INAVDKDGLTALH+A IGKKQA+ NYLLR SANPFV D
Sbjct: 301 INAVDKDGLTALHRATIGKKQAIINYLLRNSANPFVQD 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540848|ref|XP_003538896.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic-like [Glycine max]

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 187/341 (54%), Positives = 238/341 (69%), Gaps = 24/341 (7%)

Query: 13  PFPHSLHSP-PQSKFHKLFPSQPLNLPTAATTKLYSLSP-LQQEPDYLLLQNEDRVIGDC 70
           P PH+   P P S    L  SQ L+ P      L SLSP L    D     ++D VIGDC
Sbjct: 11  PQPHNFLFPLPVSTSRNLPLSQTLHFPR--NWNLRSLSPSLHLTYD----DSDDHVIGDC 64

Query: 71  LVFEEGVFEDP-----YLENDNVP---PPRKPRRSRGKQNVVQVEAENLVPDKWKQVQEE 122
           +VFE+GVF++P     +L +DN+    P  KP RS  K+ V +   ENLVPDKW++VQ E
Sbjct: 65  VVFEDGVFDEPVFHNHHLNSDNLAVDKPKPKPGRSWRKK-VEETLGENLVPDKWREVQAE 123

Query: 123 LNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPS 182
           +N+TK+E R+IA ++EF S+VEKK++G +PL  ++L +Y AYKEAKL+Q+    +LD  S
Sbjct: 124 INITKREMRKIAREVEFNSKVEKKRRGLIPLRDMNLDDYKAYKEAKLAQMK---LLDYAS 180

Query: 183 TFPT--DAKESEEDRDCGFQDFVNSSSS-TCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN 239
             P   +  E+E + + G ++   +       +RV PKNP+WAVYGRGL+DV+EFFNS N
Sbjct: 181 CSPVGQNVPEAEPEFNRGGEEVAEAEPELNAGERVEPKNPRWAVYGRGLEDVTEFFNSDN 240

Query: 240 YDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH 299
           YDP   K+ G RRKLF KEEKVLLNK++P LA ATS KWLPLH+LAA GEFY +D+LLKH
Sbjct: 241 YDPT-AKTLGGRRKLFNKEEKVLLNKRIPDLAAATSDKWLPLHTLAACGEFYLLDSLLKH 299

Query: 300 NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
           NVDINAVD+DGLTALH+AIIGKKQA+TNYLLR SANPFV D
Sbjct: 300 NVDINAVDRDGLTALHRAIIGKKQAITNYLLRNSANPFVQD 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496151|ref|XP_003635163.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic isoform 2 [Vitis vinifera]

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 167/278 (60%), Positives = 213/278 (76%), Gaps = 13/278 (4%)

Query: 67  IGDCLVFEEGVFEDPYLENDNVPPPRKPRRSRGKQNVVQVEAENLVPDKWKQVQEELNLT 126
           IGDCLVFEEGVFEDPYL+++     + P+ ++     +++E ENLVP+KWK+VQE++N+T
Sbjct: 73  IGDCLVFEEGVFEDPYLQDNFDFNAQNPKHNKPN---LEIEPENLVPEKWKEVQEQINIT 129

Query: 127 KKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPT 186
           KKE+R+IA Q+E+GSRVEK+KQG +P++  D   Y +Y+E KL+QL P LVLDKP++FP 
Sbjct: 130 KKERRKIAQQLEYGSRVEKRKQGLVPISQED---YSSYRETKLAQLKP-LVLDKPTSFPV 185

Query: 187 DAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKK 246
             + +E     G      + +   + RV P+NP+ AVYG  L+D+SEFFNSG Y P    
Sbjct: 186 KEEAAEAAPVEG------NPNEPTSSRVVPRNPRRAVYGGTLEDISEFFNSGTYQPGGNA 239

Query: 247 SDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAV 306
           +    RKLFTKEEK+LLNK++P LA ATS KWLPLH+LAASGEFY +DALLKHNVDINAV
Sbjct: 240 ATQGPRKLFTKEEKLLLNKRIPDLAAATSGKWLPLHTLAASGEFYLMDALLKHNVDINAV 299

Query: 307 DKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW 344
           DKDGLTALHKAIIGKKQA+TNYLLRESANP+V D+  W
Sbjct: 300 DKDGLTALHKAIIGKKQAITNYLLRESANPYVRDKDGW 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
TAIR|locus:505006718	435	AKRP "ankyrin repeat protein"	0.840	0.666	0.560	8e-85
TAIR|locus:2173767	315	EMB506 "embryo defective 506"	0.313	0.342	0.431	3.3e-15
UNIPROTKB|Q5EA33	238	ANKRD49 "Ankyrin repeat domain	0.214	0.310	0.351	5e-05
UNIPROTKB|Q8WVL7	239	ANKRD49 "Ankyrin repeat domain	0.310	0.447	0.313	8.7e-05
UNIPROTKB|F1P1R3	189	PSMD10 "Uncharacterized protei	0.182	0.333	0.396	0.00014
UNIPROTKB|Q2KI59	151	PSMD10 "Proteasome (Prosome, m	0.182	0.417	0.380	0.00016
UNIPROTKB|F1STJ8	239	ANKRD49 "Uncharacterized prote	0.214	0.309	0.351	0.00019
TAIR|locus:2178426	338	ACBP1 "acyl-CoA binding protei	0.179	0.183	0.338	0.00025
UNIPROTKB|Q9BR61	282	ACBD6 "Acyl-CoA-binding domain	0.547	0.670	0.264	0.0003
DICTYBASE|DDB_G0287459	986	secG "Arf guanyl-nucleotide ex	0.327	0.114	0.336	0.00055

TAIR|locus:505006718 AKRP "ankyrin repeat protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 172/307 (56%), Positives = 220/307 (71%)

Query:    40 AATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLEND--NVXXXXXXXXX 97
             A  T+L SLS    +   L    +D ++GDCLV+E+GVFEDPYL+ +   V         
Sbjct:    30 AFPTRLRSLS-YSSQTSILPDAGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNR 88

Query:    98 XG---KQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLN 154
              G   + +  ++E ENLVP++W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL 
Sbjct:    89 RGGAKRLDESEIEPENLVPEEWRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLR 148

Query:   155 SLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRV 214
              +DL ++L YKEAKL+QL P ++LDKP  F  D+  S +         V+S S    +RV
Sbjct:   149 KVDLNDFLTYKEAKLAQLRP-VILDKPGNFSDDSGASSDGETA-----VSSPS----ERV 198

Query:   215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATAT 274
              PKNP+WAVYG+G D V++FFNS  YDP DKKSDGPR KL +KEEK +LN + P LA AT
Sbjct:   199 APKNPRWAVYGKGFDHVAKFFNSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVAT 257

Query:   275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
             SKKWLPLH+LAA GEFY VD+LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESA
Sbjct:   258 SKKWLPLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESA 317

Query:   335 NPFVVDE 341
             NPFV+D+
Sbjct:   318 NPFVLDD 324

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS;IMP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2173767 EMB506 "embryo defective 506" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 50/116 (43%), Positives = 73/116 (62%)

Query:   229 DD--VSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLL--NKKLPHLATATSKKWLPLHSL 284
             DD  V +   + NY+    K      +L   EE+V+L  N+K P+L   ++K W PL +L
Sbjct:   104 DDSRVQKLTTTDNYEEELAKEV---EQLLEPEERVILQQNEK-PNLKMISTKSWKPLQTL 159

Query:   285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
             A S +   +D L+++ +DI+ VDKD  TALHKAIIGKK+AV ++LLR+ ANP + D
Sbjct:   160 ALSMQIQLMDNLIENGLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKGANPHLQD 215

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0010027 "thylakoid membrane organization" evidence=RCA

UNIPROTKB|Q5EA33 ANKRD49 "Ankyrin repeat domain-containing protein 49" [Bos taurus (taxid:9913)]

 Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query:   262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
             LL+++  H+ T    K+ PLH  A +G    V  L+ H  D++AV  DG T LH A    
Sbjct:    92 LLSERATHVNTRDEDKYTPLHRAAYNGHLDVVRELIAHGADVHAVTVDGWTPLHSACKWN 151

Query:   322 KQAVTNYLLRESAN 335
                V ++LL+  A+
Sbjct:   152 NARVASFLLQHDAD 165

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q8WVL7 ANKRD49 "Ankyrin repeat domain-containing protein 49" [Homo sapiens (taxid:9606)]

 Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 36/115 (31%), Positives = 52/115 (45%)

Query:   229 DDVSEFFNSGNYDPPDKKSD-GPRRKLFTKEEKV-------LLNKKLPHLATATSKKWLP 280
             D+  +  N   Y   +KK +  P R L    EK        LL++K  H+ T    ++ P
Sbjct:    52 DEEQDDKNEEWYRLQEKKMEKDPSRLLLWAAEKNRLTTVRRLLSEKATHVNTRDEDEYTP 111

Query:   281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             LH  A SG    V  L+    D++AV  DG T LH A       V ++LL+  A+
Sbjct:   112 LHRAAYSGHLDIVQELIAQGADVHAVTVDGWTPLHSACKWNNTRVASFLLQHDAD 166

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0005634 "nucleus" evidence=IC

UNIPROTKB|F1P1R3 PSMD10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
 Identities = 25/63 (39%), Positives = 33/63 (52%)

Query:   278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
             W PLH  A++G    V AL+     INAV+++G T LH A    KQ +   LL   A+P 
Sbjct:    37 WTPLHIAASAGRDEIVKALIDKGAPINAVNQNGCTPLHYAASKNKQEIAIMLLENGADPD 96

Query:   338 VVD 340
               D
Sbjct:    97 ATD 99

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008540 "proteasome regulatory particle, base subcomplex" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0045111 "intermediate filament cytoskeleton" evidence=IEA

GO:0045737 "positive regulation of cyclin-dependent protein kinase activity" evidence=IEA

GO:0070682 "proteasome regulatory particle assembly" evidence=IEA

GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA

UNIPROTKB|Q2KI59 PSMD10 "Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 10" [Bos taurus (taxid:9913)]

 Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
 Identities = 24/63 (38%), Positives = 32/63 (50%)

Query:   278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
             W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP 
Sbjct:    74 WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 133

Query:   338 VVD 340
               D
Sbjct:   134 AKD 136

GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA

GO:0070682 "proteasome regulatory particle assembly" evidence=IEA

GO:0045737 "positive regulation of cyclin-dependent protein kinase activity" evidence=IEA

GO:0045111 "intermediate filament cytoskeleton" evidence=IEA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0008540 "proteasome regulatory particle, base subcomplex" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|F1STJ8 ANKRD49 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query:   262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
             LL++K  H+ T    ++ PLH  A SG    V  L+ +  D++AV  DG T LH A    
Sbjct:    93 LLSEKATHVNTRDEDEYTPLHRAAYSGHLDVVRELIANGADVHAVTVDGWTPLHSACKWN 152

Query:   322 KQAVTNYLLRESAN 335
                V ++LL+  A+
Sbjct:   153 NTRVASFLLQHDAD 166

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2178426 ACBP1 "acyl-CoA binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
 Identities = 21/62 (33%), Positives = 38/62 (61%)

Query:   280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
             PLH     G     +AL+  N D+NA D +G T+LH A++ +++A+  +L+++ A+  + 
Sbjct:   254 PLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIK 313

Query:   340 DE 341
             DE
Sbjct:   314 DE 315

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010288 "response to lead ion" evidence=IEP;IMP

GO:0032791 "lead ion binding" evidence=IDA

GO:0006629 "lipid metabolic process" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0070300 "phosphatidic acid binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008289 "lipid binding" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010162 "seed dormancy process" evidence=IMP

GO:1900140 "regulation of seedling development" evidence=IMP

GO:0000062 "fatty-acyl-CoA binding" evidence=IDA

UNIPROTKB|Q9BR61 ACBD6 "Acyl-CoA-binding domain-containing protein 6" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 55/208 (26%), Positives = 82/208 (39%)

Query:   148 QGYLPLNSLD--LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED-RDCG------ 198
             QG + + S +  L  Y  YK+ K+   N P    KPS F  + K+  E  +  G      
Sbjct:    54 QGLIQVASREQLLYLYARYKQVKVGNCNTP----KPSFFDFEGKQKWEAWKALGDSSPSQ 109

Query:   199 -FQDF---VNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKS-DGPRRK 253
               Q++   V         ++P K  K A  G G   +S  ++       DK   D  R  
Sbjct:   110 AMQEYIAVVKKLDPGWNPQIPEKKGKEANTGFGGPVISSLYHEETIREEDKNIFDYCREN 169

Query:   254 LFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA 313
                   K + +K +         + L LH     G    V  LL+H  DIN  D +G TA
Sbjct:   170 NIDHITKAIKSKNVDVNVKDEEGRAL-LHWACDRGHKELVTVLLQHRADINCQDNEGQTA 228

Query:   314 LHKAIIGKKQAVTNYLLRESANPFVVDE 341
             LH A   +   +   LL+  A+P + D+
Sbjct:   229 LHYASACEFLDIVELLLQSGADPTLRDQ 256

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

DICTYBASE|DDB_G0287459 secG "Arf guanyl-nucleotide exchange factor" [Dictyostelium discoideum (taxid:44689)]

 Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
 Identities = 41/122 (33%), Positives = 58/122 (47%)

Query:   220 KWAVYGRG-LDDVSEFFNSGNYD--PPDKKSDGPRRK--LFTKEEKVL--LNKKLPHLAT 272
             +WA   RG L+ +      G  D    D K+  P  K  LF   E VL  LN K    A 
Sbjct:   107 QWAS-SRGHLECIKLLVEKGGVDVNTKDDKNGTPLHKASLFASAECVLYLLNGKADPRAV 165

Query:   273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
              T+ +  PLH  +A G    V+ L+K +  +NAVD D +T LH+A      +  + LL++
Sbjct:   166 TTNGE-TPLHHASAGGNPQCVELLIKADSKVNAVDNDCITPLHQASFSGHSSCVSLLLKK 224

Query:   333 SA 334
              A
Sbjct:   225 GA 226

GO:0031589 "cell-substrate adhesion" evidence=IMP

GO:0006935 "chemotaxis" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q05753	AKRP_ARATH	No assigned EC number	0.5202	0.8985	0.7126	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AKRP	AKRP (ANKYRIN REPEAT PROTEIN); protein binding; ANKYRIN REPEAT PROTEIN (AKRP); FUNCTIONS IN- protein binding; INVOLVED IN- embryonic development ending in seed dormancy; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Ankyrin (InterPro-IPR002110); BEST Arabidopsis thaliana protein match is- EMB506 (embryo defective 506); protein binding (TAIR-AT5G40160.1); Has 70206 Blast hits to 22501 proteins in 882 species- Archae - 85; Bacteria - 4541; Metazoa - 37898; Fungi - 4361; Plants - 1873; Viruses - 1166; Other Euka [...] (435 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	EMB506	EMB506 (embryo defective 506); protein binding; Encodes ankyrin repeat protein EMB506. ; Involv [...] (315 aa)			•	•	•		•	•	0.898
	AT4G37130	hydroxyproline-rich glycoprotein family protein; hydroxyproline-rich glycoprotein family protei [...] (513 aa)							•		0.599
	AT5G66000	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (215 aa)							•		0.536
	AT5G65370	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; [...] (295 aa)							•		0.536
	AT5G60370	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (413 aa)							•		0.536
	OEP7	OEP7 (OUTER ENVELOPE MEMBRANE PROTEIN 7); encodes a 7 kDa chloroplast outer envelope membrane p [...] (64 aa)							•		0.534
	AT1G67700	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (231 aa)				•					0.527
	AT3G19190	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (1861 aa)							•		0.508
	emb2394	emb2394 (embryo defective 2394); structural constituent of ribosome; embryo defective 2394 (emb [...] (223 aa)				•			•		0.508
	AT3G09890	ankyrin repeat family protein; ankyrin repeat family protein; FUNCTIONS IN- protein binding; IN [...] (206 aa)			•						0.502

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	345
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-12
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-11
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-04
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-04
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	0.001

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 22/62 (35%), Positives = 31/62 (50%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A++G    V  LL++  D+NA D DG T LH A       +   LL + A+    
Sbjct: 10  PLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR 69

Query: 340 DE 341
           D+
Sbjct: 70  DK 71

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 60.1 bits (146), Expect = 2e-11
 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           K+LL      +    +    PLH  A +G    V  LL+   D+NA DKDG T LH A  
Sbjct: 24  KLLLENG-ADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82

Query: 320 GKKQAVTNYLLRESANPFVVD 340
                V   LL+  A+    D
Sbjct: 83  NGNLDVVKLLLKHGADVNARD 103

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 24/65 (36%), Positives = 30/65 (46%)

Query: 276 KKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
                LH  A +G    V  LL+H  D+NA DKDG TALH A       +   LL   A+
Sbjct: 27  DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGAD 86

Query: 336 PFVVD 340
             + D
Sbjct: 87  INLKD 91

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 28/71 (39%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           K+LL K    +         PLH  A +G    V  LLKH  D+NA DKDG T LH A  
Sbjct: 57  KLLLEKG-ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115

Query: 320 GKKQAVTNYLL 330
                V   LL
Sbjct: 116 NGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 23/53 (43%), Positives = 25/53 (47%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
              LH  A SG    V  LL+  VDIN  D+DG TALH A       V   LL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 19/49 (38%), Positives = 25/49 (51%)

Query: 293 VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
           V+ LL + V IN  D  G T LH A+         YLL   ANP +V++
Sbjct: 175 VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNK 223

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 304 NAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
           NA D+DG T LH A       V   LL   A+    D
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKD 37

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 23/56 (41%), Positives = 24/56 (42%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
           LL      L         PLH  A  G    V  LLK  VD+N  D DGLTAL  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 296 LLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW 344
           LL+H  +D+NA D +G T LH A       +  +LL+   +  + D    
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGL 50

Length = 56

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 31/71 (43%)

Query: 258 EEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
            E +L      HLA       LPLHS A+ G+   V  LL    D+NA D DG T LH A
Sbjct: 54  SELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLA 113

Query: 318 IIGKKQAVTNY 328
            +       N 
Sbjct: 114 ALNGNPPEGNI 124

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
           LH  A +G    V  LL+   D+N  D D  TALH A       +   LL   A+    D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 341 E 341
           +
Sbjct: 59  K 59

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 280 PLHSLAA--SGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
           PLHS+A   S +   V  LL   + INA ++ G T LH A +         L+   A+  
Sbjct: 225 PLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADIN 284

Query: 338 VVDE 341
            V  
Sbjct: 285 AVSS 288

Length = 471

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 269 HLATATSKKWLPLHSLAASG-EFYFVDALLKHNVDINAVDKDGLTALHKAIIGK--KQAV 325
            +       + PLH    +      +  L+K   D+NA DK G T LH  + G      V
Sbjct: 75  DVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKV 134

Query: 326 TNYLLRESANPFVVDE 341
              LLR+ A+   +D 
Sbjct: 135 IRLLLRKGADVNALDL 150

Length = 471

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.94
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.93
PHA02859	209	ankyrin repeat protein; Provisional	99.91
PHA02791	284	ankyrin-like protein; Provisional	99.91
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.89
PHA03100	480	ankyrin repeat protein; Provisional	99.89
PHA02791	284	ankyrin-like protein; Provisional	99.89
KOG0508	615	consensus Ankyrin repeat protein [General function	99.89
PHA02875	413	ankyrin repeat protein; Provisional	99.89
PHA02874	434	ankyrin repeat protein; Provisional	99.89
PHA02874	434	ankyrin repeat protein; Provisional	99.88
PHA02875	413	ankyrin repeat protein; Provisional	99.88
PHA03095	471	ankyrin-like protein; Provisional	99.88
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.87
PHA02878	477	ankyrin repeat protein; Provisional	99.87
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.87
PHA02946	446	ankyin-like protein; Provisional	99.87
PHA02878	477	ankyrin repeat protein; Provisional	99.86
PHA03100	480	ankyrin repeat protein; Provisional	99.86
PHA02743	166	Viral ankyrin protein; Provisional	99.86
PHA02946	446	ankyin-like protein; Provisional	99.86
PHA02876	682	ankyrin repeat protein; Provisional	99.86
PHA02989	494	ankyrin repeat protein; Provisional	99.85
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.85
PHA02798	489	ankyrin-like protein; Provisional	99.84
PHA03095	471	ankyrin-like protein; Provisional	99.84
PHA02859	209	ankyrin repeat protein; Provisional	99.84
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.83
PHA02876	682	ankyrin repeat protein; Provisional	99.83
PHA02989	494	ankyrin repeat protein; Provisional	99.82
KOG0510	929	consensus Ankyrin repeat protein [General function	99.81
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.81
PHA02741	169	hypothetical protein; Provisional	99.81
PHA02736	154	Viral ankyrin protein; Provisional	99.81
KOG0514	452	consensus Ankyrin repeat protein [General function	99.8
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.8
PHA02795	437	ankyrin-like protein; Provisional	99.8
KOG0508	615	consensus Ankyrin repeat protein [General function	99.8
PHA02798	489	ankyrin-like protein; Provisional	99.8
PHA02917	661	ankyrin-like protein; Provisional	99.79
PHA02795	437	ankyrin-like protein; Provisional	99.78
PHA02917	661	ankyrin-like protein; Provisional	99.77
PHA02884	300	ankyrin repeat protein; Provisional	99.77
KOG0510	929	consensus Ankyrin repeat protein [General function	99.77
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.76
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.75
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.73
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.73
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.72
PHA02730	672	ankyrin-like protein; Provisional	99.72
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.69
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.69
PHA02730	672	ankyrin-like protein; Provisional	99.68
PHA02741	169	hypothetical protein; Provisional	99.68
PHA02743	166	Viral ankyrin protein; Provisional	99.68
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.68
PHA02884	300	ankyrin repeat protein; Provisional	99.67
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.66
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.63
PHA02792	631	ankyrin-like protein; Provisional	99.63
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.62
PHA02736	154	Viral ankyrin protein; Provisional	99.61
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.6
KOG0514	452	consensus Ankyrin repeat protein [General function	99.6
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.58
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.58
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.57
PHA02792	631	ankyrin-like protein; Provisional	99.55
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.49
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.47
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.47
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.47
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.46
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.46
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.45
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.45
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.4
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.37
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.29
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.29
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.27
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.23
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.23
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.19
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.17
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.16
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.05
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.01
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.79
PF13606	30	Ank_3: Ankyrin repeat	98.74
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.73
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.68
PF13606	30	Ank_3: Ankyrin repeat	98.67
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.65
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.64
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.63
KOG0522	560	consensus Ankyrin repeat protein [General function	98.51
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.36
KOG2384	223	consensus Major histocompatibility complex protein	98.3
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.17
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.15
KOG0511	516	consensus Ankyrin repeat protein [General function	98.11
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.04
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.03
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.0
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.94
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.9
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.88
KOG0522	560	consensus Ankyrin repeat protein [General function	97.75
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	97.64
KOG2384	223	consensus Major histocompatibility complex protein	97.44
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.3
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.02
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.02
KOG0511	516	consensus Ankyrin repeat protein [General function	96.99
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.84
KOG2505	591	consensus Ankyrin repeat protein [General function	96.71
KOG2505	591	consensus Ankyrin repeat protein [General function	96.47
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.55
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	85.3
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	82.82

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=1.3e-26  Score=199.10  Aligned_cols=164  Identities=23%  Similarity=0.264  Sum_probs=144.8

Q ss_pred             hhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHh
Q 019158          146 KKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYG  225 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~  225 (345)
                      +..|.+|+|-       |+.-|+.+.+.  +++..+....                        +..+-.||||||.|+.
T Consensus        35 dqD~Rt~LHw-------a~S~g~~eiv~--fLlsq~nv~~------------------------ddkDdaGWtPlhia~s   81 (226)
T KOG4412|consen   35 DQDGRTPLHW-------ACSFGHVEIVY--FLLSQPNVKP------------------------DDKDDAGWTPLHIAAS   81 (226)
T ss_pred             cccCCceeee-------eeecCchhHHH--HHHhcCCCCC------------------------CCccccCCchhhhhhh
Confidence            3478899976       55567766664  5554443222                        2234579999999999


Q ss_pred             CCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 019158          226 RGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLK  298 (345)
Q Consensus       226 ~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~  298 (345)
                      .|+.++|+.|+.+ |+|+|..+ ..|.|+||||+      ++.+|+.+|+.++.+|..|.||||-|+.-|.++++++|+.
T Consensus        82 ~g~~evVk~Ll~r~~advna~t-n~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~  160 (226)
T KOG4412|consen   82 NGNDEVVKELLNRSGADVNATT-NGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLIS  160 (226)
T ss_pred             cCcHHHHHHHhcCCCCCcceec-CCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHh
Confidence            9999999999988 99999999 99999999997      7899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          299 HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       299 ~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      .|+.+|.+|..|+||||.|..-|+.++..+|+++||+++..|+.|
T Consensus       161 ~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~  205 (226)
T KOG4412|consen  161 QGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG  205 (226)
T ss_pred             cCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC
Confidence            999999999999999999988999999999999999999999987

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=2.9e-26  Score=196.93  Aligned_cols=131  Identities=24%  Similarity=0.230  Sum_probs=124.8

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHH-hCCCCCCCCCCCCCCCcchHHH------HHHHHHhc-CCCCccCCCCCCcHHHHHH
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFN-SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKK-LPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl-~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~-gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+|+||||.||..|+.+++.+|+ +.+..+|.+| ..||||||.|+      +++-|+.+ |+++|..++.|+|+||||+
T Consensus        36 qD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkD-daGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAa  114 (226)
T KOG4412|consen   36 QDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKD-DAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAA  114 (226)
T ss_pred             ccCCceeeeeeecCchhHHHHHHhcCCCCCCCcc-ccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhh
Confidence            36999999999999999999999 6688999999 99999999986      67878777 9999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|..+++++|+++|+.|+.+|..|.||||-|+..|+..++++|+..|+.+|.+|..|+|
T Consensus       115 gK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~T  174 (226)
T KOG4412|consen  115 GKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFT  174 (226)
T ss_pred             cCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCcc
Confidence            999999999999999999999999999999999999999999999999999999999998

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.91  E-value=7.6e-24  Score=191.61  Aligned_cols=162  Identities=10%  Similarity=0.064  Sum_probs=139.4

Q ss_pred             hcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhC
Q 019158          147 KQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR  226 (345)
Q Consensus       147 ~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~  226 (345)
                      ++++.|+       +.|+..|+++.++ .|+..    ..                         ..+..|.||||.|+.+
T Consensus        19 ~~~~~pL-------~~A~~~~~~~~vk-~Li~~----~n-------------------------~~~~~g~TpLh~a~~~   61 (209)
T PHA02859         19 YRYCNPL-------FYYVEKDDIEGVK-KWIKF----VN-------------------------DCNDLYETPIFSCLEK   61 (209)
T ss_pred             hccCcHH-------HHHHHhCcHHHHH-HHHHh----hh-------------------------ccCccCCCHHHHHHHc
Confidence            4556676       6689999999998 77642    11                         1233589999998864


Q ss_pred             --CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH---------HHHHHHhcCCCCccCCCCCCcHHHHHHH--cCCHHHH
Q 019158          227 --GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE---------EKVLLNKKLPHLATATSKKWLPLHSLAA--SGEFYFV  293 (345)
Q Consensus       227 --~~~evvklLl~~gadin~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d~~G~TpLh~Aa~--~g~~eiv  293 (345)
                        ++.+++++|+++|++++.++...|.||||+|+         ++++|+++|++++.+|..|.||||+|+.  .++.+++
T Consensus        62 ~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv  141 (209)
T PHA02859         62 DKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVI  141 (209)
T ss_pred             CCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHH
Confidence              48999999999999999997248999999863         6789999999999999999999999986  4689999


Q ss_pred             HHHHhCCCCCcccCCCCCCHHHH-HHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          294 DALLKHNVDINAVDKDGLTALHK-AIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       294 ~~LL~~Gadin~~d~~G~TpLh~-Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++.+|..|+|
T Consensus       142 ~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~t  194 (209)
T PHA02859        142 KLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYN  194 (209)
T ss_pred             HHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            99999999999999999999996 56788999999999999999999999987

>PHA02791 ankyrin-like protein; Provisional

Probab=99.91  E-value=3.3e-23  Score=195.58  Aligned_cols=131  Identities=11%  Similarity=0.035  Sum_probs=103.3

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCC-CcchHHH------HHHHHHhcCCCCccCC-CCCCcHH
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPR-RKLFTKE------EKVLLNKKLPHLATAT-SKKWLPL  281 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~-TpLh~Aa------i~~lLl~~gadvn~~d-~~G~TpL  281 (345)
                      ...+..|+||||.|+..++.+++++|+++|++++.++ ..|+ ||||+|+      ++++|++++++.  .| ..|+|||
T Consensus        88 n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~-~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpL  164 (284)
T PHA02791         88 SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG-KTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCI  164 (284)
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccC-CCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHH
Confidence            3345568888888888888888888888888888777 6664 7888775      567788776543  22 2478888


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          282 HSLAASGEFYFVDALLKHNVDINAVDKDGLTA-LHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~~Gadin~~d~~G~Tp-Lh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      |+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..|+.+++++|+++|++++.+|..|
T Consensus       165 h~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~  227 (284)
T PHA02791        165 HITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN  227 (284)
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC
Confidence            88888888888888888888888888888876 888888888888888888888888888754

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.89  E-value=3.7e-23  Score=206.02  Aligned_cols=161  Identities=19%  Similarity=0.057  Sum_probs=137.3

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      +.+.|.+.|+++.++ .++......+.                         ..+..|.|+||-|+.++..+++++|+++
T Consensus        47 ~~v~A~q~G~l~~v~-~lve~~g~~v~-------------------------~~D~~g~tlLHWAAiNNrl~v~r~li~~  100 (600)
T KOG0509|consen   47 DIVKATQYGELETVK-ELVESEGESVN-------------------------NPDREGVTLLHWAAINNRLDVARYLISH  100 (600)
T ss_pred             hhhhHhhcchHHHHH-HHHhhcCcCCC-------------------------CCCcCCccceeHHHHcCcHHHHHHHHHc
Confidence            478899999999999 88876533332                         1222677888777777999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |+++|......+.||||||+      ++.+|+++|||++.+|.+|.+|||+||+.|+.-+|.+||.+|+++|.+|.+|+|
T Consensus       101 gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grT  180 (600)
T KOG0509|consen  101 GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT  180 (600)
T ss_pred             CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC
Confidence            99999988677889999997      689999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCC
Q 019158          313 ALHKAIIGKKQAVTNYLLRESANPFVVD-EVMWK  345 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~Gad~n~~d-~~G~T  345 (345)
                      |||+|+..|+...++.||..|+.+..+| ..|.|
T Consensus       181 pLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~T  214 (600)
T KOG0509|consen  181 PLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNT  214 (600)
T ss_pred             HHHHHHHhcccHHHHHHHHhcccccccccccCCc
Confidence            9999999998888899999999998888 77776

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.89  E-value=3.5e-22  Score=200.80  Aligned_cols=175  Identities=22%  Similarity=0.209  Sum_probs=149.7

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHH--HhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCC
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAY--KEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQ  212 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~--~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~  212 (345)
                      -++.|... .....|.+|++       .|+  ..|+.+.++ .|+..... +                         ...
T Consensus        92 Ll~~ga~i~~~d~~g~tpL~-------~A~~~~~~~~~iv~-~Ll~~g~~-~-------------------------~~~  137 (480)
T PHA03100         92 LLEYGANVNAPDNNGITPLL-------YAISKKSNSYSIVE-YLLDNGAN-V-------------------------NIK  137 (480)
T ss_pred             HHHCCCCCCCCCCCCCchhh-------HHHhcccChHHHHH-HHHHcCCC-C-------------------------Ccc
Confidence            34566666 55567888884       366  788888887 66654322 1                         224


Q ss_pred             CCCCCcHHHHHHhCC--cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCC------C
Q 019158          213 RVPPKNPKWAVYGRG--LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKK------W  278 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~--~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G------~  278 (345)
                      +..|.||||.|+..+  +.+++++|+++|++++.++ ..|.||||+|+      ++++|+++|++++..+..|      .
T Consensus       138 ~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d-~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~  216 (480)
T PHA03100        138 NSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKN-RYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFE  216 (480)
T ss_pred             CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccccc-CCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHH
Confidence            456899999999999  9999999999999999999 89999999986      6899999999999999888      8


Q ss_pred             cHHHHHHHcCC--HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          279 LPLHSLAASGE--FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       279 TpLh~Aa~~g~--~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+..|+  .+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~t  285 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDT  285 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCc
Confidence            99999999999  99999999999999999999999999999999999999999999999999999987

>PHA02791 ankyrin-like protein; Provisional

Probab=99.89  E-value=2.5e-22  Score=189.68  Aligned_cols=163  Identities=13%  Similarity=0.091  Sum_probs=139.9

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .+...|.+|+       +.|++.|+.+.++ .|+..... ..                           ...++||||.|
T Consensus        25 ~~D~~G~TpL-------h~Aa~~g~~eiv~-~Ll~~ga~-~n---------------------------~~d~~TpLh~A   68 (284)
T PHA02791         25 KADVHGHSAL-------YYAIADNNVRLVC-TLLNAGAL-KN---------------------------LLENEFPLHQA   68 (284)
T ss_pred             CCCCCCCcHH-------HHHHHcCCHHHHH-HHHHCcCC-Cc---------------------------CCCCCCHHHHH
Confidence            4566788887       4588899998887 66644221 11                           11368999999


Q ss_pred             HhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCC-cHHHHHHHcCCHHHHHHH
Q 019158          224 YGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKW-LPLHSLAASGEFYFVDAL  296 (345)
Q Consensus       224 ~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~-TpLh~Aa~~g~~eiv~~L  296 (345)
                      +..|+.+++++|+++|++++.++ ..|+||||+|+      ++++|+.+|++++.++..|+ ||||+|+..|+.+++++|
T Consensus        69 a~~g~~eiV~lLL~~Gadvn~~d-~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~L  147 (284)
T PHA02791         69 ATLEDTKIVKILLFSGMDDSQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF  147 (284)
T ss_pred             HHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHH
Confidence            99999999999999999999999 99999999997      68999999999999999986 899999999999999999


Q ss_pred             HhCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          297 LKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       297 L~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++|.+.  .| ..|.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus       148 L~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t  195 (284)
T PHA02791        148 LSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI  195 (284)
T ss_pred             HhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCC
Confidence            9997653  23 35899999999999999999999999999999998875

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.89  E-value=5.9e-23  Score=197.91  Aligned_cols=175  Identities=18%  Similarity=0.143  Sum_probs=150.8

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      ..+..|.+|+-.       |+|.|+.+.++ .|+........       .-..++|          ++++..|.+|||+|
T Consensus        37 ~~~~~g~tPL~i-------aaRnGH~~vVe-yLle~~~a~~e-------~~GsV~F----------Dge~IegappLWaA   91 (615)
T KOG0508|consen   37 GEVQNGGTPLLI-------AARNGHADVVE-YLLEHCRASPE-------QGGSVRF----------DGETIEGAPPLWAA   91 (615)
T ss_pred             ccccCCCCceee-------ehhcCcHHHHH-HHHHHhcCCcc-------CCceEEe----------CCcccCCCchhhHH
Confidence            344567788844       77999999997 66665543332       1123444          67888999999999


Q ss_pred             HhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 019158          224 YGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALL  297 (345)
Q Consensus       224 ~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL  297 (345)
                      +..||.++|++|+++|+++|..+ ....|||-.||      ++++|+++|+|++..|++|.|.||+||..|+.+++++|+
T Consensus        92 saAGHl~vVk~L~~~ga~VN~tT-~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLl  170 (615)
T KOG0508|consen   92 SAAGHLEVVKLLLRRGASVNDTT-RTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLL  170 (615)
T ss_pred             hccCcHHHHHHHHHhcCcccccc-ccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHH
Confidence            99999999999999999999988 78889999987      789999999999999999999999999999999999999


Q ss_pred             hCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          298 KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       298 ~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.|+|+|.++..|+|+||.|+..|+.+++++|+.+|+.+.. |..|.|
T Consensus       171 e~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~Gmt  217 (615)
T KOG0508|consen  171 EQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMT  217 (615)
T ss_pred             HhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCCc
Confidence            99999999999999999999999999999999999998865 344765

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.89  E-value=3.3e-22  Score=197.68  Aligned_cols=181  Identities=14%  Similarity=0.005  Sum_probs=115.8

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc----------cccCcccccCCCCCCCCCCCCCCcHHHHHHhCCc
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED----------RDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGL  228 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~----------~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~  228 (345)
                      .++.|++.|+++.++ .|+......-. ....+.++          +.+++.  +...+........+.||||.|+..|+
T Consensus         5 ~L~~A~~~g~~~iv~-~Ll~~g~~~n~-~~~~g~tpL~~A~~~~~~~~v~~L--l~~ga~~~~~~~~~~t~L~~A~~~g~   80 (413)
T PHA02875          5 ALCDAILFGELDIAR-RLLDIGINPNF-EIYDGISPIKLAMKFRDSEAIKLL--MKHGAIPDVKYPDIESELHDAVEEGD   80 (413)
T ss_pred             HHHHHHHhCCHHHHH-HHHHCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHH--HhCCCCccccCCCcccHHHHHHHCCC
Confidence            478899999999998 77765432211 11111111          111111  11111111222345566666666666


Q ss_pred             HHHHHHHHhCCCCCCC-CCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 019158          229 DDVSEFFNSGNYDPPD-KKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV  301 (345)
Q Consensus       229 ~evvklLl~~gadin~-~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga  301 (345)
                      .+++++|++.|++++. .+ ..|.||||+|+      ++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+
T Consensus        81 ~~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~  159 (413)
T PHA02875         81 VKAVEELLDLGKFADDVFY-KDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA  159 (413)
T ss_pred             HHHHHHHHHcCCccccccc-CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            6666666666655433 23 56777777775      5677777777777777777777777777777777777777777


Q ss_pred             CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          302 DINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       302 din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      +++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus       160 ~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~  202 (413)
T PHA02875        160 CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGC  202 (413)
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCC
Confidence            7777777777777777777777777777777777777776664

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.89  E-value=3.5e-22  Score=199.09  Aligned_cols=132  Identities=15%  Similarity=0.126  Sum_probs=95.1

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCC-----------------------CCCCCCCCCCCCcchHHH------HHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNY-----------------------DPPDKKSDGPRRKLFTKE------EKVLL  263 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~ga-----------------------din~~d~~~G~TpLh~Aa------i~~lL  263 (345)
                      ...|.|||+.|+..++.+++++|+++|+                       +++.++ ..|.||||+|+      ++++|
T Consensus        65 ~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~-~~g~T~Lh~A~~~~~~~~v~~L  143 (434)
T PHA02874         65 NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKD-AELKTFLHYAIKKGDLESIKML  143 (434)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCC-CCCccHHHHHHHCCCHHHHHHH
Confidence            3346677777777777777777666553                       345556 67777777775      56777


Q ss_pred             HhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          264 NKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       264 l~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      +++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|
T Consensus       144 l~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g  223 (434)
T PHA02874        144 FEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNG  223 (434)
T ss_pred             HhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCC
Confidence            77777777777777777777777777777777777777777777777777777777777777777777777777777666


Q ss_pred             CC
Q 019158          344 WK  345 (345)
Q Consensus       344 ~T  345 (345)
                      +|
T Consensus       224 ~T  225 (434)
T PHA02874        224 FT  225 (434)
T ss_pred             CC
Confidence            65

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.88  E-value=6.6e-22  Score=197.17  Aligned_cols=197  Identities=19%  Similarity=0.115  Sum_probs=147.9

Q ss_pred             HhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCC
Q 019158          137 IEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       137 le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ++.|... .....|.+|+       +.|+..|+.+.++ .|+.......... ......+.+++  ++............
T Consensus        55 l~~Ga~~n~~~~~~~t~L-------~~A~~~~~~~iv~-~Ll~~g~~~~~~~-~~~~~~~~i~~--ll~~g~d~n~~~~~  123 (434)
T PHA02874         55 IKHGADINHINTKIPHPL-------LTAIKIGAHDIIK-LLIDNGVDTSILP-IPCIEKDMIKT--ILDCGIDVNIKDAE  123 (434)
T ss_pred             HHCCCCCCCCCCCCCCHH-------HHHHHcCCHHHHH-HHHHCCCCCCcch-hccCCHHHHHH--HHHCcCCCCCCCCC
Confidence            4566665 3344566665       6688899998887 6665433221100 00000011110  11112222345567


Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      |.||||.|+..|+.+++++|+++|++++.++ ..|.||||+|+      ++++|+++|++++..+..|+||||+|+..|+
T Consensus       124 g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d-~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~  202 (434)
T PHA02874        124 LKTFLHYAIKKGDLESIKMLFEYGADVNIED-DNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGD  202 (434)
T ss_pred             CccHHHHHHHCCCHHHHHHHHhCCCCCCCcC-CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence            9999999999999999999999999999999 99999999986      6899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCC-------------------------------CcccCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCC
Q 019158          290 FYFVDALLKHNVD-------------------------------INAVDKDGLTALHKAIIGK-KQAVTNYLLRESANPF  337 (345)
Q Consensus       290 ~eiv~~LL~~Gad-------------------------------in~~d~~G~TpLh~Aa~~g-~~eiv~~LL~~Gad~n  337 (345)
                      .+++++|+++|++                               ++.+|..|+||||+|+..+ +.+++++|+++|++++
T Consensus       203 ~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n  282 (434)
T PHA02874        203 YACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADIS  282 (434)
T ss_pred             HHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCC
Confidence            9999999998865                               4556677888888888765 7899999999999999


Q ss_pred             CCCCCCCC
Q 019158          338 VVDEVMWK  345 (345)
Q Consensus       338 ~~d~~G~T  345 (345)
                      .+|..|+|
T Consensus       283 ~~d~~g~T  290 (434)
T PHA02874        283 IKDNKGEN  290 (434)
T ss_pred             CCCCCCCC
Confidence            99999987

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.88  E-value=6.4e-22  Score=195.64  Aligned_cols=153  Identities=17%  Similarity=0.090  Sum_probs=133.9

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+.+.++ .|+.......                         ......|.||||.|+..++.+++++|+++|
T Consensus        72 L~~A~~~g~~~~v~-~Ll~~~~~~~-------------------------~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g  125 (413)
T PHA02875         72 LHDAVEEGDVKAVE-ELLDLGKFAD-------------------------DVFYKDGMTPLHLATILKKLDIMKLLIARG  125 (413)
T ss_pred             HHHHHHCCCHHHHH-HHHHcCCccc-------------------------ccccCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence            45677788888776 6554433211                         112335899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC-C
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL-T  312 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~-T  312 (345)
                      ++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|. |
T Consensus       126 ad~~~~~-~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t  204 (413)
T PHA02875        126 ADPDIPN-TDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVA  204 (413)
T ss_pred             CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCch
Confidence            9999999 99999999997      68999999999999999999999999999999999999999999999998875 8


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 019158          313 ALHKAIIGKKQAVTNYLLRESANPFVV  339 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~Gad~n~~  339 (345)
                      |+|+|+..|+.+++++|+++|+|++..
T Consensus       205 ~l~~A~~~~~~~iv~~Ll~~gad~n~~  231 (413)
T PHA02875        205 ALCYAIENNKIDIVRLFIKRGADCNIM  231 (413)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence            899999999999999999999999876

>PHA03095 ankyrin-like protein; Provisional

Probab=99.88  E-value=9.6e-22  Score=197.05  Aligned_cols=198  Identities=19%  Similarity=0.150  Sum_probs=147.4

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCC-ccccCchhhhcCCCCCCCCccCcccc------------cccCccc
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAK-LSQLNPPLVLDKPSTFPTDAKESEED------------RDCGFQD  201 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~-l~~lk~~ll~~~p~~~~~~~~~~e~~------------~~~~f~~  201 (345)
                      -++.|... .+...|.+|++       .|+..|+ .+.++  ++.++...+......+.++            +.+++. 
T Consensus        69 Ll~~Gadin~~~~~g~TpLh-------~A~~~~~~~~iv~--lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~L-  138 (471)
T PHA03095         69 LLEAGADVNAPERCGFTPLH-------LYLYNATTLDVIK--LLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLL-  138 (471)
T ss_pred             HHHCCCCCCCCCCCCCCHHH-------HHHHcCCcHHHHH--HHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHH-
Confidence            45567776 45567888874       3667774 55554  4444443343222222222            111111 


Q ss_pred             ccCCCCCCCCCCCCCCcHHHHHHhCC--cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCc
Q 019158          202 FVNSSSSTCTQRVPPKNPKWAVYGRG--LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLA  271 (345)
Q Consensus       202 ~v~~~~~~~~~~~~g~tpL~aA~~~~--~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn  271 (345)
                       +...+.....+..|.||+|.|+..+  ..+++++|+++|++++..+ ..|.||||+++        ++++|+.+|++++
T Consensus       139 -l~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d-~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~  216 (471)
T PHA03095        139 -LRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD-DRFRSLLHHHLQSFKPRARIVRELIRAGCDPA  216 (471)
T ss_pred             -HHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc
Confidence             1223333445667888888776544  5788888888888888887 88889998765        5688999999999


Q ss_pred             cCCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          272 TATSKKWLPLHSLAASGEF--YFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       272 ~~d~~G~TpLh~Aa~~g~~--eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+|..|+||||+|+..|+.  .++..|+.+|+++|.+|..|+||||+|+..|+.+++++|+++||+++.+|..|+|
T Consensus       217 ~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~t  292 (471)
T PHA03095        217 ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNT  292 (471)
T ss_pred             ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC
Confidence            9999999999999999874  5788999999999999999999999999999999999999999999999999987

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.87  E-value=5.3e-22  Score=197.76  Aligned_cols=193  Identities=20%  Similarity=0.155  Sum_probs=159.8

Q ss_pred             HHHHHHhhCHHHHHHHHHHHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccc
Q 019158          118 QVQEELNLTKKEKRQIALQIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRD  196 (345)
Q Consensus       118 ~~~~e~~~~kke~~~i~~~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~  196 (345)
                      ++....+.+.-++.+-+.+-| +... +.++.|...+|=       |+-.++++.+| .|+........           
T Consensus        47 ~~v~A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHW-------AAiNNrl~v~r-~li~~gadvn~-----------  106 (600)
T KOG0509|consen   47 DIVKATQYGELETVKELVESE-GESVNNPDREGVTLLHW-------AAINNRLDVAR-YLISHGADVNA-----------  106 (600)
T ss_pred             hhhhHhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeH-------HHHcCcHHHHH-HHHHcCCCccc-----------
Confidence            455566666555544444333 4444 566678888743       66688888887 77776553221           


Q ss_pred             cCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCC
Q 019158          197 CGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHL  270 (345)
Q Consensus       197 ~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadv  270 (345)
                                    ..-..+.||||-|+.+|+..++.+|+++|||++.+| .+|.++||.|+      .+.+|+.+|+++
T Consensus       107 --------------~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D-~~G~~~lHla~~~~~~~~vayll~~~~d~  171 (600)
T KOG0509|consen  107 --------------IGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKD-KQGLTPLHLAAQFGHTALVAYLLSKGADI  171 (600)
T ss_pred             --------------cCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceec-CCCCcHHHHHHHhCchHHHHHHHHhcccC
Confidence                          122568899999999999999999999999999999 99999999997      578999999999


Q ss_pred             ccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          271 ATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       271 n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |.+|..|+||||||+..|+...+..||..|+.++.+| ..|+||||+|+..|+..++.+|++.|++.+.+|.+|.|
T Consensus       172 d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~t  247 (600)
T KOG0509|consen  172 DLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKT  247 (600)
T ss_pred             CCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCC
Confidence            9999999999999999999888999999999999988 99999999999999999999777778999999999987

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.87  E-value=1.5e-21  Score=196.92  Aligned_cols=132  Identities=16%  Similarity=0.090  Sum_probs=98.9

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH----------------------------------
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE----------------------------------  258 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa----------------------------------  258 (345)
                      +..+.||||.|+..|+.+++++|++.|++++.++ ..|+||||+|+                                  
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~  112 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPD-HRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNR  112 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcC
Confidence            3456777777777777777777777777777777 77777777664                                  


Q ss_pred             ------------------------------------HHHHHHhcCCCCccCCCC-CCcHHHHHHHcCCHHHHHHHHhCCC
Q 019158          259 ------------------------------------EKVLLNKKLPHLATATSK-KWLPLHSLAASGEFYFVDALLKHNV  301 (345)
Q Consensus       259 ------------------------------------i~~lLl~~gadvn~~d~~-G~TpLh~Aa~~g~~eiv~~LL~~Ga  301 (345)
                                                          ++++|+++|++++..+.. |+||||+|+..|+.+++++|+++|+
T Consensus       113 ~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~ga  192 (477)
T PHA02878        113 NVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGA  192 (477)
T ss_pred             CHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCC
Confidence                                                234556677777777776 7777777777777777777777777


Q ss_pred             CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          302 DINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       302 din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       193 d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~T  236 (477)
T PHA02878        193 NVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNT  236 (477)
T ss_pred             CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            77777777777777777777777777777777777777777765

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.87  E-value=1.4e-21  Score=204.19  Aligned_cols=133  Identities=17%  Similarity=0.019  Sum_probs=120.1

Q ss_pred             CCCCCCcHHHHHHhCCc--HHHHHHHHhCCCCCCCCCCCCCCCcchHHH-------------------------------
Q 019158          212 QRVPPKNPKWAVYGRGL--DDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-------------------------------  258 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~--~evvklLl~~gadin~~d~~~G~TpLh~Aa-------------------------------  258 (345)
                      .+..|.||||.|+..|+  .+++++|+++|+++|.++ ..|+||||+|+                               
T Consensus       208 kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD-~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~  286 (764)
T PHA02716        208 QNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKC-VNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH  286 (764)
T ss_pred             CCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence            45579999999998885  589999999999999999 99999999642                               


Q ss_pred             ------------HHHHHHhcCCCCccCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHH-----
Q 019158          259 ------------EKVLLNKKLPHLATATSKKWLPLHSLAA--SGEFYFVDALLKHNVDINAVDKDGLTALHKAII-----  319 (345)
Q Consensus       259 ------------i~~lLl~~gadvn~~d~~G~TpLh~Aa~--~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~-----  319 (345)
                                  ++++|+++|++++.+|..|+||||+|+.  .++.+++++|+++|++++.+|..|+||||+|+.     
T Consensus       287 ~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~  366 (764)
T PHA02716        287 SYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVV  366 (764)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhh
Confidence                        3578899999999999999999999864  468999999999999999999999999999875     


Q ss_pred             ---------cCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          320 ---------GKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       320 ---------~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                               .++.+++++|+++|++++.+|..|+|
T Consensus       367 ~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~T  401 (764)
T PHA02716        367 NILDPETDNDIRLDVIQCLISLGADITAVNCLGYT  401 (764)
T ss_pred             ccccccccccChHHHHHHHHHCCCCCCCcCCCCCC
Confidence                     36899999999999999999999987

>PHA02946 ankyin-like protein; Provisional

Probab=99.87  E-value=2.4e-21  Score=194.01  Aligned_cols=173  Identities=14%  Similarity=0.051  Sum_probs=104.1

Q ss_pred             HhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCC
Q 019158          137 IEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       137 le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ++.|... .++..|.+||+.       |++.|+.+.++ .|+.. ...+.                         ..+..
T Consensus        59 l~~Gadvn~~d~~G~TpLh~-------Aa~~g~~eiv~-lLL~~-GAdin-------------------------~~d~~  104 (446)
T PHA02946         59 LHRGYSPNETDDDGNYPLHI-------ASKINNNRIVA-MLLTH-GADPN-------------------------ACDKQ  104 (446)
T ss_pred             HHCcCCCCccCCCCCCHHHH-------HHHcCCHHHHH-HHHHC-cCCCC-------------------------CCCCC
Confidence            4456666 667788888844       77888888886 55543 22222                         12334


Q ss_pred             CCcHHHHHHhCC--cHHHHHHHHhCCCCCCC-CCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          216 PKNPKWAVYGRG--LDDVSEFFNSGNYDPPD-KKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       216 g~tpL~aA~~~~--~~evvklLl~~gadin~-~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      |.||||.|+..+  ..+++++|+++|++++. .+ ..|.||||.|.     ++++|+++|++++.+|..|+||||+|+..
T Consensus       105 g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d-~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~  183 (446)
T PHA02946        105 HKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD-EEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMS  183 (446)
T ss_pred             CCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC-CCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHh
Confidence            566666554433  35566666666666664 34 56666665432     45666666666666666666666666554


Q ss_pred             CC--HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          288 GE--FYFVDALLKHNVDINAVDKDGLTALHKAIIGK--KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       288 g~--~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g--~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++  .+++++|+++|++++.+|.+|+||||+|+..|  +.+++++|+. |++++.+|..|+|
T Consensus       184 ~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~T  244 (446)
T PHA02946        184 DNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDS  244 (446)
T ss_pred             cCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCC
Confidence            33  45666666666666666666666666666654  5566666663 6666666666665

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.86  E-value=3.8e-21  Score=193.97  Aligned_cols=131  Identities=18%  Similarity=0.114  Sum_probs=122.9

Q ss_pred             CCCC-CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHH
Q 019158          212 QRVP-PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSL  284 (345)
Q Consensus       212 ~~~~-g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~A  284 (345)
                      .... |.||||.|+..|+.+++++|+++|++++..+ ..|.||||+|+      ++++|+.+|++++.+|..|+||||+|
T Consensus       163 ~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d-~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A  241 (477)
T PHA02878        163 KDRHKGNTALHYATENKDQRLTELLLSYGANVNIPD-KTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHIS  241 (477)
T ss_pred             cCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            3444 9999999999999999999999999999999 99999999987      68999999999999999999999999


Q ss_pred             HHc-CCHHHHHHHHhCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          285 AAS-GEFYFVDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       285 a~~-g~~eiv~~LL~~Gadin~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.. ++.+++++|+++|++++.++. .|.||||+|  .++.+++++|+++|+|++.+|..|+|
T Consensus       242 ~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~T  302 (477)
T PHA02878        242 VGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLT  302 (477)
T ss_pred             HHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            976 789999999999999999886 799999999  56789999999999999999999987

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.86  E-value=9.3e-21  Score=190.50  Aligned_cols=166  Identities=19%  Similarity=0.168  Sum_probs=146.7

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHH-
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWA-  222 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~a-  222 (345)
                      .....+.+|+       +.|++.|+.+.++ .|+..... +                         ......+.||+|. 
T Consensus        30 ~~~~~~~t~L-------~~A~~~~~~~ivk-~Ll~~g~~-~-------------------------~~~~~~~~t~L~~~   75 (480)
T PHA03100         30 YSYKKPVLPL-------YLAKEARNIDVVK-ILLDNGAD-I-------------------------NSSTKNNSTPLHYL   75 (480)
T ss_pred             hhhcccchhh-------hhhhccCCHHHHH-HHHHcCCC-C-------------------------CCccccCcCHHHHH
Confidence            3445666676       6688999999997 76654332 1                         1233457899999 


Q ss_pred             ----HHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC--
Q 019158          223 ----VYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLATATSKKWLPLHSLAASG--  288 (345)
Q Consensus       223 ----A~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g--  288 (345)
                          |+..++.+++++|+++|++++..+ ..|.||||+|+        ++++|+++|++++..+..|+||||+|+..|  
T Consensus        76 ~~~~a~~~~~~~iv~~Ll~~ga~i~~~d-~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  154 (480)
T PHA03100         76 SNIKYNLTDVKEIVKLLLEYGANVNAPD-NNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKI  154 (480)
T ss_pred             HHHHHHhhchHHHHHHHHHCCCCCCCCC-CCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCC
Confidence                999999999999999999999999 99999999998        689999999999999999999999999999  


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus       155 ~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  210 (480)
T PHA03100        155 DLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETL  210 (480)
T ss_pred             hHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999988773

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.86  E-value=7.9e-21  Score=165.82  Aligned_cols=130  Identities=15%  Similarity=0.040  Sum_probs=116.1

Q ss_pred             CCCCcHHHHHHhCCcH----HHHHHHHhCCCCCCCCCCCCCCCcchHHHH---------HHHHHhcCCCCccCC-CCCCc
Q 019158          214 VPPKNPKWAVYGRGLD----DVSEFFNSGNYDPPDKKSDGPRRKLFTKEE---------KVLLNKKLPHLATAT-SKKWL  279 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~----evvklLl~~gadin~~d~~~G~TpLh~Aai---------~~lLl~~gadvn~~d-~~G~T  279 (345)
                      ..+.++++.|+..|..    +++++|++.|++++.++ ..|+||||+|+.         +++|+.+|++++.++ ..|+|
T Consensus        18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d-~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~T   96 (166)
T PHA02743         18 EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYD-HHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNT   96 (166)
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccC-CCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCc
Confidence            3455666666666766    66667889999999999 999999999972         689999999999998 58999


Q ss_pred             HHHHHHHcCCHHHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          280 PLHSLAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       280 pLh~Aa~~g~~eiv~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      |||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus        97 pLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         97 LLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             HHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            9999999999999999995 8999999999999999999999999999999999999999998875

>PHA02946 ankyin-like protein; Provisional

Probab=99.86  E-value=7e-21  Score=190.69  Aligned_cols=132  Identities=12%  Similarity=0.130  Sum_probs=121.6

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCcc-CCCCCCcHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLAT-ATSKKWLPLH  282 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~-~d~~G~TpLh  282 (345)
                      .+..|.||||.|+..|+.+++++|+++|++++.+| ..|+||||+|+        ++++|+++|++++. .|..|.||||
T Consensus        68 ~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d-~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~  146 (446)
T PHA02946         68 TDDDGNYPLHIASKINNNRIVAMLLTHGADPNACD-KQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL  146 (446)
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence            45579999999999999999999999999999999 99999999875        46899999999995 6899999997


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          283 SLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK--KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g--~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                       ||..|+.+++++|+++|++++.+|..|+||||+|+..+  +.+++++|+++|++++.+|..|+|
T Consensus       147 -aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~T  210 (446)
T PHA02946        147 -ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNT  210 (446)
T ss_pred             -HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCC
Confidence             67789999999999999999999999999999998755  468999999999999999999987

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.86  E-value=3.6e-21  Score=202.22  Aligned_cols=196  Identities=16%  Similarity=0.090  Sum_probs=140.1

Q ss_pred             cCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc-----------cccCcccccCCC
Q 019158          139 FGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED-----------RDCGFQDFVNSS  206 (345)
Q Consensus       139 ~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~-----------~~~~f~~~v~~~  206 (345)
                      .|... .....|.+|+       +.|+..|+...+. +++.+....+......+.++           +.+++.  +..+
T Consensus       262 ~g~~vn~~d~~g~TpL-------h~Aa~~~~~~~iv-~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~L--l~~g  331 (682)
T PHA02876        262 AGFSVNSIDDCKNTPL-------HHASQAPSLSRLV-PKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTL--IMLG  331 (682)
T ss_pred             CCCCCCCCCCCCCCHH-------HHHHhCCCHHHHH-HHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHH--HHcC
Confidence            34444 3345677776       3466777776555 55555444443222222222           111110  1112


Q ss_pred             CCCCCCCCCCCcHHHHHHh-CCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCc
Q 019158          207 SSTCTQRVPPKNPKWAVYG-RGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWL  279 (345)
Q Consensus       207 ~~~~~~~~~g~tpL~aA~~-~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~T  279 (345)
                      +.....+..|.||||.|+. ++..+++++|++.|++++.++ ..|.||||+|+      ++++|+++|++++..+..|.|
T Consensus       332 adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d-~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T  410 (682)
T PHA02876        332 ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARD-YCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGT  410 (682)
T ss_pred             CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCc
Confidence            2223455668888877765 457888888888888888888 88888888886      678888888888888888888


Q ss_pred             HHHHHHHcCC-HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          280 PLHSLAASGE-FYFVDALLKHNVDINAVDKDGLTALHKAIIGK-KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       280 pLh~Aa~~g~-~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g-~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..| +.+++++|+++|++++.+|..|.|
T Consensus       411 ~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~t  478 (682)
T PHA02876        411 ALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQY  478 (682)
T ss_pred             hHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            8888887665 46788999999999999999999999999876 689999999999999999999987

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.85  E-value=1.5e-20  Score=190.52  Aligned_cols=132  Identities=17%  Similarity=0.093  Sum_probs=103.0

Q ss_pred             CCCCCcHHHHHHhC---CcHHHHHHHHhCCCCC-CCCCCCCCCCcchHHH--------HHHHHHhcCCCCcc-CCCCCCc
Q 019158          213 RVPPKNPKWAVYGR---GLDDVSEFFNSGNYDP-PDKKSDGPRRKLFTKE--------EKVLLNKKLPHLAT-ATSKKWL  279 (345)
Q Consensus       213 ~~~g~tpL~aA~~~---~~~evvklLl~~gadi-n~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~-~d~~G~T  279 (345)
                      +..|.|||+.|+..   ++.+++++|+++|+++ +.++ ..|+||||+|+        ++++|+++|++++. .+..|.|
T Consensus       105 d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d-~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~t  183 (494)
T PHA02989        105 TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKN-SRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLT  183 (494)
T ss_pred             CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccC-CCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCC
Confidence            34577887766543   5678888888888888 6777 77888888653        56778888888877 5677888


Q ss_pred             HHHHHHHcC----CHHHHHHHHhCCCCCc--------------------------------------ccCCCCCCHHHHH
Q 019158          280 PLHSLAASG----EFYFVDALLKHNVDIN--------------------------------------AVDKDGLTALHKA  317 (345)
Q Consensus       280 pLh~Aa~~g----~~eiv~~LL~~Gadin--------------------------------------~~d~~G~TpLh~A  317 (345)
                      |||+|+..+    +.+++++|+++|++++                                      .+|..|+||||+|
T Consensus       184 pL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~A  263 (494)
T PHA02989        184 PMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLIS  263 (494)
T ss_pred             hHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHH
Confidence            888776654    6777777777776654                                      4556799999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          318 IIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       318 a~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +..|+.+++++|+++|+|++.+|..|+|
T Consensus       264 a~~~~~~~v~~LL~~Gadin~~d~~G~T  291 (494)
T PHA02989        264 AKVDNYEAFNYLLKLGDDIYNVSKDGDT  291 (494)
T ss_pred             HHhcCHHHHHHHHHcCCCccccCCCCCC
Confidence            9999999999999999999999999987

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.85  E-value=1.9e-20  Score=200.44  Aligned_cols=157  Identities=13%  Similarity=0.081  Sum_probs=139.3

Q ss_pred             CHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 019158          157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFN  236 (345)
Q Consensus       157 ~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl  236 (345)
                      ...++.|+..|+.+.++ .++....+ .                         +..+..|.||||.|+..|+.+++++|+
T Consensus       526 ~~~L~~Aa~~g~~~~l~-~Ll~~G~d-~-------------------------n~~d~~G~TpLh~Aa~~g~~~~v~~Ll  578 (823)
T PLN03192        526 ASNLLTVASTGNAALLE-ELLKAKLD-P-------------------------DIGDSKGRTPLHIAASKGYEDCVLVLL  578 (823)
T ss_pred             hhHHHHHHHcCCHHHHH-HHHHCCCC-C-------------------------CCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence            56688899999999998 77754332 1                         224456999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC
Q 019158          237 SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDG  310 (345)
Q Consensus       237 ~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G  310 (345)
                      ++|+++|.+| ..|+||||+|+      ++++|+..++..+.  ..|.++||+|+..|+.+++++|+++|+++|.+|.+|
T Consensus       579 ~~gadin~~d-~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G  655 (823)
T PLN03192        579 KHACNVHIRD-ANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQG  655 (823)
T ss_pred             hcCCCCCCcC-CCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCC
Confidence            9999999999 99999999997      67899888876653  457799999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          311 LTALHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       311 ~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      +||||+|+..|+.+++++|+++||+++..|..|
T Consensus       656 ~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g  688 (823)
T PLN03192        656 ATALQVAMAEDHVDMVRLLIMNGADVDKANTDD  688 (823)
T ss_pred             CCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCC
Confidence            999999999999999999999999999999887

>PHA02798 ankyrin-like protein; Provisional

Probab=99.84  E-value=3.2e-20  Score=187.89  Aligned_cols=180  Identities=16%  Similarity=0.147  Sum_probs=126.1

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCC
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRV  214 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~  214 (345)
                      -++.|+.+ .+...|.+|++.+... + +...+..+.++ -|+. +...+                         +..+.
T Consensus        57 Ll~~Gadvn~~d~~g~TpL~~~~~n-~-~~~~~~~~iv~-~Ll~-~Gadi-------------------------N~~d~  107 (489)
T PHA02798         57 FINLGANVNGLDNEYSTPLCTILSN-I-KDYKHMLDIVK-ILIE-NGADI-------------------------NKKNS  107 (489)
T ss_pred             HHHCCCCCCCCCCCCCChHHHHHHh-H-HhHHhHHHHHH-HHHH-CCCCC-------------------------CCCCC
Confidence            45678887 5678899998542100 0 01134455554 4443 33222                         22344


Q ss_pred             CCCcHHHHHHhCC---cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH---------HHHHHHhcCCCCccCC-CCCCcHH
Q 019158          215 PPKNPKWAVYGRG---LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE---------EKVLLNKKLPHLATAT-SKKWLPL  281 (345)
Q Consensus       215 ~g~tpL~aA~~~~---~~evvklLl~~gadin~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d-~~G~TpL  281 (345)
                      .|.||||.|+.++   +.+++++|+++|++++.++ ..|.||||+|+         ++++|+++|++++..+ ..|.|||
T Consensus       108 ~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~L  186 (489)
T PHA02798        108 DGETPLYCLLSNGYINNLEILLFMIENGADTTLLD-KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTL  186 (489)
T ss_pred             CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHH
Confidence            6888888777654   6788888888888888888 88888888654         4678888888888774 4677888


Q ss_pred             HHHHHc----CCHHHHHHHHhCCCC---------------------------------------CcccCCCCCCHHHHHH
Q 019158          282 HSLAAS----GEFYFVDALLKHNVD---------------------------------------INAVDKDGLTALHKAI  318 (345)
Q Consensus       282 h~Aa~~----g~~eiv~~LL~~Gad---------------------------------------in~~d~~G~TpLh~Aa  318 (345)
                      |.++..    ++.+++++|+++|++                                       +|.+|..|+||||+|+
T Consensus       187 h~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~  266 (489)
T PHA02798        187 HCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSV  266 (489)
T ss_pred             HHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHH
Confidence            877654    367777777776653                                       4456677888888888


Q ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          319 IGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       319 ~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|||++.+|..|+|
T Consensus       267 ~~~~~~~v~~LL~~GAdin~~d~~G~T  293 (489)
T PHA02798        267 SHNNRKIFEYLLQLGGDINIITELGNT  293 (489)
T ss_pred             HcCcHHHHHHHHHcCCcccccCCCCCc
Confidence            888888888888888888888888887

>PHA03095 ankyrin-like protein; Provisional

Probab=99.84  E-value=4.6e-20  Score=184.88  Aligned_cols=174  Identities=18%  Similarity=0.129  Sum_probs=91.2

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhC---CccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCC
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEA---KLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCT  211 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g---~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~  211 (345)
                      -++.|..+ .+...|.+|++.       |+..|   ..+.++ .|+. ....+..                         
T Consensus        33 Ll~~ga~vn~~~~~g~t~Lh~-------a~~~~~~~~~~iv~-~Ll~-~Gadin~-------------------------   78 (471)
T PHA03095         33 LLAAGADVNFRGEYGKTPLHL-------YLHYSSEKVKDIVR-LLLE-AGADVNA-------------------------   78 (471)
T ss_pred             HHHcCCCcccCCCCCCCHHHH-------HHHhcCCChHHHHH-HHHH-CCCCCCC-------------------------
Confidence            45567766 445667888743       66666   656665 4444 3332321                         


Q ss_pred             CCCCCCcHHHHHHhCC-cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCccCCCCCCcHHH
Q 019158          212 QRVPPKNPKWAVYGRG-LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLATATSKKWLPLH  282 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~-~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~~d~~G~TpLh  282 (345)
                      ....|.||||.|+..+ ..+++++|+++|++++.++ ..|.||||+|+        ++++|+++|++++..|..|.||||
T Consensus        79 ~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~-~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~  157 (471)
T PHA03095         79 PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD-KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA  157 (471)
T ss_pred             CCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence            1224556665555555 3566666666666666655 55666666554        345555555555555555555555


Q ss_pred             HHHHcC--CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc--CCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          283 SLAASG--EFYFVDALLKHNVDINAVDKDGLTALHKAIIG--KKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       283 ~Aa~~g--~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~--g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      +|+..+  +.+++++|+++|++++..|..|+||||+|+..  ++.+++++|+++|++++.+|..|+
T Consensus       158 ~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~  223 (471)
T PHA03095        158 VLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGN  223 (471)
T ss_pred             HHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCC
Confidence            555443  34455555555555444444444444444432  334444444444444444444443

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.84  E-value=4.9e-20  Score=166.72  Aligned_cols=128  Identities=16%  Similarity=0.050  Sum_probs=115.5

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCccCC-CCCCcHHHHH
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLATAT-SKKWLPLHSL  284 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~~d-~~G~TpLh~A  284 (345)
                      ..+.|||+.|+..++.++++.|++.   ++..+ ..|.||||+|+        ++++|+++|++++.++ ..|+||||+|
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~-~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF---VNDCN-DLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh---hhccC-ccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence            3578999999999999999999975   56677 89999999874        5899999999999997 5899999998


Q ss_pred             HHc---CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHH--cCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          285 AAS---GEFYFVDALLKHNVDINAVDKDGLTALHKAII--GKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       285 a~~---g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~--~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +..   ++.+++++|+++|+++|.+|..|.||||+|+.  .++.+++++|+++|++++.+|..|.|
T Consensus        95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t  160 (209)
T PHA02859         95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNN  160 (209)
T ss_pred             HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCc
Confidence            764   47999999999999999999999999999976  46899999999999999999999986

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.83  E-value=3.5e-20  Score=193.66  Aligned_cols=132  Identities=14%  Similarity=0.071  Sum_probs=119.6

Q ss_pred             CCCCCcHHHHHHhC--CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH--------HHHHHHhcCCCCccCCCCCCcHHH
Q 019158          213 RVPPKNPKWAVYGR--GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE--------EKVLLNKKLPHLATATSKKWLPLH  282 (345)
Q Consensus       213 ~~~g~tpL~aA~~~--~~~evvklLl~~gadin~~d~~~G~TpLh~Aa--------i~~lLl~~gadvn~~d~~G~TpLh  282 (345)
                      +..|.||||+|+..  ++.+++++|+++|++++.++ ..|.||||+|+        ++++|+++|+++|.+|..|+||||
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD-~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh  252 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQN-NHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIM  252 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            45699999987643  56899999999999999999 99999999985        579999999999999999999999


Q ss_pred             HH-------------------------------------HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHH--cCCH
Q 019158          283 SL-------------------------------------AASGEFYFVDALLKHNVDINAVDKDGLTALHKAII--GKKQ  323 (345)
Q Consensus       283 ~A-------------------------------------a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~--~g~~  323 (345)
                      +|                                     +..|+.+++++|+++|++++.+|..|+||||+|+.  .++.
T Consensus       253 ~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~  332 (764)
T PHA02716        253 TYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNIST  332 (764)
T ss_pred             HHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCc
Confidence            75                                     44578899999999999999999999999999864  5688


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCC
Q 019158          324 AVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       324 eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++++|+++|++++.+|..|+|
T Consensus       333 eIVklLLe~GADIN~kD~~G~T  354 (764)
T PHA02716        333 DIIKLLHEYGNDLNEPDNIGNT  354 (764)
T ss_pred             hHHHHHHHcCCCCccCCCCCCC
Confidence            9999999999999999999987

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.83  E-value=1.3e-19  Score=190.44  Aligned_cols=129  Identities=17%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             CCcHHHHHHhCC-cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          216 PKNPKWAVYGRG-LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       216 g~tpL~aA~~~~-~~evvklLl~~gadin~~d~~~G~TpLh~Aa-------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      |.||||.|+..| ..+++++|+..|++++..+ ..|.||||+|+       ++.+|+.+|++++.+|..|+||||+|+..
T Consensus       307 g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d-~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~  385 (682)
T PHA02876        307 GETPLYLMAKNGYDTENIRTLIMLGADVNAAD-RLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVR  385 (682)
T ss_pred             CCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcc-cCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHc
Confidence            344443333333 2344444444444444444 44444444433       23444555555555555555555555555


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCC
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK-QAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~-~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|++++.+|..|+|
T Consensus       386 ~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~T  444 (682)
T PHA02876        386 NNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLST  444 (682)
T ss_pred             CCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCCh
Confidence            55555555555555555555555555555554333 33455555555555555555554

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.82  E-value=2e-19  Score=182.40  Aligned_cols=130  Identities=16%  Similarity=0.080  Sum_probs=114.6

Q ss_pred             CCCcHHHHHHhC------CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH---------HHHHHHhcCCCC-ccCCCCCC
Q 019158          215 PPKNPKWAVYGR------GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE---------EKVLLNKKLPHL-ATATSKKW  278 (345)
Q Consensus       215 ~g~tpL~aA~~~------~~~evvklLl~~gadin~~d~~~G~TpLh~Aa---------i~~lLl~~gadv-n~~d~~G~  278 (345)
                      .+.||||+|+.+      ++.+++++|+++|+++|.++ ..|.||||+|+         ++++|+++|+++ +.+|..|+
T Consensus        68 ~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d-~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~  146 (494)
T PHA02989         68 YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKT-FNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGY  146 (494)
T ss_pred             CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCC
Confidence            367999988764      35789999999999999999 99999999653         679999999999 89999999


Q ss_pred             cHHHHHHHc--CCHHHHHHHHhCCCCCcc-cCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          279 LPLHSLAAS--GEFYFVDALLKHNVDINA-VDKDGLTALHKAIIGK----KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       279 TpLh~Aa~~--g~~eiv~~LL~~Gadin~-~d~~G~TpLh~Aa~~g----~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+..  ++.+++++|+++|++++. .+..|.||||+|+..+    +.+++++|+++|++++.+|..|.|
T Consensus       147 tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t  220 (494)
T PHA02989        147 NLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSES  220 (494)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCcccc
Confidence            999998764  689999999999999998 6889999999998764    899999999999999988865543

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.81  E-value=4.4e-20  Score=187.66  Aligned_cols=135  Identities=19%  Similarity=0.065  Sum_probs=122.4

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH------HHHHHh-cC-CCCccCCCCCCcHH
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEE------KVLLNK-KL-PHLATATSKKWLPL  281 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai------~~lLl~-~g-advn~~d~~G~TpL  281 (345)
                      ..++.+|.||||.|+..|+.++++.|+..|++++.++ .++.||||.|++      ++.|++ .| ..+|..|..|.|||
T Consensus       267 ~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn-~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpL  345 (929)
T KOG0510|consen  267 NDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKN-KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPL  345 (929)
T ss_pred             hcccccCCchHHHHHHcCChhHHHHHHHcCCcccccC-CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCch
Confidence            3466789999999999999999999999999999999 999999999983      555555 44 45788899999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          282 HSLAASGEFYFVDALLKHNVDIN---AVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~~Gadin---~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+|+.+||..++++||+.|++..   ..|.+|.||||.|+..|+..+|++|+.+||++..+|..|.|
T Consensus       346 Hlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~S  412 (929)
T KOG0510|consen  346 HLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKS  412 (929)
T ss_pred             hhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccc
Confidence            99999999999999999999877   45999999999999999999999999999999999988865

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.81  E-value=8.6e-20  Score=194.70  Aligned_cols=135  Identities=21%  Similarity=0.236  Sum_probs=123.6

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHH
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHS  283 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~  283 (345)
                      +.....|.||||.|+..|+.+++..|++.++..+... ..|.+++|.++      +...++.+|++++.++..|+||||.
T Consensus       468 n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~-~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~  546 (1143)
T KOG4177|consen  468 NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDA-KKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHV  546 (1143)
T ss_pred             chhccccCcchhhhhccCCchHHHHhhhcCCccCccc-hhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHH
Confidence            3355678999999999999999999999888887777 88999999775      5688999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          284 LAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       284 Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||.+|+.++|++||++|++++++++.|+||||.||..|+.+|+++|+++||++|+.|.+|.|
T Consensus       547 A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~T  608 (1143)
T KOG4177|consen  547 AVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFT  608 (1143)
T ss_pred             HHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999987

>PHA02741 hypothetical protein; Provisional

Probab=99.81  E-value=2.5e-19  Score=156.67  Aligned_cols=124  Identities=14%  Similarity=0.033  Sum_probs=112.4

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHh------CCCCCCCCCCCCCCCcchHHH----------HHHHHHhcCCCCccCCC
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNS------GNYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLPHLATATS  275 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~------~gadin~~d~~~G~TpLh~Aa----------i~~lLl~~gadvn~~d~  275 (345)
                      .+..|.|+||.|+..|+.++++.|+.      .|++++.+| ..|.||||+|+          ++++|+.+|++++.++.
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d-~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATD-DAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccC-CCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            44579999999999999999998753      468899999 99999999886          35889999999999985


Q ss_pred             -CCCcHHHHHHHcCCHHHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          276 -KKWLPLHSLAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       276 -~G~TpLh~Aa~~g~~eiv~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                       .|+||||+|+..++.+++++|+. .|++++.+|..|+||||+|+..++.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             99999999999999999999997 59999999999999999999999999999999987654

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.81  E-value=1.7e-19  Score=154.97  Aligned_cols=125  Identities=14%  Similarity=0.041  Sum_probs=105.5

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCC--C-----CCCCCCCCCCCcchHHH---------HHHHHHhcCCCCccCC
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNY--D-----PPDKKSDGPRRKLFTKE---------EKVLLNKKLPHLATAT  274 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~ga--d-----in~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d  274 (345)
                      ..+..|.||||.|+..|+.  +.++...+.  +     ++.++ ..|.||||+|+         ++++|+.+|++++.++
T Consensus        12 ~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d-~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYN-RHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhc-CCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            3455799999999988873  344333322  2     33457 89999999875         3678999999999998


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          275 -SKKWLPLHSLAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       275 -~~G~TpLh~Aa~~g~~eiv~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                       ..|+||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..|+.+++++|+.+|+++++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~~  154 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCKV  154 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence             499999999999999999999997 4999999999999999999999999999999999998763

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.80  E-value=7.3e-20  Score=171.91  Aligned_cols=133  Identities=18%  Similarity=0.092  Sum_probs=120.0

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCC-CCCCCCCCCCCCCcchHHH-----------HHHHHHhcCCCCccC-CCCC
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGN-YDPPDKKSDGPRRKLFTKE-----------EKVLLNKKLPHLATA-TSKK  277 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~g-adin~~d~~~G~TpLh~Aa-----------i~~lLl~~gadvn~~-d~~G  277 (345)
                      -.+.+|.|+||+++.+.+++||+.|+..| ++++..+ ..|.||+|.++           ++..|...| |||++ ...|
T Consensus       263 laDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qN-rAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~g  340 (452)
T KOG0514|consen  263 LADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQN-RAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHG  340 (452)
T ss_pred             hhcCCCCeeeeeeecccchHHHHHHhccCcccccccc-cccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhc
Confidence            35568999999999999999999999887 6999999 99999999876           345555554 78877 5689


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Q 019158          278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE-SANPFVVDEVMWK  345 (345)
Q Consensus       278 ~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gad~n~~d~~G~T  345 (345)
                      .|+||+|+.+|+.++|+.||..|+|||.+|.+|.|+|+.||.+||.+|+++||.. ++|+...|.+|-|
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgST  409 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGST  409 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCch
Confidence            9999999999999999999999999999999999999999999999999999986 8999999999976

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.80  E-value=1.3e-19  Score=177.52  Aligned_cols=169  Identities=15%  Similarity=0.084  Sum_probs=140.9

Q ss_pred             cCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCC
Q 019158          148 QGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRG  227 (345)
Q Consensus       148 ~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~  227 (345)
                      .|.++... .-.++.|.+.|+++++. +++....+.                          ...+.+|.|++|-+|...
T Consensus        33 ~~~v~f~~-sa~~l~A~~~~d~~ev~-~ll~~ga~~--------------------------~~~n~DglTalhq~~id~   84 (527)
T KOG0505|consen   33 KPKVRFED-SAVFLEACSRGDLEEVR-KLLNRGASP--------------------------NLCNVDGLTALHQACIDD   84 (527)
T ss_pred             CCcccCCc-hHHHHhccccccHHHHH-HHhccCCCc--------------------------cccCCccchhHHHHHhcc
Confidence            46666654 34688899999999998 777665321                          235567889999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCC-------------------------------
Q 019158          228 LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHL-------------------------------  270 (345)
Q Consensus       228 ~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadv-------------------------------  270 (345)
                      +.+||++|+++|++||..| ..||||||.|+      ++.+|+++|+++                               
T Consensus        85 ~~e~v~~l~e~ga~Vn~~d-~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~g  163 (527)
T KOG0505|consen   85 NLEMVKFLVENGANVNAQD-NEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQG  163 (527)
T ss_pred             cHHHHHHHHHhcCCccccc-cccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhc
Confidence            9999999999999999999 99999999553      455555555543                               


Q ss_pred             ----------------------------ccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC
Q 019158          271 ----------------------------ATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK  322 (345)
Q Consensus       271 ----------------------------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~  322 (345)
                                                  +..+..|.|.||.|+..|..+++++|+.+|.+++.+|.+||||||.|+.+|.
T Consensus       164 i~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~  243 (527)
T KOG0505|consen  164 IDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQ  243 (527)
T ss_pred             ccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhh
Confidence                                        3344448999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCC
Q 019158          323 QAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       323 ~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|+++|++++..+..|.|
T Consensus       244 ~~~~elL~~~ga~~d~~t~~g~~  266 (527)
T KOG0505|consen  244 EDACELLVEHGADMDAKTKMGET  266 (527)
T ss_pred             HhHHHHHHHhhcccchhhhcCCC
Confidence            99999999999999999998876

>PHA02795 ankyrin-like protein; Provisional

Probab=99.80  E-value=5.1e-19  Score=174.50  Aligned_cols=128  Identities=13%  Similarity=-0.004  Sum_probs=116.4

Q ss_pred             CCCcHHHHHHh--CCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccC------CCCCCcH
Q 019158          215 PPKNPKWAVYG--RGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATA------TSKKWLP  280 (345)
Q Consensus       215 ~g~tpL~aA~~--~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~------d~~G~Tp  280 (345)
                      .++|+||.++.  .++.+++++|+++|++++..+   +.||+|+|+      ++++|+++|++....      +..+.|+
T Consensus       115 ~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~---~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~  191 (437)
T PHA02795        115 SVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE---CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTR  191 (437)
T ss_pred             cccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC---CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccch
Confidence            48899999988  899999999999999999855   489999986      689999999854322      2347899


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +|.|+..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++||+++.+|..|+|
T Consensus       192 l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~T  256 (437)
T PHA02795        192 GFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYT  256 (437)
T ss_pred             hHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999987

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.80  E-value=1.9e-19  Score=173.82  Aligned_cols=145  Identities=21%  Similarity=0.205  Sum_probs=129.4

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .+..|+..|+++.+| .|+.... .+                         +....+..|||.+||..|+.+++++|+++
T Consensus        87 pLWaAsaAGHl~vVk-~L~~~ga-~V-------------------------N~tT~TNStPLraACfDG~leivKyLvE~  139 (615)
T KOG0508|consen   87 PLWAASAAGHLEVVK-LLLRRGA-SV-------------------------NDTTRTNSTPLRAACFDGHLEIVKYLVEH  139 (615)
T ss_pred             hhhHHhccCcHHHHH-HHHHhcC-cc-------------------------ccccccCCccHHHHHhcchhHHHHHHHHc
Confidence            357788899999998 7776552 22                         22334566899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |+|+++.+ ..|.|.||+||      ++++|++.|+|+|.++..|.|+||.|+..|+++++++|+.+|+.+. +|..|.|
T Consensus       140 gad~~Ian-rhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~Gmt  217 (615)
T KOG0508|consen  140 GADPEIAN-RHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMT  217 (615)
T ss_pred             CCCCcccc-cCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCc
Confidence            99999999 99999999887      7899999999999999999999999999999999999999999886 5777999


Q ss_pred             HHHHHHHcCCHHHHHHHHHC
Q 019158          313 ALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~  332 (345)
                      ||..|+..|+.++|++|++.
T Consensus       218 PL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  218 PLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             hHHHHhhhcchHHHHHHhcC
Confidence            99999999999999999964

>PHA02798 ankyrin-like protein; Provisional

Probab=99.80  E-value=7.5e-19  Score=177.93  Aligned_cols=133  Identities=13%  Similarity=0.100  Sum_probs=117.0

Q ss_pred             CCCCCCcHHHHHHhC-----CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH---------HHHHHHhcCCCCccCCCCC
Q 019158          212 QRVPPKNPKWAVYGR-----GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE---------EKVLLNKKLPHLATATSKK  277 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~-----~~~evvklLl~~gadin~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d~~G  277 (345)
                      .+..|.||||.++.+     +..+++++|+++|+++|.++ ..|+||||+|+         ++++|+++|++++.+|..|
T Consensus        67 ~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d-~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g  145 (489)
T PHA02798         67 LDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKN-SDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDG  145 (489)
T ss_pred             CCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCC-CCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCC
Confidence            445689999888753     66899999999999999999 99999999885         5789999999999999999


Q ss_pred             CcHHHHHHHcCC---HHHHHHHHhCCCCCcccC-CCCCCHHHHHHHc----CCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          278 WLPLHSLAASGE---FYFVDALLKHNVDINAVD-KDGLTALHKAIIG----KKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       278 ~TpLh~Aa~~g~---~eiv~~LL~~Gadin~~d-~~G~TpLh~Aa~~----g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +||||+|+..|+   .+++++|+++|++++.++ ..|.||||.++..    ++.+++++|+++|++++..+..|.|
T Consensus       146 ~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~  221 (489)
T PHA02798        146 FTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKK  221 (489)
T ss_pred             CcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccc
Confidence            999999999998   999999999999999885 5789999998764    4799999999999988887766543

>PHA02917 ankyrin-like protein; Provisional

Probab=99.79  E-value=1.3e-18  Score=181.55  Aligned_cols=133  Identities=15%  Similarity=0.084  Sum_probs=114.2

Q ss_pred             CCCCCCcHHHHHHhC---CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------------------------------
Q 019158          212 QRVPPKNPKWAVYGR---GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------------------------------  258 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~---~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------------------------------  258 (345)
                      .+..|+||||.|+..   |+.+++++|+++|++++.++ ..|+||||+|+                              
T Consensus        28 ~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~-~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~  106 (661)
T PHA02917         28 RNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKN-WRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIF  106 (661)
T ss_pred             cCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccC-CCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchH
Confidence            355789999987554   78999999999999999999 99999999553                              


Q ss_pred             -----------HHHHHHhcCCCCccCCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCcccCC---CC-----------C
Q 019158          259 -----------EKVLLNKKLPHLATATSKKWLPLHSLA--ASGEFYFVDALLKHNVDINAVDK---DG-----------L  311 (345)
Q Consensus       259 -----------i~~lLl~~gadvn~~d~~G~TpLh~Aa--~~g~~eiv~~LL~~Gadin~~d~---~G-----------~  311 (345)
                                 ++++|+++|+++|.+|..|+||||+|+  ..|+.+++++|+++|+++|..|.   .|           .
T Consensus       107 ~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~  186 (661)
T PHA02917        107 SYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCG  186 (661)
T ss_pred             HHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccc
Confidence                       247788899999999999999999654  57899999999999999987653   34           5


Q ss_pred             CHHHHHHH-----------cCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          312 TALHKAII-----------GKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       312 TpLh~Aa~-----------~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+.           +++.+++++|+++|||++.+|.+|+|
T Consensus       187 t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~T  231 (661)
T PHA02917        187 TVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCT  231 (661)
T ss_pred             cHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCc
Confidence            99999986           46899999999999999999999987

>PHA02795 ankyrin-like protein; Provisional

Probab=99.78  E-value=2.2e-18  Score=170.01  Aligned_cols=126  Identities=19%  Similarity=0.109  Sum_probs=111.1

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCC-CCC----CCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHH
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPP-DKK----SDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSL  284 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin-~~d----~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~A  284 (345)
                      +.||+|.|+..++.+++++|+++|++.+ ..+    ...|.|++|.|+      ++++|+++|+++|.+|..|+||||+|
T Consensus       149 ~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~A  228 (437)
T PHA02795        149 CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRA  228 (437)
T ss_pred             CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHH
Confidence            4789999999999999999999998532 221    024678888664      78999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC--------HHHHHHHHHCCCCCCCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK--------QAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~--------~eiv~~LL~~Gad~n~~d~  341 (345)
                      +..|+.+++++|+++|++++.+|..|+||||+|+..|+        .+++++|+++|++++....
T Consensus       229 a~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~  293 (437)
T PHA02795        229 IYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL  293 (437)
T ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH
Confidence            99999999999999999999999999999999999984        6999999999999886554

>PHA02917 ankyrin-like protein; Provisional

Probab=99.77  E-value=3.7e-18  Score=178.16  Aligned_cols=119  Identities=15%  Similarity=0.058  Sum_probs=105.5

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHH--------HHHHHHHhcCCCCccCCC---CC---------
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTK--------EEKVLLNKKLPHLATATS---KK---------  277 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~A--------ai~~lLl~~gadvn~~d~---~G---------  277 (345)
                      ++++.|+.+++.+++++|+++|+++|.+| ..|+||||++        +++++|+++|++++..|.   .|         
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d-~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~  183 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKC-ENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR  183 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcCCCCCccC-CCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence            56788888899999999999999999999 9999999954        278999999999987653   34         


Q ss_pred             --CcHHHHHHH-----------cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC
Q 019158          278 --WLPLHSLAA-----------SGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQ--AVTNYLLRESANPFV  338 (345)
Q Consensus       278 --~TpLh~Aa~-----------~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~--eiv~~LL~~Gad~n~  338 (345)
                        .||||+|+.           +++.+++++|+++|+++|.+|.+|.||||+|+..|+.  +++++|++ |++++.
T Consensus       184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~  258 (661)
T PHA02917        184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTA  258 (661)
T ss_pred             ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccc
Confidence              599999986           5689999999999999999999999999999999985  79999985 887753

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.77  E-value=4.3e-18  Score=161.48  Aligned_cols=113  Identities=17%  Similarity=0.115  Sum_probs=101.6

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCC---CCCCCCcchHHH------HHHHHHhcCCCCccC-CCCCCcHHHHHHHc
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKK---SDGPRRKLFTKE------EKVLLNKKLPHLATA-TSKKWLPLHSLAAS  287 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d---~~~G~TpLh~Aa------i~~lLl~~gadvn~~-d~~G~TpLh~Aa~~  287 (345)
                      ++||+|+..++.+++++|+++|++++.++   ...|.||||+|+      ++++|+++|++++.+ +..|.||||+|+..
T Consensus        35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~  114 (300)
T PHA02884         35 NILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH  114 (300)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence            46899999999999999999999999874   158999999996      689999999999986 46899999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      |+.+++++|+.+|++++.+|..|.||||+|+..++.+++.++.
T Consensus       115 ~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~  157 (300)
T PHA02884        115 GCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC  157 (300)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence            9999999999999999999999999999999987766665544

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.77  E-value=3.1e-18  Score=174.29  Aligned_cols=180  Identities=17%  Similarity=0.126  Sum_probs=145.0

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCC
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRV  214 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~  214 (345)
                      .++.++.. +...+|..|+|.       |++.|..+.+. -++..++..-         ...+            +-.+.
T Consensus       173 Li~~~a~~~K~~~~~~~~iH~-------aa~s~s~e~mE-i~l~~~g~~r---------~~~i------------n~~~n  223 (929)
T KOG0510|consen  173 LINKGADPCKSDIDGNFPIHE-------AARSGSKECME-IFLPEHGYER---------QTHI------------NFDNN  223 (929)
T ss_pred             HHhcCCCCCcccCcCCchHHH-------HHHhcchhhhh-hhhccccchh---------hccc------------ccccC
Confidence            34567766 666777777644       77888877775 3343232100         1111            22455


Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCC---------------CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYD---------------PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATA  273 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gad---------------in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~  273 (345)
                      .+.||||.|+.+|+.++++.+++.|..               +|..| ..|.||||+|+      ++..|+..|++++.+
T Consensus       224 ~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d-~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k  302 (929)
T KOG0510|consen  224 EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDED-NDGCTPLHYAARQGGPESVDNLLGFGASINSK  302 (929)
T ss_pred             CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhccc-ccCCchHHHHHHcCChhHHHHHHHcCCccccc
Confidence            689999999999999999999988753               34456 89999999997      689999999999999


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHh-CC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCC
Q 019158          274 TSKKWLPLHSLAASGEFYFVDALLK-HN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF---VVDEVMWK  345 (345)
Q Consensus       274 d~~G~TpLh~Aa~~g~~eiv~~LL~-~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n---~~d~~G~T  345 (345)
                      +.++.||||.||.+|++++|+.||+ .| ..+|..|..|.||||+|+..||..++++||+.||...   ..|.+|.|
T Consensus       303 n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~T  379 (929)
T KOG0510|consen  303 NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNT  379 (929)
T ss_pred             CCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCch
Confidence            9999999999999999999999998 65 6788999999999999999999999999999999876   44778876

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.76  E-value=2.3e-18  Score=183.86  Aligned_cols=171  Identities=20%  Similarity=0.194  Sum_probs=142.7

Q ss_pred             cCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCC
Q 019158          139 FGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPK  217 (345)
Q Consensus       139 ~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~  217 (345)
                      ++... ...++|++|++.       |+..|+.+.++ .++.... ..                         ...+..+-
T Consensus       463 ~g~~~n~~s~~G~T~Lhl-------aaq~Gh~~~~~-llle~~~-~~-------------------------~~~~~~~l  508 (1143)
T KOG4177|consen  463 YGADPNAVSKQGFTPLHL-------AAQEGHTEVVQ-LLLEGGA-ND-------------------------NLDAKKGL  508 (1143)
T ss_pred             cCCCcchhccccCcchhh-------hhccCCchHHH-HhhhcCC-cc-------------------------Cccchhcc
Confidence            44444 555677777755       55677766665 3332221 11                         22445688


Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHH
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFY  291 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~e  291 (345)
                      +++|.+...+...+++.++++|++++.++ ..|.||||.|+      ++++|+++|++++.+++.|+||||.||..|+.+
T Consensus       509 ~~lhla~~~~~v~~~~~l~~~ga~v~~~~-~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~  587 (1143)
T KOG4177|consen  509 TPLHLAADEDTVKVAKILLEHGANVDLRT-GRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHND  587 (1143)
T ss_pred             chhhhhhhhhhHHHHHHHhhcCCceehhc-ccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHH
Confidence            89999999999999999999999999999 99999999998      789999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCC
Q 019158          292 FVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN-----PFVVDEVMW  344 (345)
Q Consensus       292 iv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-----~n~~d~~G~  344 (345)
                      |+.+|+++|+++|+.|.+|.||||+|+..|+.+++++|+..|++     ....+..|.
T Consensus       588 i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~  645 (1143)
T KOG4177|consen  588 IAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGA  645 (1143)
T ss_pred             HHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhccc
Confidence            99999999999999999999999999999999999999999988     444444443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.75  E-value=1.2e-17  Score=179.08  Aligned_cols=127  Identities=13%  Similarity=0.016  Sum_probs=118.1

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      +.++++.|+..|+.++++.|++.|+++|..| ..|+||||+|+      ++++|+++|+++|.+|..|+||||+|+..|+
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~  603 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIGD-SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH  603 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence            5567888888899999999999999999999 99999999997      6799999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|++.++..+  ...|.++||+|+..|+.+++++|+++|+|++.+|.+|+|
T Consensus       604 ~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~T  657 (823)
T PLN03192        604 HKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGAT  657 (823)
T ss_pred             HHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            999999999887655  346779999999999999999999999999999999987

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.73  E-value=1.8e-17  Score=141.99  Aligned_cols=125  Identities=22%  Similarity=0.273  Sum_probs=105.4

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHH
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFV  293 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv  293 (345)
                      ||+|..+...+|.++|-+..-.+|.+| ..|.||||.|+      |+..|+..|++.+.+...||||||.||..++.+|+
T Consensus        68 lwaae~nrl~eV~~lL~e~an~vNtrD-~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va  146 (228)
T KOG0512|consen   68 LWAAEKNRLTEVQRLLSEKANHVNTRD-EDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVA  146 (228)
T ss_pred             HHHHhhccHHHHHHHHHhccccccccc-cccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHH
Confidence            677776555555444444555699999 99999999987      78999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          294 DALLKHNVDINAVDKDGLTALHKAIIGKK-QAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       294 ~~LL~~Gadin~~d~~G~TpLh~Aa~~g~-~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      -+||++|+|||++....+||||+||...+ ...+++|+. .++++..+++.+.|
T Consensus       147 ~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eet  200 (228)
T KOG0512|consen  147 GRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEET  200 (228)
T ss_pred             HHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccch
Confidence            99999999999999999999999997655 456666664 47888888877764

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.73  E-value=2.4e-17  Score=174.96  Aligned_cols=159  Identities=12%  Similarity=0.055  Sum_probs=128.1

Q ss_pred             CHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHH-HHHhCCcHHHHHHH
Q 019158          157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKW-AVYGRGLDDVSEFF  235 (345)
Q Consensus       157 ~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~-aA~~~~~~evvklL  235 (345)
                      ...+..|++.|+++.++ +++...+ ...               .        +..+..|+|||| +|+.+++.+++++|
T Consensus        18 ~~~~l~A~~~g~~~~v~-~lL~~~~-~~~---------------i--------n~~d~~G~t~Lh~~A~~~~~~eiv~lL   72 (743)
T TIGR00870        18 EKAFLPAAERGDLASVY-RDLEEPK-KLN---------------I--------NCPDRLGRSALFVAAIENENLELTELL   72 (743)
T ss_pred             HHHHHHHHHcCCHHHHH-HHhcccc-ccC---------------C--------CCcCccchhHHHHHHHhcChHHHHHHH
Confidence            44578899999999998 7776533 111               0        224457999999 99999999999999


Q ss_pred             HhCCCCCCCCCCCCCCCcchHHHH---------HHHHHhcCCC------Cc----cCCCCCCcHHHHHHHcCCHHHHHHH
Q 019158          236 NSGNYDPPDKKSDGPRRKLFTKEE---------KVLLNKKLPH------LA----TATSKKWLPLHSLAASGEFYFVDAL  296 (345)
Q Consensus       236 l~~gadin~~d~~~G~TpLh~Aai---------~~lLl~~gad------vn----~~d~~G~TpLh~Aa~~g~~eiv~~L  296 (345)
                      +++|+    .+ ..|.||||.|+.         +.++...+.+      ++    .....|.||||+||.+|+.+++++|
T Consensus        73 l~~g~----~~-~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklL  147 (743)
T TIGR00870        73 LNLSC----RG-AVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLL  147 (743)
T ss_pred             HhCCC----CC-CcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHH
Confidence            99987    56 789999998862         2344444322      11    1235699999999999999999999


Q ss_pred             HhCCCCCcccC--------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          297 LKHNVDINAVD--------------KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       297 L~~Gadin~~d--------------~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++|++++.++              ..|.||||+|+..|+.+++++|+++|+|++.+|..|+|
T Consensus       148 L~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T  210 (743)
T TIGR00870       148 LERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNT  210 (743)
T ss_pred             HhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhH
Confidence            99999998753              35899999999999999999999999999999999986

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.72  E-value=1.2e-17  Score=147.92  Aligned_cols=130  Identities=18%  Similarity=0.087  Sum_probs=114.7

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAA  286 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~  286 (345)
                      ...+++|+..++...+.+++..+.+  ..+|..| ..|.|||.||+      ++++|+..|++++...++..++|++|+.
T Consensus       126 s~~p~s~~slsVhql~L~~~~~~~~--n~VN~~D-e~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~  202 (296)
T KOG0502|consen  126 SLMPWSPLSLSVHQLHLDVVDLLVN--NKVNACD-EFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATR  202 (296)
T ss_pred             ccccCChhhHHHHHHHHHHHHHHhh--ccccCcc-ccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhc
Confidence            3457888888877777777655544  4678899 99999999986      6899999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          287 SGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       287 ~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .|..++|++||.++.|+|..|.+|.|||-||++.+|.+|++.||..||+++..+..|.+
T Consensus       203 ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~  261 (296)
T KOG0502|consen  203 GGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYW  261 (296)
T ss_pred             CChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCc
Confidence            99999999999999999999999999999999999999999999999999999988864

>PHA02730 ankyrin-like protein; Provisional

Probab=99.72  E-value=5.6e-17  Score=167.14  Aligned_cols=124  Identities=15%  Similarity=0.110  Sum_probs=108.1

Q ss_pred             CCCCCcHHHHHHhCCc----HHHHHHHHhCCC--CCCCCCCCCCCCcchH---HH---------------HHHHHHhcCC
Q 019158          213 RVPPKNPKWAVYGRGL----DDVSEFFNSGNY--DPPDKKSDGPRRKLFT---KE---------------EKVLLNKKLP  268 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~----~evvklLl~~ga--din~~d~~~G~TpLh~---Aa---------------i~~lLl~~ga  268 (345)
                      ...|.||||.|+..+.    .+++++|+++|+  +++.++ ..|.||||.   +.               ++++|+.+|+
T Consensus       375 k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd-~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GA  453 (672)
T PHA02730        375 TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVS-NNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMD  453 (672)
T ss_pred             CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccc-cCCCchHhHHHHHHhccccccccchhHHHHHHHHHhccc
Confidence            3679999997666553    899999999987  688898 899999983   21               3689999999


Q ss_pred             CCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCHHHHHHHc--CCHHHHHHHHHCCCCCC
Q 019158          269 HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDK-DGLTALHKAIIG--KKQAVTNYLLRESANPF  337 (345)
Q Consensus       269 dvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~-~G~TpLh~Aa~~--g~~eiv~~LL~~Gad~n  337 (345)
                      ++|.+|..|+||||+|+..++.+++++|+++|+++|.+|. .|.||||+|+..  ++.+++++|+++|+++.
T Consensus       454 DINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~  525 (672)
T PHA02730        454 DIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE  525 (672)
T ss_pred             chhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence            9999999999999999999999999999999999999997 599999999874  78999999999998763

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.69  E-value=2.1e-17  Score=146.29  Aligned_cols=129  Identities=16%  Similarity=0.090  Sum_probs=117.7

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..|.|||.-|+..|++.++++|++.|++++... ....++|..|+      ++++|+.+++|+|..|.+|-|||-||+
T Consensus       156 ~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lg-k~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAv  234 (296)
T KOG0502|consen  156 CDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALG-KYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAV  234 (296)
T ss_pred             ccccCchHhHHHHhcCchHHHHHHHHcCCChhhhh-hhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeee
Confidence            34468999977777799999999999999999999 89999999886      899999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEV  342 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~  342 (345)
                      +.|+.+||+.||+.|++++..+..|++++..|+..|+. +|+..++.-+..+.+|+.
T Consensus       235 rgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~  290 (296)
T KOG0502|consen  235 RGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSE  290 (296)
T ss_pred             cCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhccc
Confidence            99999999999999999999999999999999999998 888888877766666643

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.69  E-value=1.5e-16  Score=123.66  Aligned_cols=89  Identities=27%  Similarity=0.298  Sum_probs=74.9

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH  299 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  299 (345)
                      ||.|+..++.+++++|++.+.+++                            .    |.||||+|+..|+.+++++|+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~----------------------------~----~~~~l~~A~~~~~~~~~~~Ll~~   48 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADIN----------------------------L----GNTALHYAAENGNLEIVKLLLEN   48 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTT----------------------------S----SSBHHHHHHHTTTHHHHHHHHHT
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCC----------------------------C----CCCHHHHHHHcCCHHHHHHHHHh
Confidence            466666677777777777654442                            2    66799999999999999999999


Q ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 019158          300 NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD  340 (345)
Q Consensus       300 Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d  340 (345)
                      |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus        49 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   49 GADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             TTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred             cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            99999999999999999999999999999999999999886

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02730 ankyrin-like protein; Provisional

Probab=99.68  E-value=2.1e-16  Score=162.95  Aligned_cols=117  Identities=12%  Similarity=-0.003  Sum_probs=102.8

Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH----------HHHHHHhcCC--CCccCCCCCCcHHHH---HHHcC---
Q 019158          227 GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLP--HLATATSKKWLPLHS---LAASG---  288 (345)
Q Consensus       227 ~~~evvklLl~~gadin~~d~~~G~TpLh~Aa----------i~~lLl~~ga--dvn~~d~~G~TpLh~---Aa~~g---  288 (345)
                      -+.+++++|+++|+++|. + ..|.||||+|+          ++++|+++|+  +++.+|..|.||||.   |...+   
T Consensus       357 v~ieIvelLIs~GAdIN~-k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~  434 (672)
T PHA02730        357 VSIPILRCMLDNGATMDK-T-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGY  434 (672)
T ss_pred             CcHHHHHHHHHCCCCCCc-C-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccc
Confidence            468999999999999997 4 68999999763          6789999998  699999999999994   33232   


Q ss_pred             ------CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCC
Q 019158          289 ------EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE-VMWK  345 (345)
Q Consensus       289 ------~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~-~G~T  345 (345)
                            ..+++++|+.+|+++|.+|..|.||||+|+..++.+++++|+++||+++.+|. .|+|
T Consensus       435 ~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~T  498 (672)
T PHA02730        435 HCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINT  498 (672)
T ss_pred             cccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcC
Confidence                  23579999999999999999999999999999999999999999999999997 4765

>PHA02741 hypothetical protein; Provisional

Probab=99.68  E-value=2.1e-16  Score=138.13  Aligned_cols=102  Identities=18%  Similarity=0.173  Sum_probs=91.5

Q ss_pred             CCCCCCCCCCcchHHH------HHHHHH------hcCCCCccCCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCccc
Q 019158          243 PDKKSDGPRRKLFTKE------EKVLLN------KKLPHLATATSKKWLPLHSLAASGE----FYFVDALLKHNVDINAV  306 (345)
Q Consensus       243 n~~d~~~G~TpLh~Aa------i~~lLl------~~gadvn~~d~~G~TpLh~Aa~~g~----~eiv~~LL~~Gadin~~  306 (345)
                      +.++ ..|.|+||+|+      ++++|+      ..|++++.+|..|+||||+|+..|+    .+++++|+.+|+++|.+
T Consensus        15 ~~~~-~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~   93 (169)
T PHA02741         15 AEKN-SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ   93 (169)
T ss_pred             hccc-cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence            4567 88999999997      456653      3478999999999999999999999    58999999999999999


Q ss_pred             CC-CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          307 DK-DGLTALHKAIIGKKQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       307 d~-~G~TpLh~Aa~~g~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      +. .|+||||+|+..++.+++++|+. .|++++.+|..|+|
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~t  134 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKS  134 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCC
Confidence            85 99999999999999999999998 59999999999987

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.68  E-value=1.1e-16  Score=139.60  Aligned_cols=107  Identities=17%  Similarity=0.107  Sum_probs=95.4

Q ss_pred             CCCCCCCCCCCCCCCcchHHH----------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHH---HHHHHhCCCCCc
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYF---VDALLKHNVDIN  304 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa----------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~ei---v~~LL~~Gadin  304 (345)
                      +|++++..+ ..+.+++|+|+          ++++|...|++++.+|..|+||||+|+..|+.++   +++|+++|+++|
T Consensus         9 ~~~~~~~~~-~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin   87 (166)
T PHA02743          9 NNLGAVEID-EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN   87 (166)
T ss_pred             cchHHhhhc-cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence            567788788 78889999876          3356788999999999999999999999988654   899999999999


Q ss_pred             ccC-CCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          305 AVD-KDGLTALHKAIIGKKQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       305 ~~d-~~G~TpLh~Aa~~g~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      .+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+|
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~t  130 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHET  130 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCC
Confidence            998 589999999999999999999995 79999999999987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.68  E-value=2.6e-17  Score=150.83  Aligned_cols=105  Identities=18%  Similarity=0.129  Sum_probs=66.7

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAA  286 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~  286 (345)
                      +..|.+|||-|+..|+..+++.|+..|+.+|..+ ....||||.|+      ++..|++..+|+|+.+..|.|||||||.
T Consensus        31 ddhgfsplhwaakegh~aivemll~rgarvn~tn-mgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacf  109 (448)
T KOG0195|consen   31 DDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTN-MGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACF  109 (448)
T ss_pred             cccCcchhhhhhhcccHHHHHHHHhccccccccc-CCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhh
Confidence            3345666666666666666666666666666666 55566666654      4566666666666666666666666666


Q ss_pred             cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 019158          287 SGEFYFVDALLKHNVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       287 ~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa  318 (345)
                      .|.-.+++-|+..|+-++..++.|.|||..|-
T Consensus       110 wgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  110 WGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             hcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            66666666666666666666666666666553

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.67  E-value=5.1e-16  Score=147.34  Aligned_cols=103  Identities=14%  Similarity=0.014  Sum_probs=93.0

Q ss_pred             CCCCCCCCCCCcchHHH-------HHHHHHhcCCCCccCC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc-CCC
Q 019158          242 PPDKKSDGPRRKLFTKE-------EKVLLNKKLPHLATAT----SKKWLPLHSLAASGEFYFVDALLKHNVDINAV-DKD  309 (345)
Q Consensus       242 in~~d~~~G~TpLh~Aa-------i~~lLl~~gadvn~~d----~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~-d~~  309 (345)
                      +..+| ..|+|++++++       ++++|+++|++++.++    ..|.||||+|+..|+.+++++|+++|+++|.+ +..
T Consensus        25 ~~~~d-~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~  103 (300)
T PHA02884         25 IKKKN-KICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEA  103 (300)
T ss_pred             hhccC-cCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCC
Confidence            34567 78888776654       6899999999999974    68999999999999999999999999999986 468


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          310 GLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       310 G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |.||||+|+..|+.+++++|+.+|++++.+|..|+|
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~T  139 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVT  139 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999987

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.66  E-value=6.1e-16  Score=132.62  Aligned_cols=135  Identities=16%  Similarity=0.074  Sum_probs=118.0

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ...|+.++.+.+++ +|+...+..+.                         ....+|.||||-|+.+|+.+|++.|+..|
T Consensus        67 ~lwaae~nrl~eV~-~lL~e~an~vN-------------------------trD~D~YTpLHRAaYn~h~div~~ll~~g  120 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQ-RLLSEKANHVN-------------------------TRDEDEYTPLHRAAYNGHLDIVHELLLSG  120 (228)
T ss_pred             HHHHHhhccHHHHH-HHHHhcccccc-------------------------ccccccccHHHHHHhcCchHHHHHHHHcc
Confidence            56788899999999 99988887664                         24457999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHH-HHHHHH-hCCCCCcccCCCCC
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFY-FVDALL-KHNVDINAVDKDGL  311 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~e-iv~~LL-~~Gadin~~d~~G~  311 (345)
                      ++++++. ..||||||.||      ++.+|+++|+|||+.....+||||+||...+.. .+.+|+ ..++....++..+.
T Consensus       121 An~~a~T-~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~ee  199 (228)
T KOG0512|consen  121 ANKEAKT-NEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEE  199 (228)
T ss_pred             CCccccc-ccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccc
Confidence            9999999 99999999887      789999999999999999999999999887654 556665 44688888899999


Q ss_pred             CHHHHHHHcC
Q 019158          312 TALHKAIIGK  321 (345)
Q Consensus       312 TpLh~Aa~~g  321 (345)
                      ||+.+|-+.+
T Consensus       200 ta~~iARRT~  209 (228)
T KOG0512|consen  200 TAFDIARRTS  209 (228)
T ss_pred             hHHHHHHHhh
Confidence            9999998765

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.63  E-value=8.4e-15  Score=118.05  Aligned_cols=116  Identities=29%  Similarity=0.317  Sum_probs=109.5

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      ..|.||++.|+..++.+++++|++.|.+.+..+ ..|.+++|+|+      ++++|+..|++++..+..|.||+|+|+..
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~-~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADVNAKD-NDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            468999999999999999999999999988899 89999999886      67899999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      ++.+++++|+.+|.+++..+..|.||+++|...++.+++++|+
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999999999999999999999999999999885

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02792 ankyrin-like protein; Provisional

Probab=99.63  E-value=1.8e-15  Score=154.70  Aligned_cols=122  Identities=16%  Similarity=0.099  Sum_probs=105.2

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCC--CCcchHHH---------HHHHHHhcCCCCccCCCCCCcHHHH
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGP--RRKLFTKE---------EKVLLNKKLPHLATATSKKWLPLHS  283 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G--~TpLh~Aa---------i~~lLl~~gadvn~~d~~G~TpLh~  283 (345)
                      .+.+.++.|+..+..+++++|+++|++++.++ ..|  .||||+|+         ++++|+++|+++|.+|..|+||||+
T Consensus       338 ~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD-~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~  416 (631)
T PHA02792        338 KHINKYFQKFDNRDPKVVEYILKNGNVVVEDD-DNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYY  416 (631)
T ss_pred             CcchHHHHHHHcCCHHHHHHHHHcCCchhhhc-CCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHH
Confidence            35566777888899999999999999999988 664  68898753         3678899999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHH--cC--------CHHHHHHHHHCCCCCC
Q 019158          284 LAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII--GK--------KQAVTNYLLRESANPF  337 (345)
Q Consensus       284 Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~--~g--------~~eiv~~LL~~Gad~n  337 (345)
                      |+..++.+++++|+++|++++.+|..|.||||+|+.  .+        ..+++++|+++|.++.
T Consensus       417 Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        417 CIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            999999999999999999999999999999999975  22        2567899999987764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.7e-15  Score=139.08  Aligned_cols=124  Identities=20%  Similarity=0.131  Sum_probs=110.8

Q ss_pred             HHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHH
Q 019158          221 WAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVD  294 (345)
Q Consensus       221 ~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~  294 (345)
                      +-+..++...+--+|-+..-|.|.-| ..|.+|||+||      +++.|+++|+.+|..+....||||+|+.+||.++|+
T Consensus         6 ~wcregna~qvrlwld~tehdln~gd-dhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivq   84 (448)
T KOG0195|consen    6 GWCREGNAFQVRLWLDDTEHDLNVGD-DHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQ   84 (448)
T ss_pred             hhhhcCCeEEEEEEecCccccccccc-ccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHH
Confidence            34444444444445556677888888 99999999986      789999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          295 ALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       295 ~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .|+++.+|+|+.+..|+|||||||..|.-.+++-|+.+||-+++.|+.|.|
T Consensus        85 kll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~t  135 (448)
T KOG0195|consen   85 KLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMT  135 (448)
T ss_pred             HHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCC
Confidence            999999999999999999999999999999999999999999999999986

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.61  E-value=9.6e-16  Score=131.54  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=86.6

Q ss_pred             CCCCCCCCCCCcchHHHH----HHHHHhcCCC-------CccCCCCCCcHHHHHHHcCCH---HHHHHHHhCCCCCcccC
Q 019158          242 PPDKKSDGPRRKLFTKEE----KVLLNKKLPH-------LATATSKKWLPLHSLAASGEF---YFVDALLKHNVDINAVD  307 (345)
Q Consensus       242 in~~d~~~G~TpLh~Aai----~~lLl~~gad-------vn~~d~~G~TpLh~Aa~~g~~---eiv~~LL~~Gadin~~d  307 (345)
                      ++..| ..|.||||+|+.    +.++...+..       ++.+|..|+||||+|+..|+.   +++++|+++|++++.++
T Consensus        10 ~~~~d-~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         10 ASEPD-IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HHhcC-CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            34467 889999999983    4454443332       345688999999999999987   46899999999999998


Q ss_pred             -CCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Q 019158          308 -KDGLTALHKAIIGKKQAVTNYLLRE-SANPFVVDEVMWK  345 (345)
Q Consensus       308 -~~G~TpLh~Aa~~g~~eiv~~LL~~-Gad~n~~d~~G~T  345 (345)
                       ..|+||||+|+..|+.+++++|+.+ |++++.+|..|+|
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~t  128 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKT  128 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCC
Confidence             4999999999999999999999984 9999999999987

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.60  E-value=5.5e-15  Score=156.96  Aligned_cols=196  Identities=15%  Similarity=0.075  Sum_probs=135.6

Q ss_pred             CCCchhHHHHHHHHhhCHHHHHHHHHHHhc--Cchhh-hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCC
Q 019158          110 NLVPDKWKQVQEELNLTKKEKRQIALQIEF--GSRVE-KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPT  186 (345)
Q Consensus       110 ~~~p~~~~~~~~e~~~~kke~~~i~~~le~--~~~~e-~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~  186 (345)
                      +-..+.|+.....+..+.-+..+  +.++.  +...+ .+..|.+|++      +.|+ .++..++. +++..+..    
T Consensus        12 ~~~~~~~~~~l~A~~~g~~~~v~--~lL~~~~~~~in~~d~~G~t~Lh------~~A~-~~~~~eiv-~lLl~~g~----   77 (743)
T TIGR00870        12 SPLSDEEKAFLPAAERGDLASVY--RDLEEPKKLNINCPDRLGRSALF------VAAI-ENENLELT-ELLLNLSC----   77 (743)
T ss_pred             CCCCHHHHHHHHHHHcCCHHHHH--HHhccccccCCCCcCccchhHHH------HHHH-hcChHHHH-HHHHhCCC----
Confidence            34567888888888777655432  22333  23332 3456777762      2344 55554444 56655442    


Q ss_pred             CccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCC---cHHHHHHHHhCCCC------CCC----CCCCCCCCc
Q 019158          187 DAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRG---LDDVSEFFNSGNYD------PPD----KKSDGPRRK  253 (345)
Q Consensus       187 ~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~---~~evvklLl~~gad------in~----~d~~~G~Tp  253 (345)
                                               ....|.||||+|+.++   ...++..+...+.+      ++.    .. ..|.||
T Consensus        78 -------------------------~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~-~~G~Tp  131 (743)
T TIGR00870        78 -------------------------RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEF-TPGITA  131 (743)
T ss_pred             -------------------------CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhcccccccc-CCCCcH
Confidence                                     1225889999999732   22333444444322      111    12 469999


Q ss_pred             chHHH------HHHHHHhcCCCCccCC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCH
Q 019158          254 LFTKE------EKVLLNKKLPHLATAT--------------SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA  313 (345)
Q Consensus       254 Lh~Aa------i~~lLl~~gadvn~~d--------------~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~Tp  313 (345)
                      ||+|+      ++++|+++|++++.++              ..|.||||+|+..|+.+++++|+++|+|++.+|..|+||
T Consensus       132 LhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~  211 (743)
T TIGR00870       132 LHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTL  211 (743)
T ss_pred             HHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHH
Confidence            99997      7899999999999763              358999999999999999999999999999999999999


Q ss_pred             HHHHHHcC---------CHHHHHHHHHCCCCC-------CCCCCCCCC
Q 019158          314 LHKAIIGK---------KQAVTNYLLRESANP-------FVVDEVMWK  345 (345)
Q Consensus       314 Lh~Aa~~g---------~~eiv~~LL~~Gad~-------n~~d~~G~T  345 (345)
                      ||+|+..+         ...+.+++++.++..       ++.|.+|.|
T Consensus       212 Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~T  259 (743)
T TIGR00870       212 LHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLT  259 (743)
T ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCC
Confidence            99999986         234667777766554       677888876

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.60  E-value=8.1e-15  Score=138.17  Aligned_cols=122  Identities=20%  Similarity=0.081  Sum_probs=107.2

Q ss_pred             CCCCCCCCcHHHHHHh-----CCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCC
Q 019158          210 CTQRVPPKNPKWAVYG-----RGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKW  278 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~-----~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~  278 (345)
                      +..+..|.||.++++.     .....+|+-|...| |+|++-...|.|+||.|.      +++.|+..|+|||.+|.+|.
T Consensus       296 D~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGS  374 (452)
T KOG0514|consen  296 DQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGS  374 (452)
T ss_pred             cccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCcc
Confidence            4467789999877654     24567777777665 888887578999999996      89999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          279 LPLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       279 TpLh~Aa~~g~~eiv~~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      |+||+||.+||.+++++||.. ++|+...|.+|.|+|.+|...||.+|.-+|..+
T Consensus       375 TALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  375 TALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             HHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            999999999999999999976 699999999999999999999999999888754

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.58  E-value=9.7e-15  Score=113.42  Aligned_cols=64  Identities=19%  Similarity=0.231  Sum_probs=54.6

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHH
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA  295 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~  295 (345)
                      |.||+|.|+..|+.+++++|++.|++++.++                            ..|+||||+|+.+|+.+++++
T Consensus        26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~----------------------------~~g~t~L~~A~~~~~~~~~~~   77 (89)
T PF12796_consen   26 GNTALHYAAENGNLEIVKLLLENGADINSQD----------------------------KNGNTALHYAAENGNLEIVKL   77 (89)
T ss_dssp             SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS----------------------------TTSSBHHHHHHHTTHHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhcccccccC----------------------------CCCCCHHHHHHHcCCHHHHHH
Confidence            8899999999999999999999887776655                            567788999999999999999


Q ss_pred             HHhCCCCCcccC
Q 019158          296 LLKHNVDINAVD  307 (345)
Q Consensus       296 LL~~Gadin~~d  307 (345)
                      |+++|++++.+|
T Consensus        78 Ll~~g~~~~~~n   89 (89)
T PF12796_consen   78 LLEHGADVNIRN   89 (89)
T ss_dssp             HHHTTT-TTSS-
T ss_pred             HHHcCCCCCCcC
Confidence            999999998775

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.58  E-value=4.6e-15  Score=145.74  Aligned_cols=125  Identities=21%  Similarity=0.225  Sum_probs=114.3

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHH
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFV  293 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv  293 (345)
                      +..|+..+..+-++.|+..|++++..+ ..|.|+||.++      |+++|+++|++||..|..||||||.|+..|+..++
T Consensus        44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n-~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~  122 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLNRGASPNLCN-VDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV  122 (527)
T ss_pred             HHhccccccHHHHHHHhccCCCccccC-CccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence            677888888999999999999999999 99999999886      78999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCcc-----------------------------------------------------------cCCCCCCHH
Q 019158          294 DALLKHNVDINA-----------------------------------------------------------VDKDGLTAL  314 (345)
Q Consensus       294 ~~LL~~Gadin~-----------------------------------------------------------~d~~G~TpL  314 (345)
                      ++|+.+|+++..                                                           .+..|-|.|
T Consensus       123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~l  202 (527)
T KOG0505|consen  123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATAL  202 (527)
T ss_pred             HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHH
Confidence            999998876422                                                           223478999


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          315 HKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       315 h~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |.|+..|..++.++|+++|.+++++|.+|||
T Consensus       203 HvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWt  233 (527)
T KOG0505|consen  203 HVAAANGYTEVAALLLQAGYSVNIKDYDGWT  233 (527)
T ss_pred             HHHHhhhHHHHHHHHHHhccCcccccccCCC
Confidence            9999999999999999999999999999997

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.57  E-value=5.2e-15  Score=150.09  Aligned_cols=172  Identities=23%  Similarity=0.259  Sum_probs=140.8

Q ss_pred             hcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCC
Q 019158          138 EFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPP  216 (345)
Q Consensus       138 e~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g  216 (345)
                      +...-. -.+.+|..|++.       |+..|+++.+| -++... +..                         +..+..|
T Consensus        70 e~ea~ldl~d~kg~~plhl-------aaw~g~~e~vk-mll~q~-d~~-------------------------na~~~e~  115 (854)
T KOG0507|consen   70 DYEALLDLCDTKGILPLHL-------AAWNGNLEIVK-MLLLQT-DIL-------------------------NAVNIEN  115 (854)
T ss_pred             cchhhhhhhhccCcceEEe-------hhhcCcchHHH-HHHhcc-cCC-------------------------CcccccC
Confidence            344443 445789999965       66799999998 555443 211                         3355679


Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCC--------CccCCCCCCcHHH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPH--------LATATSKKWLPLH  282 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gad--------vn~~d~~G~TpLh  282 (345)
                      .||||.|+..++.+++.+|+.+|+++-.++ ..+.|+|-.|+      ++..|++..-.        -..++..+-+|||
T Consensus       116 ~tplhlaaqhgh~dvv~~Ll~~~adp~i~n-ns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH  194 (854)
T KOG0507|consen  116 ETPLHLAAQHGHLEVVFYLLKKNADPFIRN-NSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH  194 (854)
T ss_pred             cCccchhhhhcchHHHHHHHhcCCCccccC-cccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc
Confidence            999999999999999999999999999999 99999999876      45555554211        2234566889999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          283 SLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .|+++|+.+|++.|++.|.++|.....| |+||.|+..|..++|.+|++.|++..++|.+|+|
T Consensus       195 laakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qt  256 (854)
T KOG0507|consen  195 LAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQT  256 (854)
T ss_pred             hhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchH
Confidence            9999999999999999999999988877 9999999999999999999999999999999987

>PHA02792 ankyrin-like protein; Provisional

Probab=99.55  E-value=3.4e-14  Score=145.45  Aligned_cols=115  Identities=16%  Similarity=0.074  Sum_probs=101.1

Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCC--CcHHHHHHHcCCH---HHHHHH
Q 019158          228 LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKK--WLPLHSLAASGEF---YFVDAL  296 (345)
Q Consensus       228 ~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G--~TpLh~Aa~~g~~---eiv~~L  296 (345)
                      +.+++++|+++|+++. +  ..+...+|.|+      ++++|+++|++++.+|..|  .||||+|+.....   +++++|
T Consensus       320 ~ieiIK~LId~Ga~~~-r--~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL  396 (631)
T PHA02792        320 YINVIKCMIDEGATLY-R--FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLC  396 (631)
T ss_pred             cHHHHHHHHHCCCccc-c--CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHH
Confidence            6799999999999975 2  23455677775      7899999999999998775  6999998877664   468889


Q ss_pred             HhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          297 LKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       297 L~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++|+++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|+|
T Consensus       397 Is~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~T  445 (631)
T PHA02792        397 KPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGST  445 (631)
T ss_pred             HhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            9999999999999999999999999999999999999999999999987

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.49  E-value=1e-13  Score=140.83  Aligned_cols=156  Identities=19%  Similarity=0.043  Sum_probs=132.4

Q ss_pred             HHHHHHHhCCccccCchhhhcCC---CCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHH
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKP---STFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFF  235 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p---~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklL  235 (345)
                      ++..|++.|+.+.+. +++..-.   ......+               .++.. +.+...|.|.||-|+.+|+.+++++|
T Consensus         6 el~~a~ka~d~~tva-~ll~~~~~r~~~l~~~t---------------rsds~-n~qd~~gfTalhha~Lng~~~is~ll   68 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVA-LLLSSKKGRSGLLFFTT---------------RSDSH-NLQDYSGFTLLHHAVLNGQNQISKLL   68 (854)
T ss_pred             hHHHhhhcccHHHHH-HhccCCCCCCCCCCCCC---------------CCccc-cccCccchhHHHHHHhcCchHHHHHH
Confidence            467788888887776 5554311   1111111               22222 45666899999999999999999999


Q ss_pred             HhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC
Q 019158          236 NSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKD  309 (345)
Q Consensus       236 l~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~  309 (345)
                      +++.+-++..+ ..|.+|||+|+      ++++|+.++..+|..+..|.||||.|+++|+.+++.+||.+|+|.-.+|..
T Consensus        69 le~ea~ldl~d-~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns  147 (854)
T KOG0507|consen   69 LDYEALLDLCD-TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNS  147 (854)
T ss_pred             hcchhhhhhhh-ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcc
Confidence            99999999999 99999999987      789999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHC
Q 019158          310 GLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       310 G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      +.|+|.+|++.|..+++++|++.
T Consensus       148 ~~t~ldlA~qfgr~~Vvq~ll~~  170 (854)
T KOG0507|consen  148 KETVLDLASRFGRAEVVQMLLQK  170 (854)
T ss_pred             cccHHHHHHHhhhhHHHHHHhhh
Confidence            99999999999999999999987

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.47  E-value=5e-13  Score=118.19  Aligned_cols=119  Identities=21%  Similarity=0.212  Sum_probs=110.1

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----------HHHHHHhcCC---CCccCCCCCCc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----------EKVLLNKKLP---HLATATSKKWL  279 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----------i~~lLl~~ga---dvn~~d~~G~T  279 (345)
                      ..+.++++.++..+...++.+++..|++++.++ ..|.||||+|+           ++++|+..|+   ..+.+|..|+|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t  149 (235)
T COG0666          71 LDGRLPLHSAASKGDDKIVKLLLASGADVNAKD-ADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT  149 (235)
T ss_pred             ccccCHHHHHHHcCcHHHHHHHHHcCCCccccc-CCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence            347788999988899999999999999999999 99999999875           5789999999   66666999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       280 pLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      |||+|+..|+.+++++|++.|++++..+..|.|++++|+..++.+++..|+..+
T Consensus       150 pl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         150 PLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999965

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.47  E-value=1.3e-13  Score=141.31  Aligned_cols=141  Identities=13%  Similarity=-0.010  Sum_probs=122.8

Q ss_pred             cccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCC---
Q 019158          170 SQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKK---  246 (345)
Q Consensus       170 ~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d---  246 (345)
                      +.++ .|+...|..+.     +                ++-++.+.|.|+||.|+.+.+.++|.+|++.|||++++.   
T Consensus       160 ~la~-~LL~~~p~lin-----d----------------~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~  217 (782)
T KOG3676|consen  160 ELAR-VLLEIFPKLIN-----D----------------IYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGA  217 (782)
T ss_pred             HHHH-HHHHHhHHHhh-----h----------------hhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcc
Confidence            4454 77888887775     1                124466789999999999999999999999999998863   


Q ss_pred             ------C-------------CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 019158          247 ------S-------------DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV  301 (345)
Q Consensus       247 ------~-------------~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga  301 (345)
                            +             ..|..||-+||      ++++|+++|+|++++|..|+|.||..+..-..++..+++++|+
T Consensus       218 FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga  297 (782)
T KOG3676|consen  218 FFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGA  297 (782)
T ss_pred             ccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCC
Confidence                  1             24677888876      6799999999999999999999999999999999999999999


Q ss_pred             C--CcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          302 D--INAVDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       302 d--in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      +  ...+|..|.|||.+|+..|+.+|.+.+++.
T Consensus       298 ~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  298 NALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9  889999999999999999999999999987

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.47  E-value=8.1e-13  Score=106.36  Aligned_cols=100  Identities=28%  Similarity=0.311  Sum_probs=93.5

Q ss_pred             CCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 019158          245 KKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       245 ~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa  318 (345)
                      .+ ..|.||||+|+      ++++|+..|.+.+..+..|.||||+|+..++.+++++|+.+|++++..+..|.||+|+|+
T Consensus         3 ~~-~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           3 RD-EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             cC-cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            45 68999999987      679999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          319 IGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       319 ~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..++.+++++|+.+|.+++..+..|.|
T Consensus        82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~  108 (126)
T cd00204          82 RNGNLDVVKLLLKHGADVNARDKDGRT  108 (126)
T ss_pred             HcCcHHHHHHHHHcCCCCcccCCCCCC
Confidence            999999999999999999988888765

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.46  E-value=6e-14  Score=100.34  Aligned_cols=55  Identities=36%  Similarity=0.353  Sum_probs=33.4

Q ss_pred             HHhcC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHH
Q 019158          263 LNKKL-PHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA  317 (345)
Q Consensus       263 Ll~~g-advn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~A  317 (345)
                      |+++| ++++.+|..|.||||+||.+|+.+++++|++.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56777 89999999999999999999999999999999999999999999999997

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.46  E-value=2e-13  Score=140.04  Aligned_cols=133  Identities=19%  Similarity=0.078  Sum_probs=113.2

Q ss_pred             CCCCCcHHHHHHh---CCcHHHHHHHHhCC----CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC-----
Q 019158          213 RVPPKNPKWAVYG---RGLDDVSEFFNSGN----YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT-----  274 (345)
Q Consensus       213 ~~~g~tpL~aA~~---~~~~evvklLl~~g----adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-----  274 (345)
                      ...|+|.||.|..   .++.+++..|++.-    -++..-+...|.||||.|.      ++++|+..||||+++.     
T Consensus       140 Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF  219 (782)
T KOG3676|consen  140 GATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFF  219 (782)
T ss_pred             cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcccc
Confidence            4579999999876   34558888887642    2333333368999999985      6899999999998741     


Q ss_pred             ------------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Q 019158          275 ------------------SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN-  335 (345)
Q Consensus       275 ------------------~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-  335 (345)
                                        ..|..||.+||+.++.+|+++|+++|+|++++|..|+|.||..+..-..+|..+++++|++ 
T Consensus       220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~  299 (782)
T KOG3676|consen  220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA  299 (782)
T ss_pred             CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc
Confidence                              1378899999999999999999999999999999999999999999889999999999999 


Q ss_pred             -CCCCCCCCCC
Q 019158          336 -PFVVDEVMWK  345 (345)
Q Consensus       336 -~n~~d~~G~T  345 (345)
                       ..++|++|.|
T Consensus       300 l~~v~N~qgLT  310 (782)
T KOG3676|consen  300 LEHVRNNQGLT  310 (782)
T ss_pred             cccccccCCCC
Confidence             8999999987

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.45  E-value=2.1e-13  Score=96.53  Aligned_cols=54  Identities=43%  Similarity=0.573  Sum_probs=46.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          277 KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       277 G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      |+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999999999999999999999999999999999996

...

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.45  E-value=1.9e-13  Score=105.99  Aligned_cols=69  Identities=23%  Similarity=0.281  Sum_probs=50.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          276 KKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       276 ~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      .|++|||||+.+|+.+++++|+..|++|+.+|+.|-|||.-|+..||.+||++||++|||-..+.-+|.
T Consensus        33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~  101 (117)
T KOG4214|consen   33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGT  101 (117)
T ss_pred             CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCch
Confidence            466677777777777777777777777777777777777777777777777777777777666665554

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.40  E-value=1.6e-12  Score=136.51  Aligned_cols=87  Identities=25%  Similarity=0.164  Sum_probs=82.4

Q ss_pred             HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC------
Q 019158          259 EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE------  332 (345)
Q Consensus       259 i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~------  332 (345)
                      ++++|+.+|+++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+.+      
T Consensus        97 ~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~  176 (664)
T PTZ00322         97 GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFE  176 (664)
T ss_pred             HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999      


Q ss_pred             -CCCCCCCCCCCCC
Q 019158          333 -SANPFVVDEVMWK  345 (345)
Q Consensus       333 -Gad~n~~d~~G~T  345 (345)
                       |++++..+..|+|
T Consensus       177 ~ga~~~~~~~~g~~  190 (664)
T PTZ00322        177 LGANAKPDSFTGKP  190 (664)
T ss_pred             cCCCCCccccCCCC
Confidence             8888888877753

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.37  E-value=1e-11  Score=109.75  Aligned_cols=103  Identities=22%  Similarity=0.195  Sum_probs=93.5

Q ss_pred             CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC---CCcccC
Q 019158          242 PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE-----FYFVDALLKHNV---DINAVD  307 (345)
Q Consensus       242 in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~-----~eiv~~LL~~Ga---din~~d  307 (345)
                      ....+ ..+.+++|.++      ++.+++..|++++.++..|.||||+|+..++     .+++++|++.|+   +.+.+|
T Consensus        66 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          66 LAARD-LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             cccCC-ccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            33445 67889999885      4579999999999999999999999999999     999999999999   666779


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          308 KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       308 ~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+||||+|+..|+.+++++|++.|++++.++..|.|
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t  182 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVT  182 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCc
Confidence            99999999999999999999999999999999988876

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=7.3e-12  Score=122.90  Aligned_cols=111  Identities=20%  Similarity=0.170  Sum_probs=87.7

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHH
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFV  293 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv  293 (345)
                      |.-|+..|-+++|+-.+..--|+...+ ..|.|+||.|.      |+++|+..|++||..|.+||||||+||.++++.+|
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpN-dEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPN-DEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCC-ccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            455666688888888887777888888 88888988764      67888888888988888899999988888888888


Q ss_pred             HHHHhCCCCCcccC-CCCCCHHHHH--HHcCCHHHHHHHHH
Q 019158          294 DALLKHNVDINAVD-KDGLTALHKA--IIGKKQAVTNYLLR  331 (345)
Q Consensus       294 ~~LL~~Gadin~~d-~~G~TpLh~A--a~~g~~eiv~~LL~  331 (345)
                      +.|+++|+.|-+.. .++.|+...+  ...|..+|.+||..
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            88888887765543 4677887665  35677888888853

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.29  E-value=1.3e-11  Score=95.87  Aligned_cols=94  Identities=19%  Similarity=0.144  Sum_probs=79.5

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHH
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFV  293 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv  293 (345)
                      .|... +|..+-|+-.+..|.++|..-  .|++|||+|+      +.++|+..|++++.+|++|-|||..|+..||.+||
T Consensus         7 ~W~vk-NG~~DeVk~~v~~g~nVn~~~--ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV   83 (117)
T KOG4214|consen    7 AWNVK-NGEIDEVKQSVNEGLNVNEIY--GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV   83 (117)
T ss_pred             hhhhc-cCcHHHHHHHHHccccHHHHh--CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence            45554 466666666667777777554  8999999997      78999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCcccCCCCCCHHHH
Q 019158          294 DALLKHNVDINAVDKDGLTALHK  316 (345)
Q Consensus       294 ~~LL~~Gadin~~d~~G~TpLh~  316 (345)
                      ++||+.|++-.....+|.+.+-.
T Consensus        84 klLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   84 KLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHcCcccceeCCCchhHHhh
Confidence            99999999988888888766543

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.27  E-value=1.8e-11  Score=128.45  Aligned_cols=99  Identities=14%  Similarity=0.037  Sum_probs=90.4

Q ss_pred             HHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHH
Q 019158          219 PKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       219 pL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~ei  292 (345)
                      .|+.|+..|+.+++++|++.|+++|.+| ..|+||||+|+      ++++|+.+|++++.+|..|+||||+|+..|+.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRD-YDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            3666777799999999999999999999 99999999997      6899999999999999999999999999999999


Q ss_pred             HHHHHhC-------CCCCcccCCCCCCHHHHHH
Q 019158          293 VDALLKH-------NVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       293 v~~LL~~-------Gadin~~d~~G~TpLh~Aa  318 (345)
                      +++|+.+       |++++..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            9999999       8888888888888776554

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.23  E-value=8.2e-12  Score=89.24  Aligned_cols=50  Identities=38%  Similarity=0.401  Sum_probs=29.7

Q ss_pred             HHhCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          296 LLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       296 LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||++| ++++.+|..|.||||+||..|+.+++++|++.|++++++|..|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~T   51 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQT   51 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCC
Confidence            67888 999999999999999999999999999999999999999999997

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.23  E-value=4.7e-11  Score=109.92  Aligned_cols=114  Identities=17%  Similarity=0.094  Sum_probs=103.4

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccC-CCCCCcHHHHHHHcC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATA-TSKKWLPLHSLAASG  288 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~-d~~G~TpLh~Aa~~g  288 (345)
                      .+.+|.-+...+..+-...|++.--++|.+| ..|.++|..|+      ++++|+..|+|+|.. +..++||||+||.+|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D-~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRD-PSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccC-CCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence            5567888888888888888888777799999 99999999886      689999999999965 678999999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      +.+++++|++.|+.....+.-|+|+-.+|+.-|+.+||.++-
T Consensus        91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999999999999999999999999999999999988764

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=3e-11  Score=118.65  Aligned_cols=82  Identities=21%  Similarity=0.287  Sum_probs=74.8

Q ss_pred             HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          259 EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       259 i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      +++-.+..--|+...+..|.|+||-|++.||.+||++|++.|+++|+.|.+||||||+|+.+++..|++.|++.|+-+.+
T Consensus       565 lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA  644 (752)
T KOG0515|consen  565 LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA  644 (752)
T ss_pred             HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence            45556666678888999999999999999999999999999999999999999999999999999999999999988765


Q ss_pred             CC
Q 019158          339 VD  340 (345)
Q Consensus       339 ~d  340 (345)
                      ..
T Consensus       645 sT  646 (752)
T KOG0515|consen  645 ST  646 (752)
T ss_pred             ee
Confidence            44

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.17  E-value=1.7e-11  Score=128.47  Aligned_cols=128  Identities=14%  Similarity=0.039  Sum_probs=95.5

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccC-CCCCCcHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATA-TSKKWLPLHSL  284 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~-d~~G~TpLh~A  284 (345)
                      ...+-+|+|-.||.+||.+++++|+..|+++..+| ..|.+||..|+      +++.|+.+.++++.+ |+.+.|+|.+|
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~rganiehrd-kkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla  831 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRD-KKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA  831 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHhcccccccc-cccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence            33456788999999999999999999999999999 99999998765      456666666776654 55666777777


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD  340 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d  340 (345)
                      |..|..++|++||.+|++-..++...+|||.+|...|+.+||.+|+.+|+++|.+.
T Consensus       832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrt  887 (2131)
T KOG4369|consen  832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRT  887 (2131)
T ss_pred             cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccc
Confidence            77777777777777777666666666677777777777777777777776666543

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.16  E-value=2.4e-11  Score=127.29  Aligned_cols=191  Identities=16%  Similarity=0.179  Sum_probs=119.9

Q ss_pred             hcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc----------cccCcccccCCC
Q 019158          138 EFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED----------RDCGFQDFVNSS  206 (345)
Q Consensus       138 e~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~----------~~~~f~~~v~~~  206 (345)
                      .+|... -+.++|++|+       ..|+-.|+...+. -|+..+-+.--.+++..|+.          +.++.+.  ...
T Consensus       778 ~rganiehrdkkgf~pl-------Imaatagh~tvV~-~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl--~~g  847 (2131)
T KOG4369|consen  778 VRGANIEHRDKKGFVPL-------IMAATAGHITVVQ-DLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL--NAG  847 (2131)
T ss_pred             Hhcccccccccccchhh-------hhhcccCchHHHH-HHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH--Hhh
Confidence            345554 4567888887       3355566666665 44444443322222222222          1111110  111


Q ss_pred             CCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCC-CCCCCCcchHHH------HHHHHHhcCCCCccCC-CCCC
Q 019158          207 SSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKK-SDGPRRKLFTKE------EKVLLNKKLPHLATAT-SKKW  278 (345)
Q Consensus       207 ~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d-~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-~~G~  278 (345)
                      +.-.-.+....|||-.|..+|+.+++++|+.+|+.||.+. .+.|-.||+.|.      ..+.|++.|.++|..- .+.+
T Consensus       848 ankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrn  927 (2131)
T KOG4369|consen  848 ANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRN  927 (2131)
T ss_pred             ccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccc
Confidence            1112244456677777777777777777777777777664 245677777665      3466777777777653 3445


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          279 LPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       279 TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      |+|-+|+..|+.+++.+||.+.+++..+-+.|.|||+-++..|.+++-++||..|||+|+
T Consensus       928 Taltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~na  987 (2131)
T KOG4369|consen  928 TALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNA  987 (2131)
T ss_pred             cceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccccccc
Confidence            777777777777777777777777777778888888888888888888888888888875

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.05  E-value=3.8e-10  Score=104.00  Aligned_cols=86  Identities=22%  Similarity=0.234  Sum_probs=77.7

Q ss_pred             HHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINA-VDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       260 ~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~-~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      ...|++.--++|.+|..|.++|..|+..|+.++|++||++|+|+|. ++..++||||+|+..|+.++.++|++.|+.+..
T Consensus        28 a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~  107 (396)
T KOG1710|consen   28 ALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYL  107 (396)
T ss_pred             HHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccc
Confidence            3445555556999999999999999999999999999999999986 466889999999999999999999999999999


Q ss_pred             CCCCCCC
Q 019158          339 VDEVMWK  345 (345)
Q Consensus       339 ~d~~G~T  345 (345)
                      .|.-|+|
T Consensus       108 vNsvgrT  114 (396)
T KOG1710|consen  108 VNSVGRT  114 (396)
T ss_pred             ccchhhh
Confidence            9988876

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.01  E-value=5.1e-10  Score=79.06  Aligned_cols=54  Identities=20%  Similarity=0.255  Sum_probs=34.8

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHH
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDA  295 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~  295 (345)
                      |.|++|.|+..|+.+++++|+++|++                            ++.+|.+|+||||+|+..|+.+++++
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d----------------------------in~~d~~g~t~lh~A~~~g~~~~~~~   52 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD----------------------------INAQDEDGRTPLHYAAKNGNIDIVKF   52 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG----------------------------TT-B-TTS--HHHHHHHTT-HHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC----------------------------CCCCCCCCCCHHHHHHHccCHHHHHH
Confidence            45666666666666666666655554                            44555678899999999999999999


Q ss_pred             HH
Q 019158          296 LL  297 (345)
Q Consensus       296 LL  297 (345)
                      ||
T Consensus        53 Ll   54 (54)
T PF13637_consen   53 LL   54 (54)
T ss_dssp             HH
T ss_pred             HC
Confidence            86

...

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.79  E-value=2e-09  Score=110.63  Aligned_cols=88  Identities=17%  Similarity=0.084  Sum_probs=71.6

Q ss_pred             HHHHhCCCC-CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Q 019158          233 EFFNSGNYD-PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATS-KKWLPLHSLAASGEFYFVDALLKHNVDIN  304 (345)
Q Consensus       233 klLl~~gad-in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gadin  304 (345)
                      -++-.++.+ .|.+| ..|+|+||.++      ++++|+++|++++.+|. .||||||-|+.+|+++|+-+||.+|+.+.
T Consensus        35 ~F~~k~c~n~anikD-~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~  113 (1267)
T KOG0783|consen   35 GFSEKSCQNLANIKD-RYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLR  113 (1267)
T ss_pred             HHHHHhhhhhhhHHH-hhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceE
Confidence            344444333 67788 89999999774      67889999999998885 68999999999999999999999999999


Q ss_pred             ccCCCCCCHHHHHHHcC
Q 019158          305 AVDKDGLTALHKAIIGK  321 (345)
Q Consensus       305 ~~d~~G~TpLh~Aa~~g  321 (345)
                      .+|+.|..||..-++-.
T Consensus       114 i~Dkeglsplq~~~r~~  130 (1267)
T KOG0783|consen  114 IKDKEGLSPLQFLSRVL  130 (1267)
T ss_pred             EecccCCCHHHHHhhcc
Confidence            99999999998877643

>PF13606 Ank_3: Ankyrin repeat

Probab=98.74  E-value=1.4e-08  Score=63.16  Aligned_cols=29  Identities=31%  Similarity=0.405  Sum_probs=17.7

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q 019158          309 DGLTALHKAIIGKKQAVTNYLLRESANPF  337 (345)
Q Consensus       309 ~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n  337 (345)
                      +|+||||+||..|+.+++++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            35666666666666666666666666655

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.73  E-value=1.7e-08  Score=63.99  Aligned_cols=32  Identities=31%  Similarity=0.354  Sum_probs=21.1

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 019158          309 DGLTALHKAIIGKKQAVTNYLLRESANPFVVD  340 (345)
Q Consensus       309 ~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d  340 (345)
                      +|+||||+|+..|+.+++++|+++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            36666666666666666666666666666665

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.68  E-value=8.3e-08  Score=94.14  Aligned_cols=85  Identities=20%  Similarity=0.159  Sum_probs=65.1

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH  299 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  299 (345)
                      ||++++.++.++.--|+..|+++|..+..                           .|.||||.|+..|+..-+++|+-+
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpe---------------------------kg~TpLHvAAk~Gq~~Q~ElL~vY  189 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPE---------------------------KGNTPLHVAAKAGQILQAELLAVY  189 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcc---------------------------cCCchhHHHHhccchhhhhHHhhc
Confidence            78888888888888888888888887722                           355677777777777777777777


Q ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 019158          300 NVDINAVDKDGLTALHKAIIGKKQAVTNYLLR  331 (345)
Q Consensus       300 Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~  331 (345)
                      |+|+++.|.+|.||+.+|-..||.++++-|++
T Consensus       190 GAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  190 GADPGAQDSSGMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             cCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence            88777777778888877777777776665544

>PF13606 Ank_3: Ankyrin repeat

Probab=98.67  E-value=2.6e-08  Score=61.88  Aligned_cols=30  Identities=40%  Similarity=0.575  Sum_probs=28.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCcc
Q 019158          276 KKWLPLHSLAASGEFYFVDALLKHNVDINA  305 (345)
Q Consensus       276 ~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~  305 (345)
                      +|+||||+||..|+.+++++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999974

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.65  E-value=1.9e-08  Score=103.57  Aligned_cols=75  Identities=24%  Similarity=0.270  Sum_probs=71.4

Q ss_pred             CccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          270 LATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       270 vn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      .|.+|..|+|+||+|+..|..+++++||++|++++.+|. .|+||||-|+.+|+++|+-+||.+|+.+.++|+.|.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegl  120 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGL  120 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCC
Confidence            678899999999999999999999999999999999986 799999999999999999999999999999999886

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.64  E-value=7.9e-08  Score=95.79  Aligned_cols=77  Identities=25%  Similarity=0.236  Sum_probs=66.9

Q ss_pred             HHHHHhcCCC--Ccc--CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          260 KVLLNKKLPH--LAT--ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       260 ~~lLl~~gad--vn~--~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      +-+|+.+|..  +|.  .+.+|+|+||+||..|++.+.++|+-+|+|+-++|..|+|+|.||-+.|..+|+.+|+++|+-
T Consensus       640 ~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  640 AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence            4566677654  222  356789999999999999999999999999999999999999999999999999999999975


Q ss_pred             C
Q 019158          336 P  336 (345)
Q Consensus       336 ~  336 (345)
                      .
T Consensus       720 ~  720 (749)
T KOG0705|consen  720 D  720 (749)
T ss_pred             c
Confidence            3

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.63  E-value=4.6e-08  Score=61.95  Aligned_cols=33  Identities=45%  Similarity=0.518  Sum_probs=31.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC
Q 019158          276 KKWLPLHSLAASGEFYFVDALLKHNVDINAVDK  308 (345)
Q Consensus       276 ~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~  308 (345)
                      +|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            589999999999999999999999999998874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.51  E-value=2.7e-07  Score=91.46  Aligned_cols=71  Identities=23%  Similarity=0.315  Sum_probs=62.2

Q ss_pred             HHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       262 lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      ++.+.+..++.+|..|.||||+|+..|+...++.|+.+|+++..+|..||+|||.|+..|+.+++..++.+
T Consensus        40 l~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   40 LLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH  110 (560)
T ss_pred             HhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence            34445667888899999999999999999999999999999999999999999999999999888777654

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.36  E-value=3.6e-07  Score=89.44  Aligned_cols=85  Identities=24%  Similarity=0.164  Sum_probs=73.9

Q ss_pred             CCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCHHHHHHHcC
Q 019158          249 GPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGK  321 (345)
Q Consensus       249 ~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadin~~d~~G~TpLh~Aa~~g  321 (345)
                      .+...+++|+      ..+-+.-.|.|++.+|.+.+|+||+||..|+++++++|++. +.+++.+|.+|+|||.-|...+
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence            3445666775      34556667999999999999999999999999999999976 6999999999999999999999


Q ss_pred             CHHHHHHHHHCC
Q 019158          322 KQAVTNYLLRES  333 (345)
Q Consensus       322 ~~eiv~~LL~~G  333 (345)
                      |.+++++|-+.-
T Consensus       585 h~~v~k~L~~~~  596 (622)
T KOG0506|consen  585 HKEVVKLLEEAQ  596 (622)
T ss_pred             cHHHHHHHHHHh
Confidence            999999997653

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.30  E-value=2.1e-06  Score=75.28  Aligned_cols=69  Identities=22%  Similarity=0.227  Sum_probs=63.3

Q ss_pred             CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          267 LPHLATATSKKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       267 gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      +.++|.+|..|||+||+|+..|..+.+.||+.+| +.+...|..|.+++.+|-..|+.+++..|.+.-.+
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            4689999999999999999999999999999999 89999999999999999999999999999877433

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.17  E-value=2.2e-06  Score=85.48  Aligned_cols=91  Identities=15%  Similarity=0.076  Sum_probs=46.4

Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCC--CccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPH--LATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDG  310 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gad--vn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G  310 (345)
                      |.++-.++ ...++.||+|+      ++++++++|..  ++..|..|.|+||-|+..++..++++|++.|+.+-..|..|
T Consensus       889 gg~ll~~~-~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg  967 (1004)
T KOG0782|consen  889 GGSLLIQG-PDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKG  967 (1004)
T ss_pred             CCceEeeC-cchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCC
Confidence            33444444 44455555553      44555555543  34444555555555555555555555555555555555555


Q ss_pred             CCHHHHHHHcCCHHHHHHHH
Q 019158          311 LTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       311 ~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      .||-.-|-+.|..+++.||-
T Consensus       968 ~tp~eraqqa~d~dlaayle  987 (1004)
T KOG0782|consen  968 KTPQERAQQAGDPDLAAYLE  987 (1004)
T ss_pred             CChHHHHHhcCCchHHHHHh
Confidence            55555555555555555543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.15  E-value=5.2e-06  Score=82.90  Aligned_cols=82  Identities=26%  Similarity=0.233  Sum_probs=75.1

Q ss_pred             HhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          264 NKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD--INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       264 l~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad--in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      -..|.++-.++.+-++-||+|+..|+-++|+|+|++|..  +++.|..|.|+||.|+..++..++.+|++.||.+...|.
T Consensus       886 h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~  965 (1004)
T KOG0782|consen  886 HLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDS  965 (1004)
T ss_pred             HhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheeccc
Confidence            346778888888999999999999999999999999953  678899999999999999999999999999999999999


Q ss_pred             CCCC
Q 019158          342 VMWK  345 (345)
Q Consensus       342 ~G~T  345 (345)
                      .|.|
T Consensus       966 kg~t  969 (1004)
T KOG0782|consen  966 KGKT  969 (1004)
T ss_pred             CCCC
Confidence            9987

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.11  E-value=6.4e-06  Score=78.90  Aligned_cols=65  Identities=23%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          279 LPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       279 TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      --|..||+.|+.+.|++|++.|.++|.+|....+||.+|+..||.++|++||++||-...-..+|
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G  102 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDG  102 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCc
Confidence            35778888888888888888888888888888888888888888888888888887654443444

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.04  E-value=9.9e-06  Score=79.86  Aligned_cols=76  Identities=22%  Similarity=0.168  Sum_probs=68.1

Q ss_pred             CccCCCCCCcH------HHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q 019158          270 LATATSKKWLP------LHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEV  342 (345)
Q Consensus       270 vn~~d~~G~Tp------Lh~Aa~~g~~eiv~~LL~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~  342 (345)
                      ...+|.+|.|.      ||.+++.|+.+.+-.||..|+++|..+ ..|.||||+|++.|+..-+++|+-+|||+++.|.+
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~  199 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSS  199 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCC
Confidence            44566677664      899999999999999999999999876 47999999999999999999999999999999999


Q ss_pred             CCC
Q 019158          343 MWK  345 (345)
Q Consensus       343 G~T  345 (345)
                      |.|
T Consensus       200 Gmt  202 (669)
T KOG0818|consen  200 GMT  202 (669)
T ss_pred             CCc
Confidence            987

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.03  E-value=6.5e-06  Score=87.49  Aligned_cols=122  Identities=13%  Similarity=0.049  Sum_probs=97.6

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHH
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLH  282 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh  282 (345)
                      ......|.+.+|.++..++.-+++.+++. |......+ ..|...+|.++      .+.+....|..++.+|..||||||
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld-~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELD-RDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhc-ccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccc
Confidence            34556788889999988999999998886 76677777 78888888754      234455678899999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCc------ccCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          283 SLAASGEFYFVDALLKHNVDIN------AVDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadin------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      ||+.+|+..++..|++.|++..      ..+-.|.|+-.+|...|+..+..+|-+.
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999999999998776543      3455789999999999998888777544

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.00  E-value=4.3e-06  Score=82.05  Aligned_cols=71  Identities=21%  Similarity=0.245  Sum_probs=66.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Q 019158          275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE-SANPFVVDEVMWK  345 (345)
Q Consensus       275 ~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gad~n~~d~~G~T  345 (345)
                      .++..++++|+..|++..++.+.-.|.|++.+|++.+|+||.|+..|+.+++++|++. +.+++.+|..|+|
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rt  575 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRT  575 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCC
Confidence            4456789999999999999999999999999999999999999999999999999986 8999999999987

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.94  E-value=9.3e-06  Score=86.31  Aligned_cols=101  Identities=23%  Similarity=0.082  Sum_probs=79.0

Q ss_pred             HHHHHHHhCCCCCCCCC-CCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 019158          230 DVSEFFNSGNYDPPDKK-SDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD  302 (345)
Q Consensus       230 evvklLl~~gadin~~d-~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  302 (345)
                      .++..-..+++++|..+ -..|.|+||.|+      +.++|++.|+++|..|..|+||||.+...|+...+..|+++|++
T Consensus       635 ~~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~  714 (785)
T KOG0521|consen  635 PRIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD  714 (785)
T ss_pred             hhhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccc
Confidence            33333344555555432 036789999876      57899999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          303 INAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       303 in~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                      .++.+.+|.++|++|....+.+++-+|.
T Consensus       715 ~~a~~~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  715 PNAFDPDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             ccccCccCcchhhHHhhhccccHHHHHh
Confidence            9999999999999997777766665553

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.90  E-value=7.8e-06  Score=86.86  Aligned_cols=71  Identities=28%  Similarity=0.346  Sum_probs=67.6

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       275 ~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|.|+||.|+.+|..-++++|+++|+++|..|..|+||||.+...|+...+..|+++|++.++.+.+|.+
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~  724 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKL  724 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcc
Confidence            45789999999999999999999999999999999999999999999999999999999999999988864

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.88  E-value=5.5e-05  Score=79.15  Aligned_cols=111  Identities=17%  Similarity=-0.028  Sum_probs=87.0

Q ss_pred             HHHHHhCCcHHHHHHHHhC-C---CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          220 KWAVYGRGLDDVSEFFNSG-N---YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~-g---adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      +..|+..|....|+..++. +   .++|..| .-|+++|+.|.      +.++|++++..+       ..+|.+|+..|.
T Consensus        29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d-~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~  100 (822)
T KOG3609|consen   29 FLLAHENGDVPLVAKALEYKAVSKLNINCRD-PLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGS  100 (822)
T ss_pred             HHHHHHcCChHHHHHHHHhccccccchhccC-hHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHH
Confidence            5556666666666655543 2   4788899 99999999884      789999987766       248999999999


Q ss_pred             HHHHHHHHhCCCCC----------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          290 FYFVDALLKHNVDI----------NAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       290 ~eiv~~LL~~Gadi----------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      .++|++++.+-...          ...-.-+-|||.+||..++++|+++||.+|+.+-.
T Consensus       101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen  101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            99999999874332          12234578999999999999999999999998754

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.75  E-value=3.5e-05  Score=76.77  Aligned_cols=67  Identities=24%  Similarity=0.266  Sum_probs=58.9

Q ss_pred             cHHHHHHHcCCHHHHHHHH--hCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          279 LPLHSLAASGEFYFVDALL--KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       279 TpLh~Aa~~g~~eiv~~LL--~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      -|||+++...+.+-+..++  +.+..++.+|..|.||||+|+..|+...++.|+.+||++..+|+.||+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs   90 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWS   90 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccccccccc
Confidence            3599999988877665543  445778899999999999999999999999999999999999999996

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=97.64  E-value=6.6e-05  Score=75.40  Aligned_cols=91  Identities=10%  Similarity=-0.045  Sum_probs=71.0

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCC--CCCCC-CCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYD--PPDKK-SDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLH  282 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gad--in~~d-~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh  282 (345)
                      +-..|.- |+.|.....+..+-+|+.+|..  +|... ...|+|+||.||      +.++|+-+|+|+..+|..|+|+|.
T Consensus       621 e~~lgqq-Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~  699 (749)
T KOG0705|consen  621 EEPLGQQ-LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALF  699 (749)
T ss_pred             CCchHHH-HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhh
Confidence            3334443 4444444667777788888864  33332 146799999997      468999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCC
Q 019158          283 SLAASGEFYFVDALLKHNVDI  303 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadi  303 (345)
                      ||-+.|..+|+..|+.+|+.-
T Consensus       700 yar~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  700 YARQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             hHhhcccHHHHHHHHHcCCCc
Confidence            999999999999999999754

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.44  E-value=0.00023  Score=62.67  Aligned_cols=65  Identities=9%  Similarity=0.056  Sum_probs=53.4

Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKL-PHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDIN  304 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~g-advn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin  304 (345)
                      +.++|.+| ..|||++++|+      .+.+|+.+| +.+...|..|.+++.+|-..|..+++..|.++..+-.
T Consensus         2 e~~in~rD-~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets   73 (223)
T KOG2384|consen    2 EGNINARD-AFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS   73 (223)
T ss_pred             CCCccchh-hhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence            45788888 88899988886      468888888 7888888999999999999999999999887754433

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.30  E-value=0.00013  Score=77.76  Aligned_cols=89  Identities=16%  Similarity=0.032  Sum_probs=68.7

Q ss_pred             CCCCCcchHHH------HHHHHHhc-CCCCccCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCcccCCCCCCHHHHHHH
Q 019158          248 DGPRRKLFTKE------EKVLLNKK-LPHLATATSKKWLPLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAII  319 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~-gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL-~~Gadin~~d~~G~TpLh~Aa~  319 (345)
                      ..|++-+|.++      .+..+++. |......|.+|...+|+ |..++.++.-+|+ -.|..++.+|..||||||||+.
T Consensus       572 ~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~  650 (975)
T KOG0520|consen  572 FRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAF  650 (975)
T ss_pred             CcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhh
Confidence            67899999776      23444443 55566677788888888 4555566655554 5689999999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCC
Q 019158          320 GKKQAVTNYLLRESANPF  337 (345)
Q Consensus       320 ~g~~eiv~~LL~~Gad~n  337 (345)
                      +|+..++..|++.|++..
T Consensus       651 ~G~e~l~a~l~~lga~~~  668 (975)
T KOG0520|consen  651 RGREKLVASLIELGADPG  668 (975)
T ss_pred             cCHHHHHHHHHHhccccc
Confidence            999999999998887654

>smart00248 ANK ankyrin repeats

Probab=97.02  E-value=0.0013  Score=37.76  Aligned_cols=27  Identities=33%  Similarity=0.347  Sum_probs=15.4

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          310 GLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       310 G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      |.||+|+|+..++.+++++|+++|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            455555555555556666555555544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.02  E-value=0.0016  Score=68.43  Aligned_cols=115  Identities=12%  Similarity=0.026  Sum_probs=83.1

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      ....|+..|+...++ +.+.....  .            .++.        +..+.-|+++++.|..+.+.+++++|+++
T Consensus        28 ~fL~a~E~gd~~~V~-k~l~~~~~--~------------~lni--------nc~d~lGr~al~iai~nenle~~eLLl~~   84 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVA-KALEYKAV--S------------KLNI--------NCRDPLGRLALHIAIDNENLELQELLLDT   84 (822)
T ss_pred             HHHHHHHcCChHHHH-HHHHhccc--c------------ccch--------hccChHhhhceecccccccHHHHHHHhcC
Confidence            466788889988887 66654332  1            1222        45667799999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCcchHH------HHHHHHHhcCCCCc----------cCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTK------EEKVLLNKKLPHLA----------TATSKKWLPLHSLAASGEFYFVDALLKHNVD  302 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~A------ai~~lLl~~gadvn----------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  302 (345)
                      +...       |. +|.+|      .++++++.+-....          ..-..+-|||++||..++.+|+++||.+|++
T Consensus        85 ~~~~-------gd-ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen   85 SSEE-------GD-ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC  156 (822)
T ss_pred             cccc-------ch-HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence            6544       33 44433      25677777643321          2234578999999999999999999999987


Q ss_pred             Cc
Q 019158          303 IN  304 (345)
Q Consensus       303 in  304 (345)
                      +.
T Consensus       157 i~  158 (822)
T KOG3609|consen  157 IP  158 (822)
T ss_pred             CC
Confidence            64

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.99  E-value=0.0016  Score=62.92  Aligned_cols=67  Identities=12%  Similarity=-0.072  Sum_probs=49.5

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      +..||+.|..+.++.|++.|.++|..| .....||.+|+      ++++|+++|+-.+.-..+|.- .||++.+.
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD-~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R-C~YgaLnd  112 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVD-RFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR-CHYGALND  112 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhh-cccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch-hhhhhhhH
Confidence            888899999999999999999999998 77778877775      567777777765544444432 35555543

>smart00248 ANK ankyrin repeats

Probab=96.84  E-value=0.0022  Score=36.83  Aligned_cols=29  Identities=38%  Similarity=0.527  Sum_probs=26.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Q 019158          276 KKWLPLHSLAASGEFYFVDALLKHNVDIN  304 (345)
Q Consensus       276 ~G~TpLh~Aa~~g~~eiv~~LL~~Gadin  304 (345)
                      .|.||+|+|+..++.+++++|+.+|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            37899999999999999999999988764

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.71  E-value=0.0025  Score=63.43  Aligned_cols=59  Identities=22%  Similarity=0.093  Sum_probs=49.6

Q ss_pred             HHHHHhcCCCCccC------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 019158          260 KVLLNKKLPHLATA------TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       260 ~~lLl~~gadvn~~------d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa  318 (345)
                      +++|.+++.+.|..      +..--|+||+|+..|...||.+||+.|+|+.++|..|.||..++.
T Consensus       407 ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  407 IEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             HHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            46677777666543      344669999999999999999999999999999999999999887

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.47  E-value=0.0043  Score=61.81  Aligned_cols=56  Identities=23%  Similarity=0.144  Sum_probs=48.5

Q ss_pred             HHHHHHHHhCCCCCcc------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          290 FYFVDALLKHNVDINA------VDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~------~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ...+++|.+++++.|.      .+..-.|+||+|+..|...||.+||+.|+|+.++|..|+|
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grt  465 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRT  465 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCC
Confidence            5678888888877653      3555679999999999999999999999999999999987

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.55  E-value=0.074  Score=48.41  Aligned_cols=48  Identities=23%  Similarity=0.351  Sum_probs=42.0

Q ss_pred             CCHHHHHHHHhCC-CCCcc---cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          288 GEFYFVDALLKHN-VDINA---VDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       288 g~~eiv~~LL~~G-adin~---~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      ....++++.|++| +++|.   +-+.|.|-|.-|+.+++.+++.+||++||-
T Consensus       228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            3567899999999 78875   457899999999999999999999999984

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=85.30  E-value=3.1  Score=36.86  Aligned_cols=105  Identities=15%  Similarity=0.132  Sum_probs=69.4

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----------HHHHHHhcCCCCccCCCC--CCcH
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----------EKVLLNKKLPHLATATSK--KWLP  280 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----------i~~lLl~~gadvn~~d~~--G~Tp  280 (345)
                      ...++.+-.||...+.++|+++-+   +....+    -+.++--|           --.++..+...-...|..  -.--
T Consensus        74 ~~~q~LFElAC~~qkydiV~WI~q---nL~i~~----~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~h  146 (192)
T PF03158_consen   74 YLNQELFELACEEQKYDIVKWIGQ---NLHIYN----PEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQH  146 (192)
T ss_pred             hHHHHHHHHHHHHccccHHHHHhh---ccCCCC----chhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHH
Confidence            346677889999999999999833   333222    23333222           123444432222111110  0123


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 019158          281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR  331 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~  331 (345)
                      |.+|+..|....+--.+++|.+++.      ++|..|+.+++..|+.+++.
T Consensus       147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            6889999999999999999988873      89999999999999999875

These proteins may be involved in promoting survival of infected macrophages [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=82.82  E-value=2  Score=32.11  Aligned_cols=47  Identities=21%  Similarity=0.358  Sum_probs=39.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          279 LPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       279 TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                      ..+..|+..|+.++++.+++.+ .++      ...+..|+...+.+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            4689999999999999999765 222      3579999999999999999986

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	345
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		3e-05
1uoh_A	226	Human Gankyrin Length = 226		4e-05
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		4e-05
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-05
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		8e-05
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		9e-05
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		9e-05
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-04
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		3e-04
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-04
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		4e-04
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		4e-04
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		5e-04
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-04
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		6e-04
2xee_A	157	Structural Determinants For Improved Thermal Stabil		7e-04
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		8e-04

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  AA+G+   V+ LLK+  D+NA D  G+T LH A       +   LL+  A+    
Sbjct: 42  PLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAY 101
Query: 340 DEVMW 344
           D   W
Sbjct: 102 DRAGW 106

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP
Sbjct: 74  WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 132

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP
Sbjct: 75  WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 133

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP
Sbjct: 74  WSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 132

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  AA+G    V+ LLKH  D+NA D DG T LH A       +   LL+  A+
Sbjct: 83  PLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGAD 138

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP
Sbjct: 74  WSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 132

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A  G    V+ LLKH  D+NA+D  G T LH A +     +   LL+  A+   V
Sbjct: 50  PLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAV 109
Query: 340 D 340
           D
Sbjct: 110 D 110

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A  G    V+ LLKH  D+NA+D  G T LH A +     +   LL+  A+   V
Sbjct: 50  PLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAV 109
Query: 340 D 340
           D
Sbjct: 110 D 110

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           +  W PLH  A +G    V+ LLK+  D+NAVD  G+T L  A +     +   LL+  A
Sbjct: 45  ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA 104
Query: 335 N 335
           +
Sbjct: 105 D 105

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           +  W PLH  A +G    V+ LLK+  D+NA D  GLT LH A       +   LL+  A
Sbjct: 78  TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Query: 335 N 335
           +
Sbjct: 138 D 138

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 30/61 (49%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A  G    V+ LLKH  D+NA DK G T LH A +     +   LL+  A+    
Sbjct: 50  PLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNAT 109
Query: 340 D 340
           D
Sbjct: 110 D 110

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            +K  PLH  A       V  LL+H  D++A DK GL  LH A       VT  LL+  A
Sbjct: 56  GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA 115
Query: 335 NPFVVDEVMWK 345
               +D  +W+
Sbjct: 116 CVNAMD--LWQ 124

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A+ G    V+ LLKH  D+NA D   +TALH A     Q V   L++  A+
Sbjct: 70  PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A SG    V+ LLKH  D++A D  G T LH A +     +   LL+  A+
Sbjct: 50  PLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGAD 105

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           + PLH  A  G    V+ LLK   D+NA DKDG T LH A       +   LL+  A+
Sbjct: 36  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           + PLH  A  G    V+ LLK   D+NA DKDG T LH A       +   LL+  A+
Sbjct: 36  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           + PLH  A  G    V+ LLK   D+NA DKDG T LH A       +   LL+  A+
Sbjct: 48  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 105

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	345
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-10
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-08
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-08
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-09
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-07
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-09
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-06
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-08
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-05
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-04
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-07
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-07
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-04
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-07
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-06
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-06
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-08
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-08
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-06
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-06
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-06
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-06
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-07
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-06
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-06
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-06
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-05
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-08
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-06
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-06
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	9e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-08
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-08
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-07
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-06
2etb_A	256	Transient receptor potential cation channel subfam	7e-08
2etb_A	256	Transient receptor potential cation channel subfam	9e-06
2etb_A	256	Transient receptor potential cation channel subfam	1e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-08
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-08
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-08
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	8e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-08
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-07
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-07
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-07
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-07
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-07
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-05
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	9e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-05
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-05
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-06
2rfa_A	232	Transient receptor potential cation channel subfa	6e-07
2rfa_A	232	Transient receptor potential cation channel subfa	5e-06
2rfa_A	232	Transient receptor potential cation channel subfa	1e-05
2rfa_A	232	Transient receptor potential cation channel subfa	2e-05
2rfa_A	232	Transient receptor potential cation channel subfa	4e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-05
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	7e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	6e-04
2pnn_A	273	Transient receptor potential cation channel subfa	6e-05
2pnn_A	273	Transient receptor potential cation channel subfa	6e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-04

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 57.0 bits (139), Expect = 4e-10
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            L +H LAA GE  ++   ++    IN  D++G T L  A    + AV  +LL+  A+P
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 51.2 bits (124), Expect = 3e-08
 Identities = 9/58 (15%), Positives = 16/58 (27%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             PL           V  LL+   D       G  ++  A+    ++V   +      
Sbjct: 103 GTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 50.1 bits (121), Expect = 9e-08
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            L    + G    V  LL   VD+N  D +G T L  A+ G        LL   A+P
Sbjct: 72  ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 48.9 bits (118), Expect = 3e-07
 Identities = 15/57 (26%), Positives = 23/57 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL   AA G+   V+ LL++  D   + K   +AL  A       +   LL    + 
Sbjct: 39  PLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 95

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 58.3 bits (142), Expect = 1e-09
 Identities = 21/62 (33%), Positives = 29/62 (46%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  +  G    V  LL+H  D+NA  K G + LH+A       +   LL+  A+P  V
Sbjct: 314 PLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV 373

Query: 340 DE 341
             
Sbjct: 374 SS 375

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 57.5 bits (140), Expect = 2e-09
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH +A  G     D L+KH V ++A  + G T LH A       +  +LL+  A+ 
Sbjct: 281 PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADV 337

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 56.3 bits (137), Expect = 4e-09
 Identities = 17/65 (26%), Positives = 21/65 (32%)

Query: 272 TATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR 331
                   PLH  +  G    V  LL+     N  +    T LH A       V  YLL+
Sbjct: 9   GGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ 68

Query: 332 ESANP 336
             A  
Sbjct: 69  NKAKV 73

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
             LL K+    A  T K + PLH  A  G+    + LL+ +   NA  K+GLT LH A+ 
Sbjct: 130 LALLEKE-ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVH 188

Query: 320 GKKQAVTNYLLRESANP 336
                +   LL    +P
Sbjct: 189 HNNLDIVKLLLPRGGSP 205

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 21/64 (32%), Positives = 28/64 (43%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
           +  K   PLH  A +G       LL++   +NA  KD  T LH A       +   LL  
Sbjct: 43  SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLEN 102

Query: 333 SANP 336
           +ANP
Sbjct: 103 NANP 106

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 54.4 bits (132), Expect = 2e-08
 Identities = 17/59 (28%), Positives = 22/59 (37%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
             PLH  A  G    V  LL    + N  +K GLT LH         V + L++     
Sbjct: 246 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 304

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 267 LPHLA---TATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQ 323
           L + A    AT+    PLH  A  G    V ALL+       + K G T LH A    K 
Sbjct: 100 LENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKV 159

Query: 324 AVTNYLLRESANP 336
            V   LL   A+P
Sbjct: 160 RVAELLLERDAHP 172

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 14/57 (24%), Positives = 20/57 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH          V  LL      ++   +G T LH A    +  V   LL+   + 
Sbjct: 182 PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 238

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 52.5 bits (127), Expect = 8e-08
 Identities = 17/57 (29%), Positives = 24/57 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH  A   +     +LL++    NA    G+T LH A       +   LL + AN 
Sbjct: 215 PLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG 271

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 19/58 (32%), Positives = 24/58 (41%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           + PLH  A  G    V  LLK+    N V  DG T L  A      +VT+ L   +  
Sbjct: 345 YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE 402

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 49.8 bits (120), Expect = 5e-07
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH  A  G    V  LL++N + N     G T LH A           LL + A+ 
Sbjct: 83  PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ 139

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 299 HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
             +      + GLT LH A       +   LL+  A+P
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASP 40

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 276 KKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
                L + AA G    V ALL+   + NA +  G   +   ++G  + V   LL   A 
Sbjct: 11  PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSAR-VAELLLLHGAE 69

Query: 336 PFVVDEVMW 344
           P   D    
Sbjct: 70  PNCADPATL 78

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 53.2 bits (129), Expect = 7e-09
 Identities = 11/66 (16%), Positives = 20/66 (30%)

Query: 271 ATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
               +    P+H  A  G    +  L +    ++  D  G   +  A     + V  YL 
Sbjct: 72  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 131

Query: 331 RESANP 336
             +   
Sbjct: 132 AAAGGT 137

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 47.1 bits (113), Expect = 9e-07
 Identities = 16/65 (24%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT-ALHKAIIGKKQAVTNYLLRESANP 336
             P+  +   G     + LL H  + N  D   LT  +H A           L R  A  
Sbjct: 46  RRPIQ-VMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104

Query: 337 FVVDE 341
            V D 
Sbjct: 105 DVRDA 109

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 54.7 bits (133), Expect = 3e-09
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A+ G    V  LL++  DINAV++ G   LH A    +  V   L+   A   + 
Sbjct: 75  PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134

Query: 340 DE 341
           ++
Sbjct: 135 NK 136

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 50.5 bits (122), Expect = 1e-07
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH     G+    + L+ +   ++  +K G   + KA    ++ +     +   N 
Sbjct: 108 PLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 50.1 bits (121), Expect = 1e-07
 Identities = 17/62 (27%), Positives = 27/62 (43%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH     G    V+ L+     IN +++   T LH A     + +   LL+  A+   V
Sbjct: 42  PLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAV 101

Query: 340 DE 341
           +E
Sbjct: 102 NE 103

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            + +    G    V   L +   D+N  D  G + LH A    + AV   L+   A 
Sbjct: 8   DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 53.6 bits (130), Expect = 3e-09
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              L + AA G+   V  LL+   D NA+++ G   +   ++G  Q V   LL   A P
Sbjct: 13  DAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQ-VAELLLLHGAEP 70

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 52.4 bits (127), Expect = 9e-09
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           P+H  A  G    +  L +    ++  D  G   +  A     + +  YL   + +
Sbjct: 81  PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 46.7 bits (112), Expect = 9e-07
 Identities = 16/65 (24%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT-ALHKAIIGKKQAVTNYLLRESANP 336
             P+  +   G     + LL H  + N  D   LT  +H A           L R  A  
Sbjct: 46  RRPIQ-VMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104

Query: 337 FVVDE 341
            V D 
Sbjct: 105 DVCDA 109

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 38.6 bits (91), Expect = 6e-04
 Identities = 7/35 (20%), Positives = 11/35 (31%)

Query: 302 DINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            I+ +       L  A    +      LL   A+P
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP 38

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 56.3 bits (137), Expect = 3e-09
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
                 +PLH+  + G +   + LLKH   +NA+D    T LH+A    +  V + LL  
Sbjct: 87  KDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146

Query: 333 SANP 336
            A+P
Sbjct: 147 GADP 150

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH  A       ++ L KH   +NA+D  G TALH+A +         LL   ++P
Sbjct: 250 PLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 54.8 bits (133), Expect = 1e-08
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 276 KKWLPLHSLAASG-EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            K   L   A SG E   +  L   NV+ +A D    T LH A    +  +   LL+  A
Sbjct: 23  YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA 82

Query: 335 N 335
           +
Sbjct: 83  D 83

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 54.0 bits (131), Expect = 2e-08
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 280 PLHSLAASGEFYF---VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH   AS         + LL+   ++N  +KD +T LH A       V   L +  A  
Sbjct: 214 ALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM 273

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 52.5 bits (127), Expect = 6e-08
 Identities = 22/56 (39%), Positives = 26/56 (46%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A       V  LL+H  D++A DK GL  LH A       VT  LL+  A 
Sbjct: 61  PLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC 116

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 51.7 bits (125), Expect = 1e-07
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  A +G       LL +  D + +   G TA         +AV   +L ES   
Sbjct: 283 ALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAV-QQILSESTPM 334

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.6 bits (117), Expect = 1e-06
 Identities = 13/57 (22%), Positives = 22/57 (38%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           + PLH  A+         LL H  D   V+  G +A+  A   + +    Y  +  +
Sbjct: 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.9 bits (102), Expect = 8e-05
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII---GKKQAVTNYLLRESANP 336
           L   A   +   V   L   +      +   TALH A+     K++ V   LLR+ AN 
Sbjct: 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 40.2 bits (95), Expect = 7e-04
 Identities = 6/41 (14%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 296 LLKHNVDINAVDKDGLTALHK-AIIGKKQAVTNYLLRESAN 335
           L   +       +     L + A  G ++ +   L   + N
Sbjct: 10  LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN 50

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            + L   A +GE   V   +K   D +  +++G+TALH AI G   ++ ++L+   AN 
Sbjct: 22  LVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH+      +  VD L+    ++N+ D  G T LH A       +   L++  A  F  
Sbjct: 57  ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT 116

Query: 340 DE 341
             
Sbjct: 117 TL 118

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQA--VTNYLLRESA 334
           W PLH  A+  +     AL++H   I A    DG TA  K    ++       YL     
Sbjct: 88  WTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQ 147

Query: 335 N 335
           +
Sbjct: 148 S 148

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 7/54 (12%), Positives = 15/54 (27%), Gaps = 2/54 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII-GKKQAVTNYLL 330
              L    ++     +      +V +   D    T    A + G++  V     
Sbjct: 157 VYALWD-YSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 14/63 (22%), Positives = 26/63 (41%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
                   L   +  GEF  V  ++    D +  + +G+TALH A+      +  +L++ 
Sbjct: 33  FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92

Query: 333 SAN 335
             N
Sbjct: 93  GVN 95

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
              LH+   +G    V  L++  V++NA D DG T LH A       V  +L+   A  F
Sbjct: 71  ITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130

Query: 338 VVDE 341
            +  
Sbjct: 131 AMTY 134

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 5/40 (12%), Positives = 9/40 (22%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
                     G       L      +  ++K  + AL   
Sbjct: 140 AADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDY 179

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 39.5 bits (93), Expect = 8e-04
 Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            + L     +         + H + +   +   L  L  + +  +  +   ++ E  +P
Sbjct: 6   QVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP 63

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 20/70 (28%), Positives = 28/70 (40%)

Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           S     L   A +G+   V  L+ +  D+ A DK+G T LH A       V   LL   A
Sbjct: 22  SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81

Query: 335 NPFVVDEVMW 344
           +    D+   
Sbjct: 82  DVXAQDKFGK 91

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 55.6 bits (135), Expect = 6e-09
 Identities = 9/62 (14%), Positives = 22/62 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH              ++  +D+N  D +    L+ ++      +T  LL+++    + 
Sbjct: 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQ 273

Query: 340 DE 341
             
Sbjct: 274 AC 275

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 55.3 bits (134), Expect = 9e-09
 Identities = 9/59 (15%), Positives = 16/59 (27%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              + + A   +   +  L +   ++      G     K       AV    L  SA  
Sbjct: 291 LDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPV 349

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 280 PLHSLAASGEFYF--VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH     G  Y   +  L++      A DK   T L +A+  + +   + ++    + 
Sbjct: 141 ALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK 199

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            +H  A  G+   V  L++  V     ++ G TALH A          YL      
Sbjct: 23  KIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV 78

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 9/64 (14%), Positives = 16/64 (25%), Gaps = 2/64 (3%)

Query: 272 TATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR 331
                    LH     G       L       +     G   +H A++  K  +   L+ 
Sbjct: 48  IQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQKPIHLAVMANKTDLVVALVE 105

Query: 332 ESAN 335
            +  
Sbjct: 106 GAKE 109

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 280 PLHSLAASGEFYFVDALL-----KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           PL           +D ++     K ++ ++  +K G + LH AI+   + V    +    
Sbjct: 176 PLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI 235

Query: 335 NP 336
           + 
Sbjct: 236 DV 237

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 1/38 (2%), Positives = 6/38 (15%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
                            L  +  +    +    +   +
Sbjct: 326 GAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 15/79 (18%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
             L+            +  +P   L    E    +         +     G TALH  + 
Sbjct: 101 VALVEGA-------KERGQMPESLLNECDEREVNEI------GSHVKHCKGQTALHWCVG 147

Query: 320 GKKQ--AVTNYLLRESANP 336
              +   +   L++  A+P
Sbjct: 148 LGPEYLEMIKILVQLGASP 166

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 5/39 (12%), Positives = 13/39 (33%)

Query: 298 KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              ++    D + +  +H A    +      L+    +P
Sbjct: 8   FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP 46

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 14/57 (24%), Positives = 20/57 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH    +     ++ LLK   D  A    G T L  A++     +   L    A  
Sbjct: 195 PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 52.2 bits (126), Expect = 7e-08
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  A  GE   V+ L      +   ++ G TALH A   +       LL+   + 
Sbjct: 48  ALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 269 HLATATSKKWLPLHSLAAS-GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTN 327
                      P    +    E           + + A + DG T LH A+I K   +  
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 328 YLLRESAN 335
            L    A+
Sbjct: 176 LLRDAGAD 183

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 257 KEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKD-GLTALH 315
            EE+         L         PLH      +   V  L     D+N  +   G T LH
Sbjct: 138 NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197

Query: 316 KAIIGKKQAVTNYLLRESANP 336
            A+  +  +V   LL+  A+P
Sbjct: 198 LAVEAQAASVLELLLKAGADP 218

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 7/51 (13%), Positives = 10/51 (19%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PL S            L  H         D L+    +         +   
Sbjct: 228 PLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGD 278

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 46.0 bits (110), Expect = 6e-06
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 280 PLHSLAASGEFYFVDALLKHNVD---INAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH         F+D LL  +     ++  +  G TALH A I  + +    L    A  
Sbjct: 12  ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV 71

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 45.6 bits (109), Expect = 9e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 303 INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
              V +DG TALH A+I + +   ++LL  SA    +D 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL 40

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 8/71 (11%), Positives = 19/71 (26%), Gaps = 7/71 (9%)

Query: 278 WLPLHSLAASGEF------YFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
            + +     +              +   + + +   DK GLTAL      +K      + 
Sbjct: 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMME 174

Query: 331 RESANPFVVDE 341
                  + + 
Sbjct: 175 DYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 6/70 (8%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI------IGKKQAVTNYLLR 331
           +  L +      +     L+    DI +  K+G T            I     +    L 
Sbjct: 43  YDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE 102

Query: 332 ESANPFVVDE 341
           + A+   + +
Sbjct: 103 KGADITALYK 112

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 9/46 (19%), Positives = 12/46 (26%), Gaps = 6/46 (13%)

Query: 280 PLHSLAASG------EFYFVDALLKHNVDINAVDKDGLTALHKAII 319
               L   G              L+   DI A+ K     + K I 
Sbjct: 78  LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIF 123

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 6/68 (8%), Positives = 21/68 (30%), Gaps = 3/68 (4%)

Query: 277 KWLPLHSLAASGEFYFVDALLKHNVDINAV---DKDGLTALHKAIIGKKQAVTNYLLRES 333
           ++  + + A  G +     L +   +              L       +  ++ +L+ + 
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 334 ANPFVVDE 341
           A+     +
Sbjct: 66  ADIKSRTK 73

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 53.2 bits (129), Expect = 2e-08
 Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 3/80 (3%)

Query: 260 KVLLNKKLPHLA---TATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHK 316
             L+N             + +  PLH    +     V  L+       A+D+ G TA H 
Sbjct: 26  HRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85

Query: 317 AIIGKKQAVTNYLLRESANP 336
           A   +       LL  +A  
Sbjct: 86  ACEHRSPTCLRALLDSAAPG 105

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 11/56 (19%), Positives = 19/56 (33%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            LHS +  G    V  L++   D +  +    T L  A   +   +        A+
Sbjct: 186 ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 11/79 (13%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEF----YFVDALLKHNVDINAVDKDGLTALHKA 317
           +  +              PLH     G        V+   +   +++  +    T LH A
Sbjct: 1   MATRA-------DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 53

Query: 318 IIGKKQAVTNYLLRESANP 336
           +I    +V   L+   A+P
Sbjct: 54  VITTLPSVVRLLVTAGASP 72

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL     +     V  LL+H  ++NA    G +ALH A       +   L+R  A+ 
Sbjct: 153 PLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 48.2 bits (116), Expect = 9e-07
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 280 PLHSLAASGEFYFVDALLKH----NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             H          + ALL       +D+ A + DGLTALH A+  + Q     LL   A+
Sbjct: 82  AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD 141

Query: 336 P 336
            
Sbjct: 142 I 142

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 46.3 bits (111), Expect = 4e-06
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESAN 335
            LH    +     V  LL+   DI+AVD K G + L  A+     ++   LL+  AN
Sbjct: 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 53.6 bits (130), Expect = 2e-08
 Identities = 20/64 (31%), Positives = 25/64 (39%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
            T+    PLH     G    V  LLKH   +N V  D  T L  A +       N LL+ 
Sbjct: 88  ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH 147

Query: 333 SANP 336
            A+ 
Sbjct: 148 GASV 151

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           W P+H  A  G    +  L+     +N +  D ++ LH+A +G   +    LL+  A  
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.1 bits (126), Expect = 6e-08
 Identities = 15/64 (23%), Positives = 27/64 (42%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
             S    P+H  A  G    V++L+ +  +I+       T L+ A   +++A    LL  
Sbjct: 153 PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212

Query: 333 SANP 336
            A+ 
Sbjct: 213 GADV 216

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII-GKKQAVTNYLLRESANP 336
           PLH++  +        L+    D  A + +G   +           +  +L RE A+ 
Sbjct: 225 PLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL--FLEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 46.3 bits (111), Expect = 5e-06
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PL+    + +   V  LL+   D+N   K   + LH  +    + +   L+   A+    
Sbjct: 193 PLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251

Query: 340 DE 341
           + 
Sbjct: 252 NA 253

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL +   SG +  V+ LL+H   +   + D  + +H+A         N L+    N 
Sbjct: 128 PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNI 183

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 52.0 bits (126), Expect = 2e-08
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            L S AA G+   + +LL++NV++NA +  G TAL    +G  + +   LL   ANP
Sbjct: 8   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPE-IARRLLLRGANP 63

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 50.1 bits (121), Expect = 9e-08
 Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L  +   G       LL    + +  D+ G   +H A           LL   A+
Sbjct: 41  ALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD 95

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 47.4 bits (114), Expect = 8e-07
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           +  +H  A +G    +  LL+   D+N  D +G   LH A       V  +L+
Sbjct: 71  FAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 45.8 bits (110), Expect = 2e-06
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
            LPLH  A  G    V+ L+KH   ++   +  G TA   A +  +  V + + 
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 17/55 (30%), Positives = 26/55 (47%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
             PLH  A  G   ++   L + V +N +DK G TAL+ A  G  + +   L  +
Sbjct: 74  DNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ 128

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 10/64 (15%), Positives = 18/64 (28%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
              LH+ A  G    V  LL      +  + +   A   A      ++        A   
Sbjct: 141 DTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200

Query: 338 VVDE 341
           + + 
Sbjct: 201 LSNA 204

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              L+     G    V+ L    N+++N  +K G TALH A       +   LL + A  
Sbjct: 107 STALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166

Query: 337 FVVDE 341
            + + 
Sbjct: 167 DLRNI 171

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 7/45 (15%), Positives = 11/45 (24%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
                 + +     + E    D L     DI  +     T   K 
Sbjct: 8   PVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKG 52

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 17/64 (26%), Positives = 24/64 (37%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
           W PLH     G    V+ LL+H   +N       + LH A       +   LL   A+  
Sbjct: 44  WTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103

Query: 338 VVDE 341
            V+ 
Sbjct: 104 AVNI 107

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 49.7 bits (120), Expect = 7e-08
 Identities = 18/56 (32%), Positives = 25/56 (44%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            LH  +  G+   V+ LL++  D N  D  G T LH+A       V   LL+  A 
Sbjct: 13  LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 49.3 bits (119), Expect = 9e-08
 Identities = 13/58 (22%), Positives = 23/58 (39%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             PLH  A +G    V  LL +    NAV+  GL  +        +++     +  ++
Sbjct: 77  DSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 16/63 (25%), Positives = 22/63 (34%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH    + +    +ALL    D    D  G T LH A      A    L +    P + 
Sbjct: 48  PLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH 107

Query: 340 DEV 342
             +
Sbjct: 108 SIL 110

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 11/62 (17%), Positives = 17/62 (27%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH          V  LLK   D+N V   G +            +   L + +     +
Sbjct: 154 ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 213

Query: 340 DE 341
             
Sbjct: 214 LP 215

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 280 PLHSLAA-----SGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            LH LA      +     +  +      +N  +    T LH A+I  +  +   LL    
Sbjct: 11  FLH-LAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 69

Query: 335 NP 336
           +P
Sbjct: 70  DP 71

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  +  G    V+ L+    D+NA +  +G TALH A+  +   + + LL+  A+ 
Sbjct: 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 177

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 280 PLHSLAASGEFYFVDALLKHNVD------INAVDKDGLTALHKAIIGKKQAVTNYLLRES 333
           PLH     G    V  L +          + A + +G T LH A I     +   L+   
Sbjct: 81  PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG 140

Query: 334 AN 335
           A+
Sbjct: 141 AD 142

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 259 EKVLLNKKLPHLATATSKKWLPLH---SLAASGEFYFVDALLKHNVDINAVDKDGLTALH 315
                 + LP    A + + L LH    +A       VD ++++   ++A   DG TALH
Sbjct: 154 NGQDFGQPLPG-PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212

Query: 316 KAIIGKKQAVTNYLLRESANPFVVDE 341
            A +  +      LL+  A    V+E
Sbjct: 213 YAALYNQPDCLKLLLKGRALVGTVNE 238

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 51.2 bits (124), Expect = 3e-08
 Identities = 18/57 (31%), Positives = 28/57 (49%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH+  + G +   + L+KH   +N  D    T LH+A    K  +   LL+  A+P
Sbjct: 78  PLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 51.2 bits (124), Expect = 4e-08
 Identities = 20/56 (35%), Positives = 26/56 (46%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A       V+ LL+H  D++A DK GL  LH A       V   L++  A 
Sbjct: 45  PLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 48.9 bits (118), Expect = 2e-07
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PLH  AA G++     LL+H  D    ++DG T L     G    + + L 
Sbjct: 111 PLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD-IQDLLR 160

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 44.3 bits (106), Expect = 9e-06
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L   A +G+   V  L    +V+   ++    T LH A    + +V  YLL+  A+
Sbjct: 11  QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 67

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 52.2 bits (125), Expect = 5e-08
 Identities = 17/65 (26%), Positives = 28/65 (43%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH   ++G    V+ LL+  V +N  D  G + LH A       +   LL + A+   V
Sbjct: 43  ALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAV 102

Query: 340 DEVMW 344
           ++   
Sbjct: 103 NQNGC 107

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 48.7 bits (116), Expect = 7e-07
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 279 LPLHSLAASGEFY-FVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           + + +LA SG+     + +L         D+D  TALH A       +  +LL+    
Sbjct: 8   IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 221 WAVYGRGLDDVSEFFNSGNYDPPDKKSDG--PRRKLFTKEEKVLLNKKLPHLATATSKK- 277
            A    G D++ +              +G  P     +K    +    L   A   +K  
Sbjct: 79  IAAS-AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137

Query: 278 --WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
                +H  AA G    V  LL +    N  D +G T LH A   ++     +L+ + A+
Sbjct: 138 YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197

Query: 336 PFVVDE 341
            ++ ++
Sbjct: 198 IYIENK 203

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 20/88 (22%), Positives = 31/88 (35%)

Query: 257 KEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHK 316
            E    L  K  H+         PLH  A+         LL+   + +A D    TA+H+
Sbjct: 86  DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145

Query: 317 AIIGKKQAVTNYLLRESANPFVVDEVMW 344
           A       + + LL   A+  + D    
Sbjct: 146 AAAKGNLKMVHILLFYKASTNIQDTEGN 173

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 32/64 (50%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP 
Sbjct: 74  WSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 133

Query: 338 VVDE 341
             D 
Sbjct: 134 AKDH 137

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 19/125 (15%), Positives = 35/125 (28%), Gaps = 7/125 (5%)

Query: 217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDG--PRRKLFTKEEKVLLNKKLPHLATAT 274
             P      +   +++     G  +P  K         +   K    +++  L + A+  
Sbjct: 107 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166

Query: 275 SKK---WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR 331
            +      PLH             L+     I   +K+  T L  A  G    +    L 
Sbjct: 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG--LILKRLA 224

Query: 332 ESANP 336
           E    
Sbjct: 225 EGEEA 229

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 16/66 (24%), Positives = 26/66 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  A   +   V  LL   +D +  D  G TAL+ A+           ++++      
Sbjct: 65  PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY 124

Query: 340 DEVMWK 345
            +  WK
Sbjct: 125 GKTGWK 130

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 49.8 bits (120), Expect = 4e-07
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL-TALHKAIIGKKQAVTNYLLRESAN 335
              L+    SG    V   +K N  +    K G  T+ + A++    ++ +Y L E  +
Sbjct: 96  NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 46.0 bits (110), Expect = 6e-06
 Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 1/58 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLT-ALHKAIIGKKQAVTNYLLRESANP 336
            +H    +G    +  LL +    N  +       +  AI  K   +   L +   N 
Sbjct: 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 2/57 (3%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
             +   A      V  LL      N    +    LH+A   +   +   LL    + 
Sbjct: 34  ASYYAIADNNVRLVCTLLNAGALKNL--LENEFPLHQAATLEDTKIVKILLFSGLDD 88

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 295 ALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
                + D    D  G +A + AI      +   LL   A  
Sbjct: 16  KSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 20/63 (31%), Positives = 29/63 (46%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
                     +  +SG+   V  LL+   DIN  + DGLTALH+A I     +  +L+  
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN 95

Query: 333 SAN 335
            AN
Sbjct: 96  GAN 98

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 18/61 (29%), Positives = 26/61 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH  AA G    +  L++   D+N  D DG T LH A    K+     L+    +   V
Sbjct: 202 ALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261

Query: 340 D 340
           +
Sbjct: 262 N 262

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 48.7 bits (117), Expect = 9e-07
 Identities = 13/63 (20%), Positives = 26/63 (41%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
             ++ W+PLH+ A+ G     + L+     + AV+ +G T L  A     + +    +  
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161

Query: 333 SAN 335
              
Sbjct: 162 QGV 164

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
            LH          V  L+++  +IN  D +G   LH A       +  YL+ + A+   V
Sbjct: 76  ALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAV 135

Query: 340 DE 341
           + 
Sbjct: 136 NS 137

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           +  +N++   +  A  ++   +   A   ++     L   +++     K G TALH A  
Sbjct: 156 QNEVNRQGVDIEAARKEEERIMLRDAR--QW-----LNSGHINDVRHAKSGGTALHVAAA 208

Query: 320 GKKQAVTNYLLRESAN 335
                V   L++   +
Sbjct: 209 KGYTEVLKLLIQARYD 224

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
           W PLH+ A  G+      L+++  D+ AV+K G TA   A
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 51.6 bits (125), Expect = 6e-08
 Identities = 18/56 (32%), Positives = 25/56 (44%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PL   A       ++ L+  + D+NAVD  G +ALH A           LL+  AN
Sbjct: 95  PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 50.5 bits (122), Expect = 1e-07
 Identities = 14/57 (24%), Positives = 18/57 (31%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  AA         LLK+  + +  +    T L  A           LL   AN 
Sbjct: 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 18/55 (32%), Positives = 22/55 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            LH  A          LL+ + D N  D  G T LH A+    Q V   L+R  A
Sbjct: 28  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 82

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 48.9 bits (118), Expect = 5e-07
 Identities = 10/56 (17%), Positives = 15/56 (26%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PL   A  G +     LL H  + +  D         A       +   L   +  
Sbjct: 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH+  ++        L+++   D++A   DG T L  A     + +   L+   A+ 
Sbjct: 61  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 118

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 42.4 bits (101), Expect = 7e-05
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 293 VDALLKHNVDI-NAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           +   +     + N  D+ G TALH A    +      LL  SA+ 
Sbjct: 7   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA 51

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            LH  A       V+AL++   DI   D+ GLTAL  A    K       ++    
Sbjct: 113 ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           S+   P  + A   +   +  LL  + D++AVD++G TAL              L    A
Sbjct: 42  SEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA 100

Query: 335 N 335
           +
Sbjct: 101 D 101

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 45.6 bits (109), Expect = 4e-06
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFV 338
            L  +A  G    V  L +   D++  D + GLTALH A    +  V   L+   A+  V
Sbjct: 79  ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV 138

Query: 339 VDE 341
            DE
Sbjct: 139 EDE 141

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 5/73 (6%)

Query: 270 LATATSKK-WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNY 328
           + + T+ +  +        G             D+ +   +  T    A     +   + 
Sbjct: 6   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALSQ 62

Query: 329 LLRESANPFVVDE 341
           LL E  +   VDE
Sbjct: 63  LL-EDRDVDAVDE 74

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 52.1 bits (126), Expect = 6e-08
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 277 KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           K   LH    +G    +  LL+   +++A +  G +AL  A   K   + N+L      
Sbjct: 177 KNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
             PLH     G    V  L+K+  D + +D +G + +H A      ++  YL+ +  + 
Sbjct: 77  STPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV 135

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            +      G +     L++   D+   DK+ +T LH A I  +  +  Y + + A  
Sbjct: 12  DIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV 68

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 280 PLHSLAASGEFYF--VDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL   AA           LL  NV +N  DK    TALH A++     V + LL   AN 
Sbjct: 145 PLM-WAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203

Query: 337 FVVDE 341
              + 
Sbjct: 204 DAQNI 208

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII-GKKQAVTNYLLRESANP 336
              +H  A  G    V  L+    D++ +D++G+T L  A         T  LL  + + 
Sbjct: 110 CSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 43.6 bits (104), Expect = 4e-05
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKD-GLTALHKAIIGKKQAVTNYLLRESANP 336
              LH  A +     V   +     ++ +  D   T LH A      ++   L++  A+P
Sbjct: 43  VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 102

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 52.1 bits (126), Expect = 7e-08
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 277 KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            W PLH+         V+ LL+H  D     K+G T    A I     +    L + A+ 
Sbjct: 39  GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.9 bits (123), Expect = 2e-07
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 280 PLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL           V  LL + +++IN  D DG TAL  A+  K + +   L +  A+ 
Sbjct: 222 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 15/56 (26%), Positives = 22/56 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           P    A +G    +   L    D+N  D  G TA  +A +  K     +L +  AN
Sbjct: 75  PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 47.5 bits (114), Expect = 3e-06
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 4/55 (7%)

Query: 280 PLHSLAASGEFYF----VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
            L     S +          LL H  D+N   + G T L  A+  K   +   LL
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 239

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 46.7 bits (112), Expect = 4e-06
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKD-GLTALHKAIIGKKQAVTNYLLR 331
           A  +    L     + +   V  LL+   ++N  +++ G T LH A+   ++ +   LLR
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 332 ESANP 336
             A+P
Sbjct: 61  HGADP 65

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 45.5 bits (109), Expect = 9e-06
 Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 5/83 (6%)

Query: 264 NKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAI---- 318
            K               L   A  G    +  LL     D+NA D  G  AL  A+    
Sbjct: 135 RKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194

Query: 319 IGKKQAVTNYLLRESANPFVVDE 341
               +A+T+ LL   A+  V  E
Sbjct: 195 DSDVEAITHLLLDHGADVNVRGE 217

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 40.5 bits (96), Expect = 4e-04
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 11/67 (16%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKD----------GLTALHKAIIGKKQAVTNYL 329
                A  G+   +  L K   ++N   K           G TAL  A       V   L
Sbjct: 108 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167

Query: 330 LRES-AN 335
           L E  A+
Sbjct: 168 LDEMGAD 174

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 50.1 bits (121), Expect = 7e-08
 Identities = 18/57 (31%), Positives = 24/57 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH  A  G F   + LL+  V  +A  K   T LH A       +   LL+  A+ 
Sbjct: 37  PLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 49.7 bits (120), Expect = 9e-08
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PLH  A+ G    V+ LLKH  D+NA D   +TALH A     Q V   L++  A+ 
Sbjct: 70  PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 47.8 bits (115), Expect = 4e-07
 Identities = 11/50 (22%), Positives = 19/50 (38%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL 329
            LH          V+ L+K+  D++   K   TA   +I    + +   L
Sbjct: 103 ALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 44.3 bits (106), Expect = 7e-06
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L   A +G+   V  L+ +       D  G + LH A      + T  LLR   +
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 3/71 (4%)

Query: 269 HLATATSKK---WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAV 325
           H     +        L      G       L          +  GLT L  A    K  +
Sbjct: 177 HALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236

Query: 326 TNYLLRESANP 336
             ++L+   + 
Sbjct: 237 FRHILQREFSG 247

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 257 KEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV---DINAVDKDGLTA 313
              +        H  T      LPL   A + ++  V  LL++      + A D  G T 
Sbjct: 116 VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTV 175

Query: 314 LHKAIIGKKQAVTN 327
           LH  ++    +  N
Sbjct: 176 LHALVMIADNSPEN 189

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 13/72 (18%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVD-------------KDGLTALHKAIIGKKQA 324
              LH          V  L+++  D++                  G   L  A   K+  
Sbjct: 91  HSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWD 150

Query: 325 VTNYLLRESANP 336
           V  YLL     P
Sbjct: 151 VVTYLLENPHQP 162

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 49.7 bits (120), Expect = 8e-08
 Identities = 17/56 (30%), Positives = 27/56 (48%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L   A +G+   V  L+ +  D+NA D+ GLT L+ A       +   LL+  A+
Sbjct: 17  KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.2 bits (116), Expect = 3e-07
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PL+   A G    V+ LLK+  D+NAVD  G T LH A       +   LL+  A+
Sbjct: 50  PLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.2 bits (116), Expect = 3e-07
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PLH  A  G     + LLKH  D+NA DK G TA   +I    + +   L 
Sbjct: 83  PLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 50.5 bits (122), Expect = 8e-08
 Identities = 12/62 (19%), Positives = 19/62 (30%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PL           V+ALL    D+      G T +  A+    + V   +       F  
Sbjct: 105 PLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164

Query: 340 DE 341
           + 
Sbjct: 165 NL 166

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 50.5 bits (122), Expect = 8e-08
 Identities = 16/59 (27%), Positives = 25/59 (42%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           + PL   +A GE   V  LL+   D + + K+  +AL  A  G    +   LL    + 
Sbjct: 37  FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 18/59 (30%), Positives = 24/59 (40%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              L   +  G    V  LL+ +VDIN  D +G T L  A+ G        LL   A+ 
Sbjct: 70  ESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADL 128

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVD-INAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            L +H LAA GE   +   L+   + +N  D+ G T L  A    +     +LL   A+P
Sbjct: 3   SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP 62

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 51.9 bits (124), Expect = 8e-08
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 268 PHLATATSKKWLPLHSLAASGE---FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQA 324
                A + + L LH             VD ++++   ++A   DG TALH A +  +  
Sbjct: 181 LPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPD 240

Query: 325 VTNYLLRESANPFVVDE 341
               LL+  A    V+E
Sbjct: 241 CLKLLLKGRALVGTVNE 257

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 269 HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNY 328
           HL    +     LH  A   +   +  LLK    +  V++ G TAL  A   K       
Sbjct: 218 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA-RKKHHKECEE 276

Query: 329 LLRESA----NPFVVDEVMW 344
           LL ++        +  +  W
Sbjct: 277 LLEQAQAGTFAFPLHVDYSW 296

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 51.4 bits (124), Expect = 9e-08
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            LH  A       V+AL++   DI   D+ GLTAL  A    K       ++    
Sbjct: 114 ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 169

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
           S+   P  + A   +   +  LL  + D++AVD++G TAL              L    A
Sbjct: 43  SEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA 101

Query: 335 NP 336
           + 
Sbjct: 102 DL 103

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANP 336
              L  +A  G    V  L +   D++  D + GLTALH A    +  V   L+   A+ 
Sbjct: 78  RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 5/74 (6%)

Query: 269 HLATATSKK-WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTN 327
            + + T+ +  +        G             D+ +   +  T    A     +   +
Sbjct: 6   IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALS 62

Query: 328 YLLRESANPFVVDE 341
            LL E  +   VDE
Sbjct: 63  QLL-EDRDVDAVDE 75

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 1/58 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             P      +G  +  D    +       + +    LH    G    +T  + RES N
Sbjct: 62  LYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYA-ITEPITRESVN 118

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 12/56 (21%), Positives = 18/56 (32%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           P+   A  G    V  L++    + AVD    TA   A       + +   R    
Sbjct: 316 PIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
             PL     +     V  L+K   D    +K   +ALH+A   +   +  Y+L
Sbjct: 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML 219

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
            + LH   A+G +   + + + +V+I    +   T LH          +  L+   A   
Sbjct: 95  PIKLH-TEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 152

Query: 338 V 338
           +
Sbjct: 153 I 153

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  A       V  L+     + +  D+DG T +  A    +  V  YL+++ A+ 
Sbjct: 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 280 PLHSLAASGEFYFVDALLKHNV--------DINAVDKDGLTALHKAIIGKKQAVTNYLLR 331
            LH +A++      + L+ H          D+NA+D D  T L  A++ +++ +  YL++
Sbjct: 128 VLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMK 187

Query: 332 ESANP 336
             A+P
Sbjct: 188 AGADP 192

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 280 PLHSLAASGEFYFVDALLKHN---VDINAVDKDGLTALHKAII-GKKQAV--TNYLLRES 333
            LH  AA+ +F  +  +L       DI  +D++G+TAL        +  V     L+ + 
Sbjct: 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG 261

Query: 334 AN 335
           A 
Sbjct: 262 AK 263

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 48.9 bits (118), Expect = 1e-07
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
             PLH  A  G+   ++ LL    DINA DK  +T L  A+     +    LL + A+  
Sbjct: 41  RKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100

Query: 338 VVDE 341
           V   
Sbjct: 101 VKGP 104

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 47.0 bits (113), Expect = 6e-07
 Identities = 11/58 (18%), Positives = 21/58 (36%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
                    +G+   V   +    D+N   + G   LH A    +  +  +LL + A+
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 13/40 (32%), Positives = 13/40 (32%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKA 317
             PL S    G    V  LL    D      DGLTA    
Sbjct: 74  ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 48.1 bits (116), Expect = 1e-07
 Identities = 22/56 (39%), Positives = 27/56 (48%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A +G    V  LL+   D+NA DK+G T LH A       V   LL   A+
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 46.2 bits (111), Expect = 6e-07
 Identities = 22/57 (38%), Positives = 26/57 (45%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
             PLH  A +G    V  LL+   D+NA DK+G T LH A       V   LL   A
Sbjct: 36  RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 1/80 (1%)

Query: 257 KEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHK 316
           +E + LL+++L H           L  +   G       LLK     N  D  G + +H 
Sbjct: 16  QEVRRLLHRELVHPDALNRFGKTALQ-VMMFGSTAIALELLKQGASPNVQDTSGTSPVHD 74

Query: 317 AIIGKKQAVTNYLLRESANP 336
           A           L+   A+ 
Sbjct: 75  AARTGFLDTLKVLVEHGADV 94

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 48.6 bits (117), Expect = 3e-07
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
             P+H  A +G    +  L++H  D+N  D  G   +H A+     AV ++L    ++  
Sbjct: 69  TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLH 127

Query: 338 VVDE 341
             D 
Sbjct: 128 RRDA 131

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 45.1 bits (108), Expect = 5e-06
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
            LP+H     G    V  L     D++  D  GLT L  A+    Q + + L 
Sbjct: 102 ALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 18/57 (31%), Positives = 25/57 (43%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL   A       ++ L+  + D+NAVD  G +ALH A           LL+  AN 
Sbjct: 127 PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 11/57 (19%), Positives = 16/57 (28%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
           PL   A  G +     LL H  + +  D         A       +   L  E  + 
Sbjct: 193 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 14/57 (24%), Positives = 18/57 (31%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH  AA         LLK+  + +  +    T L  A           LL   AN 
Sbjct: 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 49.0 bits (118), Expect = 6e-07
 Identities = 18/55 (32%), Positives = 22/55 (40%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            LH  A          LL+ + D N  D  G T LH A+    Q V   L+R  A
Sbjct: 60  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 47.1 bits (113), Expect = 3e-06
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 269 HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDI-NAVDKDGLTALHKAIIGKKQAVTN 327
            +A+ +       +S         +   +     + N  D+ G TALH A    +     
Sbjct: 15  MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAK 74

Query: 328 YLLRESANP 336
            LL  SA+ 
Sbjct: 75  RLLEASADA 83

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH+  ++        L+++   D++A   DG T L  A     + +   L+   A+
Sbjct: 93  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 17/56 (30%), Positives = 24/56 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L   A +G    V  L+ +  D+NA D  G T LH A       +   LL+  A+
Sbjct: 17  KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD 72

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.9 bits (118), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A +G    V+ LLK+  D+NAVD  G+T L  A +     +   LL+  A+
Sbjct: 50  PLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD 105

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.5 bits (117), Expect = 4e-07
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             PL   A  G    V+ LLK+  D+NA D +G T LH A +     +   LL+  A+
Sbjct: 81  MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.1 bits (116), Expect = 5e-07
 Identities = 19/51 (37%), Positives = 25/51 (49%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PLH  A  G    V+ LLK+  D+NA DK G TA   +I    + +   L 
Sbjct: 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 269 HLATATSKKWLPLHSLAASGE---FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAV 325
            LA         LH    S +    + VD L++++ +++     G TALH   +      
Sbjct: 161 PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAEC 220

Query: 326 TNYLLRESANPFVVDE 341
              LLR  A+  + +E
Sbjct: 221 LKLLLRGKASIEIANE 236

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 269 HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNY 328
           +L   T K    LH    +     +  LL+    I   ++ G T L  A   K +     
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEE- 255

Query: 329 LLRESA----NPFVVDEVMW 344
           LL ++     N  V  E  W
Sbjct: 256 LLTQALSGRFNSHVHVEYEW 275

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 14/56 (25%), Positives = 24/56 (42%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH+ A +G       L++   +I+   +D  T L +A          YL++  A 
Sbjct: 14  PLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 16/77 (20%), Positives = 23/77 (29%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
           + LL+     +       W P+           V  LL    DIN  D +    LH A  
Sbjct: 94  QYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153

Query: 320 GKKQAVTNYLLRESANP 336
                +   LL    + 
Sbjct: 154 SGCVDIAEILLAAKCDL 170

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 3e-07
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A    +  V   L  + D+   +K+G T L  A +  +      + +   +
Sbjct: 180 PLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 3e-07
 Identities = 15/64 (23%), Positives = 27/64 (42%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
            + LH  A SG     + LL    D++AV+  G + LH A    +       L   ++  
Sbjct: 145 NICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204

Query: 338 VVDE 341
           + ++
Sbjct: 205 LKNK 208

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 48.6 bits (117), Expect = 7e-07
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
             PL   A +     V  L+K    ++  D +G T LH A       V  YLL
Sbjct: 45  RTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLL 97

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 6/36 (16%), Positives = 16/36 (44%)

Query: 300 NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           +++     ++  + LH A       + + L++  AN
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN 36

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 2e-07
 Identities = 52/396 (13%), Positives = 103/396 (26%), Gaps = 115/396 (29%)

Query: 14  FPHSLHSP-PQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLL--LQNEDRVIGDC 70
             H + S    S   +LF +  L        + +    L+    +L+  ++ E R     
Sbjct: 51  IDHIIMSKDAVSGTLRLFWT--LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR--QPS 106

Query: 71  LVFEEGVFEDPYLENDNVP-PPRKPRRSRGKQNVVQVEAENLVPDKW----------KQV 119
           ++    + +   L NDN         R +     ++     L P K           K  
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQ-PYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 120 QEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKL-SQLNPPLV- 177
                +         +Q +   ++      +L L + +  E +     KL  Q++P    
Sbjct: 166 -----VALDVCLSYKVQCKMDFKIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 178 -LDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGL---DDVS- 232
             D  S        S +                          K   Y   L    +V  
Sbjct: 216 RSDHSSNIKLR-IHSIQAELRRLL-------------------KSKPYENCLLVLLNVQN 255

Query: 233 ----EFFNSG-------------NYDPPDKKSD---GPRRKLFTKEE------KVLLNK- 265
                 FN               ++      +           T +E      K L  + 
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 266 -KLPHLATATSKKWLPLH-SLAASGEFYFVDALLKHNVD-INAVDKDGLTALHKAIIGKK 322
             LP     T+    P   S+ A          ++  +   +         L   I   +
Sbjct: 316 QDLPREVLTTN----PRRLSIIA--------ESIRDGLATWDNWKHVNCDKLTTII---E 360

Query: 323 QAVTN---------Y----LLRESAN-PFVVDEVMW 344
            ++           +    +   SA+ P ++  ++W
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 10/57 (17%), Positives = 17/57 (29%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
            LH       F     L+++   +   DK     LH+A       +   L     + 
Sbjct: 110 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 48.2 bits (116), Expect = 9e-07
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 280 PLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV 338
           PLH      EF+ V  LL      +   D+DG   LH ++  +   +T++LL +  N  +
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64

Query: 339 VDEV 342
            D  
Sbjct: 65  DDYP 68

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 47.8 bits (115), Expect = 1e-06
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNV--DINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           W P H   + G    V +L    +  D+N +   G+T LH A+  K   V+ +L+   A+
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 132

Query: 336 P 336
            
Sbjct: 133 V 133

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 45.9 bits (110), Expect = 5e-06
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 278 WLPLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLL-RESAN 335
            +PLH  A+ G    ++ L       +N  DK G T L  A+          L+ +  A 
Sbjct: 141 QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200

Query: 336 PFVVDE 341
             +VD 
Sbjct: 201 YDLVDN 206

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 278 WLPLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           W PL    A G       L+ K+  + + VD  G  A   A+    + V  + L
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 42.8 bits (102), Expect = 6e-05
 Identities = 13/56 (23%), Positives = 17/56 (30%), Gaps = 3/56 (5%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINA---VDKDGLTALHKAIIGKKQAVTNYLL 330
            +PLH   +         LL    ++N     D  G T  H A       V   L 
Sbjct: 37  RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 19/59 (32%), Positives = 24/59 (40%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
             PLH  A +G    V  LL    D+NA  KDG T  H A       +   L  + A+ 
Sbjct: 43  NTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 47.4 bits (114), Expect = 4e-07
 Identities = 21/58 (36%), Positives = 27/58 (46%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             PLH+ A +G    V  LL    D+NA  KDG T LH A       +   LL + A+
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 43.5 bits (104), Expect = 8e-06
 Identities = 9/38 (23%), Positives = 11/38 (28%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALH 315
             P H    +G    V  L     D+NA         H
Sbjct: 76  NTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 47.0 bits (113), Expect = 6e-07
 Identities = 22/56 (39%), Positives = 27/56 (48%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A +G    V  LL+   D+NA DK+G T LH A       V   LL   A+
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 46.6 bits (112), Expect = 8e-07
 Identities = 21/51 (41%), Positives = 25/51 (49%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PLH  A +G    V  LL+   D+NA DK+G T LH A       V   LL
Sbjct: 71  PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 46.6 bits (112), Expect = 8e-07
 Identities = 22/56 (39%), Positives = 27/56 (48%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PLH  A +G    V  LL+   D+NA DK+G T LH A       V   LL   A+
Sbjct: 38  PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.2 bits (116), Expect = 6e-07
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 260 KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII 319
             L N +        S    PL      G    +D L+++   +   D +G TAL  A+ 
Sbjct: 25  DFLRNYR-------DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVK 77

Query: 320 GKKQAVTNYLLRESAN 335
             +  +   LL + +N
Sbjct: 78  NNRLGIAEKLLSKGSN 93

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.2 bits (116), Expect = 6e-07
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PL   +  G    V  LL+   DI+A D  GLTA   A I  +Q V     
Sbjct: 137 PLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 14/58 (24%), Positives = 22/58 (37%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
             PL      G       LL+H  ++N  + +G T L  A    +  +   LL   A+
Sbjct: 102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD 159

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.0 bits (113), Expect = 1e-06
 Identities = 14/56 (25%), Positives = 22/56 (39%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L     +      + LL    ++N  D  G T L  +II     ++ +LL   AN
Sbjct: 71  ALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN 126

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 280 PLHSLAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
           PL   A   +   +  LLK    +++     G TALH A +         L+  +  
Sbjct: 6   PLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE 62

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAII-GKK---QAVTNYLLRESAN 335
           PL   A  G    V  L++H  DI A D  G T LH  I+   K     + N LL     
Sbjct: 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 10/67 (14%)

Query: 280 PLHSLAASG----EFYFVDALLKHNVDINA------VDKDGLTALHKAIIGKKQAVTNYL 329
            LH L             + LL ++   +        +  GLT    A +     +  +L
Sbjct: 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

Query: 330 LRESANP 336
           +++  + 
Sbjct: 217 MQKRKHI 223

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDI-----NAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
            LH  A          L++   ++      +   +G TALH A+I +   +   LL   A
Sbjct: 40  ALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGA 99

Query: 335 N 335
           +
Sbjct: 100 S 100

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 13/70 (18%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKD-------------GLTALHKAIIGKKQAVT 326
            LH    +     V ALL     ++A                 G   L  A     + + 
Sbjct: 78  ALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIV 137

Query: 327 NYLLRESANP 336
             L+   A+ 
Sbjct: 138 RLLIEHGADI 147

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 48.2 bits (116), Expect = 6e-07
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
            L +          + L      ++ VD +G T L+ A+      +   L+   A+
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 45.5 bits (109), Expect = 5e-06
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 5/58 (8%)

Query: 278 WLPLHSLAASGEFYF-----VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           +  L       E        V  L+++  D +  D  G TA+  A       ++  L 
Sbjct: 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 45.5 bits (109), Expect = 6e-06
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           PL+    + +     AL+    DIN  +    +    A    +  +  Y+L
Sbjct: 42  PLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML 92

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 45.1 bits (108), Expect = 7e-06
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 280 PLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKK-----QAVTNYLLRES 333
            L   A  G    V  LL+    DI+  +  G TAL +A+  ++     Q +   L+   
Sbjct: 109 ALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG 168

Query: 334 ANP 336
           A+ 
Sbjct: 169 ADQ 171

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 42.4 bits (101), Expect = 7e-05
 Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           P     A G    +  +LKH   D+N  ++ G  AL  A           LL
Sbjct: 75  PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 49.3 bits (117), Expect = 7e-07
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI 318
           PLH L +      V  L+KH  +    D  G + L KA+
Sbjct: 134 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAV 172

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 46.6 bits (110), Expect = 6e-06
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI 318
            L+  A  G    VDALL +  D    +K GL  +    
Sbjct: 286 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 282 HSLAASGEFYFVDALLKHNVDINA-VDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
           H    S      DA     +++N  VD+ G T LH         +  +L++  +N    D
Sbjct: 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD 161

Query: 341 E 341
            
Sbjct: 162 N 162

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PL    A+      + LL++  ++N  D  G   LH A I     +    L+  A+    
Sbjct: 238 PLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

Query: 340 DE 341
           D 
Sbjct: 298 DS 299

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 12/70 (17%)

Query: 278 WLPLHSLAASGEFYFVDALLKH---NVDINAVDKDGLTALHKAIIGKKQ---------AV 325
            LPL   A + + + V  L ++     D+   D  G T LH  +               +
Sbjct: 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKM 200

Query: 326 TNYLLRESAN 335
            + LL + A 
Sbjct: 201 YDLLLIKCAK 210

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 16/72 (22%)

Query: 280 PLHSLAASGEFYF---------VDALLKHNVDINA-------VDKDGLTALHKAIIGKKQ 323
            LH+L A  +             D LL     +         ++ DGL+ L  A    K 
Sbjct: 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238

Query: 324 AVTNYLLRESAN 335
            +  +++R    
Sbjct: 239 GIFQHIIRREIA 250

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 278 WLPLHSLAASGEFYFVDALLKH---NVDINAVDKDGLTALHKA-IIGKKQAVTNYLLRES 333
            LPL   A + +   V  LL++     DI+A D  G T LH    +          +   
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208

Query: 334 ANP 336
            N 
Sbjct: 209 YNE 211

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 11/73 (15%)

Query: 280 PLHSLAASGEFYFVDALL-------KHNVDINAVDKD-GLTALHKAIIGKKQ---AVTNY 328
            +    A      +++LL       K   D    D + G T L KA++            
Sbjct: 16  SIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIAL 75

Query: 329 LLRESANPFVVDE 341
           LL  +     + +
Sbjct: 76  LLDVARKTDSLKQ 88

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 8/68 (11%)

Query: 276 KKWLPLHSLAASGEFYFVDAL--------LKHNVDINAVDKDGLTALHKAIIGKKQAVTN 327
           + +  L +L    +   +D +        +K       +  D    L  A+    Q    
Sbjct: 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACA 336

Query: 328 YLLRESAN 335
            LL   + 
Sbjct: 337 LLLSIPSV 344

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.96
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.95
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.95
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.94
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.94
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.94
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.94
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.94
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.94
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.93
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.93
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.93
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.93
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.93
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.93
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.93
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.93
2rfa_A	232	Transient receptor potential cation channel subfa	99.93
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.93
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.93
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.93
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.93
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.92
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.92
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.92
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.92
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.92
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.92
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.92
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.92
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.92
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.92
2etb_A	256	Transient receptor potential cation channel subfam	99.92
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.91
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.91
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.91
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.91
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.91
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.91
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.91
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.91
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.91
2pnn_A	273	Transient receptor potential cation channel subfa	99.91
2rfa_A	232	Transient receptor potential cation channel subfa	99.91
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.91
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.91
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.91
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.91
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.91
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.91
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.91
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.91
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.91
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.91
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.91
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.91
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.9
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.9
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.9
2pnn_A	273	Transient receptor potential cation channel subfa	99.9
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.9
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.9
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.9
2etb_A	256	Transient receptor potential cation channel subfam	99.9
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.9
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.9
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.9
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.9
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.89
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.89
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.89
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.88
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.88
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.88
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.88
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.88
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.87
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.86
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.85
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.85
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.84
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.84
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.84
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.83
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.83
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.83
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.82
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.81
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.81
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.8
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.79
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.79
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.79
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.78
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.77
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.77
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.76
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.76
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.76
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.75
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.72
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.68
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.67
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.66
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.65
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.65
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.56

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.96  E-value=2.3e-29  Score=218.59  Aligned_cols=154  Identities=20%  Similarity=0.190  Sum_probs=136.0

Q ss_pred             CHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 019158          157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFN  236 (345)
Q Consensus       157 ~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl  236 (345)
                      +..++.|++.|+++.++ .|+....+ +                         +..+..|+||++.|+..++.+++++|+
T Consensus         5 g~~L~~Aa~~G~~~~v~-~Ll~~Gad-v-------------------------n~~d~~g~t~l~~a~~~~~~~~~~~ll   57 (169)
T 4gpm_A            5 GKRLIEAAENGNKDRVK-DLIENGAD-V-------------------------NASDSDGRTPLHHAAENGHKEVVKLLI   57 (169)
T ss_dssp             HHHHHHHHHTTCHHHHH-HHHHTTCC-T-------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHH-HHHHCCCC-C-------------------------CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            34588999999999998 77765432 1                         224457999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC
Q 019158          237 SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDG  310 (345)
Q Consensus       237 ~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G  310 (345)
                      +.|++++.++ ..|+||||+|+      ++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus        58 ~~gad~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G  136 (169)
T 4gpm_A           58 SKGADVNAKD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDG  136 (169)
T ss_dssp             HTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             hcccchhhhc-cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence            9999999999 99999999997      7899999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          311 LTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       311 ~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      +||||+|+..|+.+++++|+++||+++.
T Consensus       137 ~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A          137 RTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            9999999999999999999999999864

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.95  E-value=7.5e-28  Score=223.59  Aligned_cols=137  Identities=20%  Similarity=0.173  Sum_probs=130.7

Q ss_pred             CCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHH
Q 019158          208 STCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPL  281 (345)
Q Consensus       208 ~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpL  281 (345)
                      ..+..+..|+||||.|+..|+.+++++|++.|++++..+ ..|.||+|+|+      ++++|+++|++++.+|..|+|||
T Consensus        78 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL  156 (269)
T 4b93_B           78 GVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPL  156 (269)
T ss_dssp             CTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred             CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-CCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence            334566789999999999999999999999999999999 99999999986      68999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          282 HSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+|++++|..|+|
T Consensus       157 ~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T  220 (269)
T 4b93_B          157 IYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRT  220 (269)
T ss_dssp             HHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             HHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999998

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.95  E-value=1.8e-27  Score=206.69  Aligned_cols=127  Identities=24%  Similarity=0.216  Sum_probs=122.6

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHH
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFY  291 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~e  291 (345)
                      +.|+.|+..|+.+++++|+++|+++|.+| ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~   84 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE   84 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence            35888888899999999999999999999 99999999986      689999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          292 FVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       292 iv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T  138 (169)
T 4gpm_A           85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT  138 (169)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            999999999999999999999999999999999999999999999999999987

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.94  E-value=2e-26  Score=205.99  Aligned_cols=134  Identities=16%  Similarity=0.147  Sum_probs=125.7

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHH
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSL  284 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~A  284 (345)
                      ..+..|.||||.|+..++.+++++|+++|++++..+ ..|.||||+|+      ++++|+++|++++..+..|+||||+|
T Consensus        68 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A  146 (231)
T 3aji_A           68 DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRA  146 (231)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence            345578999999999999999999999999999999 99999999986      68999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       147 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  207 (231)
T 3aji_A          147 AAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKT  207 (231)
T ss_dssp             HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             HHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999987

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.94  E-value=2.2e-26  Score=210.03  Aligned_cols=134  Identities=16%  Similarity=0.050  Sum_probs=120.0

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCC-CCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHH
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNY-DPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHS  283 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~ga-din~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~  283 (345)
                      ..+..|.||||.|+..++.+++++|+++|. +++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+
T Consensus        85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~  163 (253)
T 1yyh_A           85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW  163 (253)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            345568888888888888888888888876 788888 88888888886      6799999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          284 LAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       284 Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       164 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  225 (253)
T 1yyh_A          164 AAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL  225 (253)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999987

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.94  E-value=1.1e-26  Score=199.16  Aligned_cols=159  Identities=15%  Similarity=0.042  Sum_probs=141.1

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+++.++ .++...+..+.                         ..+..|.||||.|+..++.+++++|+++|
T Consensus         6 L~~A~~~g~~~~v~-~ll~~~~~~~~-------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g   59 (172)
T 3v30_A            6 IHQLAAQGELDQLK-EHLRKGDNLVN-------------------------KPDERGFTPLIWASAFGEIETVRFLLEWG   59 (172)
T ss_dssp             HHHHHHTTCHHHHH-HHHTTCSGGGG-------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred             HHHHHHcCCHHHHH-HHHHcCccccc-------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            47799999999998 88876654221                         23456899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCH
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA  313 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~Tp  313 (345)
                      ++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        60 ~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  138 (172)
T 3v30_A           60 ADPHILA-KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTP  138 (172)
T ss_dssp             CCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCchhhc-ccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            9999999 99999999987      6899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          314 LHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       314 Lh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||+|+..|+.+++++|+++|+++..++..|.|
T Consensus       139 l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~  170 (172)
T 3v30_A          139 MDLAVALGYRKVQQVIENHILKLFQSNLVPAD  170 (172)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHSCC------
T ss_pred             HHHHHHhCcHHHHHHHHHHHHHHhcccCCCCC
Confidence            99999999999999999999999988887765

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.94  E-value=3.4e-26  Score=209.60  Aligned_cols=167  Identities=14%  Similarity=0.031  Sum_probs=142.8

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .+...|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..|.||||.|
T Consensus        40 ~~~~~g~t~L-------~~A~~~g~~~~v~-~Ll~~ga~-~-------------------------~~~~~~g~tpL~~A   85 (282)
T 1oy3_D           40 LQNDLGQTAL-------HLAAILGEASTVE-KLYAAGAG-V-------------------------LVAERGGHTALHLA   85 (282)
T ss_dssp             CCCTTSCCHH-------HHHHHHTCHHHHH-HHHHTTCC-S-------------------------SCCCTTSCCHHHHH
T ss_pred             ccCCCCCCHH-------HHHHHcCCHHHHH-HHHHcCCC-C-------------------------CCCCCCCCCHHHHH
Confidence            4456788887       5588899999997 66654332 1                         12345699999999


Q ss_pred             HhCCcHHHHHHHHhCCCC-----------------------------------------------CCCCCCCCCCCcchH
Q 019158          224 YGRGLDDVSEFFNSGNYD-----------------------------------------------PPDKKSDGPRRKLFT  256 (345)
Q Consensus       224 ~~~~~~evvklLl~~gad-----------------------------------------------in~~d~~~G~TpLh~  256 (345)
                      +..++.+++++|+++|++                                               ++..+ ..|.||||+
T Consensus        86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~  164 (282)
T 1oy3_D           86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN-YDGHTPLHV  164 (282)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCC-TTSCCHHHH
T ss_pred             HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcC-CCCcCHHHH
Confidence            999999999999998865                                               67788 899999999


Q ss_pred             HH------HHHHHHhcCCCCccCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Q 019158          257 KE------EKVLLNKKLPHLATATSK-KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       257 Aa------i~~lLl~~gadvn~~d~~-G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~L  329 (345)
                      |+      ++++|+++|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus       165 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~L  244 (282)
T 1oy3_D          165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL  244 (282)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHH
Confidence            96      789999999999999854 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCCCCCCCCCCCC
Q 019158          330 LRESANPFVVDEVMWK  345 (345)
Q Consensus       330 L~~Gad~n~~d~~G~T  345 (345)
                      +++|++++.+|..|+|
T Consensus       245 l~~ga~~~~~~~~g~t  260 (282)
T 1oy3_D          245 RAHGAPEPEDGGDKLS  260 (282)
T ss_dssp             HHTTCCCCCCC-----
T ss_pred             HHcCCCcCcCCCcccc
Confidence            9999999999999987

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.94  E-value=4.4e-26  Score=205.18  Aligned_cols=170  Identities=18%  Similarity=0.122  Sum_probs=138.3

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      ....|.+|+       +.|+..|+.+.++ .|+...+....                      .....+..|.||||.|+
T Consensus         4 ~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~~~~~~~----------------------~~~~~~~~g~t~L~~A~   53 (236)
T 1ikn_D            4 LTEDGDSFL-------HLAIIHEEKALTM-EVIRQVKGDLA----------------------FLNFQNNLQQTPLHLAV   53 (236)
T ss_dssp             ---CCCCTT-------HHHHHTTCSSSSS-CCCC-----CC----------------------CCCCCCTTCCCHHHHHH
T ss_pred             CCCCCCchh-------HHHHHcCChhHHH-HHHHHhhccHH----------------------HhhccCCCCCCHHHHHH
Confidence            456788998       4588999999998 77665442110                      00224456889999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCC------CccCCCCCCcHHHHHHHcCCHHH
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPH------LATATSKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gad------vn~~d~~G~TpLh~Aa~~g~~ei  292 (345)
                      ..++.+++++|+++|++++.++ ..|+||||+|+      ++++|+.+|++      ++..+..|+||||+|+..|+.++
T Consensus        54 ~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~  132 (236)
T 1ikn_D           54 ITNQPEIAEALLGAGCDPELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI  132 (236)
T ss_dssp             HTTCHHHHHCCCSCCCCSCCCC-TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHH
Confidence            9999999999999999999999 89999999886      67889988876      56778889999999999999999


Q ss_pred             HHHHHhCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          293 VDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       293 v~~LL~~Gadin~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       133 v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  186 (236)
T 1ikn_D          133 VELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS  186 (236)
T ss_dssp             HHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCC
T ss_pred             HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCC
Confidence            9999999999999887 8999999999999999999999999999999998886

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.94  E-value=1.3e-25  Score=200.06  Aligned_cols=169  Identities=17%  Similarity=0.096  Sum_probs=149.4

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +.|+..|+.+.++ .|+...+....            .           ...+..|.||||.|+
T Consensus        32 ~~~~g~t~L-------~~A~~~~~~~~v~-~Ll~~~~~~~~------------~-----------~~~~~~g~t~L~~A~   80 (228)
T 2dzn_A           32 KDQDGRIPL-------HWSVSFQAHEITS-FLLSKMENVNL------------D-----------DYPDDSGWTPFHIAC   80 (228)
T ss_dssp             CCTTSCCHH-------HHHHHTTCHHHHH-HHHHTCTTCCG------------G-----------GCCCTTSCCHHHHHH
T ss_pred             CCCCCCCHH-------HHHHHcCCHHHHH-HHHhccccccc------------c-----------ccCCCCCCCHHHHHH
Confidence            566777877       5588899999997 76665532111            0           113456899999999


Q ss_pred             hCCcHHHHHHHHhCC--CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 019158          225 GRGLDDVSEFFNSGN--YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDAL  296 (345)
Q Consensus       225 ~~~~~evvklLl~~g--adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~L  296 (345)
                      ..++.+++++|+++|  ++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus        81 ~~~~~~~~~~Ll~~g~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  159 (228)
T 2dzn_A           81 SVGNLEVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL  159 (228)
T ss_dssp             HHCCHHHHHHHHSSSSCCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HcCCHHHHHHHHhCCCCcccccCC-cCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence            999999999999999  8999999 99999999986      68999999999999999999999999999999999999


Q ss_pred             HhCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCC
Q 019158          297 LKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLL-RESANPFVVDEVMWK  345 (345)
Q Consensus       297 L~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL-~~Gad~n~~d~~G~T  345 (345)
                      +++| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+|
T Consensus       160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t  210 (228)
T 2dzn_A          160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK  210 (228)
T ss_dssp             HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCB
T ss_pred             HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCc
Confidence            9999 999999999999999999999999999999 889999999999987

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.93  E-value=1.7e-25  Score=207.44  Aligned_cols=161  Identities=17%  Similarity=0.101  Sum_probs=140.7

Q ss_pred             CHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 019158          157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFN  236 (345)
Q Consensus       157 ~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl  236 (345)
                      ...++.|+..|+++.++ .|+....+ +                         ...+..|.||||.|+..|+.+++++|+
T Consensus        41 ~t~l~~A~~~g~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll   93 (299)
T 1s70_B           41 GAVFLAACSSGDTEEVL-RLLERGAD-I-------------------------NYANVDGLTALHQACIDDNVDMVKFLV   93 (299)
T ss_dssp             HHHHHHHHHHTCHHHHH-HHHHHCCC-T-------------------------TCBCTTCCBHHHHHHHTTCHHHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHH-HHHHcCCC-C-------------------------cccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            34578899999999998 87765443 1                         113346889999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCC-----------------------------------
Q 019158          237 SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATS-----------------------------------  275 (345)
Q Consensus       237 ~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~-----------------------------------  275 (345)
                      ++|++++..+ ..|+||||+|+      ++++|+++|++++..+.                                   
T Consensus        94 ~~ga~~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~  172 (299)
T 1s70_B           94 ENGANINQPD-NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKE  172 (299)
T ss_dssp             HTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhh
Confidence            9999999998 89999999886      67889999988876653                                   


Q ss_pred             -------------------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 019158          276 -------------------------KKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       276 -------------------------~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                                               .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus       173 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll  252 (299)
T 1s70_B          173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV  252 (299)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred             hhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHH
Confidence                                     4778899999999999999999999999999999999999999999999999999


Q ss_pred             HCCCCCCCCCCCCCC
Q 019158          331 RESANPFVVDEVMWK  345 (345)
Q Consensus       331 ~~Gad~n~~d~~G~T  345 (345)
                      ++|++++.+|..|+|
T Consensus       253 ~~gad~~~~d~~g~t  267 (299)
T 1s70_B          253 ENLCDMEAVNKVGQT  267 (299)
T ss_dssp             HTTCCTTCCCTTSCC
T ss_pred             HcCCCCCCcCCCCCC
Confidence            999999999999987

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=1.9e-26  Score=195.53  Aligned_cols=133  Identities=15%  Similarity=0.066  Sum_probs=115.3

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCCCCc-HHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSKKWL-PLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~G~T-pLh~Aa  285 (345)
                      ....|.||||.|+..|+.+++++|+++|++++..+ ..|+||||+|+     ++++|+++|++++.+|..|+| |||+|+
T Consensus         8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~   86 (156)
T 1bi7_B            8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPN-SYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAA   86 (156)
T ss_dssp             --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-SSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHH
T ss_pred             CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence            44568999999999999999999999999999999 99999999874     789999999999999999999 999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  146 (156)
T 1bi7_B           87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARID  146 (156)
T ss_dssp             HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------
T ss_pred             HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCc
Confidence            999999999999999999999999999999999999999999999999999999998875

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.93  E-value=4.9e-26  Score=208.49  Aligned_cols=169  Identities=18%  Similarity=0.082  Sum_probs=147.2

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +.|++.|+.+.++ .|+........           +            ...+..|.||||.|+
T Consensus         5 ~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~g~~~~~-----------~------------~~~~~~g~t~L~~A~   53 (282)
T 1oy3_D            5 VTEDGDTAL-------HLAVIHQHEPFLD-FLLGFSAGHEY-----------L------------DLQNDLGQTALHLAA   53 (282)
T ss_dssp             CCTTCCCHH-------HHHHHTTCHHHHH-HHHHHHTTSGG-----------G------------GCCCTTSCCHHHHHH
T ss_pred             cCCCCCcHH-------HHHHHcCCHHHHH-HHHhcCCCccc-----------c------------cccCCCCCCHHHHHH
Confidence            345677887       5588999999998 77754332110           0            224457999999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCC-----------------------------
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPH-----------------------------  269 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gad-----------------------------  269 (345)
                      ..|+.+++++|+++|++++.++ ..|+||||+|+      ++++|+++|++                             
T Consensus        54 ~~g~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (282)
T 1oy3_D           54 ILGEASTVEKLYAAGAGVLVAE-RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS  132 (282)
T ss_dssp             HHTCHHHHHHHHHTTCCSSCCC-TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------
T ss_pred             HcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcc
Confidence            9999999999999999999999 99999999986      78999988765                             


Q ss_pred             ------------------CccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHH
Q 019158          270 ------------------LATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKD-GLTALHKAIIGKKQAVTNYLL  330 (345)
Q Consensus       270 ------------------vn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~-G~TpLh~Aa~~g~~eiv~~LL  330 (345)
                                        ++..+..|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll  212 (282)
T 1oy3_D          133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLL  212 (282)
T ss_dssp             -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH
Confidence                              7788899999999999999999999999999999999854 999999999999999999999


Q ss_pred             HCCCCCCCCCCCCCC
Q 019158          331 RESANPFVVDEVMWK  345 (345)
Q Consensus       331 ~~Gad~n~~d~~G~T  345 (345)
                      ++|++++.+|..|+|
T Consensus       213 ~~gad~~~~d~~g~t  227 (282)
T 1oy3_D          213 KAGADPTARMYGGRT  227 (282)
T ss_dssp             HTTCCTTCCCTTSCC
T ss_pred             HcCCCCcccccCCCC
Confidence            999999999999987

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.93  E-value=2.1e-25  Score=195.12  Aligned_cols=159  Identities=14%  Similarity=0.085  Sum_probs=144.8

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|+..|+.+.++ .++...+..+.                         ..+..|.||||.|+..++.+++++|+++|
T Consensus         9 L~~A~~~g~~~~v~-~ll~~~~~~~~-------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g   62 (201)
T 3hra_A            9 LLEAANQRDTKKVK-EILQDTTYQVD-------------------------EVDTEGNTPLNIAVHNNDIEIAKALIDRG   62 (201)
T ss_dssp             HHHHHHTTCHHHHH-HHHTCTTCCTT-------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             HHHHHHhccHHHHH-HHHHcCCCCCC-------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            57799999999998 88877663332                         23346899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHH-hcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCC
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLN-KKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGL  311 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl-~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-adin~~d~~G~  311 (345)
                      ++++..+ ..|.||||+|+      ++++|+ ..+++++..+..|+||||+|+..|+.+++++|+++| ++++.+|..|+
T Consensus        63 ~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~  141 (201)
T 3hra_A           63 ADINLQN-SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY  141 (201)
T ss_dssp             CCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSC
T ss_pred             CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCC
Confidence            9999999 99999999986      678888 678899999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHHcCC-----HHHHHHHHHCCCCCCCCCCCCCC
Q 019158          312 TALHKAIIGKK-----QAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       312 TpLh~Aa~~g~-----~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+..++     .+++++|+++|++++.+|..|+|
T Consensus       142 t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  180 (201)
T 3hra_A          142 TALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT  180 (201)
T ss_dssp             CHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCC
Confidence            99999999998     99999999999999999999987

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.93  E-value=9.2e-26  Score=195.08  Aligned_cols=157  Identities=11%  Similarity=0.037  Sum_probs=144.2

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+++.++ .++...+..+.                         ..+..|.||||.|+..++.+++++|+++|
T Consensus         9 l~~A~~~g~~~~v~-~ll~~~~~~~~-------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g   62 (179)
T 3f6q_A            9 IFTQCREGNAVAVR-LWLDNTENDLN-------------------------QGDDHGFSPLHWACREGRSAVVEMLIMRG   62 (179)
T ss_dssp             HHHHHHHTCHHHHH-HHHHCTTSCTT-------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHH-HHHhcCccccc-------------------------ccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence            57899999999998 88876664332                         23446899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCH
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA  313 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~Tp  313 (345)
                      ++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        63 ~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp  141 (179)
T 3f6q_A           63 ARINVMN-RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMP  141 (179)
T ss_dssp             CCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCG
T ss_pred             CCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCc
Confidence            9999999 99999999997      6899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 019158          314 LHKAIIGKKQAVTNYLLRESANPFVVDEVM  343 (345)
Q Consensus       314 Lh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G  343 (345)
                      ||+|+..++.+++++|+++|++++..+..+
T Consensus       142 l~~A~~~~~~~~~~~L~~~g~~~~~~~~~~  171 (179)
T 3f6q_A          142 VDKAKAPLRELLRERAEKMGQNLNRIPYKD  171 (179)
T ss_dssp             GGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence            999999999999999999999999877654

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.93  E-value=2.2e-25  Score=199.82  Aligned_cols=133  Identities=15%  Similarity=0.080  Sum_probs=120.5

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCC----CCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC-CCCCcH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNY----DPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT-SKKWLP  280 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~ga----din~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-~~G~Tp  280 (345)
                      .+..|.||+|.|+..++.+++++|++.+.    +++..+ ..|.||||+|+      ++++|+++|++++..+ ..|+||
T Consensus        75 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~  153 (241)
T 1k1a_A           75 LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN-YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSP  153 (241)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC-cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcH
Confidence            45568889988888889999999888877    788888 88999999886      6799999999999988 789999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       154 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  218 (241)
T 1k1a_A          154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT  218 (241)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999987

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.93  E-value=4.1e-25  Score=196.36  Aligned_cols=165  Identities=16%  Similarity=0.066  Sum_probs=131.8

Q ss_pred             hhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHh
Q 019158          146 KKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYG  225 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~  225 (345)
                      ...|.+|+       +.|++.|+.+.++ .|+..... +                         ...+..|.||||.|+.
T Consensus        22 d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~~   67 (223)
T 2f8y_A           22 DRTGETAL-------HLAARYSRSDAAK-RLLEASAD-A-------------------------NIQDNMGRTPLHAAVS   67 (223)
T ss_dssp             TTTCCCHH-------HHHHHTTCHHHHH-HHHHTTCC-T-------------------------TCCCTTSCCHHHHHHH
T ss_pred             CCCCCchH-------HHHHHcCCHHHHH-HHHHcCCC-C-------------------------CCcCCCCCCHHHHHHH
Confidence            45666766       5588899998887 66654322 1                         1133457888888888


Q ss_pred             CCcHHHHHHHHhCCC-CCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 019158          226 RGLDDVSEFFNSGNY-DPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLK  298 (345)
Q Consensus       226 ~~~~evvklLl~~ga-din~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~  298 (345)
                      .++.+++++|++.+. +++..+ ..|.||||+|+      ++++|+++|++++..+..|+||||+|+..|+.+++++|++
T Consensus        68 ~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  146 (223)
T 2f8y_A           68 ADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK  146 (223)
T ss_dssp             TTCHHHHHHHHHBTTSCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCcccCC-CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence            888888888888876 788888 88888888876      5788888888888888888888888888888888888888


Q ss_pred             CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          299 HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       299 ~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       147 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  193 (223)
T 2f8y_A          147 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL  193 (223)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCC
Confidence            88888888888888888888888888888888888888888888876

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.93  E-value=4.6e-25  Score=197.82  Aligned_cols=174  Identities=17%  Similarity=0.158  Sum_probs=151.5

Q ss_pred             HhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCC
Q 019158          137 IEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       137 le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ++.+... .....|.+|+       +.|+..|+.+.++ .|+..... +                         ......
T Consensus        31 l~~g~~~~~~~~~g~t~L-------~~A~~~~~~~~v~-~Ll~~g~~-~-------------------------~~~~~~   76 (237)
T 3b7b_A           31 VQAGANIDTCSEDQRTPL-------MEAAENNHLEAVK-YLIKAGAL-V-------------------------DPKDAE   76 (237)
T ss_dssp             HHTTCCTTCCCTTCCCHH-------HHHHHTTCHHHHH-HHHTTTCC-C-------------------------CCCCTT
T ss_pred             HHcCCCcCccCCCCCCHH-------HHHHHhCCHHHHH-HHHhCCCC-C-------------------------CCCCCC
Confidence            4455555 4455677776       5588899988887 65543221 1                         123446


Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCC-CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGN-YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~g-adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      |.||||.|+..++.+++++|++.| .+++..+ ..|.||||+|+      ++++|+++|++++.++..|.||||+|+..|
T Consensus        77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  155 (237)
T 3b7b_A           77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG  155 (237)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence            899999999999999999999998 8999999 99999999986      689999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t  212 (237)
T 3b7b_A          156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGET  212 (237)
T ss_dssp             CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999987

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.93  E-value=3.6e-25  Score=208.36  Aligned_cols=185  Identities=17%  Similarity=0.161  Sum_probs=131.8

Q ss_pred             CHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc----------cccCcccccCCCCCCCCCCCCCCcHHHHHHhC
Q 019158          157 DLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED----------RDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR  226 (345)
Q Consensus       157 ~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~----------~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~  226 (345)
                      ...++.|+..|+.+.++ .|+..... +........++          +.+++.  +.........+..|.||||.|+..
T Consensus        59 ~t~L~~A~~~g~~~~v~-~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~L--l~~g~~~~~~~~~g~t~L~~A~~~  134 (351)
T 3utm_A           59 STPLHLAAGYNRVRIVQ-LLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELL--LKHGACVNAMDLWQFTPLHEAASK  134 (351)
T ss_dssp             CCHHHHHHHTTCHHHHH-HHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHH--HHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CCHHHHHHHcCCHHHHH-HHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHH--HHCCCCCCCCCCCCCCHHHHHHHc
Confidence            34677788888888886 66654332 22111111111          111111  122222233445566666666666


Q ss_pred             CcHHHHHHHHhCCCCCCCCC-----------------------------------------------------CCCCCCc
Q 019158          227 GLDDVSEFFNSGNYDPPDKK-----------------------------------------------------SDGPRRK  253 (345)
Q Consensus       227 ~~~evvklLl~~gadin~~d-----------------------------------------------------~~~G~Tp  253 (345)
                      ++.+++++|+++|++++..+                                                     ...|.||
T Consensus       135 ~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~  214 (351)
T 3utm_A          135 NRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETA  214 (351)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH
T ss_pred             CCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH
Confidence            66666666666666655433                                                     0234455


Q ss_pred             chHHH---------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHH
Q 019158          254 LFTKE---------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQA  324 (345)
Q Consensus       254 Lh~Aa---------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~e  324 (345)
                      ||+|+         ++++|+.+|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus       215 L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~  294 (351)
T 3utm_A          215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ  294 (351)
T ss_dssp             HHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence            55543         457788888889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCC
Q 019158          325 VTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       325 iv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++++|+++|++++.+|..|+|
T Consensus       295 ~v~~Ll~~gad~~~~~~~g~t  315 (351)
T 3utm_A          295 TCRLLLSYGSDPSIISLQGFT  315 (351)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHcCCCCCCcCCCCCC
Confidence            999999999999999999987

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.93  E-value=2.6e-25  Score=188.25  Aligned_cols=148  Identities=18%  Similarity=0.141  Sum_probs=132.4

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+.+.++ .|+..... +                         ...+..|.||||.|+. ++.+++++|+++
T Consensus         8 ~L~~A~~~g~~~~v~-~Ll~~~~~-~-------------------------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~   59 (162)
T 1ihb_A            8 ELASAAARGDLEQLT-SLLQNNVN-V-------------------------NAQNGFGRTALQVMKL-GNPEIARRLLLR   59 (162)
T ss_dssp             HHHHHHHHTCHHHHH-HHTTSCCC-T-------------------------TCCCTTSCCHHHHCCS-SCHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHH-HHHhCCCC-c-------------------------cccCccCccHHHHHHc-CcHHHHHHHHHc
Confidence            468899999999998 77754322 1                         2234468999999999 999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CcccCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD-INAVDKDGL  311 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-in~~d~~G~  311 (345)
                      |++++.++ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.
T Consensus        60 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~  138 (162)
T 1ihb_A           60 GANPDLKD-RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD  138 (162)
T ss_dssp             TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred             CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence            99999999 99999999987      68999999999999999999999999999999999999999988 699999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      ||||+|+..|+.+++++|+++|||
T Consensus       139 t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          139 TACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             cHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999999999999986

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.93  E-value=2.8e-25  Score=198.87  Aligned_cols=159  Identities=18%  Similarity=0.096  Sum_probs=141.5

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+.+.++ .|+...+..+                         ...+..|.||||.|+..|+.+++++|++.|
T Consensus         7 L~~A~~~g~~~~v~-~Ll~~~g~~~-------------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~   60 (232)
T 2rfa_A            7 LLLAAKENDVQALS-KLLKFEGCEV-------------------------HQRGAMGETALHIAALYDNLEAAMVLMEAA   60 (232)
T ss_dssp             HHHHHHTTCHHHHH-HHHTTTCSCT-------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             HHHHHHcCCHHHHH-HHHHhcCCCc-------------------------ccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            46699999999998 7776544322                         223457999999999999999999999999


Q ss_pred             CCC-----CCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCC-------------CCCcHHHHHHHcCCHHHHHH
Q 019158          240 YDP-----PDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATS-------------KKWLPLHSLAASGEFYFVDA  295 (345)
Q Consensus       240 adi-----n~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~-------------~G~TpLh~Aa~~g~~eiv~~  295 (345)
                      +++     +..+ ..|.||||+|+      ++++|+++|++++..+.             .|+||||+|+..|+.+++++
T Consensus        61 ~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  139 (232)
T 2rfa_A           61 PELVFEPMTSEL-YEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRL  139 (232)
T ss_dssp             GGGGGCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHH
T ss_pred             chhccccccccC-CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHH
Confidence            887     6677 89999999997      78999999999998876             79999999999999999999


Q ss_pred             HHhCCCCCcccCCCCCCHHHHHHHcCCHHHH----HHHHHCCCCC------CCCCCCCCC
Q 019158          296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVT----NYLLRESANP------FVVDEVMWK  345 (345)
Q Consensus       296 LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv----~~LL~~Gad~------n~~d~~G~T  345 (345)
                      |+++|++++.+|..|+||||+|+..|+.+++    ++|+++|+++      +.+|..|+|
T Consensus       140 Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~t  199 (232)
T 2rfa_A          140 LIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLT  199 (232)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCC
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCC
Confidence            9999999999999999999999999999988    9999999998      588999987

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.93  E-value=2.5e-25  Score=194.23  Aligned_cols=133  Identities=17%  Similarity=0.047  Sum_probs=127.6

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..|.||||.|+..|+.+++++|++.|++++..+ ..|+||||+|+      ++++|+++|++++..|..|+||||+|+
T Consensus        31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  109 (192)
T 2rfm_A           31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI  109 (192)
T ss_dssp             CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            45579999999999999999999999999999999 99999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  169 (192)
T 2rfm_A          110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT  169 (192)
T ss_dssp             HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCB
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999986

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.93  E-value=6.2e-25  Score=188.35  Aligned_cols=133  Identities=21%  Similarity=0.186  Sum_probs=125.0

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      ....+.++++.|+..|+.+++++|+++|++++.++ ..|.||||+|+      ++++|+++|++++..|..|+||||+|+
T Consensus        10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   88 (169)
T 2y1l_E           10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAED-ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA   88 (169)
T ss_dssp             ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence            34457788999999999999999999999999999 99999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  148 (169)
T 2y1l_E           89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKT  148 (169)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999987

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.93  E-value=5.4e-25  Score=187.66  Aligned_cols=130  Identities=16%  Similarity=0.071  Sum_probs=114.1

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      .|.||||.|+..|+.+++++|++.|++++.++ ..|.||||+|+      ++++|+++|++++..+..|+||||+|+..|
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTD-EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG   80 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence            36788888888888999998888888888888 88889999886      678888888888888888899999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  137 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN  137 (167)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            999999999888888888888999999999999999999999999998888888876

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.92  E-value=6.6e-25  Score=195.38  Aligned_cols=159  Identities=17%  Similarity=0.124  Sum_probs=143.8

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+.+.++ .|+...+....                         ..+..|.||||.|+..|+.+++++|++.|
T Consensus         6 L~~A~~~g~~~~v~-~Ll~~~~~~~~-------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~   59 (228)
T 2dzn_A            6 LHQACMENEFFKVQ-ELLHSKPSLLL-------------------------QKDQDGRIPLHWSVSFQAHEITSFLLSKM   59 (228)
T ss_dssp             HHHHHHTTCHHHHH-HHHHHCGGGTT-------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             HHHHHHhCCHHHHH-HHHhcCccccc-------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            47799999999998 88877654332                         13456899999999999999999999999


Q ss_pred             --CCCCC-CCCCCCCCcchHHH------HHHHHHhcC--CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC
Q 019158          240 --YDPPD-KKSDGPRRKLFTKE------EKVLLNKKL--PHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDK  308 (345)
Q Consensus       240 --adin~-~d~~~G~TpLh~Aa------i~~lLl~~g--advn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~  308 (345)
                        .+++. .+ ..|.||||+|+      ++++|+++|  ++++..+..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus        60 ~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~  138 (228)
T 2dzn_A           60 ENVNLDDYPD-DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK  138 (228)
T ss_dssp             TTCCGGGCCC-TTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             ccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC
Confidence              55555 67 89999999997      689999999  89999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCC
Q 019158          309 DGLTALHKAIIGKKQAVTNYLLRES-ANPFVVDEVMWK  345 (345)
Q Consensus       309 ~G~TpLh~Aa~~g~~eiv~~LL~~G-ad~n~~d~~G~T  345 (345)
                      .|+||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus       139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t  176 (228)
T 2dzn_A          139 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT  176 (228)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC
Confidence            9999999999999999999999999 999999999987

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.92  E-value=1.8e-24  Score=185.46  Aligned_cols=148  Identities=20%  Similarity=0.161  Sum_probs=133.9

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHh
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNS  237 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~  237 (345)
                      ..++.|++.|+.+.++ .|+....+ +                         ...+..|.||||.|+..++.+++++|++
T Consensus        16 ~~l~~A~~~g~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~   68 (169)
T 2y1l_E           16 KKLLEAARAGRDDEVR-ILMANGAD-V-------------------------NAEDASGWTPLHLAAFNGHLEIVEVLLK   68 (169)
T ss_dssp             HHHHHHHHHTCHHHHH-HHHHTTCC-T-------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             chHHHHHHcCCHHHHH-HHHHCCCC-C-------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            3578899999999998 77765332 1                         1234468999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL  311 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~  311 (345)
                      +|++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        69 ~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~  147 (169)
T 2y1l_E           69 NGADVNAVD-HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK  147 (169)
T ss_dssp             TTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             cCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence            999999999 99999999997      68999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      ||||+|+..|+.+++++|++.|
T Consensus       148 t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          148 TAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHhCCHHHHHHHHHcC
Confidence            9999999999999999999876

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.92  E-value=2e-24  Score=193.67  Aligned_cols=166  Identities=15%  Similarity=0.088  Sum_probs=148.1

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +.|++.|+.+.++ .|+..... +                         ......|.||||.|+
T Consensus         7 ~~~~g~t~L-------~~A~~~g~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~   52 (237)
T 3b7b_A            7 EHQNKRSPL-------HAAAEAGHVDICH-MLVQAGAN-I-------------------------DTCSEDQRTPLMEAA   52 (237)
T ss_dssp             SSCCSCCHH-------HHHHHHTCHHHHH-HHHHTTCC-T-------------------------TCCCTTCCCHHHHHH
T ss_pred             ccCCCCCHH-------HHHHHcCcHHHHH-HHHHcCCC-c-------------------------CccCCCCCCHHHHHH
Confidence            344566676       6688999999997 76665332 1                         123346899999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKL-PHLATATSKKWLPLHSLAASGEFYFVDALL  297 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~g-advn~~d~~G~TpLh~Aa~~g~~eiv~~LL  297 (345)
                      ..|+.+++++|+++|++++..+ ..|.||||+|+      ++++|+++| ++++..+..|+||||+|+..|+.+++++|+
T Consensus        53 ~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll  131 (237)
T 3b7b_A           53 ENNHLEAVKYLIKAGALVDPKD-AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLL  131 (237)
T ss_dssp             HTTCHHHHHHHHTTTCCCCCCC-TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HhCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            9999999999999999999999 99999999986      689999998 899999999999999999999999999999


Q ss_pred             hCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          298 KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       298 ~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       132 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t  179 (237)
T 3b7b_A          132 SKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS  179 (237)
T ss_dssp             HTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred             HCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            999999999999999999999999999999999999999999999987

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=6.9e-25  Score=181.65  Aligned_cols=124  Identities=15%  Similarity=0.076  Sum_probs=118.7

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCC-CCcHHHHH
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSK-KWLPLHSL  284 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~-G~TpLh~A  284 (345)
                      ..+..|.||||.|+..++.+++++|+++|++++.++ ..|+||||+|+     ++++|+++|++++.+|.. |+||||+|
T Consensus         7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A   85 (136)
T 1d9s_A            7 MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALN-RFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDA   85 (136)
T ss_dssp             CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCTTTTTSTTSCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred             CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcC-CCCCCHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence            355679999999999999999999999999999999 99999999885     789999999999999999 99999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      +..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|||
T Consensus        86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           86 AREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999986

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.92  E-value=4.7e-25  Score=187.67  Aligned_cols=149  Identities=21%  Similarity=0.193  Sum_probs=131.8

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHh
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNS  237 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~  237 (345)
                      ..++.|++.|+++.++ .|+...+...                         ......|.||||.|+..++.+++++|++
T Consensus        10 ~~l~~A~~~g~~~~v~-~ll~~~~~~~-------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~   63 (165)
T 3twr_A           10 RQLLEAAKAGDVETVK-KLCTVQSVNC-------------------------RDIEGRQSTPLHFAAGYNRVSVVEYLLQ   63 (165)
T ss_dssp             HHHHHHHHHTCHHHHH-HHCCTTTTTC-------------------------CCTTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHhCCHHHHH-HHHHcCCCCc-------------------------cccccCCCCHHHHHHHcChHHHHHHHHh
Confidence            3468899999999998 7776544222                         1234458899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL  311 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~  311 (345)
                      +|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        64 ~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  142 (165)
T 3twr_A           64 HGADVHAKD-KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN  142 (165)
T ss_dssp             TTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             cCCCCCccC-CCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence            999999999 99999999997      68999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRESA  334 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~Ga  334 (345)
                      ||||+|+. |+.+++++|+++||
T Consensus       143 t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          143 TPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             CTGGGSCT-TCHHHHHHHHTC--
T ss_pred             ChhHhHhc-CChHHHHHHhhccc
Confidence            99999877 89999999999886

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.92  E-value=2.1e-24  Score=201.04  Aligned_cols=172  Identities=15%  Similarity=0.055  Sum_probs=149.8

Q ss_pred             HhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCC
Q 019158          137 IEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       137 le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ++.+... .+...|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..
T Consensus        79 l~~g~~~~~~~~~g~t~L-------~~A~~~g~~~~v~-~Ll~~ga~-~-------------------------~~~~~~  124 (285)
T 3d9h_A           79 ISQGWAVNIITADHVSPL-------HEACLGGHLSCVK-ILLKHGAQ-V-------------------------NGVTAD  124 (285)
T ss_dssp             HHTTCCSCEECTTCCCHH-------HHHHHTTCHHHHH-HHHHTTCC-S-------------------------SCCCTT
T ss_pred             HHCCCCCCCcCCCCCCHH-------HHHHHCCcHHHHH-HHHHCCCC-C-------------------------CCCCCC
Confidence            4455555 5566788887       5588899999987 66654221 1                         224456


Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      |.|||+.|+..++.+++++|+++|++++..+  .|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+
T Consensus       125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~  202 (285)
T 3d9h_A          125 WHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ  202 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred             CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            8999999999999999999999999998765  5999999986      6899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|+++|++++. |..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       203 ~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t  257 (285)
T 3d9h_A          203 RACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKR  257 (285)
T ss_dssp             HHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            9999999999999995 899999999999999999999999999999999999987

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.92  E-value=1e-24  Score=185.92  Aligned_cols=149  Identities=13%  Similarity=0.036  Sum_probs=135.2

Q ss_pred             HHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCC
Q 019158          161 YLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNY  240 (345)
Q Consensus       161 ~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~ga  240 (345)
                      +.|++.|+.+.++ .|+..... +                         ...+..|.||||.|+..++.+++++|+++|+
T Consensus         8 ~~A~~~g~~~~v~-~ll~~~~~-~-------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   60 (167)
T 3v31_A            8 HQLAAQGEMLYLA-TRIEQENV-I-------------------------NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA   60 (167)
T ss_dssp             HHHHHTTCHHHHH-HHHHHSSC-T-------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHCCCHHHHH-HHHHcCCC-c-------------------------CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence            6689999999998 77765432 2                         2234468999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHH
Q 019158          241 DPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTAL  314 (345)
Q Consensus       241 din~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpL  314 (345)
                      +++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus        61 ~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l  139 (167)
T 3v31_A           61 DPQLLG-KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSM  139 (167)
T ss_dssp             CTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             CCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            999999 99999999987      68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCC
Q 019158          315 HKAIIGKKQAVTNYLLRESANPF  337 (345)
Q Consensus       315 h~Aa~~g~~eiv~~LL~~Gad~n  337 (345)
                      |+|+..|+.+++++|+++++++.
T Consensus       140 ~~A~~~~~~~~~~~L~~~~~~~~  162 (167)
T 3v31_A          140 DLAVALGYRSVQQVIESHLLKLL  162 (167)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHC
T ss_pred             HHHHHcCcHHHHHHHHHHHHHHH
Confidence            99999999999999999887653

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=2.2e-24  Score=211.10  Aligned_cols=135  Identities=21%  Similarity=0.217  Sum_probs=129.3

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHH
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHS  283 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~  283 (345)
                      ......|.||||.|+..|+.+++++|+++|++++..+ ..|.||||+|+      ++++|+++|++++.++..|+||||+
T Consensus       239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~  317 (437)
T 1n11_A          239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN-KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHV  317 (437)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHH
T ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHH
Confidence            4456679999999999999999999999999999999 99999999987      6899999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          284 LAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       284 Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t  379 (437)
T 1n11_A          318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT  379 (437)
T ss_dssp             HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCC
T ss_pred             HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999987

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.92  E-value=1.5e-24  Score=189.32  Aligned_cols=154  Identities=18%  Similarity=0.100  Sum_probs=137.9

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..|.||||.|+
T Consensus        31 ~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~~~~-~-------------------------~~~~~~g~t~L~~A~   76 (192)
T 2rfm_A           31 RDSYNRTPL-------MVACMLGMENAID-KLVENFDK-L-------------------------EDKDIEGSTALIWAV   76 (192)
T ss_dssp             CCTTCCCHH-------HHHHHHTCGGGHH-HHHHHHCC-T-------------------------TCCCTTSCCHHHHHH
T ss_pred             cCCCCCCHH-------HHHHHcCCHHHHH-HHHHhccc-c-------------------------ccccccCccHHHHHH
Confidence            456777887       5588999999998 77765332 1                         123446899999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLK  298 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~  298 (345)
                      ..++.+++++|+++|++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus        77 ~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  155 (192)
T 2rfm_A           77 KNNRLGIAEKLLSKGSNVNTKD-FSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE  155 (192)
T ss_dssp             HTTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            9999999999999999999999 99999999997      6899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          299 HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       299 ~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      +|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus       156 ~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          156 LGADISARDLTGLTAEASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence            99999999999999999999999999999999875

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.92  E-value=1.9e-24  Score=182.10  Aligned_cols=127  Identities=23%  Similarity=0.179  Sum_probs=115.1

Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEF  290 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~  290 (345)
                      .++|+.|+..|+.+++++|++.|++++ .+ ..|.||||+|+      ++++|+++|++++..+..|+||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   80 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence            477888888899999999999998876 46 78999999886      67899999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          291 YFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       291 eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  135 (153)
T 1awc_B           81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT  135 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            9999999999999999999999999999999999999999999999999998886

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.92  E-value=4.9e-24  Score=179.59  Aligned_cols=142  Identities=16%  Similarity=0.090  Sum_probs=130.2

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+.+.++ .|+......                           ..+..|.||||.|+..|+.+++++|++.
T Consensus         5 ~L~~A~~~g~~~~v~-~Ll~~g~~~---------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   56 (153)
T 1awc_B            5 KLLEAARAGQDDEVR-ILMANGAPF---------------------------TTDWLGTSPLHLAAQYGHFSTTEVLLRA   56 (153)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHHTCCC---------------------------CCCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             HHHHHHHcCCHHHHH-HHHHcCCCC---------------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            478899999999998 777764421                           1234589999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |++++..+ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        57 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  135 (153)
T 1awc_B           57 GVSRDART-KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT  135 (153)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCCCC-CCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            99999999 99999999997      689999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHH
Q 019158          313 ALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~L  329 (345)
                      |||+|+..|+.+++++|
T Consensus       136 ~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          136 AFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHh
Confidence            99999999999999987

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.92  E-value=7.5e-25  Score=199.42  Aligned_cols=164  Identities=15%  Similarity=0.086  Sum_probs=140.1

Q ss_pred             HHHHHHHhCCccccCchhhh---cCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhC---CcHHHH
Q 019158          159 KEYLAYKEAKLSQLNPPLVL---DKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR---GLDDVS  232 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~---~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~---~~~evv  232 (345)
                      .++.|++.|+.+.++ .++.   .....+..          ..           ...+..|.||||.|+..   |+.+++
T Consensus         5 ~L~~A~~~g~~~~v~-~ll~~l~~~g~~i~~----------~~-----------~~~d~~g~t~L~~A~~~~~~g~~~~v   62 (256)
T 2etb_A            5 RLFSVVSRGVPEELT-GLLEYLRWNSKYLTD----------SA-----------YTEGSTGKTCLMKAVLNLQDGVNACI   62 (256)
T ss_dssp             HHHHHHHHTCGGGGT-THHHHHHHHTCCTTS----------GG-----------GSBTTTTBCHHHHHHHTCBTTBCTTH
T ss_pred             HHHHHHHcCCHHHHH-HHHHHHHHcCCCccc----------cc-----------ccCCCCCCCHHHHHHHccccchHHHH
Confidence            357799999999887 6665   22222210          00           11355799999999999   999999


Q ss_pred             HHHHhCCCCCCC-----------CCCCCCCCcchHHH------HHHHHHhcCCCCccCCCC-------------CCcHHH
Q 019158          233 EFFNSGNYDPPD-----------KKSDGPRRKLFTKE------EKVLLNKKLPHLATATSK-------------KWLPLH  282 (345)
Q Consensus       233 klLl~~gadin~-----------~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~-------------G~TpLh  282 (345)
                      ++|++.|++++.           .+ ..|.||||+|+      ++++|+++|++++.++..             |+||||
T Consensus        63 ~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~  141 (256)
T 2etb_A           63 MPLLQIDKDSGNPKPLVNAQCTDEF-YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLS  141 (256)
T ss_dssp             HHHHHHHHHTTCSSCGGGCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHH
T ss_pred             HHHHhcCCcccchhhhccccccccc-ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHH
Confidence            999999987762           34 67999999997      789999999999999886             999999


Q ss_pred             HHHHcCCHHHHHHHHh---CCCCCcccCCCCCCHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CCCCCCC
Q 019158          283 SLAASGEFYFVDALLK---HNVDINAVDKDGLTALHKAII--GKKQA-------VTNYLLRESANP-------FVVDEVM  343 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~---~Gadin~~d~~G~TpLh~Aa~--~g~~e-------iv~~LL~~Gad~-------n~~d~~G  343 (345)
                      +|+..|+.+++++|++   +|++++.+|..|+||||+|+.  .++.+       ++++|+++|+++       +.+|..|
T Consensus       142 ~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g  221 (256)
T 2etb_A          142 LAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQG  221 (256)
T ss_dssp             HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTS
T ss_pred             HHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCC
Confidence            9999999999999999   999999999999999999999  88888       999999999999       8999999


Q ss_pred             CC
Q 019158          344 WK  345 (345)
Q Consensus       344 ~T  345 (345)
                      +|
T Consensus       222 ~t  223 (256)
T 2etb_A          222 LT  223 (256)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.91  E-value=8.4e-24  Score=187.83  Aligned_cols=132  Identities=18%  Similarity=0.103  Sum_probs=126.7

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCC-CCccCCCCCCcHHHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLP-HLATATSKKWLPLHSLA  285 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~ga-dvn~~d~~G~TpLh~Aa  285 (345)
                      +..|.||||.|+..|+.+++++|+++|++++..+ ..|+||||+|+      ++++|+++++ +++..+..|+||||+|+
T Consensus        22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~  100 (223)
T 2f8y_A           22 DRTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA  100 (223)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred             CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence            4579999999999999999999999999999999 99999999997      6899999987 89999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  160 (223)
T 2f8y_A          101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET  160 (223)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999987

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.91  E-value=2.7e-24  Score=182.96  Aligned_cols=132  Identities=17%  Similarity=0.157  Sum_probs=124.1

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHh-CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNS-GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~-~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      +..+.|+|+.|+..|+.++++.|++ .+.+++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   83 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC   83 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence            3457899999999999999999998 566788888 89999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  143 (165)
T 3twr_A           84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT  143 (165)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999987

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.91  E-value=4.6e-24  Score=184.39  Aligned_cols=130  Identities=19%  Similarity=0.132  Sum_probs=122.0

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      .+.++|+.|+..|+.+++++|++. +.+++..+ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   82 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH   82 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            356779999999999999999988 67899999 99999999987      68999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  140 (179)
T 3f6q_A           83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEM  140 (179)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCC
T ss_pred             CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCC
Confidence            9999999999999999999999999999999999999999999999999999999987

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.91  E-value=6.4e-24  Score=197.73  Aligned_cols=175  Identities=16%  Similarity=0.064  Sum_probs=97.4

Q ss_pred             hhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHh
Q 019158          146 KKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYG  225 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~  225 (345)
                      ...|.+++|       .|+..|+...+. +++...|..+....              +..... ...+..|+||||.|+.
T Consensus        12 ~~~~~~~lH-------~Aa~~g~~~~~~-~~~~~~~~~~~~~~--------------l~~~~~-~~~~~~g~t~L~~Aa~   68 (285)
T 3d9h_A           12 SGLVPRGSH-------MASMDGKQGGMD-GSKPAGPRDFPGIR--------------LLSNPL-MGDAVSDWSPMHEAAI   68 (285)
T ss_dssp             --------------------------------------CCSEE--------------CCCCTT-CSSSCCSCCHHHHHHH
T ss_pred             chHHHHHHH-------HHhhcCCCCCcc-cCCCCccccccchh--------------hhhCcc-cCCCccCCCHHHHHHH
Confidence            345556664       477899988887 76655554332100              011111 3455567777777777


Q ss_pred             CCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 019158          226 RGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH  299 (345)
Q Consensus       226 ~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~  299 (345)
                      .|+.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus        69 ~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  147 (285)
T 3d9h_A           69 HGHQLSLRNLISQGWAVNIIT-ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH  147 (285)
T ss_dssp             TTCHHHHHHHHHTTCCSCEEC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC
Confidence            777777777777777777777 77777777775      56777777777777777777777777777777777777777


Q ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          300 NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       300 Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       148 g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t  192 (285)
T 3d9h_A          148 GASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT  192 (285)
T ss_dssp             TCCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBC
T ss_pred             CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            7776643 34677777777777777777777777777777666655

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.91  E-value=4.5e-24  Score=182.82  Aligned_cols=129  Identities=17%  Similarity=0.071  Sum_probs=122.2

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCC-CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYD-PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gad-in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      +.+|||.|+..|+.++++.|++.+.+ ++..+ ..|+||||+|+      ++++|+++|++++..+..|+||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG   80 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence            45779999999999999999999887 88889 99999999997      689999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  137 (172)
T 3v30_A           81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT  137 (172)
T ss_dssp             CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999987

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.91  E-value=8.5e-24  Score=177.99  Aligned_cols=145  Identities=14%  Similarity=0.081  Sum_probs=130.7

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+.+.++ .++...+..+                         ...+..|.||||. +..++.+++++|+++
T Consensus         5 ~L~~A~~~g~~~~v~-~ll~~~~~~~-------------------------~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~   57 (156)
T 1bd8_A            5 RLSGAAARGDVQEVR-RLLHRELVHP-------------------------DALNRFGKTALQV-MMFGSTAIALELLKQ   57 (156)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHTTCCCT-------------------------TCCCTTSCCHHHH-SCTTCHHHHHHHHHT
T ss_pred             HHHHHHHhCCHHHHH-HHHHhhCcCc-------------------------cccCCCCCcHHHH-HHcCCHHHHHHHHHC
Confidence            467899999999998 8877622112                         2234469999999 888999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |++++.++ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.|
T Consensus        58 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t  135 (156)
T 1bd8_A           58 GASPNVQD-TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLT  135 (156)
T ss_dssp             TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCC
T ss_pred             CCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCC
Confidence            99999999 99999999997      68999999999999999999999999999999999999999 999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHC
Q 019158          313 ALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~  332 (345)
                      |||+|+..|+.+++++|+++
T Consensus       136 ~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          136 PLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHcCcHHHHHHHHhh
Confidence            99999999999999999975

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.91  E-value=5.7e-24  Score=171.48  Aligned_cols=120  Identities=26%  Similarity=0.275  Sum_probs=116.0

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      +|.|||+.|+..++.+++++|+++|++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence            48899999999999999999999999999999 99999999986      689999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|||
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999986

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.91  E-value=2.1e-24  Score=196.66  Aligned_cols=164  Identities=15%  Similarity=0.058  Sum_probs=139.2

Q ss_pred             HHHHHHHhCCccccCchhhh---cCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH---hCCcHHHH
Q 019158          159 KEYLAYKEAKLSQLNPPLVL---DKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY---GRGLDDVS  232 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~---~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~---~~~~~evv  232 (345)
                      .++.|++.|+.+.++ .++.   .....+..        .  .           ......|.||||.|+   ..|+.+++
T Consensus         8 ~L~~A~~~g~~~~v~-~ll~~l~~~~~~~~~--------~--~-----------~~~~~~g~t~L~~A~~~~~~g~~~~v   65 (260)
T 3jxi_A            8 ILFDIVSRGSPDGLE-GLLSFLLTHKKRLTD--------E--E-----------FREPSTGKTCLPKALLNLSAGRNDTI   65 (260)
T ss_dssp             HHHHHHHHTCGGGGT-THHHHHHHHTCCTTS--------G--G-----------GSCTTTCCCHHHHHHTSCBTTBCTHH
T ss_pred             HHHHHHHhCCHHHHH-HHHHHHHhcCCCcch--------h--h-----------hhccCCCCcHHHHHHHHhhcCCHHHH
Confidence            468899999999998 8876   22222220        0  0           112356999999999   67999999


Q ss_pred             HHHHhCCCC-----------CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC--------------CCCCcHH
Q 019158          233 EFFNSGNYD-----------PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT--------------SKKWLPL  281 (345)
Q Consensus       233 klLl~~gad-----------in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d--------------~~G~TpL  281 (345)
                      ++|++.|++           ++..+ ..|+||||+|+      ++++|+++|++++..+              ..|+|||
T Consensus        66 ~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL  144 (260)
T 3jxi_A           66 PILLDIAEKTGNMREFINSPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPL  144 (260)
T ss_dssp             HHHHHHHHHTTCHHHHHTCCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHH
T ss_pred             HHHHHhcccccchHhhhcccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHH
Confidence            999998754           44445 58999999997      7899999999999998              6899999


Q ss_pred             HHHHHcCCHHHHHHHHh---CCCCCcccCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCCC-------CCCCCC
Q 019158          282 HSLAASGEFYFVDALLK---HNVDINAVDKDGLTALHKAIIGKK---------QAVTNYLLRESANP-------FVVDEV  342 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~---~Gadin~~d~~G~TpLh~Aa~~g~---------~eiv~~LL~~Gad~-------n~~d~~  342 (345)
                      |+|+..|+.+++++|++   +|++++.+|..|+||||+|+..++         .+++++|+++|+++       +.+|..
T Consensus       145 ~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~  224 (260)
T 3jxi_A          145 SLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNND  224 (260)
T ss_dssp             HHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred             HHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCC
Confidence            99999999999999999   999999999999999999999888         79999999999998       679999


Q ss_pred             CCC
Q 019158          343 MWK  345 (345)
Q Consensus       343 G~T  345 (345)
                      |+|
T Consensus       225 g~t  227 (260)
T 3jxi_A          225 GLS  227 (260)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            987

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.91  E-value=4.3e-24  Score=180.67  Aligned_cols=129  Identities=17%  Similarity=0.083  Sum_probs=123.7

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCH
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSKKWLPLHSLAASGEF  290 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~  290 (345)
                      ..|||+.|+..|+.+++++|+++|++++..+ ..|+||||+|+     ++++|+++|++++.++..|+||||+|+..|+.
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   83 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQNNVNVNAQN-GFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   83 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCC-TTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhCCCCccccC-ccCccHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            5688999999999999999999999999999 99999999875     78999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCC
Q 019158          291 YFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN-PFVVDEVMWK  345 (345)
Q Consensus       291 eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-~n~~d~~G~T  345 (345)
                      +++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus        84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t  139 (162)
T 1ihb_A           84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT  139 (162)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred             HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence            999999999999999999999999999999999999999999998 5999999987

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.91  E-value=1.4e-24  Score=199.73  Aligned_cols=171  Identities=17%  Similarity=0.115  Sum_probs=141.8

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhc---CCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLD---KPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKW  221 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~---~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~  221 (345)
                      .+..|.+|+       +.|++.|+++.++ .|+..   ....+.        +  ..           ...+..|.||||
T Consensus         9 ~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~~~~~~~~~~--------~--~~-----------~~~~~~g~tpL~   59 (273)
T 2pnn_A            9 PRLYDRRSI-------FDAVAQSNCQELE-SLLPFLQRSKKRLT--------D--SE-----------FKDPETGKTCLL   59 (273)
T ss_dssp             --CCCHHHH-------HHHHHTTCSSTTT-THHHHHHHSCCCTT--------S--GG-----------GSCTTTCCCHHH
T ss_pred             CCcccchHH-------HHHHHcCCHHHHH-HHHHHHhhcccccC--------C--cc-----------cccCcCCCCHHH
Confidence            344555555       7799999999998 88763   222111        0  00           123557999999


Q ss_pred             HHHhC---CcHHHHHHHHhCCCCC-------CC----CCCCCCCCcchHHH------HHHHHHhcCCCCccCCC------
Q 019158          222 AVYGR---GLDDVSEFFNSGNYDP-------PD----KKSDGPRRKLFTKE------EKVLLNKKLPHLATATS------  275 (345)
Q Consensus       222 aA~~~---~~~evvklLl~~gadi-------n~----~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~------  275 (345)
                      .|+..   |+.+++++|+++|+++       +.    .+ ..|+||||+|+      ++++|+++|++++.++.      
T Consensus        60 ~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~  138 (273)
T 2pnn_A           60 KAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSY-YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKK  138 (273)
T ss_dssp             HHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSS
T ss_pred             HHHHHHhcCChHHHHHHHHhhccccchhHHhhccccccc-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccc
Confidence            99976   9999999999998653       22    55 68999999997      78999999999999987      


Q ss_pred             --------CCCcHHHHHHHcCCHHHHHHHHh---CCCCCcccCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCC
Q 019158          276 --------KKWLPLHSLAASGEFYFVDALLK---HNVDINAVDKDGLTALHKAIIGKK---------QAVTNYLLRESAN  335 (345)
Q Consensus       276 --------~G~TpLh~Aa~~g~~eiv~~LL~---~Gadin~~d~~G~TpLh~Aa~~g~---------~eiv~~LL~~Gad  335 (345)
                              .|+||||+|+..|+.+++++|++   +|++++.+|..|+||||+|+..|+         .+++++|+++|++
T Consensus       139 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~  218 (273)
T 2pnn_A          139 TKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK  218 (273)
T ss_dssp             CSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence                    79999999999999999999999   999999999999999999999998         8999999999999


Q ss_pred             CC-------CCCCCCCC
Q 019158          336 PF-------VVDEVMWK  345 (345)
Q Consensus       336 ~n-------~~d~~G~T  345 (345)
                      ++       .+|..|+|
T Consensus       219 ~n~~~~~~~~~d~~g~T  235 (273)
T 2pnn_A          219 LHPTLKLEEITNRKGLT  235 (273)
T ss_dssp             HCTTCCGGGCCCTTSCC
T ss_pred             cccccccccccCCCCCC
Confidence            97       48999987

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.91  E-value=9e-24  Score=189.00  Aligned_cols=130  Identities=14%  Similarity=0.065  Sum_probs=123.0

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCC-----ccCCCCCCcHHH
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHL-----ATATSKKWLPLH  282 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadv-----n~~d~~G~TpLh  282 (345)
                      .|+||||.|+..|+.++++.|++. |++++.++ ..|+||||+|+      ++++|+++|+++     +..|..|+||||
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~   80 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRG-AMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH   80 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence            488999999999999999999998 99999999 99999999997      689999999987     677889999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCcccCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          283 SLAASGEFYFVDALLKHNVDINAVDK-------------DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadin~~d~-------------~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +|+..|+.+++++|+++|++++..+.             .|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  156 (232)
T 2rfa_A           81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT  156 (232)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            99999999999999999999998765             7999999999999999999999999999999999987

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.91  E-value=2e-24  Score=194.20  Aligned_cols=166  Identities=13%  Similarity=0.019  Sum_probs=141.8

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..|.||||.|+
T Consensus        41 ~~~~g~t~L-------~~A~~~~~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~   86 (236)
T 1ikn_D           41 QNNLQQTPL-------HLAVITNQPEIAE-ALLGAGCD-P-------------------------ELRDFRGNTPLHLAC   86 (236)
T ss_dssp             CCTTCCCHH-------HHHHHTTCHHHHH-CCCSCCCC-S-------------------------CCCCTTCCCHHHHHH
T ss_pred             cCCCCCCHH-------HHHHHcCCHHHHH-HHHHcCCC-C-------------------------CCcCCCCCCHHHHHH
Confidence            345567776       5588899988886 55433211 1                         223457999999999


Q ss_pred             hCCcHHHHHHHHhCCCC------CCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCC-CCCcHHHHHHHcCCHH
Q 019158          225 GRGLDDVSEFFNSGNYD------PPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATS-KKWLPLHSLAASGEFY  291 (345)
Q Consensus       225 ~~~~~evvklLl~~gad------in~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~-~G~TpLh~Aa~~g~~e  291 (345)
                      ..++.+++++|++.|++      ++..+ ..|.||||+|+      ++++|+++|++++.++. .|+||||+|+..|+.+
T Consensus        87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~  165 (236)
T 1ikn_D           87 EQGCLASVGVLTQSCTTPHLHSILKATN-YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD  165 (236)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCC-TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred             HcCCHHHHHHHHhcccchhHHHHhhccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            99999999999999976      46677 88999999997      78999999999999998 9999999999999999


Q ss_pred             HHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCC
Q 019158          292 FVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF--VVDEVMWK  345 (345)
Q Consensus       292 iv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n--~~d~~G~T  345 (345)
                      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++..  .++..|.|
T Consensus       166 ~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~  221 (236)
T 1ikn_D          166 LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE  221 (236)
T ss_dssp             HHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTT
T ss_pred             HHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHH
Confidence            9999999999999999999999999999999999999999999875  66776654

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.91  E-value=8.9e-24  Score=192.64  Aligned_cols=132  Identities=18%  Similarity=0.103  Sum_probs=127.0

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCC-CCccCCCCCCcHHHHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLP-HLATATSKKWLPLHSLA  285 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~ga-dvn~~d~~G~TpLh~Aa  285 (345)
                      +..|.||||.|+..|+.+++++|+++|++++..+ ..|+||||+|+      ++++|+++|+ +++..+..|+||||+|+
T Consensus        54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~  132 (253)
T 1yyh_A           54 DRTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA  132 (253)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence            4579999999999999999999999999999999 99999999997      6799999987 99999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  192 (253)
T 1yyh_A          133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET  192 (253)
T ss_dssp             HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999987

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.91  E-value=6.7e-24  Score=175.67  Aligned_cols=121  Identities=22%  Similarity=0.225  Sum_probs=114.1

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      ....+.||+|.|+..|+.+++++|+++|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~   88 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA   88 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence            44468899999999999999999999999999999 99999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999986

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.91  E-value=9.9e-24  Score=195.88  Aligned_cols=133  Identities=17%  Similarity=0.075  Sum_probs=126.9

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCC-CCCCCCCCCCCCcchHHH-----------HHHHHHhcCCCCccCCCCCCc
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNY-DPPDKKSDGPRRKLFTKE-----------EKVLLNKKLPHLATATSKKWL  279 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~ga-din~~d~~~G~TpLh~Aa-----------i~~lLl~~gadvn~~d~~G~T  279 (345)
                      .+..|.||||.|+..|+.+++++|++.|+ +++..+ ..|.||||+|+           ++++|+..|.+++..+..|+|
T Consensus       107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  185 (276)
T 4hbd_A          107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQT  185 (276)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCC
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCC
Confidence            44569999999999999999999999998 999999 99999999876           578999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       280 pLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      |||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+|
T Consensus       186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~T  252 (276)
T 4hbd_A          186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGST  252 (276)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999 89999999999987

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.91  E-value=2e-24  Score=206.69  Aligned_cols=208  Identities=13%  Similarity=0.059  Sum_probs=142.7

Q ss_pred             HHHHHHHHhhCHHHHHHHHHHHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc
Q 019158          116 WKQVQEELNLTKKEKRQIALQIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED  194 (345)
Q Consensus       116 ~~~~~~e~~~~kke~~~i~~~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~  194 (345)
                      |-.+...+..+..+..+.  .++.+... .+...|.+|+       +.|+..|+.+.++ .|+........   ....++
T Consensus        21 ~t~L~~Aa~~g~~~~v~~--Ll~~g~~~~~~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~g~~~~~---~~g~t~   87 (364)
T 3ljn_A           21 MEKIHVAARKGQTDEVRR--LIETGVSPTIQNRFGCTAL-------HLACKFGCVDTAK-YLASVGEVHSL---WHGQKP   87 (364)
T ss_dssp             HHHHHHHHHHTCHHHHHH--HHHTTCCTTCCCTTCCCHH-------HHHHHHCCHHHHH-HHHHHCCCCCC---BTTBCH
T ss_pred             CCHHHHHHHcCCHHHHHH--HHHcCCCccccCCCCCcHH-------HHHHHcCCHHHHH-HHHHCCCCccc---cCCCCH
Confidence            444444444444444333  34456665 4566788887       5588899999997 77666542111   111111


Q ss_pred             ----------cccCcccccCC----CCCCCC-----------------CCCCCCcHHHHHHhCC--cHHHHHHHHhCCCC
Q 019158          195 ----------RDCGFQDFVNS----SSSTCT-----------------QRVPPKNPKWAVYGRG--LDDVSEFFNSGNYD  241 (345)
Q Consensus       195 ----------~~~~f~~~v~~----~~~~~~-----------------~~~~g~tpL~aA~~~~--~~evvklLl~~gad  241 (345)
                                +.+++..  ..    ......                 .+..|.||||.|+..|  +.+++++|+++|++
T Consensus        88 L~~A~~~g~~~~v~~Ll--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~  165 (364)
T 3ljn_A           88 IHLAVMANKTDLVVALV--EGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS  165 (364)
T ss_dssp             HHHHHHTTCHHHHHHHH--HHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred             HHHHHHcCCHHHHHHHH--HhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence                      0111000  00    000011                 3446788888888888  88888888888888


Q ss_pred             CCCCCCCCCCCcchHHH------HHHHHHhcCCC-----CccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC
Q 019158          242 PPDKKSDGPRRKLFTKE------EKVLLNKKLPH-----LATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDG  310 (345)
Q Consensus       242 in~~d~~~G~TpLh~Aa------i~~lLl~~gad-----vn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G  310 (345)
                      ++..+ ..|+||||+|+      ++++|+++|++     ++..|..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus       166 ~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g  244 (364)
T 3ljn_A          166 PTAKD-KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEH  244 (364)
T ss_dssp             TTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred             CcccC-CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence            88888 88888888876      67888888887     88888888888888888888888888888888888888888


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 019158          311 LTALHKAIIGKKQAVTNYLLRESANPFVV  339 (345)
Q Consensus       311 ~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~  339 (345)
                      .||||+|+..|+.+++++|+++|++++..
T Consensus       245 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~  273 (364)
T 3ljn_A          245 TVPLYLSVRAAMVLLTKELLQKTDVFLIQ  273 (364)
T ss_dssp             CCHHHHHHHTCCHHHHHHHHHHSCHHHHH
T ss_pred             CCHHHHHHHhChHHHHHHHHHcCCchhhh
Confidence            88888888888888888888888776443

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.91  E-value=1.1e-24  Score=202.26  Aligned_cols=167  Identities=17%  Similarity=0.135  Sum_probs=134.0

Q ss_pred             HHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCC
Q 019158          136 QIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRV  214 (345)
Q Consensus       136 ~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~  214 (345)
                      .++.|..+ .+...|.+||       +.|+..|+.+.++ .|+......                          .....
T Consensus        72 Ll~~Gadvn~~d~~G~TpL-------h~A~~~g~~~~v~-~Ll~~~a~~--------------------------~~~~~  117 (269)
T 4b93_B           72 VPASGLGVNVTSQDGSSPL-------HVAALHGRADLIP-LLLKHGANA--------------------------GARNA  117 (269)
T ss_dssp             ---CCCCTTCCCTTSCCHH-------HHHHHTTCTTHHH-HHHHTTCCT--------------------------TCCCT
T ss_pred             HHHCCCCCCCcCCCCCCHH-------HHHHHcCcHHHHH-HHHhcCCCc--------------------------CccCC
Confidence            34556666 4567788887       4588899999997 666543321                          22345


Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      .|.||++.|+..++.+++++|++.|++++.+| ..|+||||+|+      ++++|+++|+++|.++..|+||||+||..|
T Consensus       118 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g  196 (269)
T 4b93_B          118 DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD-LSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEK  196 (269)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred             CCCCccccccccChHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC
Confidence            68999999999999999999999999999999 99999999997      689999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK-QAVTNYLLRESANPF  337 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~-~eiv~~LL~~Gad~n  337 (345)
                      +.++|++|+++|++++.+|..|+||||+|+.+++ .+++++|...++.++
T Consensus       197 ~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~  246 (269)
T 4b93_B          197 HVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD  246 (269)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred             CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence            9999999999999999999999999999998876 355555666665543

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.91  E-value=1.8e-23  Score=186.60  Aligned_cols=160  Identities=19%  Similarity=0.129  Sum_probs=148.1

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+++.++ .++...+..+.                         ..+..|.||||.|+..|+.+++++|++.
T Consensus         9 ~l~~A~~~g~~~~v~-~ll~~~~~~~~-------------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~   62 (231)
T 3aji_A            9 MICNLAYSGKLDELK-ERILADKSLAT-------------------------RTDQDSRTALHWACSAGHTEIVEFLLQL   62 (231)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHHCGGGGG-------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             hHHHHHHhCCHHHHH-HHHHhchhhhh-------------------------cCCCCCCCHHHHHHHcCcHHHHHHHHHh
Confidence            468899999999999 88887664321                         2345699999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |++++..+ ..|+||||+|+      ++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        63 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t  141 (231)
T 3aji_A           63 GVPVNDKD-DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT  141 (231)
T ss_dssp             TCCSCCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCCcC-CCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence            99999999 99999999997      689999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          313 ALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  174 (231)
T 3aji_A          142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNT  174 (231)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCC
Confidence            999999999999999999999999999999987

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.91  E-value=4.1e-23  Score=188.44  Aligned_cols=160  Identities=17%  Similarity=0.113  Sum_probs=103.2

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+++.++ .|+...+....                         .....|.||||.|+..|+.+++++|+++
T Consensus         8 ~L~~A~~~g~~~~v~-~Ll~~g~~~~~-------------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~   61 (285)
T 1wdy_A            8 LLIKAVQNEDVDLVQ-QLLEGGANVNF-------------------------QEEEGGWTPLHNAVQMSREDIVELLLRH   61 (285)
T ss_dssp             HHHHHHHTTCHHHHH-HHHHTTCCTTC-------------------------CCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHH-HHHHcCCCccc-------------------------ccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence            357799999999998 88876554322                         1123456666666666666666666666


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc------
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAV------  306 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~------  306 (345)
                      |++++..+ ..|.||||+|+      ++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..      
T Consensus        62 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~  140 (285)
T 1wdy_A           62 GADPVLRK-KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED  140 (285)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH
T ss_pred             CCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHH
Confidence            66666666 66666666664      456666666666666666666666666666666666666666666555      


Q ss_pred             ----CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Q 019158          307 ----DKDGLTALHKAIIGKKQAVTNYLLRE-SANPFVVDEVMWK  345 (345)
Q Consensus       307 ----d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gad~n~~d~~G~T  345 (345)
                          +..|.||||+|+..|+.+++++|+++ |++++.+|..|+|
T Consensus       141 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t  184 (285)
T 1wdy_A          141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN  184 (285)
T ss_dssp             HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred             HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence                55566666666666666666666655 6666666665554

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.91  E-value=1.9e-24  Score=201.53  Aligned_cols=164  Identities=12%  Similarity=0.025  Sum_probs=118.1

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .+...|.+|+       +.|++.|+.+.++ .|+..... +.                         ..  +|.||||.|
T Consensus        26 ~~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~g~~-~~-------------------------~~--~g~t~L~~A   69 (285)
T 3kea_A           26 KADVHGHSAS-------YYAIADNNVRLVC-TLLNAGAL-KN-------------------------LL--ENEFPLHQA   69 (285)
T ss_dssp             CCCTTSCCHH-------HHHHHTTCHHHHH-HHHHTTGG-GS-------------------------CC--TTCCHHHHH
T ss_pred             ccCCCCCCHH-------HHHHHcCCHHHHH-HHHhCCCC-CC-------------------------CC--CCCCHHHHH
Confidence            5566788887       5588899999997 66654321 11                         01  367788887


Q ss_pred             HhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCC-CcHHHHHHHcCCHHHHHHH
Q 019158          224 YGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKK-WLPLHSLAASGEFYFVDAL  296 (345)
Q Consensus       224 ~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G-~TpLh~Aa~~g~~eiv~~L  296 (345)
                      +..|+.+++++|+++|++++.++ ..|+||||+|+      ++++|+++|++++.++..| .||||+|+..|+.+++++|
T Consensus        70 ~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~L  148 (285)
T 3kea_A           70 ATLEDTKIVKILLFSGLDDSQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF  148 (285)
T ss_dssp             TTSSSCHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred             HHcCCHHHHHHHHHCCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            77788888888888888887777 77888888775      5677777788887777777 5777777777777777777


Q ss_pred             HhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          297 LKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       297 L~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++|+++... ..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       149 l~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t  196 (285)
T 3kea_A          149 LSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI  196 (285)
T ss_dssp             HTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCC
T ss_pred             HhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCC
Confidence            7777665221 26777777777777777777777777777777777665

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.91  E-value=4.9e-25  Score=194.02  Aligned_cols=153  Identities=12%  Similarity=0.011  Sum_probs=132.3

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcH----HHHHHH
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLD----DVSEFF  235 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~----evvklL  235 (345)
                      ++.|++.|+++.++ .++...+...                           ....|+||||.|+..++.    +++++|
T Consensus        10 l~~Aa~~g~~~~~~-~l~~~~~~~~---------------------------~~~~g~T~Lh~A~~~~~~~~~~~iv~~L   61 (186)
T 3t8k_A           10 VSAAAMLGTYEDFL-ELFEKGYEDK---------------------------ESVLKSNILYDVLRNNNDEARYKISMFL   61 (186)
T ss_dssp             HHHHHHHSCHHHHH-HHHHHSSSCH---------------------------HHHHTTTHHHHHTTCSCHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHH-HHHhcCcccc---------------------------cccCCCCHHHHHHHcCCcchHHHHHHHH
Confidence            68899999999998 7776543210                           113589999999998864    599999


Q ss_pred             HhCCCCCCCCCCCCCCCcchHHH------------HHHHHHhcCCCCccCCCCCC-cHHHHHHHcC-----CHHHHHHHH
Q 019158          236 NSGNYDPPDKKSDGPRRKLFTKE------------EKVLLNKKLPHLATATSKKW-LPLHSLAASG-----EFYFVDALL  297 (345)
Q Consensus       236 l~~gadin~~d~~~G~TpLh~Aa------------i~~lLl~~gadvn~~d~~G~-TpLh~Aa~~g-----~~eiv~~LL  297 (345)
                      +++|+++|.++ ..|+||||+|+            ++++|+++|+++|.+|..|+ ||||+|+..+     +.+++++|+
T Consensus        62 l~~Gadvn~~d-~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll  140 (186)
T 3t8k_A           62 INKGADIKSRT-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIF  140 (186)
T ss_dssp             HHTTCCSSCCC-TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHH
T ss_pred             HHCCCCCCCCC-CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHH
Confidence            99999999999 99999999875            47999999999999999999 9999999955     356999999


Q ss_pred             h-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          298 K-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       298 ~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      + +|++++.+|..|.||||+|+..|+.+++++|+++..+.+++++
T Consensus       141 ~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~  185 (186)
T 3t8k_A          141 SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN  185 (186)
T ss_dssp             TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred             HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence            9 9999999999999999999999999999999988766666654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.91  E-value=9.8e-24  Score=203.92  Aligned_cols=174  Identities=17%  Similarity=0.116  Sum_probs=139.5

Q ss_pred             HhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCC
Q 019158          137 IEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       137 le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ++.+..+ .+...|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..
T Consensus       153 l~~ga~vn~~d~~g~TpL-------~~A~~~g~~~iv~-~Ll~~ga~-~-------------------------~~~~~~  198 (373)
T 2fo1_E          153 IAAGADVNAMDCDENTPL-------MLAVLARRRRLVA-YLMKAGAD-P-------------------------TIYNKS  198 (373)
T ss_dssp             HHTCCCTTCCCTTSCCHH-------HHHHHHTCHHHHH-HHHHTTCC-S-------------------------CCCCTT
T ss_pred             HhcCCCCcCCCCCCCCHH-------HHHHHcChHHHHH-HHHHCCCC-C-------------------------cccCCC
Confidence            4566666 4567788887       5588899999997 66654322 1                         123346


Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCC---CCCCCCCCCCCCCcchHHH---------HHHHHHhcCCCCcc--------CCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGN---YDPPDKKSDGPRRKLFTKE---------EKVLLNKKLPHLAT--------ATS  275 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~g---adin~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~--------~d~  275 (345)
                      |.||||.|+..|+.+++++|+++|   ++++..+ ..|.||||+|+         ++++|+++|++++.        .|.
T Consensus       199 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~  277 (373)
T 2fo1_E          199 ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY  277 (373)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSC
T ss_pred             CCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccc
Confidence            788888888888889998888887   7888888 88889998775         46888888888876        566


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          276 KKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       276 ~G~TpLh~Aa~~g~~eiv~~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t  348 (373)
T 2fo1_E          278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT  348 (373)
T ss_dssp             CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCC
T ss_pred             cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCC
Confidence            8889999999999999999888775 888888888999999999999999999999989998888888876

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.91  E-value=2.3e-23  Score=197.21  Aligned_cols=178  Identities=20%  Similarity=0.133  Sum_probs=143.1

Q ss_pred             hcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCC
Q 019158          138 EFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPP  216 (345)
Q Consensus       138 e~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g  216 (345)
                      +.+... .....|.+|+       +.|+..|..+.++ .++........ .....               .........|
T Consensus       113 ~~~~~~~~~d~~g~t~l-------~~A~~~~~~~~~~-~ll~~ga~~~~-~~~~~---------------~~~~~~~~~g  168 (337)
T 4g8k_A          113 SKGADVNECDFYGFTAF-------MEAAVYGKVKALK-FLYKRGANVNL-RRKTK---------------EDQERLRKGG  168 (337)
T ss_dssp             TTTCCTTCBCTTCCBHH-------HHHHHTTCHHHHH-HHHHTTCCTTC-CCCCC--------------------CTTCS
T ss_pred             hccchhhhhccCCCCHH-------HHHHHcCcHHHHH-HHHHcCCCcch-hhccc---------------cccccccCCC
Confidence            344444 4556777776       5588899988887 66654332211 10000               0012345579


Q ss_pred             CcHHHHHHhCCcHHHHHHHHh-CCCCCCCCCCCCCCCcchHHH----------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNS-GNYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~-~gadin~~d~~~G~TpLh~Aa----------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .||||.|+..|+.+++++|++ .|++++.++ ..|.|++|+++          ++++|+++|++++.+|..|+||||+|+
T Consensus       169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d-~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~  247 (337)
T 4g8k_A          169 ATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV  247 (337)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC-TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred             CcHHHHHHHCCCHHHHHHHHhccCCCcCccC-CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            999999999999999999995 699999999 99999999764          568999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhC-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD  340 (345)
Q Consensus       286 ~~g~~eiv~~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d  340 (345)
                      ..|+.+++++|+.. |+++|.+|..|+||||+|+..|+.++|++||++||+++.+|
T Consensus       248 ~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~  303 (337)
T 4g8k_A          248 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  303 (337)
T ss_dssp             HTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred             HhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence            99999999999985 79999999999999999999999999999999999998765

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.90  E-value=6.2e-23  Score=187.20  Aligned_cols=128  Identities=20%  Similarity=0.158  Sum_probs=110.1

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH----------HHHHHHhcCCCCccCCCCCCcHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLPHLATATSKKWLPL  281 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa----------i~~lLl~~gadvn~~d~~G~TpL  281 (345)
                      +..|.||||.|+..++.+++++|++. |++++..+ ..|.||||+|+          ++++|+++|++++.++..|+|||
T Consensus       145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L  223 (285)
T 1wdy_A          145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL  223 (285)
T ss_dssp             TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC-CCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence            45688888888888888888888877 88888888 88888888774          56788888888888888888999


Q ss_pred             HHHHHcCCHHHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          282 HSLAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      |+|+..|+.+++++|++ +|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus       224 ~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~  284 (285)
T 1wdy_A          224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             HHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence            99999999999998888 7888888888899999999988899999999988988888773

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.90  E-value=2.5e-23  Score=185.43  Aligned_cols=191  Identities=17%  Similarity=0.051  Sum_probs=127.8

Q ss_pred             HHHHHhhCHHHHHHHHHHHhcCchh-hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCccccccc
Q 019158          119 VQEELNLTKKEKRQIALQIEFGSRV-EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDC  197 (345)
Q Consensus       119 ~~~e~~~~kke~~~i~~~le~~~~~-e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~  197 (345)
                      +...+..+..+..+.  -++.+... .+...|.+|+       ..|++.|+.+.++ .|+...+....            
T Consensus        13 l~~A~~~g~~~~~~~--Ll~~g~~~~~~~~~g~t~L-------~~A~~~~~~~~v~-~Ll~~~~~~~~------------   70 (240)
T 3eu9_A           13 IVKATQYGIYERCRE--LVEAGYDVRQPDKENVTLL-------HWAAINNRIDLVK-YYISKGAIVDQ------------   70 (240)
T ss_dssp             HHHHHHTTCHHHHHH--HHHTTCCTTCCCTTSCCHH-------HHHHHTTCHHHHH-HHHHTTCCTTC------------
T ss_pred             HHHHHHcCChHHHHH--HHHcCCCcCCCCCCCCCHH-------HHHHHhCCHHHHH-HHHHcCCcchh------------
Confidence            334444444443333  33455555 4455677776       5588899999997 77765553322            


Q ss_pred             CcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCc
Q 019158          198 GFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLA  271 (345)
Q Consensus       198 ~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn  271 (345)
                                   .....|.|||+.|+..++.+++++|++.|++++..+ ..|.||||+|+      ++++|+++|++++
T Consensus        71 -------------~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~  136 (240)
T 3eu9_A           71 -------------LGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLID-GEGCSCIHLAAQFGHTSIVAYLIAKGQDVD  136 (240)
T ss_dssp             -------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             -------------hcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence                         122236677777777777777777777777777777 77777777765      5677777777777


Q ss_pred             cCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          272 TATSKKWLPLHSLAASGE-FYFVDALLKHNVDINAVDK-DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       272 ~~d~~G~TpLh~Aa~~g~-~eiv~~LL~~Gadin~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..+..|.||||+|+..++ .+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       137 ~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  212 (240)
T 3eu9_A          137 MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGES  212 (240)
T ss_dssp             CCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCB
T ss_pred             ccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            777777777777775555 6677777777777777665 6777777777777777777777777777777777665

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.90  E-value=8.2e-24  Score=201.07  Aligned_cols=133  Identities=17%  Similarity=0.096  Sum_probs=122.4

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH---------HHHHHhcC-CCCccCCCCCCcHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEE---------KVLLNKKL-PHLATATSKKWLPL  281 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai---------~~lLl~~g-advn~~d~~G~TpL  281 (345)
                      .+..|.||||.|+..|+.+++++|+++|++++.++ ..|+||||+|+.         ++.|++++ ++++.+|..|+|||
T Consensus       127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL  205 (327)
T 1sw6_A          127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTIL  205 (327)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHH
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHH
Confidence            45679999999999999999999999999999999 999999999985         26667665 78999999999999


Q ss_pred             HHHHH----cCCHHHHHHHHhCCC---------------------------------------------CCcccCCCCCC
Q 019158          282 HSLAA----SGEFYFVDALLKHNV---------------------------------------------DINAVDKDGLT  312 (345)
Q Consensus       282 h~Aa~----~g~~eiv~~LL~~Ga---------------------------------------------din~~d~~G~T  312 (345)
                      |+|+.    .|+.+++++|++.++                                             ++|.+|..|+|
T Consensus       206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~T  285 (327)
T 1sw6_A          206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT  285 (327)
T ss_dssp             HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCC
T ss_pred             HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCC
Confidence            99999    899999999987743                                             58889999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          313 ALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       286 pLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T  318 (327)
T 1sw6_A          286 CLNIAARLGNISIVDALLDYGADPFIANKSGLR  318 (327)
T ss_dssp             HHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC
Confidence            999999999999999999999999999999987

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.90  E-value=4e-24  Score=196.69  Aligned_cols=175  Identities=16%  Similarity=0.109  Sum_probs=135.6

Q ss_pred             hhcCCCCCCcCCHHHHHHHHh---CCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHH
Q 019158          146 KKQGYLPLNSLDLKEYLAYKE---AKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWA  222 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~---g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~a  222 (345)
                      ...|.+|+       +.|+..   |+.+.++ .|+......-.           +.  .+++..  ....+..|.||||.
T Consensus        51 ~~~g~tpL-------~~A~~~~~~g~~~~v~-~Ll~~ga~~~~-----------~~--~~i~~~--~~~~d~~g~tpL~~  107 (273)
T 2pnn_A           51 PETGKTCL-------LKAMLNLHNGQNDTIA-LLLDVARKTDS-----------LK--QFVNAS--YTDSYYKGQTALHI  107 (273)
T ss_dssp             TTTCCCHH-------HHHHHSCBTTBCHHHH-HHHHHHHHTTC-----------HH--HHHTCC--CCSTTTTTCCHHHH
T ss_pred             CcCCCCHH-------HHHHHHHhcCChHHHH-HHHHhhccccc-----------hh--HHhhcc--cccccCCCCCHHHH
Confidence            56788887       336644   8888887 66654321100           00  000100  02244579999999


Q ss_pred             HHhCCcHHHHHHHHhCCCCCCCCCCC--------------CCCCcchHHH------HHHHHHh---cCCCCccCCCCCCc
Q 019158          223 VYGRGLDDVSEFFNSGNYDPPDKKSD--------------GPRRKLFTKE------EKVLLNK---KLPHLATATSKKWL  279 (345)
Q Consensus       223 A~~~~~~evvklLl~~gadin~~d~~--------------~G~TpLh~Aa------i~~lLl~---~gadvn~~d~~G~T  279 (345)
                      |+..|+.+++++|+++|++++..+ .              .|.||||+|+      ++++|++   +|++++.+|..|+|
T Consensus       108 A~~~g~~~~v~~Ll~~ga~~~~~~-~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~t  186 (273)
T 2pnn_A          108 AIERRNMTLVTLLVENGADVQAAA-NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNT  186 (273)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCB-CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC
T ss_pred             HHHcCCHHHHHHHHHCCCCcCccc-cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCc
Confidence            999999999999999999999998 6              7999999997      6899999   99999999999999


Q ss_pred             HHHHHHHcCC---------HHHHHHHHhCCCCCc-------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCC
Q 019158          280 PLHSLAASGE---------FYFVDALLKHNVDIN-------AVDKDGLTALHKAIIGKKQAVTNYLLRESA-NPFVVDEV  342 (345)
Q Consensus       280 pLh~Aa~~g~---------~eiv~~LL~~Gadin-------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga-d~n~~d~~  342 (345)
                      |||+|+..|+         .+++++|+++|++++       .+|..|+||||+|+..|+.+++++|+++|| |+......
T Consensus       187 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~  266 (273)
T 2pnn_A          187 VLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAA  266 (273)
T ss_dssp             HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------
T ss_pred             HHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhh
Confidence            9999999998         899999999999997       489999999999999999999999999999 88776655


Q ss_pred             CC
Q 019158          343 MW  344 (345)
Q Consensus       343 G~  344 (345)
                      ++
T Consensus       267 ~~  268 (273)
T 2pnn_A          267 AH  268 (273)
T ss_dssp             --
T ss_pred             hh
Confidence            54

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.90  E-value=3.9e-23  Score=202.28  Aligned_cols=134  Identities=19%  Similarity=0.156  Sum_probs=127.9

Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHH
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSL  284 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~A  284 (345)
                      .....|.|||+.|+..++.+++++|++.|++++..+ ..|.||||+|+      ++++|+++|++++..+..|+||||+|
T Consensus       207 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  285 (437)
T 1n11_A          207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLV  285 (437)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence            345578999999999999999999999999999999 99999999986      78999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       286 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t  346 (437)
T 1n11_A          286 AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS  346 (437)
T ss_dssp             HHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999987

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.90  E-value=6.8e-23  Score=179.05  Aligned_cols=155  Identities=15%  Similarity=0.143  Sum_probs=136.3

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .....|.+|+       +.|++.|+.+.++ .|+..... +                         ...+..|.||+|.|
T Consensus        34 ~~~~~g~t~L-------~~A~~~~~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~l~~A   79 (201)
T 3hra_A           34 EVDTEGNTPL-------NIAVHNNDIEIAK-ALIDRGAD-I-------------------------NLQNSISDSPYLYA   79 (201)
T ss_dssp             CCCTTSCCHH-------HHHHHHTCHHHHH-HHHHTTCC-T-------------------------TCCCTTSCCHHHHH
T ss_pred             CCCCCCCCHH-------HHHHHcCCHHHHH-HHHHcCCC-C-------------------------CCCCCCCCCHHHHH
Confidence            4456777776       5588999999997 66654332 1                         12344689999999


Q ss_pred             HhCCcHHHHHHHH-hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcC-CCCccCCCCCCcHHHHHHHcCC-----H
Q 019158          224 YGRGLDDVSEFFN-SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKL-PHLATATSKKWLPLHSLAASGE-----F  290 (345)
Q Consensus       224 ~~~~~~evvklLl-~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~g-advn~~d~~G~TpLh~Aa~~g~-----~  290 (345)
                      +..++.+++++|+ ..+++++..+ ..|.||||+|+      ++++|+++| ++++.+|..|+||||+|+..+.     .
T Consensus        80 ~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~  158 (201)
T 3hra_A           80 GAQGRTEILAYMLKHATPDLNKHN-RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ  158 (201)
T ss_dssp             HHTTCHHHHHHHHHHSCCCTTCCC-TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred             HHcCCHHHHHHHHhccCccccccc-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence            9999999999999 6778999999 99999999987      689999999 9999999999999999999998     9


Q ss_pred             HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          291 YFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       291 eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      +++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus       159 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            9999999999999999999999999999999999999999987

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.90  E-value=1.9e-24  Score=195.88  Aligned_cols=132  Identities=20%  Similarity=0.172  Sum_probs=124.4

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      ...+|.|+|+.|+..|+.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus        17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~   95 (229)
T 2vge_A           17 ARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPN-EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA   95 (229)
T ss_dssp             TTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             cccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            45568899999999999999999999999999999 99999999997      789999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccC-CCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVD-KDGLTALHKA--IIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d-~~G~TpLh~A--a~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      ..|+.+++++|+++|++++.++ ..|+||||+|  +..|+.+++++|+++|++++.+|..|.
T Consensus        96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~  157 (229)
T 2vge_A           96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAV  157 (229)
T ss_dssp             HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEE
T ss_pred             HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCch
Confidence            9999999999999999999986 6999999999  999999999999999999999887664

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.90  E-value=1.3e-23  Score=191.32  Aligned_cols=168  Identities=15%  Similarity=0.087  Sum_probs=140.0

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHh---CCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKE---AKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKW  221 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~---g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~  221 (345)
                      +...|.+|+       +.|+..   |+.+.++ .|+.........       .      .+++..  ....+..|.||||
T Consensus        39 ~d~~g~t~L-------~~A~~~~~~g~~~~v~-~Ll~~g~~~~~~-------~------~~~~~~--~~~~d~~g~t~L~   95 (256)
T 2etb_A           39 EGSTGKTCL-------MKAVLNLQDGVNACIM-PLLQIDKDSGNP-------K------PLVNAQ--CTDEFYQGHSALH   95 (256)
T ss_dssp             BTTTTBCHH-------HHHHHTCBTTBCTTHH-HHHHHHHHTTCS-------S------CGGGCC--CCSTTTTTCCHHH
T ss_pred             CCCCCCCHH-------HHHHHccccchHHHHH-HHHhcCCcccch-------h------hhcccc--cccccccCCCHHH
Confidence            567888887       447778   9999997 777553321110       0      000110  1224467999999


Q ss_pred             HHHhCCcHHHHHHHHhCCCCCCCCCCCC-------------CCCcchHHH------HHHHHHh---cCCCCccCCCCCCc
Q 019158          222 AVYGRGLDDVSEFFNSGNYDPPDKKSDG-------------PRRKLFTKE------EKVLLNK---KLPHLATATSKKWL  279 (345)
Q Consensus       222 aA~~~~~~evvklLl~~gadin~~d~~~-------------G~TpLh~Aa------i~~lLl~---~gadvn~~d~~G~T  279 (345)
                      .|+..|+.+++++|+++|++++..+ ..             |.||||+|+      ++++|++   +|++++.+|..|+|
T Consensus        96 ~A~~~g~~~~v~~Ll~~ga~~~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~T  174 (256)
T 2etb_A           96 IAIEKRSLQCVKLLVENGADVHLRA-CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNT  174 (256)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCC-CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCccc-ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCC
Confidence            9999999999999999999999998 65             999999997      7899999   99999999999999


Q ss_pred             HHHHHHH--cCCHH-------HHHHHHhCCCCC-------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          280 PLHSLAA--SGEFY-------FVDALLKHNVDI-------NAVDKDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       280 pLh~Aa~--~g~~e-------iv~~LL~~Gadi-------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      |||+|+.  .++.+       ++++|+++|+++       +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       175 pLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~  247 (256)
T 2etb_A          175 VLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG  247 (256)
T ss_dssp             HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence            9999999  88888       999999999999       899999999999999999999999999998754

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.90  E-value=1.9e-23  Score=193.67  Aligned_cols=133  Identities=18%  Similarity=0.188  Sum_probs=123.8

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      ....|.|+|+.|+..|+.+++++|++.|++++..+ ..|.||||+|+      ++++|+++|++++..|..|+||||+|+
T Consensus        36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~  114 (299)
T 1s70_B           36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYAN-VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA  114 (299)
T ss_dssp             CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            34467899999999999999999999999999999 99999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCC---------------------------------------------------------
Q 019158          286 ASGEFYFVDALLKHNVDINAVDK---------------------------------------------------------  308 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~---------------------------------------------------------  308 (345)
                      ..|+.+++++|+++|++++..|.                                                         
T Consensus       115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  194 (299)
T 1s70_B          115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR  194 (299)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence            99999999999999999886653                                                         


Q ss_pred             ---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          309 ---DGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       309 ---~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                         .|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~t  234 (299)
T 1s70_B          195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT  234 (299)
T ss_dssp             CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred             hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCc
Confidence               4678899999999999999999999999999999987

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.90  E-value=3.4e-23  Score=174.29  Aligned_cols=128  Identities=18%  Similarity=0.135  Sum_probs=120.6

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHH-----HHHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTK-----EEKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~A-----ai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      +.|+|+.|+..|+.++++.|++. +.+++..+ ..|+||||++     .++++|+++|++++.+|..|+||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            45789999999999999999988 45999999 9999999993     27899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|+|
T Consensus        81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t  135 (156)
T 1bd8_A           81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLT  135 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCC
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCC
Confidence            9999999999999999999999999999999999999999999 999999999987

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.90  E-value=2.5e-24  Score=195.34  Aligned_cols=127  Identities=17%  Similarity=0.124  Sum_probs=118.8

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      ..|.||||.|+..|+.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..
T Consensus        35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~  113 (239)
T 1ycs_B           35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN-DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC  113 (239)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred             chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence            357899999999999999999999999999999 99999999997      68999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCC-CHHHHH--HHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGL-TALHKA--IIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~-TpLh~A--a~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      |+.+++++|+++|++++.++..|. ||||+|  +..|+.+++++|+++|++++..+.
T Consensus       114 ~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~  170 (239)
T 1ycs_B          114 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK  170 (239)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred             CCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence            999999999999999999998887 999999  788999999999999999887754

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.90  E-value=1.3e-22  Score=181.81  Aligned_cols=167  Identities=19%  Similarity=0.118  Sum_probs=147.4

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhc---CCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLD---KPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKW  221 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~---~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~  221 (345)
                      ++..|.+|+       +.|++.|+.+.++ .|+..   ....+                         ...+..|.||||
T Consensus         5 ~d~~g~t~L-------~~A~~~g~~~~v~-~Ll~~~~~~~~~~-------------------------~~~~~~g~t~L~   51 (241)
T 1k1a_A            5 ADEDGDTPL-------HIAVVQGNLPAVH-RLVNLFQQGGREL-------------------------DIYNNLRQTPLH   51 (241)
T ss_dssp             --CTTCCHH-------HHHHHTTCHHHHH-HHHHHHHHTTCCS-------------------------CCCCTTSCCHHH
T ss_pred             cCCCCCcHH-------HHHHHcCCHHHHH-HHHHHHHhcCCCC-------------------------CcccccCCCHHH
Confidence            456677776       5588999999998 77652   22211                         224456999999


Q ss_pred             HHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCC----CCccCCCCCCcHHHHHHHcCCHH
Q 019158          222 AVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLP----HLATATSKKWLPLHSLAASGEFY  291 (345)
Q Consensus       222 aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~ga----dvn~~d~~G~TpLh~Aa~~g~~e  291 (345)
                      .|+..|+.+++++|+++|++++..+ ..|.||||+|+      ++++|+++++    +++..+..|+||||+|+..|+.+
T Consensus        52 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~  130 (241)
T 1k1a_A           52 LAVITTLPSVVRLLVTAGASPMALD-RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE  130 (241)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH
Confidence            9999999999999999999999999 99999999996      6799999987    89999999999999999999999


Q ss_pred             HHHHHHhCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          292 FVDALLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       292 iv~~LL~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       131 ~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  185 (241)
T 1k1a_A          131 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS  185 (241)
T ss_dssp             HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCB
T ss_pred             HHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            9999999999999998 89999999999999999999999999999999999987

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.89  E-value=1.2e-23  Score=190.84  Aligned_cols=129  Identities=17%  Similarity=0.126  Sum_probs=91.9

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      ..|.|||+.|+..+..++++.|+++|++++..  ..|.||||+|+      ++++|++.|++++.+|..|+||||+||..
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~   80 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA   80 (239)
T ss_dssp             ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            35899999999999999999999999999854  58899999997      68999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      |+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  137 (239)
T 1ycs_B           81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM  137 (239)
T ss_dssp             TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred             CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence            999999999999999999999999999999999999999999999999999998775

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.89  E-value=4e-22  Score=187.53  Aligned_cols=160  Identities=18%  Similarity=0.150  Sum_probs=106.1

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+.+.++ .++...+..+..                         .+..|.||||.|+..|+.+++++|+++
T Consensus        27 ~L~~A~~~g~~~~v~-~ll~~~~~~~~~-------------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~   80 (351)
T 3utm_A           27 ELLEAARSGNEEKLM-ALLTPLNVNCHA-------------------------SDGRKSTPLHLAAGYNRVRIVQLLLQH   80 (351)
T ss_dssp             HHHHHHHHTCHHHHH-HHCCTTTTTCCC-------------------------SSTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             hHHHHHHcCCHHHHH-HHHHhcCCCccc-------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            368899999999998 888765544432                         222345555555555555555555555


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCH----------------------
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEF----------------------  290 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~----------------------  290 (345)
                      |++++.++ ..|+||||+|+      ++++|+++|++++..|..|+||||+|+..|+.                      
T Consensus        81 g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~  159 (351)
T 3utm_A           81 GADVHAKD-KGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKS  159 (351)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCccC-CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc
Confidence            55555555 55555555543      34555555555555555555555555555444                      


Q ss_pred             --------------------------------------------------------------------HHHHHHHhCCCC
Q 019158          291 --------------------------------------------------------------------YFVDALLKHNVD  302 (345)
Q Consensus       291 --------------------------------------------------------------------eiv~~LL~~Gad  302 (345)
                                                                                          +++++|+++|++
T Consensus       160 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~  239 (351)
T 3utm_A          160 AVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN  239 (351)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC
T ss_pred             chHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC
Confidence                                                                                455555556666


Q ss_pred             CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          303 INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       303 in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus       240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t  282 (351)
T 3utm_A          240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQT  282 (351)
T ss_dssp             TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            6777888999999999999999999999999999999999887

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.89  E-value=9.4e-24  Score=192.34  Aligned_cols=167  Identities=18%  Similarity=0.105  Sum_probs=135.9

Q ss_pred             hcCCCCCCcCCHHHHHHH---HhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          147 KQGYLPLNSLDLKEYLAY---KEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       147 ~~g~~pl~~~~~~~~~a~---~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      ..|.+|++       .|+   +.|+.+.++ .|+........       ..      .++..  .....+..|.||||.|
T Consensus        44 ~~g~t~L~-------~A~~~~~~g~~~~v~-~Ll~~g~~~~~-------~~------~~~~~--~~~~~d~~g~t~L~~A  100 (260)
T 3jxi_A           44 STGKTCLP-------KALLNLSAGRNDTIP-ILLDIAEKTGN-------MR------EFINS--PFRDVYYRGQTALHIA  100 (260)
T ss_dssp             TTCCCHHH-------HHHTSCBTTBCTHHH-HHHHHHHHTTC-------HH------HHHTC--CBCCSSEESBCHHHHH
T ss_pred             CCCCcHHH-------HHHHHhhcCCHHHHH-HHHHhcccccc-------hH------hhhcc--cccccccCCCCHHHHH
Confidence            56888873       355   679989887 66654321110       00      00000  0123445799999999


Q ss_pred             HhCCcHHHHHHHHhCCCCCCCCCC-------------CCCCCcchHHH------HHHHHHh---cCCCCccCCCCCCcHH
Q 019158          224 YGRGLDDVSEFFNSGNYDPPDKKS-------------DGPRRKLFTKE------EKVLLNK---KLPHLATATSKKWLPL  281 (345)
Q Consensus       224 ~~~~~~evvklLl~~gadin~~d~-------------~~G~TpLh~Aa------i~~lLl~---~gadvn~~d~~G~TpL  281 (345)
                      +..|+.+++++|+++|++++..+.             ..|+||||+|+      ++++|++   +|++++.+|..|+|||
T Consensus       101 ~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL  180 (260)
T 3jxi_A          101 IERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL  180 (260)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred             HHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence            999999999999999999999882             37999999997      7899999   9999999999999999


Q ss_pred             HHHHHcCC---------HHHHHHHHhCCCCC-------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          282 HSLAASGE---------FYFVDALLKHNVDI-------NAVDKDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       282 h~Aa~~g~---------~eiv~~LL~~Gadi-------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      |+|+..|+         .+++++|+++|+++       +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       181 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~  251 (260)
T 3jxi_A          181 HALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD  251 (260)
T ss_dssp             HHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence            99999888         79999999999998       679999999999999999999999999998764

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.88  E-value=1.1e-22  Score=188.77  Aligned_cols=156  Identities=14%  Similarity=0.056  Sum_probs=137.9

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .++..|.+|+       +.|++.|+.+.++ .|+......+                         ...+..|.||++.|
T Consensus       106 ~~d~~g~T~L-------h~A~~~g~~~~v~-~Ll~~g~~~~-------------------------~~~~~~g~tpL~~a  152 (276)
T 4hbd_A          106 IADSNGNTAL-------HYSVSHANFPVVQ-QLLDSGVCKV-------------------------DKQNRAGYSPIMLT  152 (276)
T ss_dssp             CCCTTSCCHH-------HHHHHTTCHHHHH-HHHHTSCCCT-------------------------TCCCTTSCCHHHHG
T ss_pred             CCCCCCCCHH-------HHHHHCCCHHHHH-HHHHCCCCcC-------------------------CCCCCCCCCHHHHH
Confidence            3456788887       5588999999997 7776554222                         22445699999999


Q ss_pred             H-----hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHH
Q 019158          224 Y-----GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       224 ~-----~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~ei  292 (345)
                      +     ..+..+++++|++.|.+++..+ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus       153 ~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~i  231 (276)
T 4hbd_A          153 ALATLKTQDDIETVLQLFRLGNINAKAS-QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEI  231 (276)
T ss_dssp             GGCCCCSHHHHHHHHHHHHHSCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHhhhhhhHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence            8     5688999999999999999999 99999999997      7899999999999999999999999999999999


Q ss_pred             HHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          293 VDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       293 v~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      +++|++ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus       232 v~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          232 AGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            999999 89999999999999999999999999999999874

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.88  E-value=1.6e-22  Score=195.42  Aligned_cols=165  Identities=14%  Similarity=0.108  Sum_probs=143.8

Q ss_pred             hcCCCCCCcCCHHHHHHHHhCCccccCchhhh-------cCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcH
Q 019158          147 KQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVL-------DKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNP  219 (345)
Q Consensus       147 ~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~-------~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tp  219 (345)
                      ..|.+||       +.|+..|+.+.++ .|+.       +....+                         +..+..|.||
T Consensus       123 ~~g~t~L-------h~Aa~~g~~~~v~-~Ll~~~~~~ll~~ga~v-------------------------n~~d~~g~Tp  169 (373)
T 2fo1_E          123 RHNRTVL-------HWIASNSSAEKSE-DLIVHEAKECIAAGADV-------------------------NAMDCDENTP  169 (373)
T ss_dssp             SSCCCHH-------HHHHCTTCCSCCT-THHHHHHHHHHHTCCCT-------------------------TCCCTTSCCH
T ss_pred             cCCCCHH-------HHHHHCCCHHHHH-HHHHHHHHHHHhcCCCC-------------------------cCCCCCCCCH
Confidence            4566666       4588889988887 6653       222111                         2345579999


Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcC---CCCccCCCCCCcHHHHHHHcC--
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKL---PHLATATSKKWLPLHSLAASG--  288 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~g---advn~~d~~G~TpLh~Aa~~g--  288 (345)
                      ||.|+..|+.+++++|+++|++++..+ ..|.||||+|+      ++++|+.+|   ++++..|..|+||||+|+..+  
T Consensus       170 L~~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~  248 (373)
T 2fo1_E          170 LMLAVLARRRRLVAYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR  248 (373)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST
T ss_pred             HHHHHHcChHHHHHHHHHCCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCc
Confidence            999999999999999999999999999 99999999997      689999988   899999999999999999998  


Q ss_pred             -CHHHHHHHHhCCCCCcc--------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCC
Q 019158          289 -EFYFVDALLKHNVDINA--------VDKDGLTALHKAIIGKKQAVTNYLLRES-ANPFVVDEVMWK  345 (345)
Q Consensus       289 -~~eiv~~LL~~Gadin~--------~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-ad~n~~d~~G~T  345 (345)
                       +.+++++|+++|++++.        .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus       249 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T  315 (373)
T 2fo1_E          249 DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT  315 (373)
T ss_dssp             THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred             chHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence             89999999999999986        6779999999999999999999999875 999999999987

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=3.3e-23  Score=185.00  Aligned_cols=129  Identities=13%  Similarity=-0.015  Sum_probs=108.4

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhc-CCCCccCCCCCCcHHHHHHHc
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKK-LPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~-gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      .|.||||.|+..|+.+++++|++.|++++.++ ..|+||||+|+      ++++|+.+ |++++.+|..|+||||+|+..
T Consensus        72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~  150 (222)
T 3ehr_A           72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLD-KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK  150 (222)
T ss_dssp             EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred             ccccccccccccCcHHHHHHHHhCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence            47899999999999999999999999999999 99999999997      68999998 999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW  344 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~  344 (345)
                      |+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|+..|++.+..|..|+
T Consensus       151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~  207 (222)
T 3ehr_A          151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY  207 (222)
T ss_dssp             TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred             CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence            999999999999999999999999999999999999999999999999988887765

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.88  E-value=1.1e-21  Score=185.74  Aligned_cols=159  Identities=16%  Similarity=0.111  Sum_probs=126.0

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+++.++ .|+....+..                         ......|+||||.|+..|+.+++++|+++|
T Consensus        29 L~~Av~~g~~~~V~-~LL~~Gadvn-------------------------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g   82 (337)
T 4g8k_A           29 LIKAVQNEDVDLVQ-QLLEGGANVN-------------------------FQEEEGGWTPLHNAVQMSREDIVELLLRHG   82 (337)
T ss_dssp             HHHHHHTTCHHHHH-HHHHHTCCTT-------------------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHH-HHHHCCCCCC-------------------------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence            68899999999998 7776543211                         112335899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc-------
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAV-------  306 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~-------  306 (345)
                      ++++.++ ..+.++++.++      +...++..+++++..|..|+||||+|+..|+.+++++|+++|++++..       
T Consensus        83 a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~  161 (337)
T 4g8k_A           83 ADPVLRK-KNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ  161 (337)
T ss_dssp             CCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC---
T ss_pred             Cchhhhc-cCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc
Confidence            9999888 88888888765      456777788888888888888888888888888888888888777643       


Q ss_pred             ---CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          307 ---DKDGLTALHKAIIGKKQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       307 ---d~~G~TpLh~Aa~~g~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                         +..|.||||+|+..|+.+++++||+ .|++++.+|..|+|
T Consensus       162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t  204 (337)
T 4g8k_A          162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN  204 (337)
T ss_dssp             --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred             ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCc
Confidence               3457788888888888888888885 58888888877765

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.88  E-value=3.4e-23  Score=192.99  Aligned_cols=168  Identities=11%  Similarity=0.049  Sum_probs=143.1

Q ss_pred             HhcCchhhhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCC
Q 019158          137 IEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPP  216 (345)
Q Consensus       137 le~~~~~e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g  216 (345)
                      ++.+.....+ .|.+|+       +.|+..|+.+.++ .|+..... +                         ...+..|
T Consensus        51 l~~g~~~~~~-~g~t~L-------~~A~~~g~~~~v~-~Ll~~ga~-~-------------------------~~~d~~g   95 (285)
T 3kea_A           51 LNAGALKNLL-ENEFPL-------HQAATLEDTKIVK-ILLFSGLD-D-------------------------SQFDDKG   95 (285)
T ss_dssp             HHTTGGGSCC-TTCCHH-------HHHTTSSSCHHHH-HHHHTTCC-T-------------------------TCCCTTS
T ss_pred             HhCCCCCCCC-CCCCHH-------HHHHHcCCHHHHH-HHHHCCCC-C-------------------------CCcCCCC
Confidence            4456665433 477776       5588899999997 66654332 1                         1234469


Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCC-CCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGP-RRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G-~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      .||||.|+..|+.+++++|+++|++++..+ ..| .||||+|+      ++++|+++|+++... ..|+||||+|+..|+
T Consensus        96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~  173 (285)
T 3kea_A           96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYG-KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGH  173 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHCGGGGGCS-SSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTC
T ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCCccC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcCh
Confidence            999999999999999999999999999999 888 79999997      789999999887333 289999999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTA-LHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~Tp-Lh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      .+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|.
T Consensus       174 ~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~  226 (285)
T 3kea_A          174 VDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL  226 (285)
T ss_dssp             HHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG
T ss_pred             HHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh
Confidence            999999999999999999999998 9999999999999999999999999875

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.88  E-value=1.3e-21  Score=174.33  Aligned_cols=159  Identities=16%  Similarity=0.005  Sum_probs=141.1

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+++.++ .|+..... +                         ......|.|||+.|+..++.+++++|++.|
T Consensus        13 l~~A~~~g~~~~~~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~   65 (240)
T 3eu9_A           13 IVKATQYGIYERCR-ELVEAGYD-V-------------------------RQPDKENVTLLHWAAINNRIDLVKYYISKG   65 (240)
T ss_dssp             HHHHHHTTCHHHHH-HHHHTTCC-T-------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHcCChHHHH-HHHHcCCC-c-------------------------CCCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            47799999999998 77765432 1                         123346899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCH
Q 019158          240 YDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA  313 (345)
Q Consensus       240 adin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~Tp  313 (345)
                      ++++......|.||||+|+      ++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus        66 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~  145 (240)
T 3eu9_A           66 AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTP  145 (240)
T ss_dssp             CCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcH
Confidence            9998776356999999986      6899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCC-HHHHHHHHHCCCCCCCCCC-CCCC
Q 019158          314 LHKAIIGKK-QAVTNYLLRESANPFVVDE-VMWK  345 (345)
Q Consensus       314 Lh~Aa~~g~-~eiv~~LL~~Gad~n~~d~-~G~T  345 (345)
                      ||+|+..++ .+++++|++.|++++..+. .|+|
T Consensus       146 l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t  179 (240)
T 3eu9_A          146 LMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNT  179 (240)
T ss_dssp             HHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCC
T ss_pred             HHHHHHhCChHHHHHHHHhcCCCcchhhccCCCc
Confidence            999997766 8999999999999999987 7776

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.88  E-value=2.6e-22  Score=191.97  Aligned_cols=186  Identities=11%  Similarity=0.033  Sum_probs=136.7

Q ss_pred             hhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc----------cccCcccccCCCCCCCCCCCC
Q 019158          146 KKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED----------RDCGFQDFVNSSSSTCTQRVP  215 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~----------~~~~f~~~v~~~~~~~~~~~~  215 (345)
                      ...|.+||       +.|++.|+++.++ .|+....+ +........++          +.+++..  ....  ......
T Consensus        17 d~~g~t~L-------~~Aa~~g~~~~v~-~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll--~~g~--~~~~~~   83 (364)
T 3ljn_A           17 DDENMEKI-------HVAARKGQTDEVR-RLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLA--SVGE--VHSLWH   83 (364)
T ss_dssp             CHHHHHHH-------HHHHHHTCHHHHH-HHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHH--HHCC--CCCCBT
T ss_pred             CCCCCCHH-------HHHHHcCCHHHHH-HHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHH--HCCC--CccccC
Confidence            34455565       6689999999998 77765432 22111111111          1111100  1111  111224


Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhC----CCCCCC-----------------CCCCCCCCcchHHH--------HHHHHHhc
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSG----NYDPPD-----------------KKSDGPRRKLFTKE--------EKVLLNKK  266 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~----gadin~-----------------~d~~~G~TpLh~Aa--------i~~lLl~~  266 (345)
                      |.||||.|+..++.+++++|++.    |++++.                 .+ ..|.||||+|+        ++++|+++
T Consensus        84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~v~~Ll~~  162 (364)
T 3ljn_A           84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTALHWCVGLGPEYLEMIKILVQL  162 (364)
T ss_dssp             TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence            56666666666666666666665    555554                 66 78999999885        67899999


Q ss_pred             CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          267 LPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD-----INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       267 gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-----in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      |++++.+|..|+||||+|+..|+.+++++|+++|++     ++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus       163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~  242 (364)
T 3ljn_A          163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN  242 (364)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999999999999999999988     999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 019158          342 VMWK  345 (345)
Q Consensus       342 ~G~T  345 (345)
                      .|+|
T Consensus       243 ~g~t  246 (364)
T 3ljn_A          243 EHTV  246 (364)
T ss_dssp             TSCC
T ss_pred             CCCC
Confidence            9987

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.87  E-value=7.6e-23  Score=169.11  Aligned_cols=123  Identities=18%  Similarity=0.097  Sum_probs=111.4

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..|.||||.|+..++.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus         6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~   84 (137)
T 3c5r_A            6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKD-HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA   84 (137)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence            45679999999999999999999999999999999 99999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..+..+++.+|.+.+..
T Consensus        85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s  134 (137)
T 3c5r_A           85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS  134 (137)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence            99999999999999999999999999999999999999999888776543

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=2.1e-21  Score=160.42  Aligned_cols=105  Identities=20%  Similarity=0.242  Sum_probs=98.4

Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      |+|+ .++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus         1 G~d~-~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTN-HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS   78 (137)
T ss_dssp             ---C-CCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred             CCCC-CcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence            6777 677 89999999997      679999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          313 ALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  111 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLR  111 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            999999999999999999999999999999987

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.86  E-value=9.4e-22  Score=159.70  Aligned_cols=106  Identities=20%  Similarity=0.115  Sum_probs=98.1

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      ..|.|+||.|+..|+.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..
T Consensus         5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~   83 (123)
T 3aaa_C            5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTL-EGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE   83 (123)
T ss_dssp             --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCC-TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            357899999999999999999999999999999 99999999987      68999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc
Q 019158          288 GEFYFVDALLKHNVDINAVDKDGLTALHKAIIG  320 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~  320 (345)
                      |+.+++++|+++|++++.+|..|.||||+|+..
T Consensus        84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~  116 (123)
T 3aaa_C           84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ  116 (123)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred             CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence            999999999999999999999999999999543

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.85  E-value=2e-22  Score=177.30  Aligned_cols=127  Identities=14%  Similarity=0.043  Sum_probs=111.7

Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH----------HHHHHHhcCCCCccCCCCCCcHHHHHHH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE----------EKVLLNKKLPHLATATSKKWLPLHSLAA  286 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa----------i~~lLl~~gadvn~~d~~G~TpLh~Aa~  286 (345)
                      .++++.|+..|+.+.++.++..+.+  ..+...|+||||+|+          ++++|+++|+++|.+|..|+||||+|+.
T Consensus         7 ~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~   84 (186)
T 3t8k_A            7 YRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ   84 (186)
T ss_dssp             CSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence            3558888888999999888887643  333256999999985          6899999999999999999999999999


Q ss_pred             cCC------HHHHHHHHhCCCCCcccCCCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          287 SGE------FYFVDALLKHNVDINAVDKDGL-TALHKAIIGK-----KQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       287 ~g~------~eiv~~LL~~Gadin~~d~~G~-TpLh~Aa~~g-----~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      .|+      .+++++|+++|+++|.+|..|+ ||||+|+..+     +.+++++|++ +|++++.+|..|+|
T Consensus        85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T  156 (186)
T 3t8k_A           85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT  156 (186)
T ss_dssp             HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred             cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence            987      6889999999999999999999 9999999954     3579999999 99999999999987

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.84  E-value=3.9e-21  Score=158.92  Aligned_cols=105  Identities=16%  Similarity=0.006  Sum_probs=101.3

Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKD-GL  311 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~-G~  311 (345)
                      +++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |+
T Consensus         2 ~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLG-GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCC-CCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CCCccCCC-CCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            57899999 99999999997      6899999999999999999999999999 9999999999999999999999 99


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  113 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL  113 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence            9999999999999999999999999999999987

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.84  E-value=7.5e-21  Score=165.25  Aligned_cols=117  Identities=22%  Similarity=0.170  Sum_probs=107.1

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC-CCCCcHHHHHHH
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT-SKKWLPLHSLAA  286 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-~~G~TpLh~Aa~  286 (345)
                      ..|.||||.|+..|+.++++.|++ |++++.++ ..|+||||+|+      ++++|+++|++++.++ ..|+||||+|+.
T Consensus        42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~  119 (183)
T 3deo_A           42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  119 (183)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence            468899999999999999999999 99999999 99999999997      6899999999999998 899999999999


Q ss_pred             cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc----------------CCHHHHHHHHHC
Q 019158          287 SGEFYFVDALLKHNVDINAVDKDGLTALHKAIIG----------------KKQAVTNYLLRE  332 (345)
Q Consensus       287 ~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~----------------g~~eiv~~LL~~  332 (345)
                      .|+.+++++|+++|++++.+|..|+||||+|+..                |+.+++++|.++
T Consensus       120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999875                456666666543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.84  E-value=4.6e-21  Score=174.70  Aligned_cols=120  Identities=22%  Similarity=0.160  Sum_probs=111.7

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC-CCCCcHHHHHHH
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT-SKKWLPLHSLAA  286 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-~~G~TpLh~Aa~  286 (345)
                      ..|.||||.|+..|+.+++++|++ |++++.++ ..|+||||+|+      ++++|+++|++++.++ ..|+||||+|+.
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~  120 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  120 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence            368899999999999999999999 99999999 99999999997      6899999999999998 889999999999


Q ss_pred             cCCHHHHHHHHhCCCCCcccCCCCCCHHHHHH----------------HcCCHHHHHHHHHCCCC
Q 019158          287 SGEFYFVDALLKHNVDINAVDKDGLTALHKAI----------------IGKKQAVTNYLLRESAN  335 (345)
Q Consensus       287 ~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa----------------~~g~~eiv~~LL~~Gad  335 (345)
                      .|+.+++++|+++|++++.+|..|+||||+|+                ..|+.+++++|++++.+
T Consensus       121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~  185 (244)
T 3ui2_A          121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE  185 (244)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence            99999999999999999999999999999988                66889999999986443

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.83  E-value=2.6e-20  Score=144.06  Aligned_cols=75  Identities=32%  Similarity=0.370  Sum_probs=65.2

Q ss_pred             HHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          261 VLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       261 ~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      ++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++||+
T Consensus        19 ~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           19 KLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            344444444555556788999999999999999999999999999999999999999999999999999999985

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.83  E-value=2.5e-20  Score=151.22  Aligned_cols=98  Identities=22%  Similarity=0.183  Sum_probs=93.2

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK  321 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g  321 (345)
                      ..|.||||+|+      ++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus         5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~   84 (123)
T 3aaa_C            5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG   84 (123)
T ss_dssp             --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            57889999987      689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          322 KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       322 ~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.+|..|+|
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~t  108 (123)
T 3aaa_C           85 HVSCVKLLLSKGADKTVKGPDGLT  108 (123)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCC
Confidence            999999999999999999999987

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.83  E-value=5.4e-20  Score=171.52  Aligned_cols=120  Identities=15%  Similarity=0.036  Sum_probs=111.1

Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCC------CCCCCCCCCcchHHH---------HHHHHHhcCCCCccCCCCCCcHH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPP------DKKSDGPRRKLFTKE---------EKVLLNKKLPHLATATSKKWLPL  281 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin------~~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d~~G~TpL  281 (345)
                      .++|+.|+..+..+.+..+++.|++++      ..+ ..|+||||+|+         ++++|+++|+++|.+|..|+|||
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~-~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL  209 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGH-EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL  209 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCS-STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred             hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccc-cCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence            456899999999999999999999954      447 88999999986         56899999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q 019158          282 HSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF  337 (345)
Q Consensus       282 h~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n  337 (345)
                      |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus       210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~  265 (278)
T 1dcq_A          210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF  265 (278)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            99999999999999999999999999999999999999999999999999998643

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.82  E-value=2.7e-20  Score=175.58  Aligned_cols=120  Identities=16%  Similarity=0.033  Sum_probs=112.9

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCC------CCCCCCCCcchHHH---------HHHHHHhcCCCCccCCCCCCcH
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPD------KKSDGPRRKLFTKE---------EKVLLNKKLPHLATATSKKWLP  280 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~------~d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d~~G~Tp  280 (345)
                      ..++|+.|+..++.++++.|++.|++++.      .+ ..|+||||+|+         ++++|+++|++++.+|..|+||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA  229 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSC-SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccC-CCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            44679999999999999999999999998      57 89999999987         5799999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      ||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~  285 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT  285 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999998763

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.81  E-value=1.6e-20  Score=150.44  Aligned_cols=98  Identities=23%  Similarity=0.169  Sum_probs=76.8

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK  321 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g  321 (345)
                      ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus         7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~   86 (115)
T 2l6b_A            7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG   86 (115)
T ss_dssp             CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence            44555555543      345555555556666667788888888899999999999999999989999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          322 KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       322 ~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.++..|.|
T Consensus        87 ~~~~~~~Ll~~ga~~n~~~~~~~~  110 (115)
T 2l6b_A           87 HHEIVKLLDAKGADVNARSWGSSH  110 (115)
T ss_dssp             CHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred             CHHHHHHHHHcCCCCCcCCccccc
Confidence            999999999999999888888765

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.81  E-value=1.2e-19  Score=176.30  Aligned_cols=121  Identities=17%  Similarity=0.094  Sum_probs=113.1

Q ss_pred             CCCCcHHHHHHhC-CcHHHHHHHHhCCCCCCCCCC-CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          214 VPPKNPKWAVYGR-GLDDVSEFFNSGNYDPPDKKS-DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       214 ~~g~tpL~aA~~~-~~~evvklLl~~gadin~~d~-~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      ..+.|+||.|+.. ++.+++++|+++|++++..+. ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus       197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~  276 (368)
T 3jue_A          197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT  276 (368)
T ss_dssp             CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            3466899999999 999999999999999998762 57999999997      689999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA  334 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga  334 (345)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+..|.
T Consensus       277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~  325 (368)
T 3jue_A          277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM  325 (368)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred             HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999998763

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.80  E-value=1.4e-19  Score=149.54  Aligned_cols=98  Identities=27%  Similarity=0.299  Sum_probs=94.3

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK  321 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g  321 (345)
                      ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus        12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~   91 (136)
T 2jab_A           12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG   91 (136)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            56789999997      689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          322 KQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       322 ~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +.+++++|+++|++++.+|..|+|
T Consensus        92 ~~~~v~~Ll~~g~~~~~~~~~g~t  115 (136)
T 2jab_A           92 HLEIAEVLLKHGADVNAQDKFGKT  115 (136)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CHHHHHHHHHcCCCCcCcCCCCCC
Confidence            999999999999999999999987

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.79  E-value=6.2e-19  Score=159.46  Aligned_cols=114  Identities=17%  Similarity=0.161  Sum_probs=96.5

Q ss_pred             HHHHHhCCCCCCCCC--CCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 019158          232 SEFFNSGNYDPPDKK--SDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDI  303 (345)
Q Consensus       232 vklLl~~gadin~~d--~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadi  303 (345)
                      ++.|++.|++++..+  ...|.|+||+|+      ++++|++.|++++.+|..|+||||+||..|+.+++++|+++|+++
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~   80 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV   80 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            356888898887665  145667799887      689999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCC
Q 019158          304 NAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD-EVMWK  345 (345)
Q Consensus       304 n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d-~~G~T  345 (345)
                      +.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+|
T Consensus        81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t  123 (229)
T 2vge_A           81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT  123 (229)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC
Confidence            9999999999999999999999999999999999987 58887

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.79  E-value=9.6e-19  Score=140.57  Aligned_cols=97  Identities=28%  Similarity=0.277  Sum_probs=93.5

Q ss_pred             CCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC
Q 019158          249 GPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK  322 (345)
Q Consensus       249 ~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~  322 (345)
                      .|+||||+|+      ++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            4899999987      6799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCC
Q 019158          323 QAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       323 ~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|+++|++++.+|..|+|
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t  103 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRT  103 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCC
Confidence            99999999999999999999987

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.79  E-value=1.5e-19  Score=152.78  Aligned_cols=129  Identities=12%  Similarity=0.071  Sum_probs=98.2

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCC
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGN  239 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~g  239 (345)
                      ++.|++.|+.+.++ .|+..... +                         ...+..|.||||.|+ .++.+++++|+++|
T Consensus        16 L~~A~~~g~~~~v~-~Ll~~g~~-~-------------------------~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g   67 (156)
T 1bi7_B           16 LATAAARGRVEEVR-ALLEAGAN-P-------------------------NAPNSYGRRPIQVMM-MGSARVAELLLLHG   67 (156)
T ss_dssp             HHHHHHHTCHHHHH-HHHTTTCC-T-------------------------TCCCSSSCCTTTSSC-TTCHHHHHHHHTTT
T ss_pred             HHHHHHcCCHHHHH-HHHHcCCC-C-------------------------CCCCCCCCCHHHHHH-cCCHHHHHHHHHcC
Confidence            46699999999997 77654321 1                         123446899999986 79999999999999


Q ss_pred             CCCCCCCCCCCCC-cchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          240 YDPPDKKSDGPRR-KLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       240 adin~~d~~~G~T-pLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      ++++.++ ..|+| |||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus        68 ~~~~~~d-~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  146 (156)
T 1bi7_B           68 AEPNCAD-PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARID  146 (156)
T ss_dssp             CCCCCCC-TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------
T ss_pred             CCCCCcC-CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCc
Confidence            9999999 99999 999997      689999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q 019158          313 ALHKA  317 (345)
Q Consensus       313 pLh~A  317 (345)
                      |.+-+
T Consensus       147 ~~~~~  151 (156)
T 1bi7_B          147 AAEGP  151 (156)
T ss_dssp             -----
T ss_pred             ccccC
Confidence            98744

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.78  E-value=7.2e-20  Score=173.82  Aligned_cols=114  Identities=18%  Similarity=0.029  Sum_probs=102.6

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCC-CCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCC-
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPD-KKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGE-  289 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~-~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~-  289 (345)
                      +.+++++.++..+++++|++.|+++|. ++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+ 
T Consensus        99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d-~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~  177 (327)
T 1sw6_A           99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVD-EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN  177 (327)
T ss_dssp             -----CHHHHHHHHHHHCTTSCCCSCSCCS-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHH
T ss_pred             chhHHHHHhhHHHHHHHHHhcCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccc
Confidence            446778888889999999999999999 88 99999999997      7899999999999999999999999999998 


Q ss_pred             --HHHHHHHHhCC-CCCcccCCCCCCHHHHHHH----cCCHHHHHHHHHC
Q 019158          290 --FYFVDALLKHN-VDINAVDKDGLTALHKAII----GKKQAVTNYLLRE  332 (345)
Q Consensus       290 --~eiv~~LL~~G-adin~~d~~G~TpLh~Aa~----~g~~eiv~~LL~~  332 (345)
                        .++++.|++++ ++++.+|..|+||||+|+.    .|+.+++++|++.
T Consensus       178 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~  227 (327)
T 1sw6_A          178 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI  227 (327)
T ss_dssp             HHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence              68888888886 7899999999999999999    9999999999987

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.77  E-value=8.9e-19  Score=156.15  Aligned_cols=98  Identities=17%  Similarity=0.065  Sum_probs=94.8

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCHHHHHHHc
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIG  320 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadin~~d~~G~TpLh~Aa~~  320 (345)
                      ..|.||||+|+      ++++|++.|++++.+|..|+||||+||..|+.+++++|+++ |++++.+|..|+||||+|+..
T Consensus        71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~  150 (222)
T 3ehr_A           71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK  150 (222)
T ss_dssp             EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred             cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence            68899999997      68999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          321 KKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       321 g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+.+++++|+++|++++.+|..|+|
T Consensus       151 ~~~~~v~~Ll~~ga~~~~~~~~g~t  175 (222)
T 3ehr_A          151 GYADIVQLLLAKGARTDLRNIEKKL  175 (222)
T ss_dssp             TCHHHHHHHHHHTCCSCCCCTTSCC
T ss_pred             CCHHHHHHHHHcCCCCccccCCCCC
Confidence            9999999999999999999999987

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.77  E-value=7.3e-19  Score=152.62  Aligned_cols=97  Identities=23%  Similarity=0.142  Sum_probs=92.5

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCCHHHHHHHc
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIG  320 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d-~~G~TpLh~Aa~~  320 (345)
                      ..|.||||+|+      ++++|+. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+..
T Consensus        42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~  120 (183)
T 3deo_A           42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  120 (183)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence            47889999987      5788888 99999999999999999999999999999999999999998 8999999999999


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          321 KKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       321 g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+.+++++|+++|++++.+|..|+|
T Consensus       121 ~~~~~v~~Ll~~ga~~~~~d~~g~t  145 (183)
T 3deo_A          121 VRPEVVEALVELGADIEVEDERGLT  145 (183)
T ss_dssp             TCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred             CcHHHHHHHHHcCCCCcCCCCCCCC
Confidence            9999999999999999999999987

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.76  E-value=1.1e-18  Score=139.49  Aligned_cols=102  Identities=16%  Similarity=0.066  Sum_probs=94.7

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..|.||||.|+..++.+++++|+++|++++..+ ..|.||||+|+      ++++|+++|++++.+|..|+||||+|+
T Consensus         5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~   83 (115)
T 2l6b_A            5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARS-KDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK   83 (115)
T ss_dssp             CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCC-SSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            34579999999999999999999999999999999 99999999997      789999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHH
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTAL  314 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpL  314 (345)
                      ..|+.+++++|+++|+++|.++..|.||-
T Consensus        84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           84 KNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            99999999999999999999999999874

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.76  E-value=3.1e-18  Score=132.26  Aligned_cols=87  Identities=20%  Similarity=0.181  Sum_probs=82.2

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      +|+||||.|+..++.+++++|++.|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            37899999999999999999999999999999 99999999997      689999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCC
Q 019158          289 EFYFVDALLKHNVD  302 (345)
Q Consensus       289 ~~eiv~~LL~~Gad  302 (345)
                      +.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           80 HLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999999975

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.76  E-value=1.5e-18  Score=157.97  Aligned_cols=97  Identities=23%  Similarity=0.142  Sum_probs=92.5

Q ss_pred             CCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCCHHHHHHHc
Q 019158          248 DGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVD-KDGLTALHKAIIG  320 (345)
Q Consensus       248 ~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d-~~G~TpLh~Aa~~  320 (345)
                      ..|.||||+|+      ++++|+. |++++.+|..|+||||+||..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~  121 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  121 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence            46799999997      6788888 99999999999999999999999999999999999999998 8899999999999


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          321 KKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       321 g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+.+++++|+++|++++.+|..|+|
T Consensus       122 g~~~~v~~Ll~~ga~~~~~d~~g~t  146 (244)
T 3ui2_A          122 VRPEVVEALVELGADIEVEDERGLT  146 (244)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCc
Confidence            9999999999999999999999987

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.75  E-value=7.2e-19  Score=165.78  Aligned_cols=138  Identities=10%  Similarity=-0.082  Sum_probs=110.9

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhC---CcHHHHHH
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR---GLDDVSEF  234 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~---~~~evvkl  234 (345)
                      ..++.|++.|++..++ .++....+...            .+    . .   ...+..|.||||.|+..   ++.+++++
T Consensus       153 ~~L~~A~~~g~~~~v~-~ll~~g~d~~~------------~~----~-~---~~~~~~g~t~Lh~A~~~~~~~~~~iv~~  211 (301)
T 2b0o_E          153 QRLWTAICNRDLLSVL-EAFANGQDFGQ------------PL----P-G---PDAQAPEELVLHLAVKVANQASLPLVDF  211 (301)
T ss_dssp             HHHHHHHHTTCHHHHH-HHHHTTCCTTS------------CE----E-C---SSSCSCEECHHHHHHHTCCTTTHHHHHH
T ss_pred             HHHhhhhhccCHHHHH-HHHhcCCcccc------------cC----C-C---cccCCCCccHHHHHHHhcccCcHHHHHH
Confidence            4588999999999998 87765443221            00    0 0   11455799999999986   89999999


Q ss_pred             HHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC
Q 019158          235 FNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDK  308 (345)
Q Consensus       235 Ll~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~  308 (345)
                      |+++|++++.+| ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++      
T Consensus       212 Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------  284 (301)
T 2b0o_E          212 IIQNGGHLDAKA-ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------  284 (301)
T ss_dssp             HHHHSSCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------
T ss_pred             HHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------
Confidence            999999999999 99999999997      78999999999999999999999999999999999999999876      


Q ss_pred             CCCCHHHHHHHcCCH
Q 019158          309 DGLTALHKAIIGKKQ  323 (345)
Q Consensus       309 ~G~TpLh~Aa~~g~~  323 (345)
                      .|.||||+|+.+|+.
T Consensus       285 ~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          285 TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             TTSSCCC--------
T ss_pred             CCCChhHHHHhcCCc
Confidence            578999999998864

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.68  E-value=7.6e-17  Score=128.66  Aligned_cols=92  Identities=24%  Similarity=0.243  Sum_probs=77.8

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHHHcCC
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGE  289 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~  289 (345)
                      ......|.|+||.|+..|+.+++++|+++|++++.++                            ..|+||||+|+..|+
T Consensus        18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d----------------------------~~g~tpLh~A~~~~~   69 (110)
T 2zgd_A           18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKD----------------------------KNGSTPLHLAARNGH   69 (110)
T ss_dssp             ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC----------------------------TTCCCHHHHHHHTTC
T ss_pred             cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccC----------------------------CCCCCHHHHHHHcCC
Confidence            4455678888888888888888888888777666555                            457788999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~L  329 (345)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus        70 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           70 LEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence            9999999999999999999999999999999999999987

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.67  E-value=2e-19  Score=175.06  Aligned_cols=148  Identities=14%  Similarity=-0.023  Sum_probs=119.0

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+++.++ .|+........           .            ...+..|.||||.|+..|+.+++++|+++
T Consensus        95 ~Lh~Aa~~G~~e~v~-~Ll~~ga~~~~-----------~------------~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~  150 (376)
T 2aja_A           95 ICFVAAITGCSSALD-TLCLLLTSDEI-----------V------------KVIQAENYQAFRLAAENGHLHVLNRLCEL  150 (376)
T ss_dssp             HHHHHHHHCCHHHHH-HHTTC--CCSS-----------C------------C--CHHHHHHHHHHHHTTCHHHHHHHHHS
T ss_pred             HHHHHHHcCCHHHHH-HHHHcCCcHHH-----------H------------HHhccCCCCHHHHHHHcCCHHHHHHHHhC
Confidence            357799999999998 77655331100           0            11223467899999999999999999999


Q ss_pred             CCCC---CCCCCCCCCCcchHHH------HHHHHHhcCCCCcc--CCCCCCcHHHHHH-HcCCHHHHHHHHhCCCCCccc
Q 019158          239 NYDP---PDKKSDGPRRKLFTKE------EKVLLNKKLPHLAT--ATSKKWLPLHSLA-ASGEFYFVDALLKHNVDINAV  306 (345)
Q Consensus       239 gadi---n~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~--~d~~G~TpLh~Aa-~~g~~eiv~~LL~~Gadin~~  306 (345)
                      |+++   +..+ .. .||||+|+      ++++|+++|++++.  .|..|+||||+|+ ..|+.+++++|+++|++    
T Consensus       151 gad~~~~~i~~-~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----  224 (376)
T 2aja_A          151 APTEIMAMIQA-EN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----  224 (376)
T ss_dssp             CTTTHHHHHSH-HH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----
T ss_pred             CCCccccccCC-CC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----
Confidence            9762   3333 33 89999997      78999999999887  8889999999999 99999999999998742    


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 019158          307 DKDGLTALHKAIIGKKQAVTNYLLRESANPFVV  339 (345)
Q Consensus       307 d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~  339 (345)
                         |.||||+|+..|+.+++++|+++|++++.+
T Consensus       225 ---~~taL~~Aa~~g~~evv~lL~~~ga~~~~~  254 (376)
T 2aja_A          225 ---LAYAEIHEFEYGEKYVNPFIARHVNRLKEM  254 (376)
T ss_dssp             ---HHHHHHCTTTTTTTTHHHHHHHHHHHHHHH
T ss_pred             ---cchHHHHHHHCCCHHHHHHHHhcCcccccc
Confidence               789999999999999999999999876544

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.66  E-value=3e-16  Score=146.10  Aligned_cols=123  Identities=11%  Similarity=-0.049  Sum_probs=105.2

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhC---CcHHHHHH
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR---GLDDVSEF  234 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~---~~~evvkl  234 (345)
                      ..++.|++.|++..++ .++....+...            .+.        .......|.||||.|+..   ++.+++++
T Consensus       132 ~~l~~a~~~~d~~~~~-~ll~~g~~~~~------------~~~--------l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~  190 (278)
T 1dcq_A          132 HSLCEAVKTRDIFGLL-QAYADGVDLTE------------KIP--------LANGHEPDETALHLAVRSVDRTSLHIVDF  190 (278)
T ss_dssp             HHHHHHHHTTCHHHHH-HHHHTTCCTTS------------BCC--------CSSCSSTTCBHHHHHHHHCCTTTHHHHHH
T ss_pred             hhhhhHhhhcccHHHH-HHHHhhcchhh------------hcc--------ccccccCCCCcchHHHHhcccchHHHHHH
Confidence            4578899999999998 77776554322            000        022345699999999988   89999999


Q ss_pred             HHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 019158          235 FNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVD  302 (345)
Q Consensus       235 Ll~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  302 (345)
                      |+++|+++|.+| ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus       191 Ll~~ga~in~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          191 LVQNSGNLDKQT-GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             HHHHCSCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999 99999999997      78999999999999999999999999999999999999999875

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.65  E-value=5.2e-18  Score=165.12  Aligned_cols=118  Identities=10%  Similarity=0.010  Sum_probs=99.7

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCC---CCCCCCCCCCcchHHH------HHHHHHhcCCCC---ccCCCCCCcHHH
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDP---PDKKSDGPRRKLFTKE------EKVLLNKKLPHL---ATATSKKWLPLH  282 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadi---n~~d~~~G~TpLh~Aa------i~~lLl~~gadv---n~~d~~G~TpLh  282 (345)
                      .+.||||.|+..|+.+++++|++.|+..   +..+ ..|.||||+|+      ++++|+++|+++   +..+.. +||||
T Consensus        91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~-~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh  168 (376)
T 2aja_A           91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR  168 (376)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--C-HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred             CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence            4569999999999999999999999832   2334 56789999997      789999999863   333333 89999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCcc--cCCCCCCHHHHHH-HcCCHHHHHHHHHCCC
Q 019158          283 SLAASGEFYFVDALLKHNVDINA--VDKDGLTALHKAI-IGKKQAVTNYLLRESA  334 (345)
Q Consensus       283 ~Aa~~g~~eiv~~LL~~Gadin~--~d~~G~TpLh~Aa-~~g~~eiv~~LL~~Ga  334 (345)
                      +||..|+.+++++|+++|++++.  .|..|.||||+|+ ..|+.+++++|+++|+
T Consensus       169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga  223 (376)
T 2aja_A          169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV  223 (376)
T ss_dssp             HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred             HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence            99999999999999999999887  8899999999999 9999999999998775

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.65  E-value=3.3e-16  Score=151.95  Aligned_cols=153  Identities=13%  Similarity=-0.005  Sum_probs=100.4

Q ss_pred             HHHHHHHh-CCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHh
Q 019158          159 KEYLAYKE-AKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNS  237 (345)
Q Consensus       159 ~~~~a~~~-g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~  237 (345)
                      .++.|++. |+++.++ .|+....+...                        ......|.||||.|+..++.+++++|++
T Consensus       202 ~L~~Aa~~~g~~~~v~-~LL~~Gadvn~------------------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~  256 (368)
T 3jue_A          202 LLFRASGHPPSLPTMA-DALAHGADVNW------------------------VNGGQDNATPLIQATAANSLLACEFLLQ  256 (368)
T ss_dssp             HHHHHTSSSCCHHHHH-HHHHTTCCTTC------------------------CCTTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHccCCHHHHH-HHHHcCCCCCc------------------------cccccCCCCHHHHHHHCCCHHHHHHHHH
Confidence            56778888 9999997 77765432111                        1123568999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCCcccCC
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHN---VDINAVDK  308 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G---adin~~d~  308 (345)
                      +|++++..| ..|+||||+|+      ++++|+.+|++++.+|..|+||||+|+..|+.+++++|+..+   ++....+.
T Consensus       257 ~Gadvn~~d-~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~  335 (368)
T 3jue_A          257 NGANVNQAD-SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA  335 (368)
T ss_dssp             TTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------
T ss_pred             cCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCC
Confidence            999999999 99999999997      689999999999999999999999999999999999999775   34445667


Q ss_pred             CCCCHHHHHHHcCC--HHHHHHHHHCCCCCC
Q 019158          309 DGLTALHKAIIGKK--QAVTNYLLRESANPF  337 (345)
Q Consensus       309 ~G~TpLh~Aa~~g~--~eiv~~LL~~Gad~n  337 (345)
                      .+.|+++++.....  .+-.+.|...+.+++
T Consensus       336 ~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~  366 (368)
T 3jue_A          336 GDETYLDIFRDFSLMASDDPEKLSRRSHDLH  366 (368)
T ss_dssp             -------------------------------
T ss_pred             CCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence            88899998876653  344566666666654

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.56  E-value=7.6e-15  Score=116.93  Aligned_cols=63  Identities=10%  Similarity=0.067  Sum_probs=50.6

Q ss_pred             CCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          206 SSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       206 ~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .......+..|.||||.|+..++.+++++|+++|++++.++                            ..|+||||+|+
T Consensus        47 g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d----------------------------~~g~tpl~~A~   98 (110)
T 2zgd_A           47 GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD----------------------------KFGKTAFDISI   98 (110)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------------------------TTSCCHHHHHH
T ss_pred             CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc----------------------------cCCCcHHHHHH
Confidence            33334556789999999999999999999998887776665                            45678888999


Q ss_pred             HcCCHHHHHHH
Q 019158          286 ASGEFYFVDAL  296 (345)
Q Consensus       286 ~~g~~eiv~~L  296 (345)
                      ..|+.+++++|
T Consensus        99 ~~~~~~~~~~L  109 (110)
T 2zgd_A           99 DNGNEDLAEIL  109 (110)
T ss_dssp             HHTCHHHHHHH
T ss_pred             HcCCHHHHHHh
Confidence            99999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	345
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-10
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	9e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-09
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-05
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-04
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	8e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.004
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-06
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-04

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 2e-10
 Identities = 17/62 (27%), Positives = 22/62 (35%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
           PLH  +  G    V  LL+     N  +    T LH A       V  YLL+  A     
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62

Query: 340 DE 341
            +
Sbjct: 63  AK 64

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 1e-09
 Identities = 21/71 (29%), Positives = 28/71 (39%)

Query: 274 TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES 333
             K   PLH  A +G       LL++   +NA  KD  T LH A       +   LL  +
Sbjct: 30  NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 89

Query: 334 ANPFVVDEVMW 344
           ANP +      
Sbjct: 90  ANPNLATTAGH 100

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 9e-09
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 274 TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL---L 330
           T   + PLH  A  G    V  LLK+    N V  DG T L  A      +VT+ L    
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 386

Query: 331 RESANPFVVD 340
            E++   V D
Sbjct: 387 DETSFVLVSD 396

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 1e-06
 Identities = 22/76 (28%), Positives = 32/76 (42%)

Query: 269 HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNY 328
             A  T K + PLH  A  G+    + LL+ +   NA  K+GLT LH A+      +   
Sbjct: 124 SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 183

Query: 329 LLRESANPFVVDEVMW 344
           LL    +P       +
Sbjct: 184 LLPRGGSPHSPAWNGY 199

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 3e-06
 Identities = 24/80 (30%), Positives = 35/80 (43%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
           +L K    +   T   + PLH  +  G    V  LL+H  D+NA  K G + LH+A    
Sbjct: 282 VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 341

Query: 322 KQAVTNYLLRESANPFVVDE 341
              +   LL+  A+P  V  
Sbjct: 342 HTDIVTLLLKNGASPNEVSS 361

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 6e-06
 Identities = 28/128 (21%), Positives = 40/128 (31%), Gaps = 4/128 (3%)

Query: 221 WAVYGRGLDDVSEFFNSG-NYDPPDKKSDGP---RRKLFTKEEKVLLNKKLPHLATATSK 276
            AV+   LD V      G +   P      P     K    E    L +        + +
Sbjct: 171 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230

Query: 277 KWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              PLH  A  G    V  LL    + N  +K GLT LH         V + L++     
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290

Query: 337 FVVDEVMW 344
                + +
Sbjct: 291 DATTRMGY 298

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 8e-05
 Identities = 18/83 (21%), Positives = 26/83 (31%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
           LL ++  H   A      PLH          V  LL      ++   +G T LH A    
Sbjct: 150 LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 209

Query: 322 KQAVTNYLLRESANPFVVDEVMW 344
           +  V   LL+   +         
Sbjct: 210 QVEVARSLLQYGGSANAESVQGV 232

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.7 bits (135), Expect = 9e-10
 Identities = 12/58 (20%), Positives = 18/58 (31%)

Query: 274 TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR 331
                 P+   A  G    V  L++    + AVD    TA   A       + +   R
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 45.1 bits (105), Expect = 5e-06
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 279 LPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV 338
           + LH+  A+G +   + + + +V+I    +   T LH          +  L+   A   +
Sbjct: 4   IKLHT-EAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 1e-09
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 274 TSKKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
             +   PL           V  LL+   ++IN  D DG TAL  A+  K + +   L + 
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

Query: 333 SANPFVVD 340
            A+    D
Sbjct: 276 GASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKD-GLTALHKAIIGKKQAVTNYLLRESANPFV 338
            L     + +   V  LL+   ++N  +++ G T LH A+   ++ +   LLR  A+P +
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 339 VDEVMW 344
             +   
Sbjct: 68  RKKNGA 73

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 296 LLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL-RESANPFVVDE 341
           LL H  D+N   + G T L  A+  K   +   LL +E       D 
Sbjct: 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 251

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (118), Expect = 1e-07
 Identities = 14/57 (24%), Positives = 20/57 (35%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
             PLH    +     ++ LLK   D  A    G T L  A++     +   L    A
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (100), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 303 INAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE 341
              V +DG TALH A+I + +   ++LL  SA    +D 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL 40

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (99), Expect = 3e-05
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVD---INAVDKDGLTALHKAII 319
              LH         F+D LL  +     ++  +  G TALH A I
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI 54

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 48.7 bits (115), Expect = 4e-07
 Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 5/126 (3%)

Query: 224 YGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKK--LPHLATATSKKWLPL 281
               L  +S       + P  K  +  R+ L         N K           K  +  
Sbjct: 35  NELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVIC 94

Query: 282 HSLAASGEFYFVD---ALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV 338
              A +G    +D    LL  +  +  +  +   A   A       V N L   +    +
Sbjct: 95  FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 154

Query: 339 VDEVMW 344
                 
Sbjct: 155 AMIQAE 160

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.6 bits (114), Expect = 4e-07
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
           W PLH+ A  G+      L+++  D+ AV+K G TA   A     + +  YL 
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA----DEDILGYLE 281

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 20/79 (25%), Positives = 30/79 (37%)

Query: 263 LNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK 322
           LN    +           LH  AA G    +  L++   D+N  D DG T LH A    K
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244

Query: 323 QAVTNYLLRESANPFVVDE 341
           +     L+    +   V++
Sbjct: 245 EEACRILVENLCDMEAVNK 263

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.9 bits (94), Expect = 1e-04
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNY 328
              +  +SG+   V  LL+   DIN  + DGLTALH+A I     +  +
Sbjct: 43  VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF 91

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI 318
              L+  A  G    VDALL +  D    +K GL  +    
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.7 bits (104), Expect = 7e-06
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 256 TKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINA-VDKDGLTAL 314
            +    L N      +   S      H    S      DA     +++N  VD+ G T L
Sbjct: 52  QEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPL 111

Query: 315 HKAIIGKKQAVTNYLLRESANPFVVDEVMW 344
           H         +  +L++  +N    D +  
Sbjct: 112 HWLTSIANLELVKHLVKHGSNRLYGDNMGE 141

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.7 bits (104), Expect = 8e-06
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV---DINAVDKDGLTALHKAI 318
           ++ K+   + + T++K    +      +   ++ L    +    +NA D +G T L+ A 
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267

Query: 319 IGKKQAVTNYLLRESANPFVVD 340
                ++ + LL   A+PF+ +
Sbjct: 268 RLGNISIVDALLDYGADPFIAN 289

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 18/83 (21%), Positives = 29/83 (34%)

Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
            L  K   +         PLH  A+         LL+   + +A D    TA+H+A    
Sbjct: 88  ALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG 147

Query: 322 KQAVTNYLLRESANPFVVDEVMW 344
              + + LL   A+  + D    
Sbjct: 148 NLKMIHILLYYKASTNIQDTEGN 170

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 1e-05
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 263 LNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKK 322
           L           ++   PLH             L+     I   +K+  T L  A  G  
Sbjct: 155 LLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLG 214

Query: 323 QAVTNYLL 330
             +   ++
Sbjct: 215 -LILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 279 LPLHSLAASGEFYFV-DALLKHNVDINAVDKDGLTALHKAII 319
           L + +LA SG+   + +++L         D+D  TALH A  
Sbjct: 5   LMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACS 46

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 7e-05
 Identities = 24/67 (35%), Positives = 32/67 (47%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
           W PLH  A++G    V ALL     +NAV+++G T LH A    +  +   LL   ANP 
Sbjct: 71  WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 130

Query: 338 VVDEVMW 344
             D    
Sbjct: 131 AKDHYEA 137

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
              +H  AA G    +  LL +    N  D +G T LH A   ++      L+ + A+ +
Sbjct: 137 ATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIY 196

Query: 338 VVDE 341
           + ++
Sbjct: 197 IENK 200

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.2 bits (105), Expect = 4e-06
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 280 PLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAI 318
           PLH      EF+ V  LL      +   D+DG   LH ++
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSV 42

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 5e-06
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 268 PHLATATSKKWLPLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALHKAIIGKKQAVT 326
             +     + W PL    A G       L+ K+  + + VD  G  A   A+    + V 
Sbjct: 163 SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVK 219

Query: 327 NYLLRESAN 335
            + L    +
Sbjct: 220 KFFLNNVVD 228

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 4e-06
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI 318
              LHS +  G    V  L++   D +  +    T L  A 
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 3e-05
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 4/44 (9%)

Query: 278 WLPLHSLAASGEFYFVDALLK----HNVDINAVDKDGLTALHKA 317
             PLH     G    V  L+        +++  +    T LH A
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.4 bits (103), Expect = 5e-06
 Identities = 10/52 (19%), Positives = 14/52 (26%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL 329
             PL   A  G +    ALL +  +    D         A       +   L
Sbjct: 157 ETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 293 VDALLKHNVDINA-VDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMW 344
           +  LL    ++NA +DK G T+LH A    +      LL   A+    D    
Sbjct: 5   ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGR 57

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (98), Expect = 3e-05
 Identities = 11/59 (18%), Positives = 16/59 (27%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
              LH          V  LLK   D+N V   G +            +   L + +   
Sbjct: 146 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 1e-04
 Identities = 8/42 (19%), Positives = 12/42 (28%), Gaps = 4/42 (9%)

Query: 280 PLHSLAASGEF----YFVDALLKHNVDINAVDKDGLTALHKA 317
            LH      E       +  +      +N  +    T LH A
Sbjct: 5   FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.9 bits (86), Expect = 4e-04
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL 329
              LH          V+ L+K+  D++   K   TA   +I    + +   L
Sbjct: 101 MTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 299 HNVDINAVDKDGLTALHKAIIGKKQAVTNYLL 330
              D++  D  GLT L  A+    Q + + L 
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (85), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDG 310
            L S AA G+   + +LL++NV++NA +  G
Sbjct: 4   ELASAAARGDLEQLTSLLQNNVNVNAQNGFG 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	345
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.93
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.91
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.9
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.9
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.9
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.9
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.9
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.88
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.87
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.87
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.87
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.87
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.86
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.86
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.86
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.86
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.85
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.85
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.85
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.84
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.84
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.83
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.83
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.77
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.77
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.75
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.74
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.74
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.71
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.64
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.55

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-25  Score=197.97  Aligned_cols=167  Identities=14%  Similarity=0.103  Sum_probs=148.4

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .++..|++|+       +.|+..|+.+.++ .++.......                          .....+.++++.+
T Consensus        32 ~~D~~G~TpL-------h~Aa~~g~~e~~~-~l~~~~~~~~--------------------------~~~~~~~~~~~~~   77 (223)
T d1uoha_          32 RTDQDSRTAL-------HWACSAGHTEIVE-FLLQLGVPVN--------------------------DKDDAGWSPLHIA   77 (223)
T ss_dssp             CCCTTSCCHH-------HHHHHHTCHHHHH-HHHHHTCCSC--------------------------CCCTTCCCHHHHH
T ss_pred             CcCCCCCCHH-------HHHHHhhhhcccc-cccccccccc--------------------------ccccccccccccc
Confidence            5677899997       4477899998886 5554433211                          1233567889899


Q ss_pred             HhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 019158          224 YGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALL  297 (345)
Q Consensus       224 ~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL  297 (345)
                      +..++.+++++|+++|++++.++ ..|.||||+|+      ++++|+++|++++.++..|.||||+|+..++.+++++|+
T Consensus        78 ~~~~~~~i~~~Ll~~~~d~~~~d-~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~  156 (223)
T d1uoha_          78 ASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILL  156 (223)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             ccccccchhHHHhccCceeEeeC-CCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhc
Confidence            98999999999999999999999 99999999986      789999999999999999999999999999999999999


Q ss_pred             hCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          298 KHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       298 ~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+|.+++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+|
T Consensus       157 ~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~t  204 (223)
T d1uoha_         157 YYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT  204 (223)
T ss_dssp             HTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             cccceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999997

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=9.2e-24  Score=186.19  Aligned_cols=160  Identities=18%  Similarity=0.144  Sum_probs=141.3

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|++.|+.+.++ .|+..++..+.                         ..+..|+||||.|+..|+.+++++|+++
T Consensus         3 pLh~A~~~g~~~~v~-~Ll~~~~~~~~-------------------------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~   56 (229)
T d1ixva_           3 PLHQACMENEFFKVQ-ELLHSKPSLLL-------------------------QKDQDGRIPLHWSVSFQAHEITSFLLSK   56 (229)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHHCGGGTT-------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             hHHHHHHcCCHHHHH-HHHHcCCCccc-------------------------ccCCCCCCHHHHHHHcCCccccchhhhh
Confidence            357799999999999 99887775443                         2445799999999999999999999999


Q ss_pred             CCCCCCC---CCCCCCCcchHHH-----------------------------------------HHHHHHhcCCCCccCC
Q 019158          239 NYDPPDK---KSDGPRRKLFTKE-----------------------------------------EKVLLNKKLPHLATAT  274 (345)
Q Consensus       239 gadin~~---d~~~G~TpLh~Aa-----------------------------------------i~~lLl~~gadvn~~d  274 (345)
                      |++++..   + ..|.+++|++.                                         +..+|+..|.+.+.++
T Consensus        57 ga~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  135 (229)
T d1ixva_          57 MENVNLDDYPD-DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKD  135 (229)
T ss_dssp             CTTCCGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred             hcccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccC
Confidence            9998754   5 67889998653                                         2377888999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Q 019158          275 SKKWLPLHSLAASGEFYFVDALLKHN-VDINAVDKDGLTALHKAIIGKKQAVTNYLLR-ESANPFVVDEVMWK  345 (345)
Q Consensus       275 ~~G~TpLh~Aa~~g~~eiv~~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~-~Gad~n~~d~~G~T  345 (345)
                      ..|+||||+|+..|+.+++++|+++| .+++.+|.+|+||||+|+..|+.+++++|++ .|+|++++|..|+|
T Consensus       136 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t  208 (229)
T d1ixva_         136 KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK  208 (229)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCC
T ss_pred             CCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCC
Confidence            99999999999999999999999997 7899999999999999999999999999997 59999999999987

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.90  E-value=3.9e-23  Score=188.62  Aligned_cols=160  Identities=17%  Similarity=0.096  Sum_probs=136.8

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHh
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNS  237 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~  237 (345)
                      ..++.|+..|+++.++ .|+....+ +                         +..+..|.||||.|+.+|+.+++++|++
T Consensus        42 t~l~~A~~~G~~~~v~-~Ll~~Gad-v-------------------------n~~d~~G~T~L~~A~~~g~~eiv~~Ll~   94 (291)
T d1s70b_          42 AVFLAACSSGDTEEVL-RLLERGAD-I-------------------------NYANVDGLTALHQACIDDNVDMVKFLVE   94 (291)
T ss_dssp             HHHHHHHHHTCHHHHH-HHHHHCCC-T-------------------------TCBCTTCCBHHHHHHHTTCHHHHHHHHH
T ss_pred             hHHHHHHHcCCHHHHH-HHHHCCCC-C-------------------------CccCCCCCcHHHHHHhcCCceeeeeecc
Confidence            4589999999999998 88875432 1                         2244568999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCcc---------------------------------------
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLAT---------------------------------------  272 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~---------------------------------------  272 (345)
                      +|++.+..+ ..+.+|||+++      +++.|+.+|+..+.                                       
T Consensus        95 ~~~~~~~~~-~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~  173 (291)
T d1s70b_          95 NGANINQPD-NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEE  173 (291)
T ss_dssp             TTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             ccccccccc-ccccccccccccccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccc
Confidence            999998888 88999999775      34555555544433                                       


Q ss_pred             ---------------------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 019158          273 ---------------------ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR  331 (345)
Q Consensus       273 ---------------------~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~  331 (345)
                                           .+..|.||||+|+..|+.+++++|+++|+++|.++..|+||||+|+..|+.++|++|++
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~  253 (291)
T d1s70b_         174 ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE  253 (291)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             cccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence                                 34568899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 019158          332 ESANPFVVDEVMWK  345 (345)
Q Consensus       332 ~Gad~n~~d~~G~T  345 (345)
                      +|||++++|..|+|
T Consensus       254 ~Gadv~~~d~~G~T  267 (291)
T d1s70b_         254 NLCDMEAVNKVGQT  267 (291)
T ss_dssp             TTCCTTCCCTTSCC
T ss_pred             CCCCCCCcCCCCCC
Confidence            99999999999987

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-23  Score=185.48  Aligned_cols=161  Identities=19%  Similarity=0.129  Sum_probs=148.6

Q ss_pred             HHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHh
Q 019158          158 LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNS  237 (345)
Q Consensus       158 ~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~  237 (345)
                      +-++.++++|+++.++ +++..++..+.                         ..+..|+||||.|+..|+.+++++|+.
T Consensus         5 ~~~~~~a~~G~~~~v~-~~l~~~~~~~~-------------------------~~D~~G~TpLh~Aa~~g~~e~~~~l~~   58 (223)
T d1uoha_           5 LMVCNLAYSGKLEELK-ESILADKSLAT-------------------------RTDQDSRTALHWACSAGHTEIVEFLLQ   58 (223)
T ss_dssp             SHHHHHHHTTCHHHHH-HHHHHCGGGGG-------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred             HHHHHHHHhCCHHHHH-HHHHhCCCcCc-------------------------CcCCCCCCHHHHHHHhhhhcccccccc
Confidence            4578899999999999 99988775443                         245579999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC
Q 019158          238 GNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL  311 (345)
Q Consensus       238 ~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~  311 (345)
                      .+.+....+ ..+.++++.++      ++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.
T Consensus        59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~  137 (223)
T d1uoha_          59 LGVPVNDKD-DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA  137 (223)
T ss_dssp             HTCCSCCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             ccccccccc-ccccccccccccccccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence            999998888 88999999775      68999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||||+|+..++.+++++|+..|++++.+|..|+|
T Consensus       138 t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~T  171 (223)
T d1uoha_         138 TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNT  171 (223)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred             ccchhhhhcCCcchhhhhccccceeeeccCCCCc
Confidence            9999999999999999999999999999999987

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-23  Score=174.56  Aligned_cols=145  Identities=14%  Similarity=0.094  Sum_probs=130.2

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .++.|+..|+++.++ .|+...+..+.                         ..+..|.||||+|+. ++.++++.|+++
T Consensus         5 ~L~~Aa~~g~~~~vk-~lL~~~~~~~n-------------------------~~d~~g~t~L~~A~~-~~~~~v~~Ll~~   57 (156)
T d1bd8a_           5 RLSGAAARGDVQEVR-RLLHRELVHPD-------------------------ALNRFGKTALQVMMF-GSTAIALELLKQ   57 (156)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHTTCCCTT-------------------------CCCTTSCCHHHHSCT-TCHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHH-HHHHhCCCCCC-------------------------ccCCCCCcccccccc-cccccccccccc
Confidence            478899999999999 88876554332                         234578999999876 778999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      +.+++..+ ..|.+|+++++      ++++++++|++++.+|..|+||||+||..|+.+++++|+ .|++++.+|.+|+|
T Consensus        58 ~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~T  135 (156)
T d1bd8a_          58 GASPNVQD-TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLT  135 (156)
T ss_dssp             TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCC
T ss_pred             cccccccc-cccccccccccccccccccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCC
Confidence            99999999 99999999886      679999999999999999999999999999999999887 68999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHC
Q 019158          313 ALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~LL~~  332 (345)
                      |||+|+..|+.+|+++|++|
T Consensus       136 pL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         136 PLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHcCCHHHHHHHHhh
Confidence            99999999999999999976

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1e-23  Score=188.95  Aligned_cols=167  Identities=18%  Similarity=0.051  Sum_probs=126.3

Q ss_pred             hcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhC
Q 019158          147 KQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGR  226 (345)
Q Consensus       147 ~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~  226 (345)
                      +.|.+|+       ..|++.|+.+.++ .|+........           +            ...+..|.||||.|+..
T Consensus         7 ~~G~t~L-------h~A~~~~~~~~v~-~Ll~~~a~~~~-----------i------------~~~~~~g~TpL~~A~~~   55 (255)
T d1oy3d_           7 EDGDTAL-------HLAVIHQHEPFLD-FLLGFSAGHEY-----------L------------DLQNDLGQTALHLAAIL   55 (255)
T ss_dssp             TTCCCHH-------HHHHHTTCHHHHH-HHHHHHTTSGG-----------G------------GCCCTTSCCHHHHHHHH
T ss_pred             cCCCCHH-------HHHHHcCCHHHHH-HHHHcCCCccc-----------c------------cCcCCCCCCccchHHhh
Confidence            4677777       4488899988887 66654222110           0            22455689999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHh-----------------------------------
Q 019158          227 GLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNK-----------------------------------  265 (345)
Q Consensus       227 ~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~-----------------------------------  265 (345)
                      |+.+++++|+++|++++.++ ..|.||||+|+      ++++|+.                                   
T Consensus        56 g~~~iv~~Ll~~ga~i~~~d-~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (255)
T d1oy3d_          56 GEASTVEKLYAAGAGVLVAE-RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP  134 (255)
T ss_dssp             TCHHHHHHHHHTTCCSSCCC-TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------
T ss_pred             cccccccccccccccccccc-cccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhc
Confidence            99999999999999999999 99999999874      2222222                                   


Q ss_pred             ------------cCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 019158          266 ------------KLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINA-VDKDGLTALHKAIIGKKQAVTNYLLRE  332 (345)
Q Consensus       266 ------------~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~-~d~~G~TpLh~Aa~~g~~eiv~~LL~~  332 (345)
                                  .+.+++.++..|+||||+||..|+.+++++|++++++++. ++..|.||||+|+..|+.+++++|+++
T Consensus       135 ~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~  214 (255)
T d1oy3d_         135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA  214 (255)
T ss_dssp             ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             chhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHC
Confidence                        1334455677788888888888888888888888877764 456788888888888888888888888


Q ss_pred             CCCCCCCCCCCCC
Q 019158          333 SANPFVVDEVMWK  345 (345)
Q Consensus       333 Gad~n~~d~~G~T  345 (345)
                      |++++.+|..|+|
T Consensus       215 gadin~~d~~g~t  227 (255)
T d1oy3d_         215 GADPTARMYGGRT  227 (255)
T ss_dssp             TCCTTCCCTTSCC
T ss_pred             CCCCCCCCCCCCC
Confidence            8888888888876

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.5e-24  Score=172.50  Aligned_cols=115  Identities=17%  Similarity=0.084  Sum_probs=108.4

Q ss_pred             CCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHH-----HHHHHHHhcCCCCccCCCCCC-cHHHHHHHcCC
Q 019158          216 PKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTK-----EEKVLLNKKLPHLATATSKKW-LPLHSLAASGE  289 (345)
Q Consensus       216 g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~A-----ai~~lLl~~gadvn~~d~~G~-TpLh~Aa~~g~  289 (345)
                      +.++||.|+..|+.+++++|+++|++++.++ ..|.|+||+|     .++++|+++|++++.++..|. ||||+|+..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~-~~g~t~l~~a~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPN-SYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-SSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCcccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4578999999999999999999999999999 9999999966     388999999999999998876 69999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 019158          290 FYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLR  331 (345)
Q Consensus       290 ~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~  331 (345)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+.
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999975

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.8e-22  Score=176.08  Aligned_cols=167  Identities=17%  Similarity=0.102  Sum_probs=135.2

Q ss_pred             cCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCC
Q 019158          148 QGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRG  227 (345)
Q Consensus       148 ~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~  227 (345)
                      .|.+|||.       |+..|+.+.+. .++...+....                      ..+..+..|+||||.|+..+
T Consensus         1 dG~t~Lh~-------A~~~g~~~~~~-~li~~~~~~~~----------------------~in~~d~~g~TpLh~A~~~~   50 (221)
T d1iknd_           1 DGDSFLHL-------AIIHEEKALTM-EVIRQVKGDLA----------------------FLNFQNNLQQTPLHLAVITN   50 (221)
T ss_dssp             CCCCTTHH-------HHHTTCSSSSS-CCCC-----CC----------------------CCCCCCTTCCCHHHHHHHTT
T ss_pred             CCChHHHH-------HHHcCCHHHHH-HHHHHHHhCCC----------------------CcccCCCCCCcccccccccc
Confidence            37788843       77788877766 55543322110                      01335567999999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCc------cCCCCCCcHHHHHHHcCCHHHHHH
Q 019158          228 LDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLA------TATSKKWLPLHSLAASGEFYFVDA  295 (345)
Q Consensus       228 ~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn------~~d~~G~TpLh~Aa~~g~~eiv~~  295 (345)
                      +.+++++|++.|++++..+ ..|.||||+++      +++.|+..+....      .....|.||||+|+..++.+++.+
T Consensus        51 ~~~iv~~L~~~g~d~~~~d-~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~  129 (221)
T d1iknd_          51 QPEIAEALLGAGCDPELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVEL  129 (221)
T ss_dssp             CHHHHHCCCSCCCCSCCCC-TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             ccccccccccccccccccc-cccccccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheee
Confidence            9999999999999999999 99999999886      4678887765533      234568999999999999999999


Q ss_pred             HHhCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          296 LLKHNVDINAVD-KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       296 LL~~Gadin~~d-~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      |+..|+.++..+ .+|+||||+|+..|+.+++++|+++|+|++.+|.+|+|
T Consensus       130 l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~t  180 (221)
T d1iknd_         130 LVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS  180 (221)
T ss_dssp             HHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCC
T ss_pred             ecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCC
Confidence            999999888765 57999999999999999999999999999999999987

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.87  E-value=2.8e-22  Score=180.73  Aligned_cols=135  Identities=19%  Similarity=0.179  Sum_probs=96.6

Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH------HH----------------------
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEE------KV----------------------  261 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai------~~----------------------  261 (345)
                      +..+..|+||||.|+..|+.+++++|+++|++++.++ ..|.|||++|..      ..                      
T Consensus        68 n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~-~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  146 (277)
T d2fo1e1          68 NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA  146 (277)
T ss_dssp             TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred             cccCCCCCeeecccccccccccccccccccccccccc-ccccccccchhhhcchhhhhhhhhcccccccccccccccchh
Confidence            4455678888888888888888888888888888888 888888887751      10                      


Q ss_pred             -----------------HHHhcC--------CCCccCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCcccCCCCCCHHH
Q 019158          262 -----------------LLNKKL--------PHLATATSKKWLPLHSLAASGEFYFVDALL-KHNVDINAVDKDGLTALH  315 (345)
Q Consensus       262 -----------------lLl~~g--------advn~~d~~G~TpLh~Aa~~g~~eiv~~LL-~~Gadin~~d~~G~TpLh  315 (345)
                                       ++....        ...+..+..|+||||+++..++.+++++++ ..+.+++.+|..|+||||
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~  226 (277)
T d2fo1e1         147 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM  226 (277)
T ss_dssp             HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred             HHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHHH
Confidence                             011110        111223445677777777777777776544 566777778888888888


Q ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          316 KAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       316 ~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +|+..|+.+++++|+++|+|++.+|..|+|
T Consensus       227 ~A~~~g~~~iv~~Ll~~gadin~~d~~G~T  256 (277)
T d2fo1e1         227 LAAQEGRIEVVMYLIQQGASVEAVDATDHT  256 (277)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSSCCCSSSCC
T ss_pred             HHHHcCCHHHHHHHHHCcCCCCCcCCCCCC
Confidence            888888888888888888888888888876

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.5e-23  Score=167.73  Aligned_cols=100  Identities=22%  Similarity=0.161  Sum_probs=94.0

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHH
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFY  291 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~e  291 (345)
                      |||+.|+..|+.+++++|+++|++++.++ ..|+||||+|+      ++++|+.+|++++.+|..|+||||+|+.+|+.+
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~-~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTL-EGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCS-SSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhcccccc-ccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            78988999999999999999999999999 99999999987      678999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCcccCCCCCCHHHHHH
Q 019158          292 FVDALLKHNVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       292 iv~~LL~~Gadin~~d~~G~TpLh~Aa  318 (345)
                      ++++|+++|++++.+|.+|.||||+|.
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhcccccceeeCCCCCCHHHHHh
Confidence            999999999999999999999999884

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=4.9e-22  Score=177.79  Aligned_cols=157  Identities=15%  Similarity=0.061  Sum_probs=130.5

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHH
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAV  223 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA  223 (345)
                      .+...|.+|+       +-|+..|+.+.++ .|+....+ +                         ...+..|.||++.|
T Consensus        40 ~~~~~g~TpL-------~~A~~~g~~~iv~-~Ll~~ga~-i-------------------------~~~d~~g~tpL~~A   85 (255)
T d1oy3d_          40 LQNDLGQTAL-------HLAAILGEASTVE-KLYAAGAG-V-------------------------LVAERGGHTALHLA   85 (255)
T ss_dssp             CCCTTSCCHH-------HHHHHHTCHHHHH-HHHHTTCC-S-------------------------SCCCTTSCCHHHHH
T ss_pred             CcCCCCCCcc-------chHHhhccccccc-cccccccc-c-------------------------cccccccchhhhhh
Confidence            4456788887       4488899999887 66654321 1                         22445789999999


Q ss_pred             HhCCcHHHHHHHHhCCC-----------------------------------------------CCCCCCCCCCCCcchH
Q 019158          224 YGRGLDDVSEFFNSGNY-----------------------------------------------DPPDKKSDGPRRKLFT  256 (345)
Q Consensus       224 ~~~~~~evvklLl~~ga-----------------------------------------------din~~d~~~G~TpLh~  256 (345)
                      +..++.+++++|++.+.                                               +++.++ ..|.||||+
T Consensus        86 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~g~TpLh~  164 (255)
T d1oy3d_          86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN-YDGHTPLHV  164 (255)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCC-TTSCCHHHH
T ss_pred             hccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCccccccc-ccCcccccc
Confidence            99999999988865432                                               223455 789999999


Q ss_pred             HH------HHHHHHhcCCCCccC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Q 019158          257 KE------EKVLLNKKLPHLATA-TSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       257 Aa------i~~lLl~~gadvn~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~L  329 (345)
                      |+      ++++|++++++.+.. +..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|
T Consensus       165 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~L  244 (255)
T d1oy3d_         165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL  244 (255)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred             cccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence            87      689999999998865 67899999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCC
Q 019158          330 LRESAN  335 (345)
Q Consensus       330 L~~Gad  335 (345)
                      +++||+
T Consensus       245 l~~Ga~  250 (255)
T d1oy3d_         245 RAHGAP  250 (255)
T ss_dssp             HHTTCC
T ss_pred             HHcCCC
Confidence            999997

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.7e-21  Score=167.26  Aligned_cols=130  Identities=17%  Similarity=0.075  Sum_probs=112.6

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHH----hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC----------
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFN----SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT----------  274 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl----~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d----------  274 (345)
                      +|.||||.|+..|+.++++.|+    +.|++++.+| ..|+||||+|+      ++++|+++|++++..+          
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d-~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccC-CCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            4788888888888888877766    4788888888 88888888875      5677777777765532          


Q ss_pred             -------------------------------------------------------------CCCCcHHHHHHHcCCHHHH
Q 019158          275 -------------------------------------------------------------SKKWLPLHSLAASGEFYFV  293 (345)
Q Consensus       275 -------------------------------------------------------------~~G~TpLh~Aa~~g~~eiv  293 (345)
                                                                                   ..|.++|++|+..+...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  160 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV  160 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred             cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhh
Confidence                                                                         2378899999999999999


Q ss_pred             HHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          294 DALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       294 ~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++++++|.+++.+|..|.||||+|+..|+.+++++|+++|+|++++|.+|+|
T Consensus       161 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~T  212 (228)
T d1k1aa_         161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT  212 (228)
T ss_dssp             HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             hhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999997

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.2e-21  Score=162.99  Aligned_cols=146  Identities=17%  Similarity=0.145  Sum_probs=129.8

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .+..|+..|+++.++ .|+....+ +                         ...+..|.||||+|+ .++.+++++|+++
T Consensus         4 ~Lh~Aa~~g~~~~v~-~Ll~~g~d-~-------------------------n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~   55 (156)
T d1ihba_           4 ELASAAARGDLEQLT-SLLQNNVN-V-------------------------NAQNGFGRTALQVMK-LGNPEIARRLLLR   55 (156)
T ss_dssp             HHHHHHHHTCHHHHH-HHTTSCCC-T-------------------------TCCCTTSCCHHHHCC-SSCHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHH-HHHHCCCC-c-------------------------CccCCcccccccccc-ccccccccccccc
Confidence            356789999999998 77765432 1                         224457999999887 5889999999999


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCcccCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV-DINAVDKDGL  311 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga-din~~d~~G~  311 (345)
                      |++++..+ ..|.++++.++      ....|+..+.+++..+..|.+|||+|+..++.+++++|+++|+ +++.+|..|.
T Consensus        56 ~a~~~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~  134 (156)
T d1ihba_          56 GANPDLKD-RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD  134 (156)
T ss_dssp             TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred             cccccccc-ccCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCC
Confidence            99999999 99999999876      5688999999999999999999999999999999999999885 8999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                      ||||+|+..|+.+++++|+++|
T Consensus       135 TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         135 TACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CHHHHHHHcCCHHHHHHHHhcC
Confidence            9999999999999999999987

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.86  E-value=3.1e-22  Score=180.51  Aligned_cols=176  Identities=12%  Similarity=0.080  Sum_probs=130.3

Q ss_pred             hcCCCCCCcCCHHHHHHHHhCCccccCchhhhc-------CCCCCCCCccCcccc----------cccCcccccCCCCCC
Q 019158          147 KQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLD-------KPSTFPTDAKESEED----------RDCGFQDFVNSSSST  209 (345)
Q Consensus       147 ~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~-------~p~~~~~~~~~~e~~----------~~~~f~~~v~~~~~~  209 (345)
                      +.|.+|||.       |+..|+.+.++ .|+..       ....+......+.++          +.++++-  ...+..
T Consensus        31 ~~g~T~Lh~-------A~~~g~~~~v~-~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll--~~Gad~  100 (277)
T d2fo1e1          31 RHNRTVLHW-------IASNSSAEKSE-DLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM--KAGADP  100 (277)
T ss_dssp             SSCCCHHHH-------HHCTTCCSCCT-THHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH--HTTCCS
T ss_pred             CCCccHHHH-------HHHcCCHHHHH-HHHhcchhHHHHcCCCccccCCCCCeeecccccccccccccccc--cccccc
Confidence            358888744       77899999998 66533       222333333444444          2333222  333333


Q ss_pred             CCCCCCCCcHHHHHHhCCcHHHHHHHHhCC---CCCCCCC----------------------------------------
Q 019158          210 CTQRVPPKNPKWAVYGRGLDDVSEFFNSGN---YDPPDKK----------------------------------------  246 (345)
Q Consensus       210 ~~~~~~g~tpL~aA~~~~~~evvklLl~~g---adin~~d----------------------------------------  246 (345)
                      ...+..|.|+++.|...++.+++.++...+   ..++..+                                        
T Consensus       101 n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (277)
T d2fo1e1         101 TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK  180 (277)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred             ccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccc
Confidence            456678999999999999988887775542   1122211                                        


Q ss_pred             ---CCCCCCcchHHH------H-HHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHH
Q 019158          247 ---SDGPRRKLFTKE------E-KVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHK  316 (345)
Q Consensus       247 ---~~~G~TpLh~Aa------i-~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~  316 (345)
                         ...|+|+||+++      + ..++...+.+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus       181 ~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~  260 (277)
T d2fo1e1         181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL  260 (277)
T ss_dssp             SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHH
T ss_pred             cccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHH
Confidence               246788888775      2 345778899999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHHC
Q 019158          317 AIIGKKQAVTNYLLRE  332 (345)
Q Consensus       317 Aa~~g~~eiv~~LL~~  332 (345)
                      |+..|+.+||++|+++
T Consensus       261 A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         261 AQANNHHNIVDIFDRC  276 (277)
T ss_dssp             HHHTTCHHHHHHHHTT
T ss_pred             HHHcCCHHHHHHHHHh
Confidence            9999999999999864

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-21  Score=176.74  Aligned_cols=129  Identities=20%  Similarity=0.161  Sum_probs=118.4

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHH----------HHHHHHHhcCCCCccCCCCCCcH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTK----------EEKVLLNKKLPHLATATSKKWLP  280 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~A----------ai~~lLl~~gadvn~~d~~G~Tp  280 (345)
                      ....|.|||+.|+..++.+++++|+++ |++++..+ ..|.++++.+          .++++|+++|++++.++..|.||
T Consensus       144 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~  222 (285)
T d1wdya_         144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP  222 (285)
T ss_dssp             TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred             hcccCchHHHHHHHcCCHHHHHHHHhccCCCccccc-CCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCc
Confidence            344689999999999999999999865 89999999 8898887744          36789999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 019158          281 LHSLAASGEFYFVDALLKH-NVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDE  341 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~  341 (345)
                      ||+|+..|+.+++++|+++ |++++.+|.+|.||||+|+..|+.+++++||++|||+|++|.
T Consensus       223 L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             cchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            9999999999999999975 899999999999999999999999999999999999999984

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.8e-22  Score=164.26  Aligned_cols=115  Identities=18%  Similarity=0.118  Sum_probs=105.7

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHH
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFY  291 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~e  291 (345)
                      ++|+.|+..|+.+++++|+++|++++.+| ..|+||||+|+      ++++|+++|++++.+|.+|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d-~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPN-DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccc-cccccccccccccccccccccccccccccccccccCcccccccchhhHHH
Confidence            56888999999999999999999999999 99999999997      679999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCcccCC-CCCCHHHHH--HHcCCHHHHHHHHHCC
Q 019158          292 FVDALLKHNVDINAVDK-DGLTALHKA--IIGKKQAVTNYLLRES  333 (345)
Q Consensus       292 iv~~LL~~Gadin~~d~-~G~TpLh~A--a~~g~~eiv~~LL~~G  333 (345)
                      ++++|+++|++++..+. .|.|+++++  +..|+.+++++|+..+
T Consensus        82 ~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence            99999999999998775 588987766  5778999999998753

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=4.9e-21  Score=158.65  Aligned_cols=142  Identities=17%  Similarity=0.111  Sum_probs=125.0

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      .+..|++.|+.+.++ .|+...+. +                          ..+..|+||||.|+..++.++++.++..
T Consensus         5 ~L~~Aa~~g~~~~v~-~LL~~ga~-~--------------------------~~~~~g~t~L~~a~~~~~~~~~~~~~~~   56 (153)
T d1awcb_           5 KLLEAARAGQDDEVR-ILMANGAP-F--------------------------TTDWLGTSPLHLAAQYGHFSTTEVLLRA   56 (153)
T ss_dssp             HHHHHHHHTCHHHHH-HHHHHTCC-C--------------------------CCCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             HHHHHHHCCCHHHHH-HHHHcCCC-c--------------------------ccccCCCccccccccccccccccccccc
Confidence            467799999999998 87765442 1                          1244589999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Q 019158          239 NYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLT  312 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~T  312 (345)
                      .......+ ..+.++++.++      +++++..+|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        57 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~T  135 (153)
T d1awcb_          57 GVSRDART-KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT  135 (153)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cccccccc-cccccccccccccccceeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCC
Confidence            88877777 78888888765      578999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHH
Q 019158          313 ALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       313 pLh~Aa~~g~~eiv~~L  329 (345)
                      |||+|+.+|+.+++++|
T Consensus       136 pl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         136 AFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHhC
Confidence            99999999999999987

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.86  E-value=5.8e-21  Score=165.64  Aligned_cols=131  Identities=18%  Similarity=0.075  Sum_probs=123.7

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----------------------------------
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----------------------------------  258 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----------------------------------  258 (345)
                      ..|.||||.|+..|+.+++++|++.|++++.++ ..+.++++.++                                   
T Consensus        21 ~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (209)
T d1ot8a_          21 KTGETSLHLAARFARADAAKRLLDAGADANSQD-NTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAAR   99 (209)
T ss_dssp             HHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhhcccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            469999999999999999999999999999999 89999988543                                   


Q ss_pred             -----HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 019158          259 -----EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRES  333 (345)
Q Consensus       259 -----i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G  333 (345)
                           ..+.|...+++++..+..|+|||++++..+...++..|+.++.+++..|..|.||||+|+..|+.+++++|+++|
T Consensus       100 ~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g  179 (209)
T d1ot8a_         100 LAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF  179 (209)
T ss_dssp             TTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             ccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCC
Confidence                 237889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC
Q 019158          334 ANPFVVDEVMWK  345 (345)
Q Consensus       334 ad~n~~d~~G~T  345 (345)
                      +|++.+|..|+|
T Consensus       180 ad~n~~d~~g~T  191 (209)
T d1ot8a_         180 ANREITDHMDRL  191 (209)
T ss_dssp             CCTTCCCTTSCC
T ss_pred             CCCCCcCCCCCC
Confidence            999999999987

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.7e-21  Score=160.45  Aligned_cols=125  Identities=18%  Similarity=0.122  Sum_probs=116.0

Q ss_pred             HHHHHHhCCcHHHHHHHHhC-CCCCCCCCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHH
Q 019158          219 PKWAVYGRGLDDVSEFFNSG-NYDPPDKKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       219 pL~aA~~~~~~evvklLl~~-gadin~~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~ei  292 (345)
                      .|+.|+..|+.++++.|++. +++++..| ..|+||||+|+     +++.|+.++++++..+..|.+||++++..++.++
T Consensus         5 ~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d-~~g~t~L~~A~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~   83 (156)
T d1bd8a_           5 RLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDT   83 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCCCccC-CCCCcccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46777777999999988864 88999999 99999999874     6789999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          293 VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       293 v~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++++++|++++.+|..|+||||+|+..|+.+++++|+ .|++++.+|.+|+|
T Consensus        84 ~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~T  135 (156)
T d1bd8a_          84 LKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLT  135 (156)
T ss_dssp             HHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCC
T ss_pred             cccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCC
Confidence            99999999999999999999999999999999999887 79999999999987

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=7.7e-21  Score=157.47  Aligned_cols=127  Identities=23%  Similarity=0.179  Sum_probs=119.1

Q ss_pred             CcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCH
Q 019158          217 KNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEF  290 (345)
Q Consensus       217 ~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~  290 (345)
                      .|||+.|+..|+.+++++|+++|++++ .+ ..|+||||+|+      ++..++.........+..+.++++.++...+.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~-~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cc-cCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence            389999999999999999999999987 57 89999999987      56788888888888888999999999999999


Q ss_pred             HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          291 YFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       291 eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +++++|+.+|++++.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+|
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~T  135 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT  135 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999987

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4e-21  Score=159.74  Aligned_cols=127  Identities=18%  Similarity=0.108  Sum_probs=121.7

Q ss_pred             cHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH-----HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHH
Q 019158          218 NPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE-----EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       218 tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa-----i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~ei  292 (345)
                      ++||.|+..|+.+++++|+++|++++.+| ..|.||||+|+     ++++|+++|++++.++..|.++|+.++..+...+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d-~~g~TpL~~A~~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQN-GFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCC-TTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccC-CcccccccccccccccccccccccccccccccccCccccccccccccccc
Confidence            78999999999999999999999999999 99999999864     7899999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCC
Q 019158          293 VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA-NPFVVDEVMWK  345 (345)
Q Consensus       293 v~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga-d~n~~d~~G~T  345 (345)
                      +.+|+.++.+++..|..|.+|||+|+..++.+++++|+++|+ +++.+|..|+|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~T  135 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT  135 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCC
Confidence            999999999999999999999999999999999999999875 89999999987

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=4.2e-21  Score=162.29  Aligned_cols=115  Identities=16%  Similarity=0.035  Sum_probs=104.6

Q ss_pred             HHHHHhCCcHHHHHHHHhCCCCCCCC------CCCCCCCcchHHH---------HHHHHHhcCCCCccCCCCCCcHHHHH
Q 019158          220 KWAVYGRGLDDVSEFFNSGNYDPPDK------KSDGPRRKLFTKE---------EKVLLNKKLPHLATATSKKWLPLHSL  284 (345)
Q Consensus       220 L~aA~~~~~~evvklLl~~gadin~~------d~~~G~TpLh~Aa---------i~~lLl~~gadvn~~d~~G~TpLh~A  284 (345)
                      |+.|+..+....+..++..|++++..      + ..|+||||+|+         ++++|+++|++++.+|..|+||||+|
T Consensus        10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGH-EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCS-STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCC-CCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence            56677778888888888889887765      5 68999999986         57899999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       285 a~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      |..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++.
T Consensus        89 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          89 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             cccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999999999999998654

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.2e-21  Score=157.74  Aligned_cols=95  Identities=23%  Similarity=0.210  Sum_probs=92.0

Q ss_pred             CCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHH
Q 019158          251 RRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQA  324 (345)
Q Consensus       251 ~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~e  324 (345)
                      .|||++|+      ++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            47999986      789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCC
Q 019158          325 VTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       325 iv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ++++|+++|+|++.+|.+|+|
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t  103 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLT  103 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCC
T ss_pred             hhhhhhcccccceeeCCCCCC
Confidence            999999999999999999987

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=4.4e-21  Score=177.89  Aligned_cols=132  Identities=17%  Similarity=0.141  Sum_probs=108.8

Q ss_pred             CCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH----------HHHHHhcCCCCccCCCCCCcHHH
Q 019158          213 RVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEE----------KVLLNKKLPHLATATSKKWLPLH  282 (345)
Q Consensus       213 ~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aai----------~~lLl~~gadvn~~d~~G~TpLh  282 (345)
                      +..|+||||.|+..|+.+++++|+++|++++.+| ..|+||||.|+.          ..++...+..++..|..|+||||
T Consensus       104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh  182 (301)
T d1sw6a_         104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH  182 (301)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCC-cccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHH
Confidence            3569999999999999999999999999999999 999999999873          12222234567788999999999


Q ss_pred             HHHHcCC----HH--------HHHHHHhCCC-------------------------------------CCcccCCCCCCH
Q 019158          283 SLAASGE----FY--------FVDALLKHNV-------------------------------------DINAVDKDGLTA  313 (345)
Q Consensus       283 ~Aa~~g~----~e--------iv~~LL~~Ga-------------------------------------din~~d~~G~Tp  313 (345)
                      +++..+.    ..        ++.+++..+.                                     .+|.+|.+|+||
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~Tp  262 (301)
T d1sw6a_         183 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC  262 (301)
T ss_dssp             HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred             HHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCH
Confidence            9886553    22        2333443332                                     168899999999


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          314 LHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       314 Lh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ||+|++.|+.++|++|+++|||++++|+.|+|
T Consensus       263 Lh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~T  294 (301)
T d1sw6a_         263 LNIAARLGNISIVDALLDYGADPFIANKSGLR  294 (301)
T ss_dssp             HHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            99999999999999999999999999999998

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.5e-20  Score=174.94  Aligned_cols=130  Identities=22%  Similarity=0.215  Sum_probs=61.7

Q ss_pred             CCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcC
Q 019158          215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASG  288 (345)
Q Consensus       215 ~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g  288 (345)
                      .+.||++.|+..+..+++++++..+...+..+ ..|.|||+.|+      ++++|+++|++++..+..+.||||+++..+
T Consensus       230 ~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~  308 (408)
T d1n11a_         230 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGN-KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG  308 (408)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSS
T ss_pred             CCCCHHHHHHHhCcHhHhhhhhcccccccccc-CCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccC
Confidence            34444444444444444444444444444444 44444444443      334444444444444444444444444444


Q ss_pred             CHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          289 EFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       289 ~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      +..++++++++|+++|.+|.+|.||||+|+..|+.++|++|+++|||++++|.+|+|
T Consensus       309 ~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t  365 (408)
T d1n11a_         309 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT  365 (408)
T ss_dssp             CSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCC
T ss_pred             cceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            444444444444444444444444444444444444444444444444444444443

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.83  E-value=3e-20  Score=161.04  Aligned_cols=183  Identities=14%  Similarity=0.073  Sum_probs=142.0

Q ss_pred             HHhcCchh-h-hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccc----------cccCccccc
Q 019158          136 QIEFGSRV-E-KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED----------RDCGFQDFV  203 (345)
Q Consensus       136 ~le~~~~~-e-~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~----------~~~~f~~~v  203 (345)
                      .++.|..+ . .+..|.+|+       +-|++.|+.+.++ .|+........ ........          ....+.. .
T Consensus         8 Ll~~g~din~~~d~~G~t~L-------~~A~~~g~~e~v~-~Ll~~g~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~~-~   77 (209)
T d1ot8a_           8 LLAQGAELNATMDKTGETSL-------HLAARFARADAAK-RLLDAGADANS-QDNTGRTPLHAAVAADAMGVFQILL-R   77 (209)
T ss_dssp             HHHHHHHHHHHHHHHCCCHH-------HHHHHTTCHHHHH-HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH-T
T ss_pred             HHHCCCCcCcCcCCCCCCHH-------HHHHHcCCHHHHH-HHHhhcccccc-ccccccccccccccccccccccccc-c
Confidence            35566666 3 357899998       5588999999997 77765443221 11111111          0000000 0


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCC
Q 019158          204 NSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKK  277 (345)
Q Consensus       204 ~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G  277 (345)
                      ............+.+..+.+.......+.+.|...+++++.++ ..|.|||++++      ++..++.++.+++..|..|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g  156 (209)
T d1ot8a_          78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD-NSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKD  156 (209)
T ss_dssp             CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred             ccccccccccccccccccccccccchhhhhhhhhhcccccccC-CCCCCcchhhcccCcceeeeeecccccccccccccc
Confidence            1111113355567888999999899999999999999999999 99999999986      5789999999999999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Q 019158          278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYL  329 (345)
Q Consensus       278 ~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~L  329 (345)
                      .||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|
T Consensus       157 ~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         157 ETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999999999999999999999999999999987

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=3.1e-20  Score=163.23  Aligned_cols=180  Identities=15%  Similarity=0.066  Sum_probs=138.5

Q ss_pred             hhhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCc---ccc----------cccCcccccCCCCCCC
Q 019158          144 EKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKES---EED----------RDCGFQDFVNSSSSTC  210 (345)
Q Consensus       144 e~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~---e~~----------~~~~f~~~v~~~~~~~  210 (345)
                      .+...|.+|+       +-|+..|+.+.++ .|+...... ......+   ..+          +.+.............
T Consensus        29 ~~d~~G~TpL-------~~A~~~g~~~iv~-~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (229)
T d1ixva_          29 QKDQDGRIPL-------HWSVSFQAHEITS-FLLSKMENV-NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN   99 (229)
T ss_dssp             CCCTTSCCHH-------HHHHHTTCHHHHH-HHHTTCTTC-CGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTT
T ss_pred             ccCCCCCCHH-------HHHHHcCCccccc-hhhhhhccc-ccccccccccccccccccccccccccccccccccccccc
Confidence            5667899998       4478899999887 666654332 1111111   111          0000000001111224


Q ss_pred             CCCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcC-CCCccCCCCCCcHHHH
Q 019158          211 TQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKL-PHLATATSKKWLPLHS  283 (345)
Q Consensus       211 ~~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~g-advn~~d~~G~TpLh~  283 (345)
                      .....+.++++.++..++.+++++|+..|.+.+..+ ..|+||||+|+      ++++|++.| .+++.+|.+|+||||+
T Consensus       100 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~  178 (229)
T d1ixva_         100 KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKD-KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH  178 (229)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred             ccccccccccccccccchhhhhhhhhhhcccccccC-CCCCCccchhhhcccccccccccccccccccccccccCCchhh
Confidence            456678899999999999999999999999999999 99999999987      578888887 6889999999999999


Q ss_pred             HHHcCCHHHHHHHHh-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          284 LAASGEFYFVDALLK-HNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       284 Aa~~g~~eiv~~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      |+..|+.+++++|++ +|++++.+|..|+||||+|+.   .+++++|+++|+|.
T Consensus       179 A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d~  229 (229)
T d1ixva_         179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVDA  229 (229)
T ss_dssp             HHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCCC
T ss_pred             hcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCCC
Confidence            999999999999996 599999999999999999984   58999999999973

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.9e-20  Score=174.70  Aligned_cols=129  Identities=22%  Similarity=0.162  Sum_probs=115.8

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..|.||++.|+..++.+++++|+++|++++..+ ..+.||||.++      ++++++..|++++.+|..|.||||+|+
T Consensus       260 ~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~-~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~  338 (408)
T d1n11a_         260 GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT-RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAA  338 (408)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-SSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             ccCCCCChhhhhhhcCcHHHHHHHHHCCCcccccc-ccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHH
Confidence            45578899999999999999999999999999999 89999999886      679999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH---HCCCCCCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLL---RESANPFVVDE  341 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL---~~Gad~n~~d~  341 (345)
                      ..|+.++|++|+++|+++|.+|.+|.||||+|+..|+.++|++|.   +++++..+.+.
T Consensus       339 ~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~  397 (408)
T d1n11a_         339 QQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK  397 (408)
T ss_dssp             HTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHHhcccccccccc
Confidence            999999999999999999999999999999999999999998664   45666666553

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.5e-20  Score=158.88  Aligned_cols=146  Identities=16%  Similarity=0.086  Sum_probs=123.6

Q ss_pred             cCCCCCCcCCHHHHHHHHhCCccccCchhhhc---CCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          148 QGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLD---KPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       148 ~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~---~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      .|.+||       +.|++.|+++.++ .|+..   ....+                         +..+..|+||||.|+
T Consensus         2 dG~TpL-------h~A~~~g~~~~v~-~Ll~~~~~~g~~i-------------------------n~~d~~g~TpL~~A~   48 (228)
T d1k1aa_           2 DGDTPL-------HIAVVQGNLPAVH-RLVNLFQQGGREL-------------------------DIYNNLRQTPLHLAV   48 (228)
T ss_dssp             TTCCHH-------HHHHHTTCHHHHH-HHHHHHHHTTCCS-------------------------CCCCTTSCCHHHHHH
T ss_pred             CCccHH-------HHHHHcCCHHHHH-HHHHHHHHCCCCC-------------------------CccCCCCCccceehh
Confidence            477887       4588999999988 77643   22111                         224557999999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH----------------------------------------------
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE----------------------------------------------  258 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa----------------------------------------------  258 (345)
                      ..|+.+++++|+++|++++... ..|.++++.|.                                              
T Consensus        49 ~~~~~~iv~~Ll~~ga~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  127 (228)
T d1k1aa_          49 ITTLPSVVRLLVTAGASPMALD-RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQ  127 (228)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             cccccccccccccccccccccc-cccccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhh
Confidence            9999999999999999999988 77777776431                                              


Q ss_pred             -------------------------------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC
Q 019158          259 -------------------------------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVD  307 (345)
Q Consensus       259 -------------------------------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d  307 (345)
                                                     +.+.++.+|.+++.+|..|.||||+|+..|+.+++++|+++|+|++.+|
T Consensus       128 ~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d  207 (228)
T d1k1aa_         128 LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN  207 (228)
T ss_dssp             HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred             hhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence                                           2367888999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHcCCHHHHH
Q 019158          308 KDGLTALHKAIIGKKQAVTN  327 (345)
Q Consensus       308 ~~G~TpLh~Aa~~g~~eiv~  327 (345)
                      .+|+||||+|+.+|+.++++
T Consensus       208 ~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         208 CHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCCHHHHHHhCCCccccC
Confidence            99999999999999998874

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6.7e-20  Score=149.84  Aligned_cols=94  Identities=22%  Similarity=0.273  Sum_probs=87.1

Q ss_pred             CcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHH
Q 019158          252 RKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAV  325 (345)
Q Consensus       252 TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~ei  325 (345)
                      +.||.|+      ++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            4567776      6899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCCCCCCCC-CCC
Q 019158          326 TNYLLRESANPFVVDEV-MWK  345 (345)
Q Consensus       326 v~~LL~~Gad~n~~d~~-G~T  345 (345)
                      +++|+++|++++..+.. |+|
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~  103 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQT  103 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCC
T ss_pred             HHHHHHcCCCcccccCCCCCC
Confidence            99999999999988754 554

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.77  E-value=1e-18  Score=158.86  Aligned_cols=131  Identities=19%  Similarity=0.189  Sum_probs=119.7

Q ss_pred             CCCCcHHHHHHhCCcHHHHHHHHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHc
Q 019158          214 VPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAAS  287 (345)
Q Consensus       214 ~~g~tpL~aA~~~~~~evvklLl~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~  287 (345)
                      ..+.|+|+.|+..|+.+++++|+++|+++|.+| ..|+||||+|+      ++++|+++|++.+..+..+.+||++|+..
T Consensus        38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d-~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~  116 (291)
T d1s70b_          38 FDDGAVFLAACSSGDTEEVLRLLERGADINYAN-VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC  116 (291)
T ss_dssp             ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCCchHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccc
Confidence            346789999999999999999999999999999 99999999986      78999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCccc------------------------------------------------------------C
Q 019158          288 GEFYFVDALLKHNVDINAV------------------------------------------------------------D  307 (345)
Q Consensus       288 g~~eiv~~LL~~Gadin~~------------------------------------------------------------d  307 (345)
                      ++.++++.|+++|+..+..                                                            +
T Consensus       117 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (291)
T d1s70b_         117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA  196 (291)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred             cccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccccccccc
Confidence            9999999999987654332                                                            3


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Q 019158          308 KDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       308 ~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      ..|.||||+|+..|+.+++++|+++|++++.++..|+|
T Consensus       197 ~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~T  234 (291)
T d1s70b_         197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT  234 (291)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred             CCCCChhhHHHHcCChhhhcccccceecccccccCCCC
Confidence            56789999999999999999999999999999999987

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.2e-19  Score=155.62  Aligned_cols=157  Identities=14%  Similarity=0.049  Sum_probs=128.6

Q ss_pred             hhhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHH
Q 019158          145 KKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVY  224 (345)
Q Consensus       145 ~~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~  224 (345)
                      +...|.+|+       +-|++.|+.+.++ .|+....+                          ....+..|.||++.++
T Consensus        35 ~d~~g~TpL-------h~A~~~~~~~iv~-~L~~~g~d--------------------------~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_          35 QNNLQQTPL-------HLAVITNQPEIAE-ALLGAGCD--------------------------PELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCTTCCCHH-------HHHHHTTCHHHHH-CCCSCCCC--------------------------SCCCCTTCCCHHHHHH
T ss_pred             CCCCCCccc-------ccccccccccccc-cccccccc--------------------------cccccccccccccccc
Confidence            456778887       4478888877776 44332221                          1234567899999999


Q ss_pred             hCCcHHHHHHHHhCCCCCCCCC-----CCCCCCcchHHH------HHHHHHhcCCCCccCC-CCCCcHHHHHHHcCCHHH
Q 019158          225 GRGLDDVSEFFNSGNYDPPDKK-----SDGPRRKLFTKE------EKVLLNKKLPHLATAT-SKKWLPLHSLAASGEFYF  292 (345)
Q Consensus       225 ~~~~~evvklLl~~gadin~~d-----~~~G~TpLh~Aa------i~~lLl~~gadvn~~d-~~G~TpLh~Aa~~g~~ei  292 (345)
                      ..++.++++.|++.+.......     ...|.||||.|+      ++.+|+..|+.++..+ ..|+||||+|+..|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            9999999999999876543321     256899999986      5688999999998875 579999999999999999


Q ss_pred             HHHHHhCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 019158          293 VDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN  335 (345)
Q Consensus       293 v~~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad  335 (345)
                      +++|+++|+|++.+|..|+||||+|+..++.+++++|++.+.+
T Consensus       161 v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999998755

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.5e-17  Score=147.45  Aligned_cols=160  Identities=16%  Similarity=0.121  Sum_probs=113.5

Q ss_pred             HHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHhCCcHHHHHHHHhC
Q 019158          159 KEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSG  238 (345)
Q Consensus       159 ~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~~~~~evvklLl~~  238 (345)
                      -++.|++.|+++.++ .|+....+ +.                        ...+..|.||||.|+..|+.+++++|++.
T Consensus         8 ~L~~Ai~~~~~e~vk-~Ll~~G~d-in------------------------~~~~~~g~tpL~~A~~~~~~eiv~~L~~~   61 (285)
T d1wdya_           8 LLIKAVQNEDVDLVQ-QLLEGGAN-VN------------------------FQEEEGGWTPLHNAVQMSREDIVELLLRH   61 (285)
T ss_dssp             HHHHHHHTTCHHHHH-HHHHTTCC-TT------------------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHH-HHHHCCCC-cC------------------------ccCCCCCCCHHHHHHHcCCHHHhhhhccc
Confidence            468899999999998 77665433 22                        12334689999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCcchHHH---------------------------------------HHHHHHhcCCCCccC------
Q 019158          239 NYDPPDKKSDGPRRKLFTKE---------------------------------------EKVLLNKKLPHLATA------  273 (345)
Q Consensus       239 gadin~~d~~~G~TpLh~Aa---------------------------------------i~~lLl~~gadvn~~------  273 (345)
                      +...+..+ ..+.++.++++                                       ....++....+++..      
T Consensus        62 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (285)
T d1wdya_          62 GADPVLRK-KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED  140 (285)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH
T ss_pred             cccccccc-cccchhhHHHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhh
Confidence            88777666 55555555432                                       012222222222221      


Q ss_pred             ----CCCCCcHHHHHHHcCCHH--------------------------------------HHHHHHhCCCCCcccCCCCC
Q 019158          274 ----TSKKWLPLHSLAASGEFY--------------------------------------FVDALLKHNVDINAVDKDGL  311 (345)
Q Consensus       274 ----d~~G~TpLh~Aa~~g~~e--------------------------------------iv~~LL~~Gadin~~d~~G~  311 (345)
                          +..|.||||+|+.+|+.+                                      ++++|+++|++++.+|..|.
T Consensus       141 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~  220 (285)
T d1wdya_         141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK  220 (285)
T ss_dssp             HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC
T ss_pred             hhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCC
Confidence                233556666666655444                                      45555556777777888999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCC
Q 019158          312 TALHKAIIGKKQAVTNYLLRE-SANPFVVDEVMWK  345 (345)
Q Consensus       312 TpLh~Aa~~g~~eiv~~LL~~-Gad~n~~d~~G~T  345 (345)
                      ||||+|+..|+.+++++|++. |++++.+|.+|.|
T Consensus       221 t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~T  255 (285)
T d1wdya_         221 TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT  255 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCC
T ss_pred             CccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCC
Confidence            999999999999999999985 9999999999987

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-18  Score=140.40  Aligned_cols=95  Identities=21%  Similarity=0.094  Sum_probs=89.0

Q ss_pred             CCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC-CHHHHHHHcCC
Q 019158          250 PRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGL-TALHKAIIGKK  322 (345)
Q Consensus       250 G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~-TpLh~Aa~~g~  322 (345)
                      +.++||+|+      ++++|+++|++++.++..|+||||+|+ .|+.+++++|+++|++++.++..|. ||||+|+..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            568999997      689999999999999999999999775 7999999999999999999998876 69999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCC
Q 019158          323 QAVTNYLLRESANPFVVDEVMWK  345 (345)
Q Consensus       323 ~eiv~~LL~~Gad~n~~d~~G~T  345 (345)
                      .+++++|+++|++++.+|..|+|
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T  104 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRL  104 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCC
T ss_pred             ccccccccccccccccccCCCCC
Confidence            99999999999999999999987

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.74  E-value=1e-20  Score=179.29  Aligned_cols=126  Identities=10%  Similarity=-0.012  Sum_probs=106.7

Q ss_pred             CCCCCCcHHHHHHhCCcHHHHHH---HHhCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCC--CCCCcH
Q 019158          212 QRVPPKNPKWAVYGRGLDDVSEF---FNSGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATAT--SKKWLP  280 (345)
Q Consensus       212 ~~~~g~tpL~aA~~~~~~evvkl---Ll~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d--~~G~Tp  280 (345)
                      ....|.|+|+.|+.+|+.+++++   |++.|++++.++ ..|+||||+|+      ++++|+++|++++..+  ..|+||
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~-~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~  164 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA  164 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--C-HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCCh
Confidence            34468999999999999877765   789999999999 99999999997      7899999999999876  469999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 019158          281 LHSLAASGEFYFVDALLKHNVDI---NAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFV  338 (345)
Q Consensus       281 Lh~Aa~~g~~eiv~~LL~~Gadi---n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~n~  338 (345)
                      ||+||.+|+.++|++|+++|++.   +..+.+|.||+|.|+.+|+.+++++|+++|++++.
T Consensus       165 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~  225 (346)
T d2ajaa1         165 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY  225 (346)
T ss_dssp             HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH
T ss_pred             hHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcch
Confidence            99999999999999999999765   34456778888999999999999999999987643

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=2.1e-17  Score=139.16  Aligned_cols=120  Identities=12%  Similarity=-0.031  Sum_probs=100.2

Q ss_pred             HHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHh---CCcHHHHHHHH
Q 019158          160 EYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYG---RGLDDVSEFFN  236 (345)
Q Consensus       160 ~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~---~~~~evvklLl  236 (345)
                      ++.|++.+++..+. +++....+...          ..          ........|+||||.|+.   .+..+++++|+
T Consensus        10 L~~Av~~~dl~~l~-~~~~~g~d~~~----------~~----------~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll   68 (154)
T d1dcqa1          10 LCEAVKTRDIFGLL-QAYADGVDLTE----------KI----------PLANGHEPDETALHLAVRSVDRTSLHIVDFLV   68 (154)
T ss_dssp             HHHHHHTTCHHHHH-HHHHTTCCTTS----------BC----------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH
T ss_pred             HHHHHHhCCHHHHH-HHHHcCCCcCC----------CC----------CcccCCCCCCchHHHHHHhcCCCCHHHHHHHH
Confidence            78899999998887 77765433221          00          002344568999999885   46889999999


Q ss_pred             hCCCCCCCCCCCCCCCcchHHH------HHHHHHhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 019158          237 SGNYDPPDKKSDGPRRKLFTKE------EKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNV  301 (345)
Q Consensus       237 ~~gadin~~d~~~G~TpLh~Aa------i~~lLl~~gadvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga  301 (345)
                      ++|++++.++ ..|+||||+|+      ++++|+++|++++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus        69 ~~gadin~~d-~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          69 QNSGNLDKQT-GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHCSCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             HcCCChhhhh-hhhccccccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            9999999999 99999999997      6899999999999999999999999999999999999998764

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=6.1e-17  Score=149.57  Aligned_cols=135  Identities=19%  Similarity=0.069  Sum_probs=102.3

Q ss_pred             hhcCCCCCCcCCHHHHHHHHhCCccccCchhhhcCCCCCCCCccCcccccccCcccccCCCCCCCCCCCCCCcHHHHHHh
Q 019158          146 KKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYG  225 (345)
Q Consensus       146 ~~~g~~pl~~~~~~~~~a~~~g~l~~lk~~ll~~~p~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~~~g~tpL~aA~~  225 (345)
                      +..|.+|||       .|+..|+++.++ .|+....+ +                         ...+..|+||||.|+.
T Consensus       104 D~~G~T~LH-------~Aa~~g~~~~v~-~Ll~~gad-~-------------------------~~~d~~G~TpL~~A~~  149 (301)
T d1sw6a_         104 DEHGNTPLH-------WLTSIANLELVK-HLVKHGSN-R-------------------------LYGDNMGESCLVKAVK  149 (301)
T ss_dssp             STTCCCHHH-------HHHHTTCHHHHH-HHHHTTCC-T-------------------------TBCCTTCCCHHHHHHH
T ss_pred             CCCCCCHHH-------HHHHcCCHHHHH-HHHHCCCC-C-------------------------CcCCcccccHHHHhhh
Confidence            467888874       488899999997 77654432 2                         2245569999999997


Q ss_pred             CCc-------HHHHHHHHhCCCCCCCCCCCCCCCcchHHHH------------------HHHHHhcCC------------
Q 019158          226 RGL-------DDVSEFFNSGNYDPPDKKSDGPRRKLFTKEE------------------KVLLNKKLP------------  268 (345)
Q Consensus       226 ~~~-------~evvklLl~~gadin~~d~~~G~TpLh~Aai------------------~~lLl~~ga------------  268 (345)
                      .++       .++++++..   .++..+ ..|+|+||+++.                  +.++...+.            
T Consensus       150 ~~~~~~~~~~~~ll~~l~~---~~~~~d-~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (301)
T d1sw6a_         150 SVNNYDSGTFEALLDYLYP---CLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES  225 (301)
T ss_dssp             SSHHHHTTCHHHHHHHHGG---GGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------
T ss_pred             cccchhhhhHHHHHHHHhh---hhhhcc-cccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccc
Confidence            654       244555443   456677 889999997641                  123333222            


Q ss_pred             -------------------------CCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 019158          269 -------------------------HLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAI  318 (345)
Q Consensus       269 -------------------------dvn~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadin~~d~~G~TpLh~Aa  318 (345)
                                               .+|.+|..|+||||+||+.|+.++|++|+++|++++.+|..|+|||++|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         226 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             hhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence                                     26889999999999999999999999999999999999999999999985

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.55  E-value=6e-17  Score=153.07  Aligned_cols=110  Identities=12%  Similarity=0.042  Sum_probs=88.2

Q ss_pred             CCcHHHHHHHHhCCCCCCC-----------CCCCCCCCcchHHHH------H---HHHHhcCCCCccCCCCCCcHHHHHH
Q 019158          226 RGLDDVSEFFNSGNYDPPD-----------KKSDGPRRKLFTKEE------K---VLLNKKLPHLATATSKKWLPLHSLA  285 (345)
Q Consensus       226 ~~~~evvklLl~~gadin~-----------~d~~~G~TpLh~Aai------~---~lLl~~gadvn~~d~~G~TpLh~Aa  285 (345)
                      .+..++.+++...+++++.           ++ ..|.|+||+|+.      +   ++|+..|++++.+|..|+||||+||
T Consensus        56 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa  134 (346)
T d2ajaa1          56 KNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKG-IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA  134 (346)
T ss_dssp             SHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHT-CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcchhhccchhhhhhHHHhcc-CCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHH
Confidence            3455666666655544433           34 578999999872      3   4478999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 019158          286 ASGEFYFVDALLKHNVDINAVD--KDGLTALHKAIIGKKQAVTNYLLRESANP  336 (345)
Q Consensus       286 ~~g~~eiv~~LL~~Gadin~~d--~~G~TpLh~Aa~~g~~eiv~~LL~~Gad~  336 (345)
                      .+|+.++|++|+++|++++..+  .+|+||||+|+..|+.++|++|++.|++.
T Consensus       135 ~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~  187 (346)
T d2ajaa1         135 ENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE  187 (346)
T ss_dssp             HTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGG
T ss_pred             HCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcc
Confidence            9999999999999999998876  46999999999999999999999999765