Citrus Sinensis ID: 019167

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIERVSGLPNHDC
cccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHccccccccccHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHHHccccccHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHccccccccHHHcEEEHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccc
ccccEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHcccccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccc
msfsffkpsrpktplevVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCmlsgdgevepnADQVLQLATEVCKEDVLILLVHklpilgweARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLrecikfpsLARYILESASFELFFKFvelptfdvasDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEflleppnshimKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVfvanpnkphEVKVILAKNHEKLLELLRNlsvgkgadddqFEEEKELIMKEIErvsglpnhdc
msfsffkpsrpktplevvkatkvslmaldikTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLseflleppnshiMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRnlsvgkgadddQFEEEKELIMKeiervsglpnhdc
MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFeeekelimkeieRVSGLPNHDC
***************EVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSV*******************************
*S************LEVVKATKVSLM*******************IEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEI***********
*************PLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIERVSGLPNHDC
*****FK*SRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIERVSG******
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MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVExxxxxxxxxxxxxxxxxxxxxLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIERVSGLPNHDC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
Q9Y376341 Calcium-binding protein 3 yes no 0.956 0.967 0.461 6e-71
Q29RI6341 Calcium-binding protein 3 yes no 0.956 0.967 0.461 6e-71
Q06138341 Calcium-binding protein 3 yes no 0.956 0.967 0.461 7e-71
Q9FGK3343 Putative MO25-like protei no no 0.936 0.941 0.429 8e-71
Q9H9S4337 Calcium-binding protein 3 no no 0.921 0.943 0.445 1e-70
Q9DB16337 Calcium-binding protein 3 no no 0.921 0.943 0.442 4e-70
Q9M0M4343 Putative MO25-like protei no no 0.936 0.941 0.416 3e-69
Q9P7Q8329 Mo25-like protein OS=Schi yes no 0.953 1.0 0.427 2e-65
O18211338 MO25-like protein 2 OS=Ca yes no 0.936 0.955 0.424 7e-64
P91891339 Protein Mo25 OS=Drosophil yes no 0.942 0.958 0.434 8e-63
>sp|Q9Y376|CAB39_HUMAN Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1 Back     alignment and function desciption
 Score =  268 bits (684), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 154/334 (46%), Positives = 217/334 (64%), Gaps = 4/334 (1%)

Query: 1   MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
           M F F K    K+P ++VK  K S+  L+ + + + KA EKA EE+ KN V M+ +L G 
Sbjct: 1   MPFPFGKSH--KSPADIVKNLKESMAVLEKQDISDKKA-EKATEEVSKNLVAMKEILYGT 57

Query: 61  GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120
            E EP  + V QLA E+    +L  LV  L ++ +E +KD+   ++ +L++++ +    V
Sbjct: 58  NEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTV 117

Query: 121 QFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPT 180
           ++I     +L  L+  Y++ E+AL+CGIMLRECI+   LA+ IL S  F  FF++VE+ T
Sbjct: 118 EYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMST 177

Query: 181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240
           FD+ASDAF+TFKDLLT+H  + +E+L  HYD FF  YEKLL S NYVT+RQSLKLL E L
Sbjct: 178 FDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELL 237

Query: 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAK 300
           L+  N  IM +YI +   LK+MM LL+D S+NIQ  AFH+FKVFVANPNK   +  IL K
Sbjct: 238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLK 297

Query: 301 NHEKLLELLRNLSVGKGADDDQFEEEKELIMKEI 334
           N  KL+E L      +  +D+QF +EK  ++K+I
Sbjct: 298 NQAKLIEFLSKFQNDR-TEDEQFNDEKTYLVKQI 330
Component of a complex that binds and activates STK11/LKB1. In the complex, required to stabilize the interaction between CAB39/MO25 (CAB39/MO25alpha or CAB39L/MO25beta) and STK11/LKB1.
Homo sapiens (taxid: 9606)
>sp|Q29RI6|CAB39_BOVIN Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1 Back     alignment and function description
>sp|Q06138|CAB39_MOUSE Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=2 Back     alignment and function description
>sp|Q9FGK3|MO25N_ARATH Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1 Back     alignment and function description
>sp|Q9H9S4|CB39L_HUMAN Calcium-binding protein 39-like OS=Homo sapiens GN=CAB39L PE=1 SV=3 Back     alignment and function description
>sp|Q9DB16|CB39L_MOUSE Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3 Back     alignment and function description
>sp|Q9M0M4|MO25M_ARATH Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1 Back     alignment and function description
>sp|Q9P7Q8|PMO25_SCHPO Mo25-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmo25 PE=3 SV=1 Back     alignment and function description
>sp|O18211|MO25M_CAEEL MO25-like protein 2 OS=Caenorhabditis elegans GN=mop-25.2 PE=3 SV=1 Back     alignment and function description
>sp|P91891|MO25_DROME Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
255551537 631 structural constituent of ribosome, puta 0.921 0.503 0.874 1e-161
224110494345 predicted protein [Populus trichocarpa] 0.997 0.997 0.863 1e-161
359477465345 PREDICTED: calcium-binding protein 39-li 0.991 0.991 0.833 1e-158
18419772345 Mo25-like protein [Arabidopsis thaliana] 0.991 0.991 0.818 1e-158
110735671345 hypothetical protein [Arabidopsis thalia 0.991 0.991 0.818 1e-157
449454434342 PREDICTED: calcium-binding protein 39-li 0.921 0.929 0.845 1e-155
145362644343 Mo25-like protein [Arabidopsis thaliana] 0.985 0.991 0.812 1e-155
224100291345 predicted protein [Populus trichocarpa] 0.997 0.997 0.851 1e-155
297807935345 Mo25 family protein [Arabidopsis lyrata 0.991 0.991 0.827 1e-154
225432482339 PREDICTED: calcium-binding protein 39-li 0.973 0.991 0.815 1e-153
>gi|255551537|ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis] gi|223543902|gb|EEF45428.1| structural constituent of ribosome, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 278/318 (87%), Positives = 297/318 (93%)

Query: 1   MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
           MSFSFFKPSRPKTPLEVVKA K SLMALD KTVVEVKALEKA+EE+EKN V MRC+L GD
Sbjct: 1   MSFSFFKPSRPKTPLEVVKAMKDSLMALDTKTVVEVKALEKALEEVEKNVVAMRCLLCGD 60

Query: 61  GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120
           GEVEPN DQV QL  EVCKEDVL L++HKLP LGWEARKDLVHCWS+LLKQKVDS YC V
Sbjct: 61  GEVEPNTDQVSQLVLEVCKEDVLALMIHKLPNLGWEARKDLVHCWSVLLKQKVDSKYCSV 120

Query: 121 QFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPT 180
           ++IENHFELLDFLVVCYDNKE+AL+CG+MLRECIKF SLA+YILESASFELFFKFVELP 
Sbjct: 121 EYIENHFELLDFLVVCYDNKEIALNCGLMLRECIKFSSLAKYILESASFELFFKFVELPN 180

Query: 181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240
           FDVASDAFSTFKDLL KH TVV+EYLTAHYDEFFDLYEKLLTS NYVTRRQSLKLLS+FL
Sbjct: 181 FDVASDAFSTFKDLLIKHDTVVAEYLTAHYDEFFDLYEKLLTSPNYVTRRQSLKLLSDFL 240

Query: 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAK 300
           LEPPNSHIMKRYILEVR+LKVMMTLLKDSSKNIQISAFHIFKVFVANPNKP EVKVILAK
Sbjct: 241 LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPREVKVILAK 300

Query: 301 NHEKLLELLRNLSVGKGA 318
           N+E+L+ELL +LSVGKGA
Sbjct: 301 NNERLVELLNDLSVGKGA 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224110494|ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|222864577|gb|EEF01708.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477465|ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like isoform 1 [Vitis vinifera] gi|297736958|emb|CBI26159.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18419772|ref|NP_568368.1| Mo25-like protein [Arabidopsis thaliana] gi|21593944|gb|AAM65898.1| unknown [Arabidopsis thaliana] gi|124301170|gb|ABN04837.1| At5g18940 [Arabidopsis thaliana] gi|332005248|gb|AED92631.1| Mo25-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110735671|dbj|BAE99816.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449454434|ref|XP_004144960.1| PREDICTED: calcium-binding protein 39-like [Cucumis sativus] gi|449471842|ref|XP_004153424.1| PREDICTED: calcium-binding protein 39-like [Cucumis sativus] gi|449523591|ref|XP_004168807.1| PREDICTED: calcium-binding protein 39-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|145362644|ref|NP_974807.2| Mo25-like protein [Arabidopsis thaliana] gi|332005247|gb|AED92630.1| Mo25-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224100291|ref|XP_002311818.1| predicted protein [Populus trichocarpa] gi|222851638|gb|EEE89185.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297807935|ref|XP_002871851.1| Mo25 family protein [Arabidopsis lyrata subsp. lyrata] gi|297317688|gb|EFH48110.1| Mo25 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225432482|ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2144990345 AT5G18940 [Arabidopsis thalian 0.991 0.991 0.792 6.6e-145
UNIPROTKB|E2R8W7341 CAB39 "Uncharacterized protein 0.924 0.935 0.464 3e-69
UNIPROTKB|Q29RI6341 CAB39 "Calcium-binding protein 0.924 0.935 0.464 3.8e-69
UNIPROTKB|Q9Y376341 CAB39 "Calcium-binding protein 0.924 0.935 0.464 3.8e-69
RGD|1306390341 Cab39 "calcium binding protein 0.924 0.935 0.464 3.8e-69
ZFIN|ZDB-GENE-040426-2897343 cab39l1 "calcium binding prote 0.927 0.932 0.442 3.8e-69
MGI|MGI:107438341 Cab39 "calcium binding protein 0.924 0.935 0.464 6.3e-69
ZFIN|ZDB-GENE-041114-204334 cab39l "calcium binding protei 0.889 0.919 0.471 6.3e-69
DICTYBASE|DDB_G0284307363 DDB_G0284307 "Mo25-like family 0.663 0.630 0.458 6e-68
ZFIN|ZDB-GENE-040625-158341 cab39 "calcium binding protein 0.924 0.935 0.448 5.1e-67
TAIR|locus:2144990 AT5G18940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
 Identities = 271/342 (79%), Positives = 303/342 (88%)

Query:     1 MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
             MSFSFFKPSRPKTP EVVKA + SLMALD KTVVEVKALEKA+EE+EKNF ++R +LSGD
Sbjct:     1 MSFSFFKPSRPKTPQEVVKAIRDSLMALDTKTVVEVKALEKALEEVEKNFSSLRGILSGD 60

Query:    61 GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120
             GE EPNADQ +QLA E CKEDV+ L++HKL ILGWE RKDL+HCWSILLKQKV  TYCCV
Sbjct:    61 GETEPNADQAVQLALEFCKEDVVSLVIHKLHILGWETRKDLLHCWSILLKQKVGDTYCCV 120

Query:   121 QFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPT 180
             Q+ E HFELLD LVVCYDNKE+ALHCG MLRECIKFPSLA+YILESA FELFFKFVELP 
Sbjct:   121 QYFEEHFELLDSLVVCYDNKEIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELPN 180

Query:   181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240
             FDVASDAFSTFKDLLTKH +VVSE+LT+HY EFFD+YE+LLTSSNYVTRRQSLKLLS+FL
Sbjct:   181 FDVASDAFSTFKDLLTKHDSVVSEFLTSHYTEFFDVYERLLTSSNYVTRRQSLKLLSDFL 240

Query:   241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAK 300
             LEPPNSHIMK++ILEVR+LKV+MTLLKDSSKNIQISAFHIFK+FVANPNKP EVK+ILA+
Sbjct:   241 LEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQEVKIILAR 300

Query:   301 NHEKLLELLRNLSVGKGADDDQFXXXXXXXXXXXXRVSGLPN 342
             NHEKLLELL +LS GKG++DDQF            ++SGL N
Sbjct:   301 NHEKLLELLHDLSPGKGSEDDQFEEEKELIIEEIQKLSGLKN 342
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|E2R8W7 CAB39 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RI6 CAB39 "Calcium-binding protein 39" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y376 CAB39 "Calcium-binding protein 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1306390 Cab39 "calcium binding protein 39" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2897 cab39l1 "calcium binding protein 39, like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:107438 Cab39 "calcium binding protein 39" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-204 cab39l "calcium binding protein 39-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284307 DDB_G0284307 "Mo25-like family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-158 cab39 "calcium binding protein 39" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q29RI6CAB39_BOVINNo assigned EC number0.46100.95650.9677yesno
Q9P7Q8PMO25_SCHPONo assigned EC number0.42720.95361.0yesno
O18211MO25M_CAEELNo assigned EC number0.42460.93620.9556yesno
P91891MO25_DROMENo assigned EC number0.43410.94200.9587yesno
Q06138CAB39_MOUSENo assigned EC number0.46100.95650.9677yesno
O60032HYMA_EMENINo assigned EC number0.34890.95070.8541yesno
Q9Y376CAB39_HUMANNo assigned EC number0.46100.95650.9677yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019875001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (345 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
pfam08569334 pfam08569, Mo25, Mo25-like 1e-144
>gnl|CDD|219909 pfam08569, Mo25, Mo25-like Back     alignment and domain information 
 Score =  410 bits (1057), Expect = e-144
 Identities = 164/336 (48%), Positives = 224/336 (66%), Gaps = 7/336 (2%)

Query: 1   MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
           M F F K   PKTP ++V++ K  L+ LD    +     EKA EE+ KN   ++ +L GD
Sbjct: 1   MPFLFKK--SPKTPSDLVRSLKDQLLKLD---SLSSDNAEKAQEEVSKNLSQLKEILVGD 55

Query: 61  GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTY-CC 119
            + EP  +Q+ QLA E+  ED+L LL+  L  L +E RKD+   +S +L++ +D+     
Sbjct: 56  TDAEPTQEQIAQLAQEMYSEDLLYLLIDNLHKLDFETRKDVALIFSNILRRSIDNNSRPT 115

Query: 120 VQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELP 179
           V ++  H E+L  L+  Y+  E+AL CG MLRECIK  +LA+ IL S  F  FFK+V+L 
Sbjct: 116 VDYLVAHPEILSLLLKGYETSEIALTCGDMLRECIKHEALAKIILYSPQFWKFFKYVQLS 175

Query: 180 TFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEF 239
           TF++A+DAFSTFKDLLT H  +V+E+L  +YD FF ++ KLL S+NYVT+RQSLKLL E 
Sbjct: 176 TFEIATDAFSTFKDLLTTHKKLVAEFLLNNYDRFFSMFNKLLQSTNYVTKRQSLKLLGEL 235

Query: 240 LLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILA 299
           LL+  NS +M +YI     LK+MM LL+D SKNIQ  AFH+FKVFVANPNK   ++ IL 
Sbjct: 236 LLDRANSKVMTKYISSPENLKLMMNLLRDKSKNIQFEAFHVFKVFVANPNKSKPIQDILV 295

Query: 300 KNHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIE 335
           KN +KLLE L + S  +  DD+QF +EKE I+K+IE
Sbjct: 296 KNRDKLLEFLEDFSTDRT-DDEQFLDEKEFIIKQIE 330

Mo25-like proteins are involved in both polarised growth and cytokinesis. In fission yeast Mo25 is localised alternately to the spindle pole body and to the site cell division in a cell cycle dependent manner. Length = 334

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
PF08569335 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro 100.0
KOG1566342 consensus Conserved protein Mo25 [Function unknown 100.0
KOG1566342 consensus Conserved protein Mo25 [Function unknown 92.1
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 89.5
PF10508 503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 88.37
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 87.56
PF08064107 UME: UME (NUC010) domain; InterPro: IPR012993 This 83.6
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 83.41
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 83.14
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 82.96
KOG0946 970 consensus ER-Golgi vesicle-tethering protein p115 80.21
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis Back     alignment and domain information 
Probab=100.00  E-value=3.7e-126  Score=928.24  Aligned_cols=333  Identities=53%  Similarity=0.836  Sum_probs=295.7

Q ss_pred             CCccCCCCCCCCChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhh
Q 019167            1 MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE   80 (345)
Q Consensus         1 m~~~f~~~k~~k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~   80 (345)
                      |||+|  +|+||||+|+||+++|+|.+|+ ++  .+++++|++|||+|+|++||+||+|++|++|++|+|+||++|+|++
T Consensus         1 M~FlF--~k~~KtP~ElVr~l~e~L~~L~-~~--~~~~~~k~~eeisK~L~~mK~IL~G~~e~ep~~e~v~qLa~Ei~~~   75 (335)
T PF08569_consen    1 MSFLF--KKKPKTPAELVRSLREALEKLD-SK--SDKKREKAQEEISKYLQQMKEILYGDGEPEPNPEQVAQLAQEIYRS   75 (335)
T ss_dssp             -------------HHHHHHHHHHHHHHHH-SS---HHHHHHHHHHHHHHHHHHHHHHHS-SS----HHHHHHHHHHHHHH
T ss_pred             CCCCc--CCCCCCHHHHHHHHHHHHHHhc-cc--cCcchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence            55555  4459999999999999999997 22  4678899999999999999999999999999999999999999999


Q ss_pred             cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCcc-chhHHhhhc-HhHHHHHHhcccCcchhhhhhHHHHHHhhhhH
Q 019167           81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTY-CCVQFIENH-FELLDFLVVCYDNKEVALHCGIMLRECIKFPS  158 (345)
Q Consensus        81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~-p~v~Yl~~~-peil~~Ll~gY~~~dial~~G~mLRecik~e~  158 (345)
                      |++..||.+|+.||||+|||+++||++++|+++|+++ |+|+|+++| |||+++|++||++||+|++||.|||||+|||+
T Consensus        76 dll~~Li~~L~~L~fEsrKdv~~if~~llr~~~~~~~~p~v~yl~~~~peil~~L~~gy~~~dial~~g~mlRec~k~e~  155 (335)
T PF08569_consen   76 DLLYLLIRNLPKLDFESRKDVAQIFSNLLRRQIGSRSPPTVDYLERHRPEILDILLRGYENPDIALNCGDMLRECIKHES  155 (335)
T ss_dssp             THHHHHHHTGGGS-HHHHHHHHHHHHHHHT--BTTB--HHHHHHHT--THHHHHHHHGGGSTTTHHHHHHHHHHHTTSHH
T ss_pred             CHHHHHHHHhhhCCCcccccHHHHHHHHHhhccCCCCCchHHHHHhCCHHHHHHHHHHhcCccccchHHHHHHHHHhhHH
Confidence            9999999999999999999999999999999999998 999999998 99999999999999999999999999999999


Q ss_pred             HHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHH
Q 019167          159 LARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSE  238 (345)
Q Consensus       159 la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLge  238 (345)
                      +|++||++++||+||+|++.|+||||||||+||+++||+||++||+||.+|||+||++|++||+|+||||||||||||||
T Consensus       156 l~~~iL~~~~f~~ff~~~~~~~Fdiasdaf~t~~~llt~hk~~~a~fl~~n~d~ff~~~~~Ll~s~NYvtkrqslkLL~e  235 (335)
T PF08569_consen  156 LAKIILYSECFWKFFKYVQLPNFDIASDAFSTFKELLTRHKKLVAEFLSNNYDRFFQKYNKLLESSNYVTKRQSLKLLGE  235 (335)
T ss_dssp             HHHHHHTSGGGGGHHHHTTSSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHCT-SSHHHHHHHHHHHHH
T ss_pred             HHHHHhCcHHHHHHHHHhcCCccHhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCCeEeehhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCC
Q 019167          239 FLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGA  318 (345)
Q Consensus       239 lLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~  318 (345)
                      ||+||+|++||+|||+||+|||+||+||+|+||+||+|||||||||||||+||+||++||.+||+|||+||.+|++|++ 
T Consensus       236 llldr~n~~vm~~yi~~~~nLkl~M~lL~d~sk~Iq~eAFhvFKvFVANp~K~~~I~~iL~~Nr~kLl~fl~~f~~~~~-  314 (335)
T PF08569_consen  236 LLLDRSNFNVMTRYISSPENLKLMMNLLRDKSKNIQFEAFHVFKVFVANPNKPPPIVDILIKNREKLLRFLKDFHTDRT-  314 (335)
T ss_dssp             HHHSGGGHHHHHHHTT-HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHH-SS-BHHHHHHHHHTHHHHHHHHHTTTTT---
T ss_pred             HHHchhHHHHHHHHHCCHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhCCCCCC-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCcccHHHHHHHHHHHhhcCC
Q 019167          319 DDDQFEEEKELIMKEIERVSG  339 (345)
Q Consensus       319 ~DeqF~dEK~~lI~~I~~L~~  339 (345)
                      +|+||.|||++||++|++|||
T Consensus       315 ~D~qf~~EK~~li~~i~~L~~  335 (335)
T PF08569_consen  315 DDEQFEDEKAYLIKQIESLPP  335 (335)
T ss_dssp             S-CHHHHHHHHHHHHHHT---
T ss_pred             ccccHHHHHHHHHHHHHhCCC
Confidence            999999999999999999986

In fission yeast Mo25 is localised alternately to the spindle pole body and to the site of cell division in a cell cycle dependent manner [, ]. ; PDB: 2WTK_A 1UPK_A 3GNI_A 1UPL_A.
>KOG1566 consensus Conserved protein Mo25 [Function unknown] Back     alignment and domain information
>KOG1566 consensus Conserved protein Mo25 [Function unknown] Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
3gni_A341 Structure Of Strad And Mo25 Length = 341 9e-70
3zhp_A340 Human Mst3 (stk24) In Complex With Mo25beta Length 2e-69
1upk_A341 Crystal Structure Of Mo25 In Complex With A C-Termi 2e-62
>pdb|3GNI|A Chain A, Structure Of Strad And Mo25 Length = 341 Back     alignment and structure 
Iteration: 1

 Score =  260 bits (664), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 209/323 (64%), Gaps = 4/323 (1%)
Query: 1   MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
           M F F K    K+P ++VK  K S+  L+ + + + KA EKA EE+ KN V M+ +L G 
Sbjct: 1   MPFPFGKSH--KSPADIVKNLKESMAVLEKQDISDKKA-EKATEEVSKNLVAMKEILYGT 57
Query: 61  GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120
            E EP  + V QLA E+    +L  LV  L ++ +E +KD+   ++ +L++++ +    V
Sbjct: 58  NEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTV 117
Query: 121 QFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPT 180
           ++I     +L  L+  Y++ E+AL+CGIMLRECI+   LA+ IL S  F  FF++VE+ T
Sbjct: 118 EYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMST 177
Query: 181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240
           FD+ASDAF+TFKDLLT+H  + +E+L  HYD FF  YEKLL S NYVT+RQSLKLL E L
Sbjct: 178 FDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELL 237
Query: 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAK 300
           L+  N  IM +YI +   LK+MM LL+D S+NIQ  AFH+FKVFVANPNK   +  IL K
Sbjct: 238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLK 297
Query: 301 NHEKLLELLRNLSVGKGADDDQF 323
           N  KL+E L      +  +D+QF
Sbjct: 298 NQAKLIEFLSKFQNDR-TEDEQF 319
>pdb|3ZHP|A Chain A, Human Mst3 (stk24) In Complex With Mo25beta Length = 340 Back     alignment and structure
>pdb|1UPK|A Chain A, Crystal Structure Of Mo25 In Complex With A C-Terminal Peptide Of Strad Length = 341 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 1e-131
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Length = 341 Back     alignment and structure
 Score =  377 bits (970), Expect = e-131
 Identities = 154/335 (45%), Positives = 217/335 (64%), Gaps = 4/335 (1%)

Query: 1   MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGD 60
           M F F K    K+P ++VK  K S+  L+ + + + KA EKA EE+ KN V M+ +L G 
Sbjct: 1   MPFPFGK--SHKSPADIVKNLKESMAVLEKQDISDKKA-EKATEEVSKNLVAMKEILYGT 57

Query: 61  GEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120
            E EP  + V QLA E+    +L  LV  L ++ +E +KD+   ++ +L++++ +    V
Sbjct: 58  NEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTV 117

Query: 121 QFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPT 180
           ++I     +L  L+  Y++ E+AL+CGIMLRECI+   LA+ IL S  F  FF++VE+ T
Sbjct: 118 EYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMST 177

Query: 181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240
           FD+ASDAF+TFKDLLT+H  + +E+L  HYD FF  YEKLL S NYVT+RQSLKLL E L
Sbjct: 178 FDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELL 237

Query: 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAK 300
           L+  N  IM +YI +   LK+MM LL+D S+NIQ  AFH+FKVFVANPNK   +  IL K
Sbjct: 238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLK 297

Query: 301 NHEKLLELLRNLSVGKGADDDQFEEEKELIMKEIE 335
           N  KL+E L      +  +D+QF +EK  ++K+I 
Sbjct: 298 NQAKLIEFLSKFQNDRT-EDEQFNDEKTYLVKQIR 331
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 100.0
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.5
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.17
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 96.91
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 96.71
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 96.47
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.02
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 95.62
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 95.38
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 94.8
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 94.8
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 94.43
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 94.35
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 94.01
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 93.84
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 93.66
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 93.06
2bpt_A 861 Importin beta-1 subunit; nuclear transport, nucleo 92.71
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 91.7
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 91.06
1ibr_B 462 P95, importin beta-1 subunit, nuclear factor; smal 90.51
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 90.48
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 90.36
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 89.5
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 89.42
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 88.88
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 88.84
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 88.04
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 86.69
2bpt_A 861 Importin beta-1 subunit; nuclear transport, nucleo 86.32
1qgr_A 876 Protein (importin beta subunit); transport recepto 84.25
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 83.43
2vgl_B 591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 83.33
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 82.03
3grl_A 651 General vesicular transport factor P115; vesicle t 80.39
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-132  Score=966.25  Aligned_cols=339  Identities=45%  Similarity=0.731  Sum_probs=312.2

Q ss_pred             CCccCCCCCCCCChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhh
Q 019167            1 MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE   80 (345)
Q Consensus         1 m~~~f~~~k~~k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~   80 (345)
                      |+|. |++ +||||+|+||+++|+|.+|+.++. ++++.+|++|||+|+|++||.+|+|++|++|+||+|+|||+|+|++
T Consensus         1 ~~m~-F~~-~~ktP~elVr~l~d~l~~l~~~~~-~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~   77 (341)
T 1upk_A            1 MPFP-FGK-SHKSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNS   77 (341)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHH
T ss_pred             CCCC-CCC-CCCCHHHHHHHHHHHHHHHhcccc-ccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence            7888 444 599999999999999999986442 2345578999999999999999999999999999999999999999


Q ss_pred             cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhHHHHHHhhhhHHH
Q 019167           81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLA  160 (345)
Q Consensus        81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~mLRecik~e~la  160 (345)
                      |+|++||.+||+||||+||||++||++++|+++|+++|+|+|+++||||+++|++||++||+|++||+|||||+|||++|
T Consensus        78 dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la  157 (341)
T 1upk_A           78 GLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLA  157 (341)
T ss_dssp             SHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHH
T ss_pred             CHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHh
Q 019167          161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL  240 (345)
Q Consensus       161 ~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelL  240 (345)
                      ++||++++||+||+|++.|+||||||||+||||+||+||++||+||++|||+||++||+||+|+||||||||||||||||
T Consensus       158 ~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLgelL  237 (341)
T 1upk_A          158 KIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELL  237 (341)
T ss_dssp             HHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred             HHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCC
Q 019167          241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADD  320 (345)
Q Consensus       241 ldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~D  320 (345)
                      +||+|++||++||+|++|||+||+||+|+|||||+|||||||||||||+||+||++||.+||+|||+||.+|++|++ +|
T Consensus       238 ldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~-eD  316 (341)
T 1upk_A          238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRT-ED  316 (341)
T ss_dssp             HSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHHHTTTTC--CC
T ss_pred             hCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHHHHHHhCCCCCc-ch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997 89


Q ss_pred             cccHHHHHHHHHHHhhcCCCCCC
Q 019167          321 DQFEEEKELIMKEIERVSGLPNH  343 (345)
Q Consensus       321 eqF~dEK~~lI~~I~~L~~~~~~  343 (345)
                      +||.|||++||++|++||+..+.
T Consensus       317 eqF~dEK~~lI~~I~~L~~~~~~  339 (341)
T 1upk_A          317 EQFNDEKTYLVKQIRDLKRPAQQ  339 (341)
T ss_dssp             SHHHHHHHHHHHHHHTCCCCCC-
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999877653
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 345
d1upka_330 a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) 1e-145
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 330 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Mo25 protein
domain: Mo25 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  411 bits (1058), Expect = e-145
 Identities = 150/324 (46%), Positives = 213/324 (65%), Gaps = 2/324 (0%)

Query: 12  KTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVL 71
           K+P ++VK  K S+  L+ + + + KA EKA EE+ KN V M+ +L G  E EP  + V 
Sbjct: 1   KSPADIVKNLKESMAVLEKQDISDKKA-EKATEEVSKNLVAMKEILYGTNEKEPQTEAVA 59

Query: 72  QLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLD 131
           QLA E+    +L  LV  L ++ +E +KD+   ++ +L++++ +    V++I     +L 
Sbjct: 60  QLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILF 119

Query: 132 FLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTF 191
            L+  Y++ E+AL+CGIMLRECI+   LA+ IL S  F  FF++VE+ TFD+ASDAF+TF
Sbjct: 120 MLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATF 179

Query: 192 KDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKR 251
           KDLLT+H  + +E+L  HYD FF  YEKLL S NYVT+RQSLKLL E LL+  N  IM +
Sbjct: 180 KDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTK 239

Query: 252 YILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRN 311
           YI +   LK+MM LL+D S+NIQ  AFH+FKVFVANPNK   +  IL KN  KL+E L  
Sbjct: 240 YISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSK 299

Query: 312 LSVGKGADDDQFEEEKELIMKEIE 335
               +  +D+QF +EK  ++K+I 
Sbjct: 300 FQNDRT-EDEQFNDEKTYLVKQIR 322

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.23
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 96.82
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 96.48
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 95.76
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.64
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 94.15
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 90.66
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 89.05
d2vglb_ 579 Adaptin beta subunit N-terminal fragment {Human (H 88.44
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 83.55
d1b3ua_588 Constant regulatory domain of protein phosphatase 81.79
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Mo25 protein
domain: Mo25 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-130  Score=946.03  Aligned_cols=328  Identities=45%  Similarity=0.737  Sum_probs=313.1

Q ss_pred             CChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhhCC
Q 019167           12 KTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLP   91 (345)
Q Consensus        12 k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~   91 (345)
                      |||+|+||+++|+|.+|+.++. .+++++|++|||+|+|++||.+|||++|+||+||+|+||++|+|++|+|++||.+||
T Consensus         1 ktP~elVr~~~d~l~~l~~~~~-~~~k~ek~~ee~~K~l~~mK~iL~G~~e~ep~~e~~~qL~~e~~~~d~l~~Li~~L~   79 (330)
T d1upka_           1 KSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQ   79 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHSHHHHHHHTGG
T ss_pred             CCHHHHHHHHHHHHHHHhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhChHHHHHHhCC
Confidence            7999999999999999997654 467889999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhHHHHHHhhhhHHHHHHhcchhHHH
Q 019167           92 ILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESASFEL  171 (345)
Q Consensus        92 ~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~mLRecik~e~la~~iL~~~~f~~  171 (345)
                      +||||+|||+++||++++|+++|+++|+|+||++||||+++|++||++||+|++||.|||||||||++|++||++++||+
T Consensus        80 ~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye~~eiAl~~G~mLREcik~e~lak~iL~s~~f~~  159 (330)
T d1upka_          80 LIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYD  159 (330)
T ss_dssp             GSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHHHHHHSGGGGH
T ss_pred             CCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcCCcchhhhhhHHHHHHHhhHHHHHHHHccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHH
Q 019167          172 FFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKR  251 (345)
Q Consensus       172 fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~  251 (345)
                      ||+|++.|+||||||||+||||+||+||++|||||++|||+||.+||+||+|+||||||||||||||||+||+|++||++
T Consensus       160 fF~yv~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrRqSlKLLgelLldr~N~~vm~~  239 (330)
T d1upka_         160 FFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTK  239 (330)
T ss_dssp             HHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHH
T ss_pred             HHHHHcCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCCcccHHHHHHHH
Q 019167          252 YILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIM  331 (345)
Q Consensus       252 Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~DeqF~dEK~~lI  331 (345)
                      ||+|++|||+||+||+|+||+||+|||||||||||||+||+||++||.+||+||++||.+|++|++ +||||.+||++||
T Consensus       240 Yvs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVANpnKp~~I~~IL~~Nr~kLl~fl~~f~~d~~-~DeqF~~EK~~lI  318 (330)
T d1upka_         240 YISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRT-EDEQFNDEKTYLV  318 (330)
T ss_dssp             HTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHHHTTTTC--CCSHHHHHHHHHH
T ss_pred             HhCCHHHHHHHHHHhcCchhhHHHHhhhHhhhhhcCCCCCHHHHHHHHHhHHHHHHHHHhCCCCCC-chhhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999997 8999999999999


Q ss_pred             HHHhhcCCCC
Q 019167          332 KEIERVSGLP  341 (345)
Q Consensus       332 ~~I~~L~~~~  341 (345)
                      ++|++||++.
T Consensus       319 ~~I~~L~~~~  328 (330)
T d1upka_         319 KQIRDLKRPA  328 (330)
T ss_dssp             HHHHTCCCCC
T ss_pred             HHHHhCCCCC
Confidence            9999998764
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure