Citrus Sinensis ID: 019191

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHEEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
metekkssvVSDVGAWAMNVISSVGIIMANKqlmsssgyafsfaTTLTGFHFAVTALVGLVSnatglsaskhvplwELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLqkkysigsfellsktapiQAVSLLVLGpfvdyylnGKFITTYKMTSGAILFIFLSCALAVFCNVsqylcigrfsatsfqVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEkqrnaktspqsknslTEEEIRLLKegventpvkdvelgetke
Flexible Loop (DISEMBL)
metekkssvvsdvgAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAekqrnaktspqsknsltEEEIRllkegventpvkdvelgetke
Low Complexity Region (SEG)
METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAvvvvvigvgvctitdvKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Disordered region (IsUnstruct)
*********VSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE********************************************
Disordered Region (DISOPRED)
************VGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS************************************************
Disordered Region (DISEMBL)
**********SDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAE***************TEEEIRLLKEGVENTPVKDVELGETKE
Disordered Region (DISPRO)
******SSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEK*****************************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
Q9SRE4	347	UDP-galactose transporter	no	no	0.991	0.985	0.836	1e-165
Q8RXL8	357	Uncharacterized membrane	no	no	0.889	0.859	0.362	3e-52
Q1JQ66	313	Solute carrier family 35	yes	no	0.849	0.936	0.279	3e-25
A4IFK2	313	Solute carrier family 35	yes	no	0.820	0.904	0.287	2e-21
Q7Z769	313	Solute carrier family 35	yes	no	0.817	0.900	0.277	8e-21
Q6PGC7	313	Solute carrier family 35	yes	no	0.828	0.913	0.273	1e-19
Q9C521	336	UDP-galactose transporter	no	no	0.689	0.708	0.252	2e-11
Q9SFE9	341	GDP-mannose transporter G	no	no	0.898	0.909	0.238	2e-11
Q9LDH3	361	Probable sugar phosphate/	no	no	0.811	0.775	0.269	1e-10
Q6DBP3	309	Probable sugar phosphate/	no	no	0.855	0.954	0.255	1e-09

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score =  579 bits (1493), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 287/343 (83%), Positives = 321/343 (93%), Gaps = 1/343 (0%)

Query: 2   ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
           E+EKKS+V SDVGAWAMNVISSVGIIMANKQLMSSSG+ F FATTLTGFHFA TALVG+V
Sbjct: 5   ESEKKSAV-SDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMV 63

Query: 62  SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
           SNATGLSASKHVPLWELLWFSIVAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWI
Sbjct: 64  SNATGLSASKHVPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWI 123

Query: 122 LHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
           LH+KHY KEVK +V+VVVIGVG+CT+TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct: 124 LHSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 183

Query: 182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
           S+GSFELLSKTAPIQA+SLL+ GPFVDY L+GKFI+TY+MT GAI  I LSCALAVFCN+
Sbjct: 184 SVGSFELLSKTAPIQAISLLICGPFVDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNI 243

Query: 242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
           SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+
Sbjct: 244 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVD 303

Query: 302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
            EKQRNAK++P  K+S+TE+EI+LLKEGVE+  +KDVELG+TK
Sbjct: 304 IEKQRNAKSTPHGKHSMTEDEIKLLKEGVEHIDLKDVELGDTK 346

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score =  206 bits (523), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 204/337 (60%), Gaps = 30/337 (8%)

Query: 3   TEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVS 62
           +E +   +  +GA +++V+SSV I++ NK L+S+ G  F+FATTLT +H  VT       
Sbjct: 2   SEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLG--FTFATTLTSWHLLVTF------ 53

Query: 63  NATGLSASKHVPLW------------ELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLS 110
                  S HV LW             ++ F I+  +SI  +N SL  NSVGFYQ++KL+
Sbjct: 54  ------CSLHVALWMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLA 107

Query: 111 MIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQ 170
           +IP   ++E +   K +S++++ ++ ++++GVG+ T+TD+++N  G + + +AV++T + 
Sbjct: 108 IIPCTVLLETLFFRKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVA 167

Query: 171 QITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIF 230
           QI   ++QKK+ + S +LL ++ P QA++L V GPF+D  L  + +  +K TS  + FI 
Sbjct: 168 QIMTNTIQKKFKVSSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIV 227

Query: 231 LSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAV 290
           LSC ++V  N S +L IG+ S  ++QVLGH+KT  VL  G++L      ++NI G+++AV
Sbjct: 228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAV 287

Query: 291 VGMVIYSWAVEAEKQRNAKTS----PQSKNSLTEEEI 323
           +GMV+YS+    E Q+ A  +    PQ K S  +  I
Sbjct: 288 IGMVVYSYYCSIETQQKASETSTQLPQMKESEKDPLI 324

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 11/304 (3%)

Query: 19  NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWEL 78
           N++SS+ I+  NK +    G+      TLT  HF +T L   +     + A K +   ++
Sbjct: 21  NLLSSICIVFINKWIYVHYGFP---NMTLTLIHFVMTWLGLFICQKMDIFAPKSLRPSKI 77

Query: 79  LWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVV 138
           L  ++     +   N SL  N++G YQ++K+   PV+  ++ + + K +S ++K+ +V +
Sbjct: 78  LLLALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLTLVPI 137

Query: 139 VIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAV 198
            +GV + +  DV+ N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ + 
Sbjct: 138 TLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query: 199 SLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVL 258
            LLVL PF +  L G        +  A+  + LS  +A   N+S Y  IG  S  ++ + 
Sbjct: 198 FLLVLVPFFE-PLTGDGGIFGPWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPVTYNMF 256

Query: 259 GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNSL 318
           GH K    L  G++LF   L+     G++  + G++ Y+    AE++       + K+ L
Sbjct: 257 GHFKFCITLLGGYVLFQDPLSLNQGLGILCTLTGILAYTHFKLAEQE-------EGKSRL 309

Query: 319 TEEE 322
           T+  
Sbjct: 310 TQRP 313

Putative transporter.

Danio rerio (taxid: 7955)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 150/289 (51%), Gaps = 6/289 (2%)

Query: 18  MNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWE 77
           +N++ S+ I+  NK +    G+      +LT  HF VT L   V     + A K +P  +
Sbjct: 20  LNLLVSICIVFLNKWIYVHYGFP---NMSLTLVHFVVTWLGLYVCQKLDIFAPKSLPPSK 76

Query: 78  LLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVV 137
           LL  ++     +   N SL  N++G YQ++K    PV+ V++ + + K +S ++++ ++ 
Sbjct: 77  LLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIP 136

Query: 138 VVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQA 197
           + +GV + +  DVK N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ +
Sbjct: 137 ITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSS 196

Query: 198 VSLLVLGPFVD-YYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQ 256
             LLV  PF +  +  G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ 
Sbjct: 197 AMLLVAVPFFEPVFAEGGIFGPWSVS--ALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYN 254

Query: 257 VLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ 305
           + GH K    L  G++LF   L+     GM+  + G++ Y+    +E++
Sbjct: 255 MFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFKLSEQE 303

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score =  101 bits (252), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 6/288 (2%)

Query: 19  NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWEL 78
           N++ S+ I+  NK +    G+      +LT  HF VT L   +     + A K +P   L
Sbjct: 21  NLLVSICIVFLNKWIYVYHGFP---NMSLTLVHFVVTWLGLYICQKLDIFAPKSLPPSRL 77

Query: 79  LWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVV 138
           L  ++     +   N SL  N++G YQ++K    PV+  ++   + K +S  +++ ++ +
Sbjct: 78  LLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPI 137

Query: 139 VIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAV 198
            +GV + +  DVK N  G + A + VL TSL Q+ +G+ Q +  + S +LL   AP+ + 
Sbjct: 138 TLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query: 199 SLLVLGPFVD-YYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQV 257
            LLV  PF +  +  G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ +
Sbjct: 198 MLLVAVPFFEPVFGEGGIFGPWSVS--ALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNM 255

Query: 258 LGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ 305
            GH K    L  G++LF   L+     G++  + G++ Y+    +E++
Sbjct: 256 FGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKLSEQE 303

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 150/293 (51%), Gaps = 7/293 (2%)

Query: 19  NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWEL 78
           N++ S+ I+  NK +    G+      +LT  HF VT L   +     + A K +PL +L
Sbjct: 21  NLLVSICIVFLNKWIYVHHGFP---NMSLTLVHFVVTWLGLYICQKLNIFAPKSLPLSKL 77

Query: 79  LWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVV 138
           L  ++     +   N SL  N++G YQ++K    PV+  ++   + K +S  +++ ++ +
Sbjct: 78  LLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFSVRIQLTLIPI 137

Query: 139 VIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAV 198
            +GV + +  DVK ++ G + A + V+ TSL Q+ +G+ Q +  + S +LL   AP+ + 
Sbjct: 138 TVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query: 199 SLLVLGPFVD-YYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQV 257
            LLV  PF +  +  G     + ++  A+L + LS  +A   N+S Y  IG  S  ++ +
Sbjct: 198 MLLVAVPFFEPVFAEGGIFGPWSVS--ALLMVLLSGIIAFMVNLSIYWIIGNTSPVTYNM 255

Query: 258 LGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKT 310
            GH K    L  G++LF   L+     G++  + G++ Y+   +  +Q  +K+
Sbjct: 256 FGHFKFCITLCGGYILFKDPLSVNQGLGILCTLFGILTYT-HFKLSEQEGSKS 307

Putative transporter.

Mus musculus (taxid: 10090)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 8/246 (3%)

Query: 82  SIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIG 141
           S V  ++I   N SL    V F Q  K        V++W++  K++   +  ++V +V G
Sbjct: 82  SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGG 141

Query: 142 VGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLL 201
           + + ++T++  N  GF  A    L+TS + I   SL   Y   S   +   AP      +
Sbjct: 142 ILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFAT---M 198

Query: 202 VLGPFVDYYLNGKFITTYKMTSGA---ILFIFLSCALAVFC-NVSQYLCIGRFSATSFQV 257
           +LG      L G  I ++     A    L I LS  +  FC N S +  I   +A +F V
Sbjct: 199 ILG-IPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNV 257

Query: 258 LGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNAKTSPQSKNS 317
            G++K    + + WL+F + +++ N  G  + +VG   Y +      Q+   T    +  
Sbjct: 258 AGNLKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQTPGTPRTPRTP 317

Query: 318 LTEEEI 323
            ++ E+
Sbjct: 318 RSKMEL 323

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 30/340 (8%)

Query: 8   SVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGL 67
           S++S +  W  NV     +I+ NK +       F F  +++  HF  +++   +     +
Sbjct: 15  SLLSILQWWGFNV----TVIIMNKWIFQK--LDFKFPLSVSCVHFICSSIGAYIV----I 64

Query: 68  SASKHVPL--------WELLW-FSIVANMSIAGMNFSLMLNSVGFYQISKLSMIP-VVCV 117
              K  PL        W  ++  S V  ++I   N SL    V F Q  K S+ P    V
Sbjct: 65  KVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIK-SLTPATTVV 123

Query: 118 MEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSL 177
           ++W++  K++   +  ++V +V G+ + +IT++  N  GF  A    L+TS + I   SL
Sbjct: 124 LQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESL 183

Query: 178 QKKYSIGSFELLSKTAPIQAVSLLVLG-PFVDYYLNG--KFITTYKMTSGAILFIFLSCA 234
              Y   S   +   AP      ++LG P      NG   +   +     A++ +F S  
Sbjct: 184 LHGYKFDSINTVYYMAPFAT---MILGLPAFLLERNGILDWFEAHPSPWSALIILFNSGV 240

Query: 235 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMV 294
           LA   N S +  I   +A +F V G++K    + + W++F + ++  N  G  + +VG  
Sbjct: 241 LAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCT 300

Query: 295 IYSWAVE--AEKQRNAKTSPQSKNSLTEEEIRLLKEGVEN 332
            Y +     +++Q     +P++  +   E I L+ + +E+
Sbjct: 301 FYGYVRHMLSQQQPGTPRTPRTPRN-KMELIPLVNDKLES 339

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 21/301 (6%)

Query: 22  SSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHV----PLWE 77
           S++G+++ NK L+   G+ +    T+T    +  A    V N  G+   +H+       +
Sbjct: 69  SNIGVLLLNKYLLFYYGFRYPIFLTMTHM-LSCAAYSSAVINIAGIVPRQHILSRRQFLK 127

Query: 78  LLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVV 137
           +L  S +  +S+   N SL    V F Q    +      V  +++  K  S EV +A++ 
Sbjct: 128 ILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVYLALLP 187

Query: 138 VVIGVGVCTITDVKVNAKGFLCACVA-----VLSTSLQQITIGSLQKKYSIGSFELLSKT 192
           VV G+ + + ++   +  GFL  CVA      L + +Q I + S  +K  + S  LL   
Sbjct: 188 VVSGIVLASNSEPSFHLFGFLI-CVASTAGRALKSVVQGIILTSESEK--LHSMNLLLYM 244

Query: 193 APIQAVSLLVLGPFVDYYLNG---KFITTYKMTSGAILFIFLSCA-LAVFCNVSQYLCIG 248
           AP+ A  LL   PF   Y+ G   + +     T   I+F+    A +A   N++ +L   
Sbjct: 245 APMAACILL---PF-TLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTK 300

Query: 249 RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA 308
             SA + QVLG+ K      +  L+F + +T   I+G  + ++G+V+YS A +  K  N 
Sbjct: 301 HTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKLLNQ 360

Query: 309 K 309
           K
Sbjct: 361 K 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 22/317 (6%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           M T  +   +  V +W     S++G+++ NK L+S+  Y F +   LT  H    +L+  
Sbjct: 3   MATNGRFFTIGLVASWYS---SNIGVLLLNKYLLSN--YGFKYPIFLTMCHMTACSLLSY 57

Query: 61  VSNA-----TGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVV 115
           V+ A        +    V  +++   S+V  +S+   N SL    V F Q    +     
Sbjct: 58  VAIAWLKMVPMQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFT 117

Query: 116 CVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAV-----LSTSLQ 170
            V  +++  K  +      +V VV GV + +  +   +  GFL  C+A      L + LQ
Sbjct: 118 AVFAYLMTRKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLM-CIAATAARALKSVLQ 176

Query: 171 QITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIF 230
            I + S  +K  + S  LL   API  V LL     ++  + G  I   +     + ++ 
Sbjct: 177 GILLSSEGEK--LNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLL 234

Query: 231 LSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAV 290
            + ALA   N++ +L     SA + QVLG+ K    + +  L+F + ++   + G  L V
Sbjct: 235 FNSALAYLVNLTNFLVTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMLGYSLTV 294

Query: 291 VGMVIYSWAVEAEKQRN 307
            G+++YS A    K+RN
Sbjct: 295 CGVILYSEA----KKRN 307

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
356538692	345	PREDICTED: UDP-galactose transporter 2-l	0.997	0.997	0.863	1e-170
363807936	345	uncharacterized protein LOC100780365 [Gl	0.997	0.997	0.863	1e-168
312281713	348	unnamed protein product [Thellungiella h	0.994	0.985	0.842	1e-168
224086158	345	predicted protein [Populus trichocarpa]	0.997	0.997	0.863	1e-167
225457727	344	PREDICTED: UDP-galactose transporter 2 i	0.997	1.0	0.881	1e-167
224061801	345	predicted protein [Populus trichocarpa]	1.0	1.0	0.852	1e-166
255539398	343	organic anion transporter, putative [Ric	0.991	0.997	0.863	1e-165
297842427	347	hypothetical protein ARALYDRAFT_476826 [	0.991	0.985	0.842	1e-164
449466508	345	PREDICTED: UDP-galactose transporter 2-l	0.997	0.997	0.877	1e-164
297850536	348	hypothetical protein ARALYDRAFT_889562 [	0.994	0.985	0.822	1e-164

>gi|356538692|ref|XP_003537835.1| PREDICTED: UDP-galactose transporter 2-like [Glycine max]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 297/344 (86%), Positives = 327/344 (95%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME+EKKSS +SDVGAWAMNV+SSVGIIMANKQLMS++GYAFSFA++LTGFHFAVTALVGL
Sbjct: 1   MESEKKSSAISDVGAWAMNVVSSVGIIMANKQLMSNNGYAFSFASSLTGFHFAVTALVGL 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATG SASKHVP+WEL+WFS+VANMSI GMNFSLMLNSVGFYQISKLSMIPVVCVMEW
Sbjct: 61  VSNATGYSASKHVPMWELIWFSLVANMSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILHNKHYS+EVKM+VVVVVIGVGVCT+TDVKVN KGF+CAC+AVLSTSLQQI+IGSLQKK
Sbjct: 121 ILHNKHYSREVKMSVVVVVIGVGVCTVTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLSKTAPIQA+ LL+LGPFVDYYL+GK IT YKM+SGAILFI LSC+LAVFCN
Sbjct: 181 YSIGSFELLSKTAPIQALFLLILGPFVDYYLSGKLITNYKMSSGAILFILLSCSLAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSA SFQVLGHMKTVCVLTLGWLLFDS LTFKNI GM++AVVGMVIYSWAV
Sbjct: 241 VSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVIAVVGMVIYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
           E EKQ NAKT P +KNS+TEEEIRLL++GVE +P+KDVELGE +
Sbjct: 301 ELEKQSNAKTLPHAKNSMTEEEIRLLRDGVEKSPLKDVELGEAQ 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807936|ref|NP_001242197.1| uncharacterized protein LOC100780365 [Glycine max] gi|255645046|gb|ACU23022.1| unknown [Glycine max]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 297/344 (86%), Positives = 325/344 (94%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME+EK+SS +SDVGAWAMNV+SSVGIIMANKQLMS++GYAFSFA++LTGFHFAVTALVGL
Sbjct: 1   MESEKRSSAISDVGAWAMNVVSSVGIIMANKQLMSNNGYAFSFASSLTGFHFAVTALVGL 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATG SASKHVP+WEL+WFS+VANMSI GMNFSLMLNSVGFYQISKLSMIPVVCVMEW
Sbjct: 61  VSNATGYSASKHVPMWELIWFSLVANMSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILHNKH S+EVKM+VVVVVIGVGVCT+TDVKVN KGF+CAC+AVLSTSLQQI+IGSLQKK
Sbjct: 121 ILHNKHCSREVKMSVVVVVIGVGVCTVTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLSKTAPIQA+ LL+LGPFVDYYL+GK IT+YKM+SGAIL I LSC+LAVFCN
Sbjct: 181 YSIGSFELLSKTAPIQALFLLILGPFVDYYLSGKLITSYKMSSGAILCILLSCSLAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSA SFQVLGHMKTVCVLTLGWLLFDS LTFKNI GMI+AVVGMVIYSWAV
Sbjct: 241 VSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMIIAVVGMVIYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
           E EKQ NAKT P  KNS+TEEEIRLLK GVEN+P+KDVELGE +
Sbjct: 301 ELEKQSNAKTLPHVKNSMTEEEIRLLKVGVENSPLKDVELGEAQ 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281713|dbj|BAJ33722.1| unnamed protein product [Thellungiella halophila]

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/343 (84%), Positives = 325/343 (94%)

Query: 2   ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
           E+EKK S VSDVGAWAMNVISSVGIIMANKQLMSSSG+ FSFATTLTGFHFA+TALVG+V
Sbjct: 5   ESEKKQSPVSDVGAWAMNVISSVGIIMANKQLMSSSGFGFSFATTLTGFHFALTALVGMV 64

Query: 62  SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
           SNATGLSASKH+PLWELLWFSIVAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWI
Sbjct: 65  SNATGLSASKHIPLWELLWFSIVANVSIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWI 124

Query: 122 LHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
           LH+KHYSKEVK +V+VVV+GVG+CT+TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct: 125 LHSKHYSKEVKASVMVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 184

Query: 182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
           S+GSFELLSKTAPIQA+SLL+ GPFVDY+L+G+FITTYKMT GAI  I LSCALAVFCN+
Sbjct: 185 SVGSFELLSKTAPIQAISLLIFGPFVDYFLSGRFITTYKMTYGAIFCILLSCALAVFCNI 244

Query: 242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
           SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS +TFKNI+GM+LAVVGMVIYSWAV+
Sbjct: 245 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMVLAVVGMVIYSWAVD 304

Query: 302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
            EKQRN+K++P  KNS+TE++I+LLKEG+E+  +KDVELGETK
Sbjct: 305 LEKQRNSKSTPHGKNSMTEDKIKLLKEGIEHMDLKDVELGETK 347

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086158|ref|XP_002307836.1| predicted protein [Populus trichocarpa] gi|222857285|gb|EEE94832.1| predicted protein [Populus trichocarpa]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/344 (86%), Positives = 325/344 (94%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME+E K S VSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL
Sbjct: 1   MESENKKSAVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATGLS SKHVP+WEL WFSIVAN+SI GMN SLMLNSVGFYQISKLSMIPVVC+MEW
Sbjct: 61  VSNATGLSVSKHVPMWELFWFSIVANVSITGMNLSLMLNSVGFYQISKLSMIPVVCIMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           I+H+K YSKEVK++V+VVVIGVGVCT+TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKK
Sbjct: 121 IIHSKQYSKEVKLSVLVVVIGVGVCTVTDVKVNAKGFICACLAVLSTSLQQITIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLS+TAPIQA+SLL+LGPF+DYYLNGKFIT YK++SGAILFI LSC+LAVFCN
Sbjct: 181 YSIGSFELLSRTAPIQALSLLILGPFIDYYLNGKFITHYKISSGAILFIILSCSLAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSATSFQVLGHMKT+CVLTLGWLLFDS LTFKNI GM++AVVGMV+YSWAV
Sbjct: 241 VSQYLCIGRFSATSFQVLGHMKTICVLTLGWLLFDSELTFKNIMGMVIAVVGMVVYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
           EAEK  NAKT P +KNSLTEEEIRLLKEGVE+ P+KD+EL  +K
Sbjct: 301 EAEKSSNAKTVPHTKNSLTEEEIRLLKEGVESMPLKDLELSVSK 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457727|ref|XP_002278064.1| PREDICTED: UDP-galactose transporter 2 isoform 1 [Vitis vinifera] gi|297745642|emb|CBI40807.3| unnamed protein product [Vitis vinifera]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/345 (88%), Positives = 328/345 (95%), Gaps = 1/345 (0%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME++KKSSV SDVGAWAMNVISSVGIIMANKQLMS+SGYAFSFATTLTGFHFAVTALVGL
Sbjct: 1   MESDKKSSV-SDVGAWAMNVISSVGIIMANKQLMSASGYAFSFATTLTGFHFAVTALVGL 59

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATG SASK+VPLWELLWFSIVANMSI GMN SLMLNSVGFYQISKLSMIPVVCVMEW
Sbjct: 60  VSNATGYSASKYVPLWELLWFSIVANMSITGMNLSLMLNSVGFYQISKLSMIPVVCVMEW 119

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILHNKHYS+EVK++VVVVVIGVGVCT+TDVKVNAKGF+CACVAV+STSLQQI+IGSLQKK
Sbjct: 120 ILHNKHYSREVKISVVVVVIGVGVCTVTDVKVNAKGFICACVAVVSTSLQQISIGSLQKK 179

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLSKTAPIQ++SLLVLGPF+DY+LNGKFIT YK++SG I FI LSC+LAVFCN
Sbjct: 180 YSIGSFELLSKTAPIQSISLLVLGPFIDYFLNGKFITNYKLSSGVIFFILLSCSLAVFCN 239

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSA SFQVLGHMKTVCVLTLGWLLFDS LTFKNISGMI+AVVGM+IYSWAV
Sbjct: 240 VSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNISGMIVAVVGMIIYSWAV 299

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE 345
           E EKQ NAKT    KNSLTEEEIRLLK+G+E TPVKD+ELGE+KE
Sbjct: 300 EIEKQANAKTMSNVKNSLTEEEIRLLKDGIEKTPVKDIELGESKE 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061801|ref|XP_002300605.1| predicted protein [Populus trichocarpa] gi|222842331|gb|EEE79878.1| predicted protein [Populus trichocarpa]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 294/345 (85%), Positives = 325/345 (94%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME+E K S VSDVGAWA+N+ISSVGIIMANKQLMS++GYAF FATTLTGFHF VTALVGL
Sbjct: 1   MESENKKSAVSDVGAWAINIISSVGIIMANKQLMSANGYAFGFATTLTGFHFTVTALVGL 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATGLS SKHVP+WELLWFS+VAN+SI GMN SLMLNSVGFYQISKLSMIPVVC+MEW
Sbjct: 61  VSNATGLSVSKHVPMWELLWFSVVANVSITGMNLSLMLNSVGFYQISKLSMIPVVCIMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILH+K YSKEVK++V+VVVIGVGVCT+TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKK
Sbjct: 121 ILHSKQYSKEVKLSVLVVVIGVGVCTVTDVKVNAKGFICACLAVLSTSLQQITIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLS+TAPIQAVSLL+LGPF+DYYLNGKFIT YK++SGAILFI LSC+LAVFCN
Sbjct: 181 YSIGSFELLSRTAPIQAVSLLILGPFIDYYLNGKFITNYKLSSGAILFIILSCSLAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSATSFQVLGHMKT+CVLTLGWLLFDS LTFKNI GM +AV+GMV+YSWAV
Sbjct: 241 VSQYLCIGRFSATSFQVLGHMKTICVLTLGWLLFDSELTFKNIMGMFIAVLGMVVYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE 345
           EAEK  NA+T+  SKNSLTEEEIRLLKEGVE+ P+KDVEL E+KE
Sbjct: 301 EAEKSLNARTTSYSKNSLTEEEIRLLKEGVESMPLKDVELAESKE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539398|ref|XP_002510764.1| organic anion transporter, putative [Ricinus communis] gi|223551465|gb|EEF52951.1| organic anion transporter, putative [Ricinus communis]

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/344 (86%), Positives = 325/344 (94%), Gaps = 2/344 (0%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           METE K S VSDVGAWAMNV+SSVGIIMANKQLMS++GYAFSFATTLTGFHFAVTALVG+
Sbjct: 1   METENKKSAVSDVGAWAMNVVSSVGIIMANKQLMSANGYAFSFATTLTGFHFAVTALVGV 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATG+S SKHVP+WEL WFSIVANMSI  MNFSLMLNSVGFYQISKLSMIPVVC+MEW
Sbjct: 61  VSNATGISVSKHVPMWELFWFSIVANMSITCMNFSLMLNSVGFYQISKLSMIPVVCIMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILH+KHYSKEVK++V+VVV GVGVCT+TDVKVNAKGF+CAC+AVLSTSLQQITIGSLQKK
Sbjct: 121 ILHSKHYSKEVKLSVLVVVTGVGVCTVTDVKVNAKGFICACLAVLSTSLQQITIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLSKTAPIQA+SLLVLGPFVDYYLNGKFI+TYKM++GAILFI LSC LAVFCN
Sbjct: 181 YSIGSFELLSKTAPIQAISLLVLGPFVDYYLNGKFISTYKMSTGAILFILLSCLLAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           +SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS LTFKNI GM++AV GMV+YSWAV
Sbjct: 241 MSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVIAVAGMVVYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
           EAEK  +AK    +KNSLTEEEIRLLKEG+E++PVKDVELGE+K
Sbjct: 301 EAEK--SAKALAHAKNSLTEEEIRLLKEGMESSPVKDVELGESK 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842427|ref|XP_002889095.1| hypothetical protein ARALYDRAFT_476826 [Arabidopsis lyrata subsp. lyrata] gi|297334936|gb|EFH65354.1| hypothetical protein ARALYDRAFT_476826 [Arabidopsis lyrata subsp. lyrata]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 289/343 (84%), Positives = 322/343 (93%), Gaps = 1/343 (0%)

Query: 2   ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
           E+EKKS+V SDVGAWAMNVISSVGIIMANKQLMSSSG+ F FATTLTGFHFAVTALVG+V
Sbjct: 5   ESEKKSAV-SDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAVTALVGMV 63

Query: 62  SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
           SNA+GLSASKHVPLWELLWFSIVAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWI
Sbjct: 64  SNASGLSASKHVPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWI 123

Query: 122 LHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
           LH+KHY KEVK +V+VVVIGVG+CT+TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct: 124 LHSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 183

Query: 182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
           S+GSFELLSKTAPIQA+SLL+ GPFVDY+L+GKFI+TYKMT GAI  I LSCALAVFCN+
Sbjct: 184 SVGSFELLSKTAPIQAISLLIFGPFVDYFLSGKFISTYKMTYGAIFCILLSCALAVFCNI 243

Query: 242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
           SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+
Sbjct: 244 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVD 303

Query: 302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
            EKQRNAK +P  KNS+TE+EI+LLKEGVE+  +KDVELG+TK
Sbjct: 304 LEKQRNAKLTPHGKNSMTEDEIKLLKEGVEHIDLKDVELGDTK 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466508|ref|XP_004150968.1| PREDICTED: UDP-galactose transporter 2-like [Cucumis sativus] gi|449529110|ref|XP_004171544.1| PREDICTED: UDP-galactose transporter 2-like [Cucumis sativus]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 302/344 (87%), Positives = 320/344 (93%)

Query: 1   METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
           ME EKKSS VSDVGAWAMN++SSVGIIMANKQLMS++GYAFSFATTLTGFHFAVTALVGL
Sbjct: 1   MEAEKKSSAVSDVGAWAMNIVSSVGIIMANKQLMSANGYAFSFATTLTGFHFAVTALVGL 60

Query: 61  VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
           VSNATG S+SKHVPLWEL WFSIVANMSI GMNFSLMLNSVGFYQISKLSMIPVVCVMEW
Sbjct: 61  VSNATGYSSSKHVPLWELFWFSIVANMSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120

Query: 121 ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
           ILHNKHY+KEVK+AVVVVVIGVGVCT+TDVKVN KGFLCAC+AVLSTSLQQITIGSLQKK
Sbjct: 121 ILHNKHYTKEVKIAVVVVVIGVGVCTVTDVKVNLKGFLCACIAVLSTSLQQITIGSLQKK 180

Query: 181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
           YSIGSFELLSKTAPIQA+SLLVLGPF+DYYL+   +  YKM+ GAILFI LSCALAVFCN
Sbjct: 181 YSIGSFELLSKTAPIQALSLLVLGPFIDYYLSDNSLLNYKMSYGAILFILLSCALAVFCN 240

Query: 241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
           VSQYLCIGRFSA SFQVLGHMKTVCVLTLGWLLFDS LT KNISGMILAVVGMVIYSWAV
Sbjct: 241 VSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTLKNISGMILAVVGMVIYSWAV 300

Query: 301 EAEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
           E EKQ + KT+   KNSLTEEEIRLLKEG E+ PVKD+ELGETK
Sbjct: 301 EVEKQSSMKTNINVKNSLTEEEIRLLKEGRESNPVKDIELGETK 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850536|ref|XP_002893149.1| hypothetical protein ARALYDRAFT_889562 [Arabidopsis lyrata subsp. lyrata] gi|297338991|gb|EFH69408.1| hypothetical protein ARALYDRAFT_889562 [Arabidopsis lyrata subsp. lyrata]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/343 (82%), Positives = 319/343 (93%)

Query: 2   ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
           E EKK S VSDVGAWAMNV SSVGIIMANKQLMSSSG+ F FATTLTGFHFA+TALVG+V
Sbjct: 5   ENEKKPSAVSDVGAWAMNVTSSVGIIMANKQLMSSSGFGFGFATTLTGFHFALTALVGMV 64

Query: 62  SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
           SNATGLSASKHVPLWELLWFS+VAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEW+
Sbjct: 65  SNATGLSASKHVPLWELLWFSLVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWV 124

Query: 122 LHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
           LH+KHYS+EVK +V+VVV+GVG+CT+TDVKVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct: 125 LHSKHYSREVKASVMVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 184

Query: 182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
           SIGSFELLSKTAPIQA+SLL+ GPFVDY+L+G+FI+TYKMT GA+L I LSCALAVFCN+
Sbjct: 185 SIGSFELLSKTAPIQAISLLIFGPFVDYFLSGRFISTYKMTYGAMLCILLSCALAVFCNI 244

Query: 242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
           SQYLCIGRFSATSFQVLGHMKTVCVLTLGWL+FDS +TFKNI+GM+LAVVGMVIYSWAVE
Sbjct: 245 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLIFDSEMTFKNIAGMVLAVVGMVIYSWAVE 304

Query: 302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
            EKQR +K +P  K+S+TE+EI+LLKEG+E+  +KD+ELG  K
Sbjct: 305 LEKQRKSKVTPHGKHSMTEDEIKLLKEGIEHMDLKDMELGNNK 347

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
TAIR|locus:2030076	347	AT1G76670 [Arabidopsis thalian	0.991	0.985	0.798	1.1e-144
TAIR|locus:2199557	348	AT1G21070 [Arabidopsis thalian	0.994	0.985	0.787	3.6e-144
TAIR|locus:2162271	350	AT5G42420 [Arabidopsis thalian	0.997	0.982	0.769	1.5e-138
TAIR|locus:2118514	335	AT4G09810 [Arabidopsis thalian	0.915	0.943	0.475	4.1e-72
TAIR|locus:2009076	335	AT1G34020 [Arabidopsis thalian	0.898	0.925	0.482	6.1e-71
TAIR|locus:2122467	337	NST-K1 "nucleotide sugar trans	0.915	0.937	0.455	2.6e-70
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.860	0.841	0.384	1.9e-51
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.901	0.871	0.361	4.6e-50
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.884	0.891	0.353	3.3e-47
TAIR|locus:2178373	398	AT5G55950 [Arabidopsis thalian	0.805	0.698	0.321	1.7e-27

TAIR|locus:2030076 AT1G76670 [Arabidopsis thaliana (taxid:3702)]

 Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
 Identities = 274/343 (79%), Positives = 305/343 (88%)

Query:     2 ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
             E+EKKS+V SDVGAWAMNVISSVGIIMANKQLMSSSG+ F FATTLTGFHFA TALVG+V
Sbjct:     5 ESEKKSAV-SDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMV 63

Query:    62 SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
             SNATGLSASKHVPLWELLWFSIVAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCV+EWI
Sbjct:    64 SNATGLSASKHVPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWI 123

Query:   122 LHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
             LH+KHY KEVK +                KVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct:   124 LHSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 183

Query:   182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
             S+GSFELLSKTAPIQA+SLL+ GPFVDY L+GKFI+TY+MT GAI  I LSCALAVFCN+
Sbjct:   184 SVGSFELLSKTAPIQAISLLICGPFVDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNI 243

Query:   242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
             SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS +TFKNI+GM +A+VGMVIYSWAV+
Sbjct:   244 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVD 303

Query:   302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
              EKQRNAK++P  K+S+TE+EI+LLKEGVE+  +KDVELG+TK
Sbjct:   304 IEKQRNAKSTPHGKHSMTEDEIKLLKEGVEHIDLKDVELGDTK 346

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2199557 AT1G21070 [Arabidopsis thaliana (taxid:3702)]

 Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
 Identities = 270/343 (78%), Positives = 302/343 (88%)

Query:     2 ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
             E EKK S VSDVGAWAMNV SSVGIIMANKQLMSSSG+ FSFATTLTGFHFA+TALVG+V
Sbjct:     5 ENEKKPSAVSDVGAWAMNVTSSVGIIMANKQLMSSSGFGFSFATTLTGFHFALTALVGMV 64

Query:    62 SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
             SNATGLSASKHVPLWELLWFS+VAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEW+
Sbjct:    65 SNATGLSASKHVPLWELLWFSLVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWV 124

Query:   122 LHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
             LH+KHYS+EVK +                KVNAKGF+CAC AV STSLQQI+IGSLQKKY
Sbjct:   125 LHSKHYSREVKASVMVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKY 184

Query:   182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
             SIGSFELLSKTAPIQA+SLL+ GPFVDY+L+G+FI+TYKMT  A+L I LSCALAVFCN+
Sbjct:   185 SIGSFELLSKTAPIQAISLLIFGPFVDYFLSGRFISTYKMTYSAMLCILLSCALAVFCNI 244

Query:   242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE 301
             SQYLCIGRFSATSFQVLGHMKTVCVLTLGWL+FDS +TFKNI+GM+LAVVGMVIYSWAVE
Sbjct:   245 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLIFDSEMTFKNIAGMVLAVVGMVIYSWAVE 304

Query:   302 AEKQRNAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETK 344
              EKQR +K  P  K+S+TE+EI+LLKEG+E+  +KD+ELG  K
Sbjct:   305 LEKQRKSKVIPHGKHSMTEDEIKLLKEGIEHMDLKDMELGNNK 347

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2162271 AT5G42420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1356 (482.4 bits), Expect = 1.5e-138, P = 1.5e-138
 Identities = 267/347 (76%), Positives = 296/347 (85%)

Query:     2 ETEKKS-SVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL 60
             E E+KS S VSD+GAWAMNVISSVGIIMANKQLMSSSG+AFSFATTLTGFHFA+TALVG+
Sbjct:     4 ENERKSPSAVSDMGAWAMNVISSVGIIMANKQLMSSSGFAFSFATTLTGFHFALTALVGM 63

Query:    61 VSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
             VSNATG SASKHVP+WEL+WFSIVAN+SIA MNFSLMLNSVGFYQISKLSMIPVVCVMEW
Sbjct:    64 VSNATGFSASKHVPMWELIWFSIVANVSIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEW 123

Query:   121 ILHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
             ILH+K YS+EVK++                KVNAKGF+CACVA+ S+SLQQI IGSLQKK
Sbjct:   124 ILHSKRYSREVKISVVVVVVGVGICTVTDVKVNAKGFICACVAIFSSSLQQILIGSLQKK 183

Query:   181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
             YSIGSFELLSKTAPIQA SLLV+GP VDY L+GKFI  Y M+SG  LFI LSC LAVFCN
Sbjct:   184 YSIGSFELLSKTAPIQAFSLLVVGPLVDYLLSGKFIMKYNMSSGCFLFILLSCGLAVFCN 243

Query:   241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
             +SQYLCIGRFSA SFQV+GHMKTVC+LTLGWLLFDSA+TFKN++GMI+A+VGMVIYSWA+
Sbjct:   244 ISQYLCIGRFSAVSFQVIGHMKTVCILTLGWLLFDSAMTFKNVAGMIVAIVGMVIYSWAM 303

Query:   301 EAEKQR--NAKTSPQSKNSLTEEEIRLLKEGVENTPVKDVELGETKE 345
             E EKQ    AK     K+SLTEEE  LLKEGVE T  KDVELG TK+
Sbjct:   304 ELEKQSIIAAKALNSVKHSLTEEEFELLKEGVETTQSKDVELGRTKD 350

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2118514 AT4G09810 [Arabidopsis thaliana (taxid:3702)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 155/326 (47%), Positives = 208/326 (63%)

Query:     2 ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
             +++KK+++  D  AW  NV++SVGII+ NK LM++  Y FSFATTLTG HFA T L+ LV
Sbjct:     6 KSDKKATL--DAAAWMFNVVTSVGIIIVNKALMAT--YGFSFATTLTGLHFATTTLMTLV 61

Query:    62 SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
                 G     H+P  ELL F + AN SI GMN SLM NSVGFYQI+KLSMIPV C++E +
Sbjct:    62 LRCLGYIQPSHLPFTELLKFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVV 121

Query:   122 LHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
                  YS++ K++                 VN KGF+ A VAV ST+LQQ  +  LQ+KY
Sbjct:   122 FDKIRYSRDTKLSIGLVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKY 181

Query:   182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
             S+ SF LL  TAP QA +LL++GPF+DY+L  K +  Y   S +++FI LSC +A+  N+
Sbjct:   182 SLSSFNLLGHTAPAQAATLLIVGPFLDYWLTDKRVDMYDYNSVSVMFITLSCTIAIGTNL 241

Query:   242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFD-SALTFKNISGMILAVVGMVIYSWAV 300
             SQ++CIGRF+A SFQVLGHMKT+ VL +G+  FD   L    I GMI+AV+GM+ Y  A 
Sbjct:   242 SQFICIGRFTAVSFQVLGHMKTILVLVMGFFFFDRDGLNLHVILGMIIAVLGMIWYGNAS 301

Query:   301 -----EAEKQRNAKTSPQSKNSLTEE 321
                  + +K  +  T+ Q K   T +
Sbjct:   302 SKPGGKEKKNYSLPTTRQQKLGATSD 327

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2009076 AT1G34020 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 153/317 (48%), Positives = 202/317 (63%)

Query:     2 ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
             + +KK++V  D  AW  NV++SVGII+ NK LM++ GY  SFATTLTG HFA T L+ LV
Sbjct:     6 KADKKAAV--DAAAWMFNVVTSVGIIIVNKALMATYGY--SFATTLTGLHFATTTLMTLV 61

Query:    62 SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
                 G     H+P  ELL F + AN SI GMN SLM NSVGFYQI+KLSMIPV C++E +
Sbjct:    62 LRCLGYIQPSHLPFTELLRFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEMV 121

Query:   122 LHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
                  YS++ K++                 VN KGF+ A VAV ST+LQQ  +  LQ+KY
Sbjct:   122 FDKIRYSRDTKLSIGLVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKY 181

Query:   182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
             S+ SF LL  TAP QA +LLV+GPF+DY+L  K +  Y     ++LFI LSC +A+  N+
Sbjct:   182 SLNSFNLLGHTAPAQAATLLVVGPFLDYWLTEKRVDMYDYNLVSVLFITLSCTIAIGTNL 241

Query:   242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFD-SALTFKNISGMILAVVGMVIYSWAV 300
             SQ++CIGRF+A SFQVLGHMKT+ VL +G+  F    L    + GMI+AV+GM+ Y  A 
Sbjct:   242 SQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVVGMIIAVLGMIWYGNAS 301

Query:   301 EAE--KQRNAKTSPQSK 315
                  K+R   + P ++
Sbjct:   302 SKPGGKERRNYSLPTTR 318

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2122467 NST-K1 "nucleotide sugar transporter-KT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 147/323 (45%), Positives = 209/323 (64%)

Query:     2 ETEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLV 61
             +T++K+++  D+ +W  NV++SVGII+ NK LM++  Y FSFATTLTG HF  T L+   
Sbjct:    11 KTDQKAAL--DIASWLFNVVTSVGIILVNKALMAT--YGFSFATTLTGLHFGTTTLLTTF 66

Query:    62 SNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI 121
                 G      +P  +LL F + AN SI GMN SLM NSVGFYQI+KLSMIPV C++E +
Sbjct:    67 LTWLGYIQPSQLPWPDLLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVM 126

Query:   122 LHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKY 181
             L N  YS++ K++                 VN  GFL A +AV ST+LQQ  +  LQ+KY
Sbjct:   127 LDNVRYSRDTKLSILLVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKY 186

Query:   182 SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNV 241
             S+GSF LL+ TAP+QA SLL++GPF+DY+L  + +  Y  +  ++ F+ LSC++AV  N+
Sbjct:   187 SLGSFNLLAHTAPVQAASLLLVGPFLDYWLTNQRVDAYNFSFVSLFFLILSCSIAVGTNL 246

Query:   242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDS-ALTFKNISGMILAVVGMVIYSWAV 300
             SQ++CIGRF+A SFQVLGHMKT+ VL LG+  F    L  + + GM++A++GM+ Y  A 
Sbjct:   247 SQFICIGRFTAVSFQVLGHMKTILVLVLGFTFFGKEGLNLQVVLGMLIAILGMIWYGNAS 306

Query:   301 EAE--KQRNAKTSPQSKNSLTEE 321
                  K+R + + P +K+    E
Sbjct:   307 SKPGGKERRSLSIPITKSQKLSE 329

GO:0005886 "plasma membrane" evidence=ISM

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 117/304 (38%), Positives = 186/304 (61%)

Query:    13 VGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKH 72
             +GA +++V+SSV I++ NK L+S+ G  F+FATTLT +H  VT     V  A  +   +H
Sbjct:    12 IGALSLSVVSSVSIVICNKALISTLG--FTFATTLTSWHLLVTFCSLHV--ALWMKFFEH 67

Query:    73 VPL--WELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKE 130
              P     +L F ++  +SI  +N SL  NSVGFYQ++KL++IP   V+E I   K +S++
Sbjct:    68 KPFDPRAVLGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFFRKMFSRK 127

Query:   131 VKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLS 190
             ++ +                ++N  G + + +AV++T + QI   ++QKKY + S +LL 
Sbjct:   128 IQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKVSSTQLLY 187

Query:   191 KTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRF 250
             ++ P QA++L V GPF+D  L  + +  +K TS  + FI LSC ++V  N S +L IG+ 
Sbjct:   188 QSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKT 247

Query:   251 SATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA-K 309
             S  ++QVLGH+KT  VL  G+LL   A +++NI G+++AV+GMV+YS+    E Q+ A +
Sbjct:   248 SPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLETQQKATE 307

Query:   310 TSPQ 313
             TS Q
Sbjct:   308 TSTQ 311

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 116/321 (36%), Positives = 191/321 (59%)

Query:     3 TEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVS 62
             +E +   +  +GA +++V+SSV I++ NK L+S+ G  F+FATTLT +H  VT     V 
Sbjct:     2 SEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLG--FTFATTLTSWHLLVTFCSLHV- 58

Query:    63 NATGLSASKHVPL--WELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEW 120
              A  +   +H P     ++ F I+  +SI  +N SL  NSVGFYQ++KL++IP   ++E 
Sbjct:    59 -ALWMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLET 117

Query:   121 ILHNKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKK 180
             +   K +S++++ +                ++N  G + + +AV++T + QI   ++QKK
Sbjct:   118 LFFRKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKK 177

Query:   181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN 240
             + + S +LL ++ P QA++L V GPF+D  L  + +  +K TS  + FI LSC ++V  N
Sbjct:   178 FKVSSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVN 237

Query:   241 VSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV 300
              S +L IG+ S  ++QVLGH+KT  VL  G++L      ++NI G+++AV+GMV+YS+  
Sbjct:   238 FSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYC 297

Query:   301 EAEKQRNA-KTS---PQSKNS 317
               E Q+ A +TS   PQ K S
Sbjct:   298 SIETQQKASETSTQLPQMKES 318

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 109/308 (35%), Positives = 180/308 (58%)

Query:     4 EKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSN 63
             E KS  +  +GA  ++V SSV I++ NK LM++ G  F FATTLT +H  VT     V+ 
Sbjct:     3 EMKSMQMGVIGALFLSVASSVSIVICNKALMTNLG--FPFATTLTSWHLMVTYCTLHVAY 60

Query:    64 ATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILH 123
                   +K + +  ++ F ++  +SI  +N SL  NS+GFYQ++KL++IP   ++E +  
Sbjct:    61 KLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query:   124 NKHYSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSI 183
             NK +S+++K +                ++N  G + + +A+ +T + QI   ++QK+ ++
Sbjct:   121 NKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNV 180

Query:   184 GSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQ 243
              S +LL ++AP QA  L V GPFVD YL    + ++  +   + FI LSC +AV  N S 
Sbjct:   181 TSTQLLYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFST 240

Query:   244 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE-A 302
             +L IG+ S  ++QVLGH+KT  VL  G+ L     T +NI+G+++AV+GM++YS+    A
Sbjct:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVA 300

Query:   303 EKQRNAKT 310
              K + A +
Sbjct:   301 SKSKQASS 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2178373 AT5G55950 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 94/292 (32%), Positives = 146/292 (50%)

Query:    13 VGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVT-ALVGLVSNATGLSAS- 70
             V A + N + +VGII+ANK +M   G  F+F   LT  H+ V   L+    + + L  S 
Sbjct:    58 VVAMSFNFVVAVGIILANKLVMGRVG--FNFPIFLTLIHYTVAWILLAFFKSLSLLPMSP 115

Query:    71 --KHVPLWELLWFSIVANMSIA-GM-NFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKH 126
               K  P   L  FS+ A M+ A G+ N SL  NSVGFYQ++K+++ P + + E++L  K 
Sbjct:   116 PSKTTPFSSL--FSLGAVMAFASGLANTSLKHNSVGFYQMAKIAVTPTIVLAEFVLFKKT 173

Query:   127 YSKEVKMAXXXXXXXXXXXXXXXXKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSF 186
              S    MA                + N  G L A   ++ +++ +I   +LQ++ +  + 
Sbjct:   174 ISSTKVMALAVVSLGVAIATVTDLEFNLFGALVAVAWIIPSAINKILWSNLQQQANWTAL 233

Query:   187 ELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLC 246
              L+ KT P     LL L P++D    G  +  + +T+ + + I  S  L      S  L 
Sbjct:   234 ALMWKTTPFTVFFLLALMPWLDP--PGVLLFKWDLTNSSAILI--SALLGFLLQWSGALA 289

Query:   247 IGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW 298
             +G  SATS  VLG  KT  +L  G+++F S   F +I G I A+ GM +Y+W
Sbjct:   290 LGATSATSHVVLGQFKTCVILLGGYVIFGSDPGFISICGAIAALGGMSVYTW 341

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SRE4	UGAL2_ARATH	No assigned EC number	0.8367	0.9913	0.9855	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	345
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	4e-30
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	1e-07
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	5e-07
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-04
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	0.001

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  111 bits (281), Expect = 4e-30
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 156 GFLCACVAVLSTSLQQITIGSLQKK---YSIGSFELLSKTAPIQAVSLLVLGPFVDY--- 209
           GF+ A  A    +L+ I    L KK     +   ELL   +P+  + LL    F +    
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 210 YLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTL 269
                       TS  +L + LS  LA   N+S +  +GR S  +  V G +K V V+ L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 270 GWLLFDSALTFKNISGMILAVVGMVIYSW 298
             ++F   +TF NI G+ +A++G+V+YS+
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 18/269 (6%)

Query: 46  TLTGFHFAVTALVGLVSNATGLSASKHVPLWEL-----LWFSIVANMSIAGMNFSLMLNS 100
           T++     V  L  L+  ATG      +   +L     L   +       G   S+ L +
Sbjct: 80  TISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGA 139

Query: 101 VGFYQISKLSMIPVVCVMEWILHNKHYSK-EVKMAVVVVVIGVGVCTITDVKVNAKGFLC 159
           V F  + K +  PV   +  IL  K +      ++++ +V GV + ++ ++      F C
Sbjct: 140 VSFTHVVK-AAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWC 198

Query: 160 ACVAVLSTSLQQITIGSLQK-KYSIGS-------FELLSKTAPIQAVSLLVL---GPFVD 208
           A ++ L +SL+ I      K K  IG        + LL+  A + ++ L++      +V 
Sbjct: 199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP 258

Query: 209 YYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLT 268
            + N     T       I  IF S       N   + C+G+ +  +  V   +K V ++ 
Sbjct: 259 VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIV 318

Query: 269 LGWLLFDSALTFKNISGMILAVVGMVIYS 297
              ++F + +T     GM +A++G ++YS
Sbjct: 319 SSIIIFQTQVTLLGYLGMAVAILGALLYS 347

Length = 350

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 61/282 (21%), Positives = 120/282 (42%), Gaps = 24/282 (8%)

Query: 30  NKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWF-----SIV 84
           NK+L++   Y +           AV +L  L+S ++GL   K + +   L       +IV
Sbjct: 21  NKKLLNVFPYPYFKTLI----SLAVGSLYCLLSWSSGLP--KRLKISSALLKLLLPVAIV 74

Query: 85  ANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCV-MEWILHNKHYSKEVKMAVVVVVIGVG 143
             +     N SL   +V F    K +M P   V +      + +   + ++++ +V GV 
Sbjct: 75  HTIGHVTSNVSLSKVAVSFTHTIK-AMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVA 133

Query: 144 VCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVL 203
           + + T++  N  GFL A ++ ++   + I     +K  +I S +  +  A I  +SL +L
Sbjct: 134 LASDTELSFNWAGFLSAMISNITFVSRNIFS---KKAMTIKSLDKTNLYAYISIMSLFLL 190

Query: 204 GPFVDYYLNGKFITTYKMTSGAIL--------FIFLSCALAVFCNVSQYLCIGRFSATSF 255
            P         F+    M + + +         +  +     F     ++ +GR S  + 
Sbjct: 191 SPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTH 250

Query: 256 QVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS 297
            V   MK V V+ +  L F + ++ + + G  +A+ G+ +YS
Sbjct: 251 SVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 17/270 (6%)

Query: 42  SFATTLTGFHFAVTALVGLVSN-ATGLSASKHVPLWELLWFSIVANMSIAGM--NFSLML 98
            F   LT   F   +LVGL+          + +PL    +  IVA   ++ +  N +L  
Sbjct: 30  PFGNLLTFAQFLFISLVGLLYLLLFKKLKPRKIPLKT--YVLIVATFFLSSVLNNEALKY 87

Query: 99  NSVGFYQISK-LSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAK-- 155
            S   + I K   +IPV+ ++  +++ K YS    ++ +++ +GV + T+   K +    
Sbjct: 88  ISYPTHVIFKSCKLIPVM-ILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSK 146

Query: 156 --------GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 207
                   G      A+L  +L   T   L KKY   S E++  +  +     L+    +
Sbjct: 147 LTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDI 206

Query: 208 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 267
              L     +        + ++ L+           +  I  F A +  ++  ++    L
Sbjct: 207 RTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTTLRKFVSL 266

Query: 268 TLGWLLFDSALTFKNISGMILAVVGMVIYS 297
            L  LLF + LT +   G +L  +G+ +Y+
Sbjct: 267 LLSVLLFGNPLTLQQWLGTLLVFLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 41/219 (18%), Positives = 88/219 (40%), Gaps = 9/219 (4%)

Query: 95  SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNA 154
           SL   +V  Y I K   I ++   E +      +    ++ +++V+   V T  D + +A
Sbjct: 88  SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA 147

Query: 155 K-------GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFV 207
                   G+L      LS++   + +    K  +   F+ +     +    LL      
Sbjct: 148 FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLF 207

Query: 208 DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVL 267
           + +  G       + S   +FI  S   +V  +     C+   S+T++ ++G +  + + 
Sbjct: 208 EDWSPGNLANNLSVDSLMAMFI--SGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIA 265

Query: 268 TLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQR 306
             G + FD+ + F +I  ++L  +   IY+ A   ++Q 
Sbjct: 266 LAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.93
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.85
COG2962	293	RarD Predicted permeases [General function predict	99.82
KOG1581	327	consensus UDP-galactose transporter related protei	99.81
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.81
KOG1580	337	consensus UDP-galactose transporter related protei	99.79
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.78
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.78
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.75
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.74
KOG2765	416	consensus Predicted membrane protein [Function unk	99.74
KOG1582	367	consensus UDP-galactose transporter related protei	99.73
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.7
KOG2766	336	consensus Predicted membrane protein [Function unk	99.67
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.24
COG2510	140	Predicted membrane protein [Function unknown]	99.2
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.18
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.11
COG2510	140	Predicted membrane protein [Function unknown]	99.05
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.01
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.99
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.93
PRK15430	296	putative chloramphenical resistance permease RarD;	98.79
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.76
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.68
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.59
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.5
PLN00411	358	nodulin MtN21 family protein; Provisional	98.49
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.37
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.35
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.25
COG2962	293	RarD Predicted permeases [General function predict	98.21
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.19
PRK11689	295	aromatic amino acid exporter; Provisional	98.17
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.14
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.09
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.06
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.06
PRK11272	292	putative DMT superfamily transporter inner membran	98.01
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.99
PRK13499	345	rhamnose-proton symporter; Provisional	97.94
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.78
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.77
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.77
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.74
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.71
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.63
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.62
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.6
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.5
PRK11431	105	multidrug efflux system protein; Provisional	97.47
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.43
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.34
COG2076	106	EmrE Membrane transporters of cations and cationic	97.34
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.19
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.11
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.07
PRK13499	345	rhamnose-proton symporter; Provisional	96.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.76
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.76
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.76
COG2076	106	EmrE Membrane transporters of cations and cationic	96.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.62
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.59
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.58
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.51
PRK11431	105	multidrug efflux system protein; Provisional	96.41
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.38
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.31
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.19
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.68
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.6
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.35
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.96
KOG1581	327	consensus UDP-galactose transporter related protei	94.78
KOG1580	337	consensus UDP-galactose transporter related protei	94.59
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.53
KOG2765	416	consensus Predicted membrane protein [Function unk	93.85
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.65
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.36
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.54
KOG2922	335	consensus Uncharacterized conserved protein [Funct	91.38
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	89.35
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	89.03
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	87.78
PRK02237	109	hypothetical protein; Provisional	83.6
KOG3912	372	consensus Predicted integral membrane protein [Gen	82.81

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.7e-36  Score=275.48  Aligned_cols=284  Identities=20%  Similarity=0.210  Sum_probs=229.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCC---CCCCchhHHHHHHHHHHH
Q 019191           11 SDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSA---SKHVPLWELLWFSIVANM   87 (345)
Q Consensus        11 ~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   87 (345)
                      ..++.|+   .+|+++++.||+++++    +++|..+++.|+.++.+.+.+.++.+.++   .++.+++++++.|++++.
T Consensus         5 ~~~~~w~---~~~~~~~~~NK~~l~~----~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         5 LLFGLWY---FLNVYFNIYNKKLLNV----FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHhh----CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            4455665   8999999999999998    89999999999999988776664322222   233456778899999988


Q ss_pred             HHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHHHHHHHHH
Q 019191           88 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLST  167 (345)
Q Consensus        88 ~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  167 (345)
                      ...+.|.+++|+++++++++++++|+++++++++++|||+++.++.+++++++|+++...++.+.+..|+++++++++++
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999877666677788999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCc-ccccc--ccCc-hhHHHHHHHHH-HHHHHHHH
Q 019191          168 SLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGK-FITTY--KMTS-GAILFIFLSCA-LAVFCNVS  242 (345)
Q Consensus       168 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~~~~~~-~~~~~~~~  242 (345)
                      |+|+++.||..++.+.++.+.+.|++..+.+.+++.....|...... .....  .+.. ..+...+..++ +....+..
T Consensus       158 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (302)
T TIGR00817       158 VSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV  237 (302)
T ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987655678999999999999988888776554321100 00000  0111 11222323333 34445566


Q ss_pred             HHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          243 QYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      .+..++++||++++++.+++|++++++|++++||++|+.+++|.++++.|+.+|++.|.
T Consensus       238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999999999999999999999986543

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-36  Score=269.78  Aligned_cols=297  Identities=33%  Similarity=0.456  Sum_probs=259.2

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCC----CchhHHHH
Q 019191            5 KKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKH----VPLWELLW   80 (345)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~   80 (345)
                      ..+........|..|++++++..+.||+++.+  ++|++|.+++..+++.+.+.....+..+..++++    .+++.+++
T Consensus        11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~--~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llp   88 (316)
T KOG1441|consen   11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK--YGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLP   88 (316)
T ss_pred             ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc--CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHH
Confidence            34566777777888889999999999999997  8899999999999999888888887766655444    56888999


Q ss_pred             HHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHH
Q 019191           81 FSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCA  160 (345)
Q Consensus        81 ~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~  160 (345)
                      +|+.++.+..+.|.|+.|+++|++|++++++|++++++++++.+|++++..+++++....|+++++..|.++|+.|++.+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh--hhcCCCHHHHHHhhhHHHHHHHH-HHHHHhhhccCCccccccccCchhHHHHHHHHHHHH
Q 019191          161 CVAVLSTSLQQITIGSLQ--KKYSIGSFELLSKTAPIQAVSLL-VLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAV  237 (345)
Q Consensus       161 l~a~~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~v~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (345)
                      +++.+..++++++.|+++  |+++.++.+++.|+++++.+.++ |.....|.... .......|+...+..+..+ ++++
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s-v~~f  246 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS-VLAF  246 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH-HHHH
Confidence            999999999999999988  46789999999999999999888 43333322111 0112234544444455555 9999


Q ss_pred             HHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHh
Q 019191          238 FCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  305 (345)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~  305 (345)
                      +.|...|.+++++||++.++.+.+|.++.++.|+++|+++.|+.+..|.++.+.|+.+|++.+.++++
T Consensus       247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999988776654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=4.2e-35  Score=270.31  Aligned_cols=285  Identities=19%  Similarity=0.258  Sum_probs=235.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCC-----CCchhHHHHHH
Q 019191            8 SVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASK-----HVPLWELLWFS   82 (345)
Q Consensus         8 ~~~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~   82 (345)
                      +....++.|+   .+|+..++.||+++++    +|+|++++.+|++++.+++.+++..+.++++     +.+++++++.|
T Consensus        49 ~~~~~~~~wy---~~s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         49 KLALLFLTWY---ALNVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             HHHHHHHHHH---HHHHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHH
Confidence            3455566666   7888889999999999    9999999999999998776655543322222     22456789999


Q ss_pred             HHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHHHH
Q 019191           83 IVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACV  162 (345)
Q Consensus        83 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~  162 (345)
                      +++.......+.|++++++++++++++++|+++++++++++|||++++++.+++++++|+.++..++.++++.|++++++
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~  201 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAML  201 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHH
Confidence            99888777788999999999999999999999999999999999999999999999999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHHHhhhc-----CCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccc----ccc-ccC-chhHHHHHH
Q 019191          163 AVLSTSLQQITIGSLQKKY-----SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFI----TTY-KMT-SGAILFIFL  231 (345)
Q Consensus       163 a~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~----~~~-~~~-~~~~~~~~~  231 (345)
                      |++++|+|+++.|+..+++     +.++.+...+..+.+.+.+++..+..|........    ... .+. ...+..++.
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            9999999999999988654     35677777777888888888887766532100000    000 111 123345666


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      ++++.++.|...+.++++++|.++++.++++|+++++.|++++||++|+.+++|.++++.|+++|++.
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            77888888988899999999999999999999999999999999999999999999999999999865

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=9.9e-31  Score=240.35  Aligned_cols=280  Identities=13%  Similarity=0.148  Sum_probs=206.4

Q ss_pred             HHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh--cCCCCCCCCchhH---HHHHHHHHHHHHhhhh
Q 019191           19 NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA--TGLSASKHVPLWE---LLWFSIVANMSIAGMN   93 (345)
Q Consensus        19 ~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   93 (345)
                      -..++.++..+.|..++.   |++ |..+.++|+.++++++..+.+  ++.++.++.++++   +...+++......+.+
T Consensus        21 ~q~~~~~~~~~~k~a~~~---G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~   96 (358)
T PLN00411         21 TETSVVGISTLFKVATSK---GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGY   96 (358)
T ss_pred             HHHHHHHHHHHHHHHHHC---CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            345778889999999976   899 999999999999877765432  2212223334444   4444554434555788


Q ss_pred             hhhcccchhHHHHHhhhhHHHHHHHHHHH------hccccChhhhhhhhhhhhcceeeeec-cc----------------
Q 019191           94 FSLMLNSVGFYQISKLSMIPVVCVMEWIL------HNKHYSKEVKMAVVVVVIGVGVCTIT-DV----------------  150 (345)
Q Consensus        94 ~al~~~~~s~~~~l~~~~p~~~~~l~~l~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~----------------  150 (345)
                      .+++|++++.++++.+++|++++++++++      +|||+++.++.|++++++|+.++... +.                
T Consensus        97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~  176 (358)
T PLN00411         97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL  176 (358)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence            89999999999999999999999999999      69999999999999999999875431 10                


Q ss_pred             -------ccc-chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccC
Q 019191          151 -------KVN-AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMT  222 (345)
Q Consensus       151 -------~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~  222 (345)
                             ..+ ..|+.+.++++++||+|++++|+..++++ +......+++..+.+...+.....+......+.  ..++
T Consensus       177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~  253 (358)
T PLN00411        177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI--IHFD  253 (358)
T ss_pred             ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccce--eccc
Confidence                   112 34999999999999999999999877542 333455566655555555544444321000111  1233


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          223 SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      ...+ .+++.++...+.+..+++++++.+|.+++++.+++|++++++|++++||++++.+++|+++++.|+.+.++.+++
T Consensus       254 ~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        254 ITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             hHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            3322 344444445556667778999999999999999999999999999999999999999999999999998876655


Q ss_pred             HHhh
Q 019191          303 EKQR  306 (345)
Q Consensus       303 ~~~~  306 (345)
                      |.++
T Consensus       333 ~~~~  336 (358)
T PLN00411        333 EEKD  336 (358)
T ss_pred             hhhh
Confidence            5443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=1.4e-27  Score=216.02  Aligned_cols=265  Identities=13%  Similarity=0.088  Sum_probs=193.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHH
Q 019191           10 VSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSI   89 (345)
Q Consensus        10 ~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (345)
                      ...+..|..++       ...|..+++    +| |..+.+.|+.++.+++..+.+  .++.++.+++.....++.+....
T Consensus        10 l~a~~~Wg~~~-------~~~k~~~~~----~~-P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~   75 (295)
T PRK11689         10 LIAILLWSTMV-------GLIRGVSES----LG-PVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYE   75 (295)
T ss_pred             HHHHHHHHHHH-------HHHHHHHcc----CC-hHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHH
Confidence            44455566433       669999998    99 999999999999887765532  12222333444444444455566


Q ss_pred             hhhhhhhc----ccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc-----------cccc
Q 019191           90 AGMNFSLM----LNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV-----------KVNA  154 (345)
Q Consensus        90 ~~~~~al~----~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----------~~~~  154 (345)
                      .+.+.+++    +.+++.++++.++.|+++.+++++++|||+++.++.+++++++|++++..++.           +.+.
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~  155 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP  155 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence            66666664    46788889999999999999999999999999999999999999988765432           1234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHH
Q 019191          155 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  234 (345)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (345)
                      .|++++++++++||.|+++.||..++  .++.....   ..+.+.+.+.... ++    ...  ..++...+..+.+.++
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~-~~----~~~--~~~~~~~~~~l~~~~~  223 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFL-SP----QPA--MVFSLPAIIKLLLAAA  223 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHH-hc----Ccc--ccCCHHHHHHHHHHHH
Confidence            69999999999999999999997653  45544322   1222222222222 11    111  1223333444445556


Q ss_pred             HHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          235 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      .+...+..+++++++.++..++.+.+++|+++++++++++||++++.+++|.++++.|+.+..+.+
T Consensus       224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            666677778899999999999999999999999999999999999999999999999998876543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=5.3e-28  Score=210.13  Aligned_cols=294  Identities=22%  Similarity=0.275  Sum_probs=249.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCc---hhHHHHHHHHH
Q 019191            9 VVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVP---LWELLWFSIVA   85 (345)
Q Consensus         9 ~~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~   85 (345)
                      .......-.++..+|+.|++.||++++.  ++||--+++...|.+.+.+.+....+.|..+.++.+   .|+|+|.++++
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~--y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSS--YNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH
Confidence            3333444445568999999999999999  555544444559999999999999888776666555   47899999999


Q ss_pred             HHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHHHHHHH
Q 019191           86 NMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVL  165 (345)
Q Consensus        86 ~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~  165 (345)
                      .+.......+++|++++.+++++..+|+++++.+.+++|.|+++..|.++....+|......+|.+++..|+.|++...+
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~  167 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCL  167 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCcccccc-cc-CchhHHHHHHHHHHHHHHHHHH
Q 019191          166 STSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTY-KM-TSGAILFIFLSCALAVFCNVSQ  243 (345)
Q Consensus       166 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~  243 (345)
                      +.+.+.+..|+..+..+.+.+.+++|..+.+...+.+...+.+++.  +..... .| ....+..+.++|++++..+++.
T Consensus       168 ~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s  245 (314)
T KOG1444|consen  168 TTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD--ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS  245 (314)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH--HHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988877888999999999988888887777766543  111111 12 2456778999999999999999


Q ss_pred             HHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHhh
Q 019191          244 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQR  306 (345)
Q Consensus       244 ~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~~  306 (345)
                      +++.+..|+++.++++......+.+...+++|+++++..++|..+.+.|..+|++.+.++++.
T Consensus       246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            999999999999999966666666677777788999999999999999999999987665443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.96  E-value=9.9e-27  Score=211.19  Aligned_cols=273  Identities=21%  Similarity=0.299  Sum_probs=228.3

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCchhHHHHHHHHHHHHHhhhhhhhcccchhHHHH
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGL-SASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQI  106 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~  106 (345)
                      +..+.+.+++ ++.++|.++++.|++...+.......... .++++.+++++.+.++++.++..+.|.|++|+|.++..+
T Consensus        17 ~~qE~i~~~~-~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~   95 (303)
T PF08449_consen   17 ILQEKIMTTP-YGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIV   95 (303)
T ss_pred             HHHHHHHcCC-CCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence            4455555552 33357999999999999887776654333 556777889999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecccc----c------cchhHHHHHHHHHHHHHHHHHHHH
Q 019191          107 SKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK----V------NAKGFLCACVAVLSTSLQQITIGS  176 (345)
Q Consensus       107 l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~~~v~~~~  176 (345)
                      ++++.|+++++++++++|||+++.|+.++++.++|+++....|.+    .      +..|+++.+++.++.|.+.+++|+
T Consensus        96 ~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~  175 (303)
T PF08449_consen   96 FKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEK  175 (303)
T ss_pred             HhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998776531    1      123999999999999999999999


Q ss_pred             HhhhcCCCHHHHHHhhhHHHHHHHHHHHHHh--hhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q 019191          177 LQKKYSIGSFELLSKTAPIQAVSLLVLGPFV--DYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATS  254 (345)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (345)
                      +.++++.++.+.++|++.++.+...+..+..  ++...  .......++..+..+...+++++......+..+++.||+.
T Consensus       176 ~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~--~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~  253 (303)
T PF08449_consen  176 LFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRS--AIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALT  253 (303)
T ss_pred             HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence            9999999999999999999998888777663  22111  1111112344566777788888888888888999999999


Q ss_pred             HhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHH
Q 019191          255 FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAE  303 (345)
Q Consensus       255 ~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~  303 (345)
                      .+++..++.++++++|++++++++++.+++|.+++..|..+|++.++|+
T Consensus       254 ~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  254 TTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999877653

; GO: 0055085 transmembrane transport

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=1.4e-26  Score=210.03  Aligned_cols=263  Identities=17%  Similarity=0.171  Sum_probs=189.9

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHH-HHHhhhhhhhcc-cchhHHH
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVAN-MSIAGMNFSLML-NSVGFYQ  105 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~-~~~s~~~  105 (345)
                      ...|..+++    ++ |..+.++|+.++++.+..+.++     ++.+++.+...+++.. ....+.+.+++| .+++.+.
T Consensus        21 ~~~k~~~~~----~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~   90 (299)
T PRK11453         21 VVIKVGLHN----MP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS   90 (299)
T ss_pred             HHHHHHHhc----CC-HHHHHHHHHHHHHHHHHHHhcC-----CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence            568999988    99 9999999999877655444321     1223445555566533 344456678887 6889999


Q ss_pred             HHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc---ccccchhHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 019191          106 ISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLSTSLQQITIGSLQKKYS  182 (345)
Q Consensus       106 ~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  182 (345)
                      ++.++.|+++.+++++++|||++++++++++++++|+.++..++   .+.+..|+.++++++++|+.|.++.|+..++.+
T Consensus        91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~  170 (299)
T PRK11453         91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHST  170 (299)
T ss_pred             HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999999999999999999999998876542   223457999999999999999999999765432


Q ss_pred             -CCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH-HHHHHHHHHHHHhhcccCchhHhHHhh
Q 019191          183 -IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC-ALAVFCNVSQYLCIGRFSATSFQVLGH  260 (345)
Q Consensus       183 -~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (345)
                       ........+.+..+.+.+.......+..... ......++...+..+++.+ +.+...+..+++.+++.++.+++.+.+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~  249 (299)
T PRK11453        171 RPAVMSLVVWSALIPIIPFFVASLILDGSATM-IHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSL  249 (299)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence             2223334444444443333332222221000 0000123333444444444 444455666678899999999999999


Q ss_pred             HHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          261 MKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       261 l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      ++|+++.++|++++||++++.+++|.++++.|+.+..+.++
T Consensus       250 l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        250 LVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999998766543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.1e-26  Score=209.33  Aligned_cols=275  Identities=18%  Similarity=0.199  Sum_probs=217.1

Q ss_pred             HHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHH--HhcCC---CCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 019191           22 SSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVS--NATGL---SASKHVPLWELLWFSIVANMSIAGMNFSL   96 (345)
Q Consensus        22 ~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al   96 (345)
                      |..+....++++-++   |++.|.+.++..++.-.++-...  .|++.   .+..+.+|++.+.++++-..++++.+.|+
T Consensus        24 ~~~~t~~~s~~l~~~---~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~  100 (334)
T PF06027_consen   24 CITGTGTFSSLLANK---GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAY  100 (334)
T ss_pred             HHHhHHHHHHHHHhc---CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            334445566666544   67789999888887655543322  22221   11234566667778999999999999999


Q ss_pred             cccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc---------cccchhHHHHHHHHHHH
Q 019191           97 MLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV---------KVNAKGFLCACVAVLST  167 (345)
Q Consensus        97 ~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~  167 (345)
                      +|++.+.++++.+++.+++++++++++|+|+++.|++|++++++|++++...|.         +....|++++++++++|
T Consensus       101 ~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~ly  180 (334)
T PF06027_consen  101 QYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILY  180 (334)
T ss_pred             hcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998776652         23568999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhh
Q 019191          168 SLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCI  247 (345)
Q Consensus       168 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
                      |.++++.|+..++  .+..+.+.+..+++.++..+...+.|..    .....+|+......++..+++-+..+...-..+
T Consensus       181 a~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~----~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l  254 (334)
T PF06027_consen  181 AVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERS----GIESIHWTSQVIGLLVGYALCLFLFYSLVPIVL  254 (334)
T ss_pred             HHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehh----hhhccCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998885  4678888888888888777776666542    344456665555555555555555555556679


Q ss_pred             cccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHh
Q 019191          248 GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  305 (345)
Q Consensus       248 ~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~  305 (345)
                      +..||+..++-.....+.+++++++++|+++++..++|.+++++|.++|+..++++++
T Consensus       255 ~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  255 RMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            9999999999999999999999999999999999999999999999999987655433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=5.3e-26  Score=205.52  Aligned_cols=260  Identities=9%  Similarity=0.019  Sum_probs=195.5

Q ss_pred             HHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCC-CCCCchhHHHHHHHHH-HHHHhhhhhhh-cccchhH
Q 019191           27 IMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSA-SKHVPLWELLWFSIVA-NMSIAGMNFSL-MLNSVGF  103 (345)
Q Consensus        27 ~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~~~~s~  103 (345)
                      ..+.|..+++    .+ |..+++.|+.++.+++..+...++.+ +++.++++....|.+. .....+.+++. ++++++.
T Consensus        24 ~~~~K~~~~~----~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~   98 (292)
T PRK11272         24 YLVIRIGVES----WP-PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGI   98 (292)
T ss_pred             HHHHHHHhcc----CC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence            3679999888    99 99999999999987766544322221 2233445555566554 44566778888 9999999


Q ss_pred             HHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeec-cccccchhHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 019191          104 YQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT-DVKVNAKGFLCACVAVLSTSLQQITIGSLQKKYS  182 (345)
Q Consensus       104 ~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  182 (345)
                      ++++.++.|+++.+++.+ +|||+++.++.|++++++|+.+...+ +.+.+..|++++++++++||.+.+..|+..++  
T Consensus        99 a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--  175 (292)
T PRK11272         99 AAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP--  175 (292)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--
Confidence            999999999999999986 69999999999999999999887543 33455689999999999999999999986432  


Q ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHH-HHHHHHHHHHHhhcccCchhHhHHhhH
Q 019191          183 IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA-LAVFCNVSQYLCIGRFSATSFQVLGHM  261 (345)
Q Consensus       183 ~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (345)
                       ++.....+....++..+.+.....+..    ...  ..+...+..+.+.++ .+...+...++++++.++.+.+++.++
T Consensus       176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l  248 (292)
T PRK11272        176 -VGMMAGAAEMLAAGVVLLIASLLSGER----LTA--LPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYV  248 (292)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHcCCc----ccc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence             234455666666666655554332211    000  112233334444443 445566667789999999999999999


Q ss_pred             HHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          262 KTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       262 ~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      +|+++++++++++||++|+.+++|.++++.|+.+.++.++
T Consensus       249 ~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        249 NPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999765433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=1e-25  Score=203.99  Aligned_cols=260  Identities=9%  Similarity=0.020  Sum_probs=183.5

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh-cCCCCC---CCCchhHH---HHHHHHHHHHHhhhhhhhcccc
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA-TGLSAS---KHVPLWEL---LWFSIVANMSIAGMNFSLMLNS  100 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~-~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~al~~~~  100 (345)
                      ...|.. .+    ++ |..+..+|++++.+++..... ++..+.   +..+++++   ...++..+.+..+.++|+++++
T Consensus        25 ~~~k~~-~~----~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   98 (296)
T PRK15430         25 AYFKLI-YY----VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHH   98 (296)
T ss_pred             HHHHHh-cC----CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            456875 56    89 999999999998875554332 111111   01123332   2334456668889999999999


Q ss_pred             hhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 019191          101 VGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGSLQKK  180 (345)
Q Consensus       101 ~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~  180 (345)
                      ++.++++.++.|+++.+++++++|||+++++|.+++++++|+.++..++.+.    ..++++++++||.|.+..|+..++
T Consensus        99 ~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~  174 (296)
T PRK15430         99 MLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVE  174 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999876433222    256888999999999999886432


Q ss_pred             cCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCc-hhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHh
Q 019191          181 YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTS-GAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLG  259 (345)
Q Consensus       181 ~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (345)
                      ...+......+..+.+.....   +..+..     ......++ ..+..+...++.+...+.+.++++++.++..++.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~  246 (296)
T PRK15430        175 AQTGMLIETMWLLPVAAIYLF---AIADSS-----TSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQ  246 (296)
T ss_pred             CchhHHHHHHHHHHHHHHHHH---HHccCC-----cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            222223333344433332221   111110     00011111 122344444555666777788899999999999999


Q ss_pred             hHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHh
Q 019191          260 HMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  305 (345)
Q Consensus       260 ~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~  305 (345)
                      +++|+++.++|++++||++++.+++|+++++.|+.+...+.....|
T Consensus       247 ~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~~  292 (296)
T PRK15430        247 YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQR  292 (296)
T ss_pred             HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999998887766554433

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=2.9e-26  Score=196.41  Aligned_cols=285  Identities=20%  Similarity=0.285  Sum_probs=240.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcC-C-CC--CCCCch----hHHH
Q 019191            8 SVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATG-L-SA--SKHVPL----WELL   79 (345)
Q Consensus         8 ~~~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~-~-~~--~~~~~~----~~~~   79 (345)
                      +++...+....++++|+++.+.+|+.-.+    |++|++.+.+|+++-.++....++.. . .+  +...+|    ++..
T Consensus        13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~----f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~a   88 (349)
T KOG1443|consen   13 NRVLTLALVLLYYFLSIGLTFYFKWLTKN----FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLA   88 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcC----cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhh
Confidence            34444444455669999999999999888    99999999999999888777665422 1 12  233445    4466


Q ss_pred             HHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHH
Q 019191           80 WFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLC  159 (345)
Q Consensus        80 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~  159 (345)
                      |.++..+..+++.|++++|++.+.+++.++++++|+.+++.++.-||+++.-..-+.++.+|+.+.++++.+++..|+.+
T Consensus        89 Ptalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~l  168 (349)
T KOG1443|consen   89 PTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFL  168 (349)
T ss_pred             hhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhc---CCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccc-cC----chhHHHHHH
Q 019191          160 ACVAVLSTSLQQITIGSLQKKY---SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYK-MT----SGAILFIFL  231 (345)
Q Consensus       160 ~l~a~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~  231 (345)
                      +..++++.+++..+.|+++++.   ..+|....++..+...+.+++.....|+.........+. .+    ......+.+
T Consensus       169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l  248 (349)
T KOG1443|consen  169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL  248 (349)
T ss_pred             HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence            9999999999999999998764   357888999999999999999988887643221111111 11    223346777


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  296 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~  296 (345)
                      ++..+++.-.+-+..+.+++..+.++++..+.+.+.+++..+.+++++..+++|..++..|+..+
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            77888888888889999999999999999999999999999999999999999999999999998

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=1.7e-25  Score=202.15  Aligned_cols=258  Identities=12%  Similarity=0.063  Sum_probs=189.6

Q ss_pred             HHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcccch
Q 019191           22 SSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSV  101 (345)
Q Consensus        22 ~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  101 (345)
                      +..+.....|+.+++    +| |..+.++|++++.+++..+.+.+..+.++.+++.....|++......+.+++++|+++
T Consensus        23 ~~~~~~~~~K~~~~~----~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~   97 (293)
T PRK10532         23 SIQSGASLAKSLFPL----VG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPL   97 (293)
T ss_pred             HHHhhHHHHHHHHHH----cC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence            333445679999998    99 9999999999998877665433222223344555667777777777888899999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc---ccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 019191          102 GFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLSTSLQQITIGSLQ  178 (345)
Q Consensus       102 s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~  178 (345)
                      +.+.++..+.|+++.+++    +||+++.  .++.++++|+.++...+   .+.+..|++++++++++||.|.+..|+..
T Consensus        98 ~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~  171 (293)
T PRK10532         98 GIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAG  171 (293)
T ss_pred             HHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999886    3565544  45667789988765322   23456799999999999999999999976


Q ss_pred             hhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHH-HHHHHHHHHHHHHHHHHHhhcccCchhHhH
Q 019191          179 KKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAIL-FIFLSCALAVFCNVSQYLCIGRFSATSFQV  257 (345)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (345)
                      ++  .++... .+....+++.+.+.....+     . .  ..++...+. .+..+.+++...+..+++.+++.++.++++
T Consensus       172 ~~--~~~~~~-~~~~~~~~~~l~~~~~~~~-----~-~--~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~  240 (293)
T PRK10532        172 AE--HGPATV-AIGSLIAALIFVPIGALQA-----G-E--ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT  240 (293)
T ss_pred             cc--CCchHH-HHHHHHHHHHHHHHHHHcc-----C-c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence            53  345444 3444555555444332211     1 0  112222222 234444455566667788999999999999


Q ss_pred             HhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          258 LGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       258 ~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      +.+++|+++.++|++++||++++.+++|.++++.|+..+.+..+
T Consensus       241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999876543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=2.1e-25  Score=198.53  Aligned_cols=251  Identities=14%  Similarity=0.063  Sum_probs=192.5

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHH-HHHHHHhhhhhhhcccchhHHHH
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSI-VANMSIAGMNFSLMLNSVGFYQI  106 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~s~~~~  106 (345)
                      +..|+.+++   ..| |......|++.+.+++....+.+   +++.+++.....+. ....+..+.++|++|++++.+++
T Consensus         6 ~~~k~~~~~---~~~-~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         6 VVIGQYLEG---QVP-LYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             HHHHHHHhc---CCC-HHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            568998875   356 88888899988877766554433   23334444555554 46678888999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc-ccccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCH
Q 019191          107 SKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-VKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGS  185 (345)
Q Consensus       107 l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~  185 (345)
                      +.++.|+++.+++.+++|||++++++.+++++++|+.++..++ .+.+..|+.++++++++|+.+.+..|+..++.+.++
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~  158 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL  158 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence            9999999999999999999999999999999999998865443 345568999999999999999999999876544445


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH-HHHHHHHHHHHHhhcccCchhHhHHhhHHHH
Q 019191          186 FELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC-ALAVFCNVSQYLCIGRFSATSFQVLGHMKTV  264 (345)
Q Consensus       186 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv  264 (345)
                      .....+....+.+.+.+.....++.     .   ..+...+..+...+ +.....+...++++++.++.+++.+.+++|+
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv  230 (260)
T TIGR00950       159 LQFTGWVLLLGALLLLPFAWFLGPN-----P---QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPL  230 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC-----C---CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence            5555555666666655544332211     1   11222333334344 4445566667789999999999999999999


Q ss_pred             HHHHhhHhhcCCcccccchhhHHHHhHHH
Q 019191          265 CVLTLGWLLFDSALTFKNISGMILAVVGM  293 (345)
Q Consensus       265 ~~~~~s~l~~~e~~s~~~iiG~~lii~G~  293 (345)
                      ++++++++++||++++.+++|.++++.|+
T Consensus       231 ~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       231 VALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999986

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=6.1e-26  Score=191.30  Aligned_cols=285  Identities=17%  Similarity=0.174  Sum_probs=242.0

Q ss_pred             HHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhc-----CCCCCCC--Cc---hhHHHHHHHHHHHHHh
Q 019191           21 ISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNAT-----GLSASKH--VP---LWELLWFSIVANMSIA   90 (345)
Q Consensus        21 ~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~-----~~~~~~~--~~---~~~~~~~~~~~~~~~~   90 (345)
                      .+|+++++.||++++......+.|.+.++.|.+.+..+...+.+.     +....++  .+   .++++|+++.+...+.
T Consensus        38 v~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~  117 (347)
T KOG1442|consen   38 VTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMIS  117 (347)
T ss_pred             eeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehh
Confidence            488999999999999866667789999999999998877766431     1111122  22   3679999999999999


Q ss_pred             hhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc---ccccchhHHHHHHHHHHH
Q 019191           91 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLST  167 (345)
Q Consensus        91 ~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~  167 (345)
                      +.|++++|++++++++-++++.+|+++++++++|+|-+..-..++.++++|..+.+..+   ...++.|.++++.+.++-
T Consensus       118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~v  197 (347)
T KOG1442|consen  118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAV  197 (347)
T ss_pred             ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988777   456889999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccc--cccCchhHHHHHHHHHHHHHHHHHHHH
Q 019191          168 SLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITT--YKMTSGAILFIFLSCALAVFCNVSQYL  245 (345)
Q Consensus       168 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
                      |+..++.||...+.+...+.+..|++..+.+..++...+.++.   +....  ..+...+|.++.+++++++..++...+
T Consensus       198 Alnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~---~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~  274 (347)
T KOG1442|consen  198 ALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEF---QAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGW  274 (347)
T ss_pred             HHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchH---HHHcCcccchHHHHHHHHHHHHHHHHHhhheeeE
Confidence            9999999987666666788899999988887776655443221   11111  224567888999999999999999999


Q ss_pred             hhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHhhcc
Q 019191          246 CIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQRNA  308 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~~~~  308 (345)
                      -+|-+||.++++-+..+.....+++..+++|..+..-|-|-.+++.|...|++.|++++++.+
T Consensus       275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999999999888766554

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.91  E-value=3e-23  Score=170.10  Aligned_cols=281  Identities=18%  Similarity=0.234  Sum_probs=242.5

Q ss_pred             HHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcccc
Q 019191           21 ISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNS  100 (345)
Q Consensus        21 ~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  100 (345)
                      ..|+.|++.||++++.  .||+-.+.+.+.|.+.+.+.+..+++.|..+.+..+.++|++.+++..+.++....+++|.+
T Consensus        16 ~sSIlmTltNKyVls~--~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~   93 (309)
T COG5070          16 FSSILMTLTNKYVLSN--LGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLA   93 (309)
T ss_pred             HHHHHHHHhhHheecC--CCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeee
Confidence            6889999999999999  55655688999999999888888877666665666778899999999999899999999999


Q ss_pred             hhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecccc-------ccchhHHHHHHHHHHHHHHHHH
Q 019191          101 VGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVK-------VNAKGFLCACVAVLSTSLQQIT  173 (345)
Q Consensus       101 ~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-------~~~~G~~~~l~a~~~~a~~~v~  173 (345)
                      ++.+++.+.++.+.++....++++.|.+..+..+.++.+..-....++|.+       .--.|++|....+++.+.+...
T Consensus        94 vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~  173 (309)
T COG5070          94 VPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLI  173 (309)
T ss_pred             eeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHH
Confidence            999999999999999999999999999999999999999999998888862       1126999999999999999999


Q ss_pred             HHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 019191          174 IGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSAT  253 (345)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (345)
                      .|+..+-.+....+.++|..+.+.-+++.+..+.|+|..++...  ..+...+..++.++++++...++.-|+++-+|.+
T Consensus       174 mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~an--nl~~d~l~am~ISgl~svgiSy~saWcvrVtSST  251 (309)
T COG5070         174 MRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLAN--NLSVDSLMAMFISGLCSVGISYCSAWCVRVTSST  251 (309)
T ss_pred             HHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhc--CCChHHHHHHHHHHHHHhhhhhccceeEeehhhh
Confidence            99876655667788999999999888888888888875543332  2333345578889999999999999999999999


Q ss_pred             hHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHh
Q 019191          254 SFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  305 (345)
Q Consensus       254 ~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~  305 (345)
                      +.++++.++.....+.|.++|+|+.+...+..+.+-..+..+|...+.++++
T Consensus       252 tySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         252 TYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             HHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999988888899887655433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=2e-21  Score=174.69  Aligned_cols=211  Identities=12%  Similarity=0.137  Sum_probs=154.9

Q ss_pred             HHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc-cccchhH
Q 019191           79 LWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV-KVNAKGF  157 (345)
Q Consensus        79 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~  157 (345)
                      ...++....+..+.+.++++.+++.++.+.++.|+++.+++++++|||+++.+|.|++++++|+.++..++. +.+..|+
T Consensus        67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~  146 (281)
T TIGR03340        67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAY  146 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHH
Confidence            334455667788889999999999999999999999999999999999999999999999999988764432 3455788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCHHH-HHHhhhHHHHHHH-HHHHHHhhhccCCccccccccCchhHHHHHHHHHH
Q 019191          158 LCACVAVLSTSLQQITIGSLQKKYSIGSFE-LLSKTAPIQAVSL-LVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  235 (345)
Q Consensus       158 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~v~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (345)
                      .++++++++|+.|.+..|+..++  .++.. ...+. ..+.+.. .+..+....... ...  ...+...+..+..+++.
T Consensus       147 ~~~l~aal~~a~~~i~~k~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~  220 (281)
T TIGR03340       147 AWALAAALGTAIYSLSDKAAALG--VPAFYSALGYL-GIGFLAMGWPFLLLYLKRHG-RSM--FPYARQILPSATLGGLM  220 (281)
T ss_pred             HHHHHHHHHHHHhhhhccccccc--hhcccccHHHH-HHHHHHHHHHHHHHHHHHhc-cch--hhhHHHHHHHHHHHHHH
Confidence            89999999999999988875332  22211 11111 1112111 122221111000 000  01112223445556666


Q ss_pred             HHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHH
Q 019191          236 AVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVI  295 (345)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l  295 (345)
                      +...+...++.+++.++...+.+.+++|+++.++|++++||+++..+++|.++++.|+.+
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            667777788899999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.86  E-value=3.3e-19  Score=158.26  Aligned_cols=228  Identities=12%  Similarity=0.055  Sum_probs=154.8

Q ss_pred             HHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHH--hcCCC----CCCCCchh----HHHHHHHHHHHHHhhhhhhh
Q 019191           27 IMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSN--ATGLS----ASKHVPLW----ELLWFSIVANMSIAGMNFSL   96 (345)
Q Consensus        27 ~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~--~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~al   96 (345)
                      .+..|+ +.+    ++ |..+.++|++++.+++.++.  +.+++    +.++.+++    .....+++...+..+.++|+
T Consensus        18 ~~~~k~-~~~----~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~   91 (256)
T TIGR00688        18 YYYSKL-LKP----LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAV   91 (256)
T ss_pred             HHHHHH-hcc----CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            366887 556    89 99999999999887655432  22111    01111122    23445666777888999999


Q ss_pred             cccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccccccchhHHHHHHHHHHHHHHHHHHHH
Q 019191           97 MLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVNAKGFLCACVAVLSTSLQQITIGS  176 (345)
Q Consensus        97 ~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~  176 (345)
                      ++++++.++++.++.|+++++++++++|||+++++|++++++++|++++..++.+.+    .++++++++||.|.+..|+
T Consensus        92 ~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~  167 (256)
T TIGR00688        92 NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKA  167 (256)
T ss_pred             HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999987654332222    4678999999999999998


Q ss_pred             HhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHh
Q 019191          177 LQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQ  256 (345)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (345)
                      ..++   +..+....+. .......+. .....+..   ....+ +...|..++..++.+...+.+.+.++++.++...+
T Consensus       168 ~~~~---~~~~~~~~~~-~~~~~~~~~-~~~~~~~~---~~~~~-~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s  238 (256)
T TIGR00688       168 LKNT---DLAGFCLETL-SLMPVAIYY-LLQTDFAT---VQQTN-PFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLG  238 (256)
T ss_pred             cCCC---CcchHHHHHH-HHHHHHHHH-HHHhccCc---ccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence            6432   2222221111 111111111 11111110   00001 11133444445555667777788899999999999


Q ss_pred             HHhhHHHHHHHHhhHhh
Q 019191          257 VLGHMKTVCVLTLGWLL  273 (345)
Q Consensus       257 ~~~~l~pv~~~~~s~l~  273 (345)
                      ++.+++|+++.+++.+.
T Consensus       239 ~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       239 LLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.85  E-value=1.8e-18  Score=156.00  Aligned_cols=256  Identities=18%  Similarity=0.152  Sum_probs=182.9

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCC--CCCCCCchhH-HHHHHHHHHHHHhhhhhhhcccchhHH
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGL--SASKHVPLWE-LLWFSIVANMSIAGMNFSLMLNSVGFY  104 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~~~~s~~  104 (345)
                      ...|...++   ..+ +......|.+.+.+......+++.  ..+.+.+++. .+..++.......+.+.++++++++.+
T Consensus        24 ~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (292)
T COG0697          24 IALKLAVES---LDP-FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVA   99 (292)
T ss_pred             HHHHHHhcc---cCC-hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence            445555443   133 555566699988877443443322  1222222223 334445566677888889999999999


Q ss_pred             HHHhhhhHHHHHHHHH-HHhccccChhhhhhhhhhhhcceeeeecccccc---chhHHHHHHHHHHHHHHHHHHHHHhhh
Q 019191          105 QISKLSMIPVVCVMEW-ILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVN---AKGFLCACVAVLSTSLQQITIGSLQKK  180 (345)
Q Consensus       105 ~~l~~~~p~~~~~l~~-l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~v~~~~~~~~  180 (345)
                      +++.++.|+++.++++ +++|||+++.++.+++++++|+.++..++...+   ..|..+++.+++++|.+.+..|+..  
T Consensus       100 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~--  177 (292)
T COG0697         100 SLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS--  177 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            9999999999999997 777999999999999999999999988776443   5899999999999999999999876  


Q ss_pred             cCCCHHHHHH-hhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHH-HHHHHHHHhhcccCchhHhHH
Q 019191          181 YSIGSFELLS-KTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAV-FCNVSQYLCIGRFSATSFQVL  258 (345)
Q Consensus       181 ~~~~~~~~~~-~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  258 (345)
                       +.++..... +...  ...+..........    .   .+.+...+..+...++.+. ..+...++.+++.++...+.+
T Consensus       178 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (292)
T COG0697         178 -RLGPVTLALLLQLL--LALLLLLLFFLSGF----G---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALL  247 (292)
T ss_pred             -CCChHHHHHHHHHH--HHHHHHHHHHhccc----c---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence             234444444 3322  11111111111110    1   1222233344444554444 466677789999999999999


Q ss_pred             hhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          259 GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       259 ~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      .+++|+++.++++++++|+++..+++|..+++.|+.+.+..
T Consensus       248 ~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         248 SLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999998765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.82  E-value=1.9e-17  Score=142.65  Aligned_cols=283  Identities=11%  Similarity=0.038  Sum_probs=202.2

Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh--cCCCC--CCCCchh
Q 019191            1 METEKKSSVVSDVGAWAMNVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA--TGLSA--SKHVPLW   76 (345)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~--~~~~~--~~~~~~~   76 (345)
                      |+++.+++.+..+.+...++..    .+..|.+ +.    .| +..+.+.|..-+...+.+...  +++++  ....+++
T Consensus         1 ~~~~~~~Gil~~l~Ay~lwG~l----p~y~kll-~~----~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~   70 (293)
T COG2962           1 MAKDSRKGILLALLAYLLWGLL----PLYFKLL-EP----LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPK   70 (293)
T ss_pred             CCCcccchhHHHHHHHHHHHHH----HHHHHHH-cc----CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcH
Confidence            5666677777777666644443    4556665 45    78 999999999988776554322  22211  1122233


Q ss_pred             H---HHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecccccc
Q 019191           77 E---LLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVN  153 (345)
Q Consensus        77 ~---~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~  153 (345)
                      +   ....++....+...+.+|...-.+-.+++=...+|++.++++++++|||+|+.||++++++.+||..-.....+.+
T Consensus        71 ~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp  150 (293)
T COG2962          71 TLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP  150 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            3   3334555666777888888888888889999999999999999999999999999999999999999888888888


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  233 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (345)
                      +....++    ++|++|...-|+.    +.++.+-...-+..-....+......+..   .. .....+...+.++...|
T Consensus       151 wval~la----~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~---~~-~~~~~~~~~~~LLv~aG  218 (293)
T COG2962         151 WVALALA----LSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADS---GQ-FLQQNANSLWLLLVLAG  218 (293)
T ss_pred             HHHHHHH----HHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcC---ch-hhhcCCchHHHHHHHhh
Confidence            7766655    4999999766553    45666655444332222222222222211   11 11112344455666777


Q ss_pred             HHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHHHh
Q 019191          234 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAEKQ  305 (345)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~~~  305 (345)
                      ..+..--.+....-++.+-...++..|++|....+++++++||+++..+....+.+..|+.+|..+..++++
T Consensus       219 ~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r  290 (293)
T COG2962         219 LVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR  290 (293)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            766665555556789999999999999999999999999999999999999999999999999988765444

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.81  E-value=1.7e-17  Score=142.92  Aligned_cols=262  Identities=16%  Similarity=0.153  Sum_probs=215.5

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCchhHHHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHH
Q 019191           39 YAFSFATTLTGFHFAVTALVGLVSNATGL-SASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCV  117 (345)
Q Consensus        39 ~~~~~P~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~  117 (345)
                      -.|..|.++.+.|-+.+.+........+. ..+.+.++.+....++....+..+++-|++|++-++..+.+++--+-+++
T Consensus        46 ~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   46 ERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            34666999999999999888766554322 23444567777778888888999999999999999999999999999999


Q ss_pred             HHHHHhccccChhhhhhhhhhhhcceeeeeccc---------cccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHH
Q 019191          118 MEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV---------KVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFEL  188 (345)
Q Consensus       118 l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~  188 (345)
                      .+.++.++|++..+.+...++..|+.+....+.         +.+.+|+.+.....+..++.+..++++.++++.++..+
T Consensus       126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~m  205 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHM  205 (327)
T ss_pred             HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHH
Confidence            999999999999999999999999988654321         35678999999999999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHH
Q 019191          189 LSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLT  268 (345)
Q Consensus       189 ~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~  268 (345)
                      +++.+++.++.-.... +...... +.+.....++..+.-+..-+.++...+...|+-+++.++.+.+.....+.++++.
T Consensus       206 M~~vNLf~~i~~~~~l-i~qg~~~-~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~  283 (327)
T KOG1581|consen  206 MFGVNLFSAILNGTYL-ILQGHLL-PAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIM  283 (327)
T ss_pred             HHHHHHHHHHHHHHhh-hcCCCCc-hHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHH
Confidence            9999998887766552 2211111 1111112345566677777888888888888889999999999999999999999


Q ss_pred             hhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          269 LGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       269 ~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      ++.+.++.+++..|++|..++..|+.+-.+.+++
T Consensus       284 lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  284 LSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999887666555

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.81  E-value=2.4e-17  Score=145.91  Aligned_cols=278  Identities=12%  Similarity=0.083  Sum_probs=207.5

Q ss_pred             HHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcC--C--CC-CCCC---------chhHHHHHHHHH
Q 019191           20 VISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATG--L--SA-SKHV---------PLWELLWFSIVA   85 (345)
Q Consensus        20 ~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~--~--~~-~~~~---------~~~~~~~~~~~~   85 (345)
                      .+.+.++....||.-++++..|. |.+..++-=.+-.+++.....++  .  .+ .+..         +-.++...+++|
T Consensus        24 t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iY  102 (345)
T KOG2234|consen   24 TAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIY  102 (345)
T ss_pred             HHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHH
Confidence            35677888899999888655566 66666555444444433322111  1  11 1111         123455667788


Q ss_pred             HHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc-----------ccccc
Q 019191           86 NMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-----------VKVNA  154 (345)
Q Consensus        86 ~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-----------~~~~~  154 (345)
                      .+.+-+.+.++.+.+++++++...+..+.|+++.++++++|.++.||.++++.++|+.+...+.           .+..+
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~  182 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF  182 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence            8877789999999999999999999999999999999999999999999999999999976221           13456


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHH
Q 019191          155 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  234 (345)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (345)
                      .|....+.++++.++..++.+|++|+.+.+.+........++.++.+......|.......-.-..|+...|..++..++
T Consensus       183 ~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~  262 (345)
T KOG2234|consen  183 LGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAV  262 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhc
Confidence            89999999999999999999999988777766666555555665555544443322111011113466677778888877


Q ss_pred             HHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          235 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      .|.+..+.    +|+.+...-+....+..+++.+.|+.+++-++|....+|..+++.++.+|+..+.+
T Consensus       263 gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  263 GGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             cchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            77776655    78899999999999999999999999999999999999999999999999955444

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.1e-18  Score=144.61  Aligned_cols=258  Identities=14%  Similarity=0.102  Sum_probs=207.5

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHhcCCC-CCCCCchhHHHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHH
Q 019191           41 FSFATTLTGFHFAVTALVGLVSNATGLS-ASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVME  119 (345)
Q Consensus        41 ~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~  119 (345)
                      |.+...+.+.|..+..+..-++...+.. +..+.+-+.....++-+.+.....|.+++|++-++.-+-+++.|+-+++++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG  129 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG  129 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence            6677888899998888877655443322 223334455667788899999999999999999999999999999999999


Q ss_pred             HHHhccccChhhhhhhhhhhhcceeeeeccc-------cccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhh
Q 019191          120 WILHNKHYSKEVKMAVVVVVIGVGVCTITDV-------KVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKT  192 (345)
Q Consensus       120 ~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~  192 (345)
                      +++.|+++++.+..+++.+++|+++..+++.       +....|-++.+++--..+.....++++.+.+..+...+++++
T Consensus       130 Vl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~  209 (337)
T KOG1580|consen  130 VLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYT  209 (337)
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHH
Confidence            9999999999999999999999999877643       223478899999999999999999998887777888899999


Q ss_pred             hHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHh
Q 019191          193 APIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWL  272 (345)
Q Consensus       193 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l  272 (345)
                      ++++.+.+-....+..+.  ++......-.+..++-+.+.++++.+.+...+..+...+|.+-+++...+..++++.|++
T Consensus       210 NlwStL~Lg~g~lfTGEl--weF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl  287 (337)
T KOG1580|consen  210 NLWSTLYLGAGLLFTGEL--WEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL  287 (337)
T ss_pred             HHHHHHHhhhhheehhhH--HHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence            999887765443333211  112211122345566777778888888888888899999999999999999999999999


Q ss_pred             hcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          273 LFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       273 ~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      +++++++.+||+|.+++..|...-....
T Consensus       288 lf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  288 LFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             HhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            9999999999999999999988755443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.78  E-value=6.7e-17  Score=135.63  Aligned_cols=250  Identities=12%  Similarity=0.078  Sum_probs=189.6

Q ss_pred             HHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcccchhHHHHHh
Q 019191           29 ANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQISK  108 (345)
Q Consensus        29 ~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~  108 (345)
                      +.|.++..    +. |.-.+++|..++++++..+.|-.+++..+.+|+.+..+|+..+..+.++|.+++.++.+.+..+-
T Consensus        30 ~Ak~LFP~----vG-~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE  104 (292)
T COG5006          30 FAKSLFPL----VG-AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE  104 (292)
T ss_pred             HHHHHccc----cC-hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence            47777777    78 99999999999999888776533344455577888899999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc---ccccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCH
Q 019191          109 LSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD---VKVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGS  185 (345)
Q Consensus       109 ~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~  185 (345)
                      .+.|+.++.++    .+|.+-.-|+  .+++.|+.+.....   .+.|..|..+++.+..+|+.|.+..||.-+  ..+.
T Consensus       105 F~GPL~vA~~~----sRr~~d~vwv--aLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g  176 (292)
T COG5006         105 FTGPLAVALLS----SRRLRDFVWV--ALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHG  176 (292)
T ss_pred             hccHHHHHHHh----ccchhhHHHH--HHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCC
Confidence            99999988765    4555444454  45566665543322   456889999999999999999999998764  3456


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHH-HHHHHhhcccCchhHhHHhhHHHH
Q 019191          186 FELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCN-VSQYLCIGRFSATSFQVLGHMKTV  264 (345)
Q Consensus       186 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~pv  264 (345)
                      .+.+...+.++++..+++.....        .+.-+++..+..-...++++...- .+--.++++.+..++++...++|.
T Consensus       177 ~~g~a~gm~vAaviv~Pig~~~a--------g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa  248 (292)
T COG5006         177 TAGVAVGMLVAALIVLPIGAAQA--------GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPA  248 (292)
T ss_pred             chHHHHHHHHHHHHHhhhhhhhc--------chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHH
Confidence            66677777777777766654211        111233444444444455555443 333457999999999999999999


Q ss_pred             HHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          265 CVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       265 ~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      ++.+.|++++||.+|+.|++|++.++.+..-.++.
T Consensus       249 ~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         249 LAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999988765543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.78  E-value=1.8e-17  Score=144.70  Aligned_cols=210  Identities=13%  Similarity=0.072  Sum_probs=168.0

Q ss_pred             hhHHHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc----
Q 019191           75 LWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV----  150 (345)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----  150 (345)
                      ..++...++++...+.+.+.++++++++++|++.++..++|++++++++|+|.++.||.++.+.++|+.+...++.    
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~   96 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSD   96 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccc
Confidence            3456677888999999999999999999999999999999999999999999999999999999999999654321    


Q ss_pred             -------------cccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCcccc
Q 019191          151 -------------KVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFIT  217 (345)
Q Consensus       151 -------------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~  217 (345)
                                   .....|..+.++++++.++..++.||++|+.+.+.+.........+.++.++.....+.....+.-.
T Consensus        97 ~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~  176 (244)
T PF04142_consen   97 NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF  176 (244)
T ss_pred             cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Confidence                         1134799999999999999999999999987766666666666666666655544433221111111


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHH
Q 019191          218 TYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMIL  288 (345)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~l  288 (345)
                      ...|+...|..++..++.|......    +|+.+...-+....+..+++.+.++++|+.++|...++|..+
T Consensus       177 f~G~~~~~~~~i~~~a~gGllva~v----~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  177 FHGYSWWVWIVIFLQAIGGLLVAFV----LKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             hhhcchHHHHHHHHHHHhhHHHHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            1245566666666666666665544    899999999999999999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.77  E-value=5.2e-17  Score=138.01  Aligned_cols=271  Identities=16%  Similarity=0.153  Sum_probs=200.8

Q ss_pred             HHHHHHhhc---cCCcccchhhHHHHHHHHHHHHHHHH---HHhcCCCC-------------CCCCchhHHHHHHHHHHH
Q 019191           27 IMANKQLMS---SSGYAFSFATTLTGFHFAVTALVGLV---SNATGLSA-------------SKHVPLWELLWFSIVANM   87 (345)
Q Consensus        27 ~~~~K~~l~---~~~~~~~~P~~l~~~r~~~~~~~l~~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~   87 (345)
                      ++..||.=+   ++..+|+.|+..+..-++--+..+.+   ++++...+             +++.+...+++.++|-..
T Consensus        19 tl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~   98 (372)
T KOG3912|consen   19 TLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIA   98 (372)
T ss_pred             HHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHh
Confidence            356788733   22345776776655544433333332   22221111             012233446788999999


Q ss_pred             HHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc----------cccchhH
Q 019191           88 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV----------KVNAKGF  157 (345)
Q Consensus        88 ~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----------~~~~~G~  157 (345)
                      +..+.|.++.+++++.+|+++....+|+.+++.-+++++++..||+|+.....|++++...|.          +.-..|+
T Consensus        99 gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGd  178 (372)
T KOG3912|consen   99 GSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGD  178 (372)
T ss_pred             hhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhh
Confidence            999999999999999999999999999999999999999999999999999999998765532          2335799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCcccccc------cc-------C-c
Q 019191          158 LCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTY------KM-------T-S  223 (345)
Q Consensus       158 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~------~~-------~-~  223 (345)
                      .+.+.+-+.-|.+.++.+|..++.+.+|.+...|...++.+++.+....+...+.++..+..      +|       . .
T Consensus       179 llIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~  258 (372)
T KOG3912|consen  179 LLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQES  258 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999977776655544332222111110      01       0 1


Q ss_pred             hhHHHHHHHH-HH-HHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          224 GAILFIFLSC-AL-AVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       224 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      ..+ .+...+ .. -.+.|+......|..|+++-.+...++..+..+++..+..|.++..|+.|.++.+.|..+|+-
T Consensus       259 p~l-~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  259 PSL-AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             chh-HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111 222222 22 223566667778999999999999999999999999999999999999999999999999984

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.75  E-value=7.6e-16  Score=138.73  Aligned_cols=245  Identities=13%  Similarity=0.102  Sum_probs=172.3

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh-cCCCCCCCCchhHHHHHHHH----HHHHHhhhhhhhcccchh
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA-TGLSASKHVPLWELLWFSIV----ANMSIAGMNFSLMLNSVG  102 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~al~~~~~s  102 (345)
                      +..|..- .    .+ |.+..  |..++.+++..... .+..   +.+.++....+++    ...++.+++.+.++++++
T Consensus        18 ~~~k~~~-g----~~-~~~~~--~~~~g~l~~~~~~~~~~~~---~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva   86 (290)
T TIGR00776        18 LINVKIG-G----GP-YSQTL--GTTFGALILSIAIAIFVLP---EFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVS   86 (290)
T ss_pred             HHHhccC-C----CH-HHHHH--HHHHHHHHHHHHHHHHhCC---cccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHH
Confidence            4456543 3    66 44443  67666665543322 1211   1233444444444    556678888899999999


Q ss_pred             HHHHHhh-hhHHHHHHHHHHHhccccChhh----hhhhhhhhhcceeeeecccc-------cc-chhHHHHHHHHHHHHH
Q 019191          103 FYQISKL-SMIPVVCVMEWILHNKHYSKEV----KMAVVVVVIGVGVCTITDVK-------VN-AKGFLCACVAVLSTSL  169 (345)
Q Consensus       103 ~~~~l~~-~~p~~~~~l~~l~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l~a~~~~a~  169 (345)
                      .+..+.+ +.|++..+.+.+++|||.++++    +.|++++++|+.+....+.+       .+ ..|.++++.++++|+.
T Consensus        87 ~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~  166 (290)
T TIGR00776        87 KTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLV  166 (290)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHH
Confidence            9998888 8888999999999999999999    99999999999987654321       23 5799999999999999


Q ss_pred             HHHHHHHHhhhcCCCHHHHHHhh---hHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHh
Q 019191          170 QQITIGSLQKKYSIGSFELLSKT---APIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLC  246 (345)
Q Consensus       170 ~~v~~~~~~~~~~~~~~~~~~~~---~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (345)
                      |.+..|+.    +.++....+.+   ...+++......  .+   .    .  ++.....+.....++.....+...+..
T Consensus       167 ~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~~---~----~--~~~~~~~~~~~~~Gi~~~ia~~~y~~~  231 (290)
T TIGR00776       167 YVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--IL---A----K--PLKKYAILLNILPGLMWGIGNFFYLFS  231 (290)
T ss_pred             HHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--hc---c----c--chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999974    25666663333   333333222211  00   0    0  111112222333555555556666677


Q ss_pred             hc-ccCchhHhHHhhHHHHHHHHhhHhhcCCcccccch----hhHHHHhHHHHHhhh
Q 019191          247 IG-RFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNI----SGMILAVVGMVIYSW  298 (345)
Q Consensus       247 ~~-~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~i----iG~~lii~G~~l~~~  298 (345)
                      .+ +.++..+++..+++|+.+.+++++++||+.++.|+    +|.++++.|+.+...
T Consensus       232 ~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       232 AQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            78 99999999999999999999999999999999999    999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.74  E-value=6.9e-19  Score=148.42  Aligned_cols=266  Identities=13%  Similarity=0.089  Sum_probs=194.5

Q ss_pred             HHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh--cCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhc
Q 019191           20 VISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA--TGLSASKHVPLWELLWFSIVANMSIAGMNFSLM   97 (345)
Q Consensus        20 ~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~   97 (345)
                      ++.+.+|++..|.+.      ++ |..+...|++.-.++......  +...--++-+++.+..-++....+....+||++
T Consensus        47 ~ff~~~~vv~t~~~e------~~-p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~  119 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLE------ND-PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALM  119 (346)
T ss_pred             HHHhhHHHhhhhhhc------cC-hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHh
Confidence            456666777777553      44 888888886665555443321  111111222333445567888888999999999


Q ss_pred             ccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc-----c---------cccchhHHHHHHH
Q 019191           98 LNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD-----V---------KVNAKGFLCACVA  163 (345)
Q Consensus        98 ~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-----~---------~~~~~G~~~~l~a  163 (345)
                      |++.+.+.++..++|.+|.++++.++|||+++.+.++..+.+.|++++..+.     .         +.+..|-..++.+
T Consensus       120 ~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s  199 (346)
T KOG4510|consen  120 YMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISS  199 (346)
T ss_pred             hcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHh
Confidence            9999999999999999999999999999999999999999999999975431     1         2355788888999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHH
Q 019191          164 VLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQ  243 (345)
Q Consensus       164 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
                      ++.-|--.++.|++-|+  .+......|...++.+..++......     +.  ..+.....++++...++.|+..+...
T Consensus       200 ~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig-----~~--~lP~cgkdr~l~~~lGvfgfigQIll  270 (346)
T KOG4510|consen  200 VLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIG-----AV--QLPHCGKDRWLFVNLGVFGFIGQILL  270 (346)
T ss_pred             HhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcc-----ce--ecCccccceEEEEEehhhhhHHHHHH
Confidence            99888888999987663  45555555665555554444332221     11  11222334456667778888888777


Q ss_pred             HHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          244 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       244 ~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      ...+++=.+-..++..+..-+++.++.+++|||.+++.+++|+++++.+.++....|.
T Consensus       271 Tm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  271 TMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             HHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            7777777777778889999999999999999999999999999999988887654433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.74  E-value=4.6e-17  Score=143.90  Aligned_cols=224  Identities=15%  Similarity=0.063  Sum_probs=174.8

Q ss_pred             HHHHHHHHHHH----HHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc--
Q 019191           77 ELLWFSIVANM----SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--  150 (345)
Q Consensus        77 ~~~~~~~~~~~----~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--  150 (345)
                      +....++++|.    .....|.|+.|++++..+++.+++-+||.+++..+..||+++.|.+++.+.++|+++++.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            45566666664    556677799999999999999999999999999999999999999999999999999987743  


Q ss_pred             ------cccchhHHHHHHHHHHHHHHHHHHHHHhhhc--CCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccC
Q 019191          151 ------KVNAKGFLCACVAVLSTSLQQITIGSLQKKY--SIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMT  222 (345)
Q Consensus       151 ------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~  222 (345)
                            +....|.++++.++++||.|.++.||...++  ++|...+..+..++..+.+-+...+.+..  +....+.+..
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~--~~e~F~lP~~  314 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF--GEERFELPSS  314 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh--ccCcccCCCC
Confidence                  3346899999999999999999999977554  55666666666555555554444444433  1111111222


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          223 SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      ...-.++..+++..+..-+.+.++.-.++|..+.+-..++.+.+++...++-+.++|+.+++|...+..|.+..++..+.
T Consensus       315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            22223444555666677777778888999999999999999999999999889999999999999999999998876543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.73  E-value=8.3e-17  Score=136.14  Aligned_cols=270  Identities=17%  Similarity=0.141  Sum_probs=216.6

Q ss_pred             HHHHHhhccCCcccc-hhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcccchhHHHH
Q 019191           28 MANKQLMSSSGYAFS-FATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVGFYQI  106 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~-~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~  106 (345)
                      ....++.+.  .||. +-+.++..|+++-..+.++-.+.-..+++..+||....++.+......+.|-++.|++-++--+
T Consensus        60 y~qElif~~--~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQvi  137 (367)
T KOG1582|consen   60 YLQELIFNV--EGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVI  137 (367)
T ss_pred             HHHHHHhcc--ccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHH
Confidence            457777777  6665 5789999999887655554433323345567889888999998899999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc----cccchhHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 019191          107 SKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV----KVNAKGFLCACVAVLSTSLQQITIGSLQKKYS  182 (345)
Q Consensus       107 l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  182 (345)
                      .+++..+-+++.+.++-++|+.+....+..+..+|++..+..|.    ++|..|+.+.-+|-++.|.-...+++.++.++
T Consensus       138 FKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~  217 (367)
T KOG1582|consen  138 FKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP  217 (367)
T ss_pred             HHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC
Confidence            99999999999999999999999999999999999999887664    67889999999999999999999999998888


Q ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHH
Q 019191          183 IGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMK  262 (345)
Q Consensus       183 ~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  262 (345)
                      -++.++++|...++.++++.......+... .+....+.+........+-.+.+++........++-.++..++.+++.+
T Consensus       218 ~ss~EmvfySy~iG~vflf~~mvlTge~f~-a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaR  296 (367)
T KOG1582|consen  218 ASSSEMVFYSYGIGFVFLFAPMVLTGELFS-AWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTAR  296 (367)
T ss_pred             CCcceEEEeeecccHHHHHHHHHhcccchh-hhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhH
Confidence            888999999988888877654433321111 1111112233344455555666666655555678999999999999999


Q ss_pred             HHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          263 TVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       263 pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      .-.++++|+++|..++|....-|..++..|+++-.+.+
T Consensus       297 KavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  297 KAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999966654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.73  E-value=3.8e-17  Score=138.67  Aligned_cols=258  Identities=17%  Similarity=0.227  Sum_probs=201.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHH-hcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcc-cchhHHHHHhhhhHHHHHHHHHH
Q 019191           44 ATTLTGFHFAVTALVGLVSN-ATGLSASKHVPLWELLWFSIVANMSIAGMNFSLML-NSVGFYQISKLSMIPVVCVMEWI  121 (345)
Q Consensus        44 P~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~s~~~~l~~~~p~~~~~l~~l  121 (345)
                      -.++++.|+++-+.-.++.. +... .+++.+.+.....-..+......+|+++++ ++.+..-+.++.+++.+++++++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~i  111 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWI  111 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccccc-cCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHH
Confidence            35788999987766544432 2222 236778888888877787888899999999 99999999999999999999999


Q ss_pred             HhccccChhhhhhhhhhhhcceeeeeccc-----------------ccc--chhHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 019191          122 LHNKHYSKEVKMAVVVVVIGVGVCTITDV-----------------KVN--AKGFLCACVAVLSTSLQQITIGSLQKKYS  182 (345)
Q Consensus       122 ~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----------------~~~--~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  182 (345)
                      +.|+|++..|+.++.+..+|+++++..+.                 +..  ..|..+...+.+..|...++++...|+++
T Consensus       112 l~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG  191 (330)
T KOG1583|consen  112 LLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG  191 (330)
T ss_pred             hccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999765321                 011  15889999999999999999999999999


Q ss_pred             CCHHHHHHhhhHHHHHHHHHHH-HHhhhcc---CCcc--cccccc-CchhHHHHHHHHHHHHHHHHHHHHhhcccCchhH
Q 019191          183 IGSFELLSKTAPIQAVSLLVLG-PFVDYYL---NGKF--ITTYKM-TSGAILFIFLSCALAVFCNVSQYLCIGRFSATSF  255 (345)
Q Consensus       183 ~~~~~~~~~~~~~~~v~l~~~~-~~~~~~~---~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
                      .++-+.++|+...+.-.++... .+...+.   ..+.  ...... -+..|..++..++..++.--..|.+-.+.++.+.
T Consensus       192 Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTV  271 (330)
T KOG1583|consen  192 KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTV  271 (330)
T ss_pred             CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEE
Confidence            9999999999865443222211 1111110   0110  001111 2456678888999988888878888899999999


Q ss_pred             hHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          256 QVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       256 ~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      +++-+++..+..++|...|++++|+.+|+|..++..|..+|.-...+
T Consensus       272 TlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  272 TLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH  318 (330)
T ss_pred             EEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999755443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.70  E-value=3e-16  Score=128.10  Aligned_cols=143  Identities=30%  Similarity=0.485  Sum_probs=125.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhh-----cCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccc---c--Cchh
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKK-----YSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYK---M--TSGA  225 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~---~--~~~~  225 (345)
                      |+++++.++++.|+++++.|++.++     .+.++.+++.|+++.+.+.+++..++.|+...........   .  +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999998877     5899999999999999999999998887653222221111   1  3356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          226 ILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      +..++.+++.+++.++..+.+++++||++.++.+.+|.+..++.|+++++|++|..+++|.++.+.|+.+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            6788899999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.67  E-value=5.9e-17  Score=135.95  Aligned_cols=263  Identities=16%  Similarity=0.136  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhcccchh
Q 019191           23 SVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWELLWFSIVANMSIAGMNFSLMLNSVG  102 (345)
Q Consensus        23 s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s  102 (345)
                      +.+..+.+.++-+.   +.+.|...++..+..-+++--.+...|. +.-+..|++.+.+++.-.-++++-..|.||++..
T Consensus        30 ~t~~a~tss~la~k---~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmt  105 (336)
T KOG2766|consen   30 ITSTAFTSSELARK---GINAPTSQTFLNYVLLALVYGPIMLFRR-KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMT  105 (336)
T ss_pred             HHcchhhhHHHHhc---cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHHHHHHHHhhheeEEeecccEEEeeehhhcchH
Confidence            33445666776655   4666888888888665554332222221 3334456776666666666666677799999999


Q ss_pred             HHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc--------cccchhHHHHHHHHHHHHHHHHHH
Q 019191          103 FYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--------KVNAKGFLCACVAVLSTSLQQITI  174 (345)
Q Consensus       103 ~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~v~~  174 (345)
                      ..+.+..-..+.+.+++|+++|.|+++.|+.|++++.+|+.++.+.|.        +....|+++.++++-+||..|+..
T Consensus       106 Si~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~E  185 (336)
T KOG2766|consen  106 SIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSE  185 (336)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccH
Confidence            999999999999999999999999999999999999999999887662        345689999999999999999999


Q ss_pred             HHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q 019191          175 GSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATS  254 (345)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (345)
                      +.+.|  +.+..+++....++++++..+- ++.|.    ......+|+......+. ..++-++.+...-..+|..|++.
T Consensus       186 Eflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~----~~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~  257 (336)
T KOG2766|consen  186 EFLVK--NADRVELMGFLGLFGAIISAIQ-FIFER----HHVSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATM  257 (336)
T ss_pred             HHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhc----cceeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceE
Confidence            99888  5678888888888888877765 44443    24445566543332332 44444444444556789999999


Q ss_pred             HhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          255 FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       255 ~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      .++-.......+++.  ..||-+.+|..++..+.+..|.++|..+
T Consensus       258 ~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  258 FNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             EEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            999888888888887  5688889999999999999999999543

>TIGR00803 nst UDP-galactose transporter

Probab=99.24  E-value=2.9e-11  Score=104.89  Aligned_cols=189  Identities=13%  Similarity=0.115  Sum_probs=120.4

Q ss_pred             chhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceee--------------------eeccc-------cc
Q 019191          100 SVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC--------------------TITDV-------KV  152 (345)
Q Consensus       100 ~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~--------------------~~~~~-------~~  152 (345)
                      +++.....++..++++++..+.+.++|++..|+++.++...|+...                    ..++.       ..
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            4555666777777777777777777777777777777777776642                    11111       12


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccc----cccCchhHHH
Q 019191          153 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITT----YKMTSGAILF  228 (345)
Q Consensus       153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  228 (345)
                      .+.|....+.+..+.++..+++++..|+++.............+.+... ..   +.....+....    .+++...+..
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~  158 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTF-SV---LLWSDGTLISNFGFFIGYPTAVWIV  158 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHH-HH---HhhcccchhhccCcccCCchHHHHH
Confidence            3467777888888889999999987664433222222222222222111 11   11111111111    1233334444


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHh
Q 019191          229 IFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIY  296 (345)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~  296 (345)
                      ++...+.+.    +..+.+++.+++..++...++++++.++|++++||+++..+++|..+++.|+.+|
T Consensus       159 ~~~~a~~~~----~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       159 GLLNVGGGL----CIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHhcCc----eeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            433333333    3456799999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.20  E-value=1.8e-10  Score=87.11  Aligned_cols=135  Identities=16%  Similarity=0.180  Sum_probs=106.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHH
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  235 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (345)
                      -.++++++++.+++..+..|--.+  +.||...+..-+....+++........     +.....+.+...|..++.+++.
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g-----~~~~~~~~~~k~~lflilSGla   76 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTG-----NWQAGGEIGPKSWLFLILSGLA   76 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcC-----ceecccccCcceehhhhHHHHH
Confidence            357899999999999999997666  466766666665555555554443332     2222222344455788889999


Q ss_pred             HHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          236 AVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      +...++++|++++.-.++.....+-..|++++++|+++++|++|..+++|.++|.+|..+..
T Consensus        77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999999999987643

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.18  E-value=6.6e-11  Score=92.70  Aligned_cols=113  Identities=14%  Similarity=0.224  Sum_probs=90.7

Q ss_pred             HHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHH--hcCC--CCCCCCchhHHHHHHHH-HHHHHhhhhhhhcccch
Q 019191           27 IMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSN--ATGL--SASKHVPLWELLWFSIV-ANMSIAGMNFSLMLNSV  101 (345)
Q Consensus        27 ~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~--~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~  101 (345)
                      .+.+|...++    +| |....++|+..+.+ +....  ..+.  .+.++.++......+++ ...+..+.++++++.++
T Consensus         7 ~~~~k~~~~~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   80 (126)
T PF00892_consen    7 SVFSKKLLKK----IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISA   80 (126)
T ss_pred             HHHHHHHhcc----CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence            4679999998    99 99999999999986 33322  2111  12222333445555655 57788899999999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceee
Q 019191          102 GFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC  145 (345)
Q Consensus       102 s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~  145 (345)
                      +.++++.++.|+++.+++++++|||+++.++.|++++++|+.+.
T Consensus        81 ~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   81 SIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999765

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.11  E-value=5.5e-10  Score=87.41  Aligned_cols=124  Identities=21%  Similarity=0.339  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHH-HHHHHHHHHHHHH
Q 019191          165 LSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIF-LSCALAVFCNVSQ  243 (345)
Q Consensus       165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  243 (345)
                      ++||.+.+..|+..++  .++.....+....+.+ +++.....+...      ...++...+.... .+.+.....+...
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHHHH
Confidence            4688899999998874  7899999999888887 555555543221      1122222223333 3334456677777


Q ss_pred             HHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          244 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       244 ~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      ++++++.++...+...+++|+++.++++++++|++++.+++|.++++.|+.+.+
T Consensus        72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.05  E-value=3.6e-09  Score=80.12  Aligned_cols=116  Identities=13%  Similarity=0.083  Sum_probs=94.8

Q ss_pred             HHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh-cCC-CCCCCCchhH---HHHHHHHHHHHHhhhhhhhcccch
Q 019191           27 IMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA-TGL-SASKHVPLWE---LLWFSIVANMSIAGMNFSLMLNSV  101 (345)
Q Consensus        27 ~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~-~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~al~~~~~  101 (345)
                      .++.|..+++    .+ |.+.+..|..+..+.+..... .+. ......+.|.   +...|+....+..+++++++.-.+
T Consensus        19 ~iF~KIGl~~----vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~a   93 (140)
T COG2510          19 PIFAKIGLEG----VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKA   93 (140)
T ss_pred             HHHHHHhccc----cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCc
Confidence            4779999998    99 999999999988776665433 232 2232233333   444566677889999999999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeee
Q 019191          102 GFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI  147 (345)
Q Consensus       102 s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~  147 (345)
                      |.+.-+..++|++++++++++++||+|..+|+|++++.+|+++++.
T Consensus        94 s~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          94 SRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             ceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999988753

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.01  E-value=1.4e-09  Score=83.88  Aligned_cols=102  Identities=14%  Similarity=0.228  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHh--cCCCC----CCCCchhHHHHHHHHHH-HHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHH
Q 019191           49 GFHFAVTALVGLVSNA--TGLSA----SKHVPLWELLWFSIVAN-MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI  121 (345)
Q Consensus        49 ~~r~~~~~~~l~~~~~--~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l  121 (345)
                      ++|+..+.+.+..+..  .+.++    .++.++..+...+++.. .+..+.++|+++.+ +.+..+.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5678877776554322  22111    12233444555566654 78888999999999 58999999999999999999


Q ss_pred             HhccccChhhhhhhhhhhhcceeeeecccc
Q 019191          122 LHNKHYSKEVKMAVVVVVIGVGVCTITDVK  151 (345)
Q Consensus       122 ~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~  151 (345)
                      ++|||+++.++.+++++++|++++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999998877754

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.99  E-value=2.5e-09  Score=87.05  Aligned_cols=219  Identities=10%  Similarity=0.072  Sum_probs=147.8

Q ss_pred             HHHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc--cccc
Q 019191           77 ELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV--KVNA  154 (345)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--~~~~  154 (345)
                      +..|.+++-....+.+..+++.++++.++.+.+++-.|+.+++++.+++|+.-.++++.++++.|++++.+.|.  ..++
T Consensus        55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~  134 (290)
T KOG4314|consen   55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEI  134 (290)
T ss_pred             eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhh
Confidence            34455666666677777799999999999999999999999999999999999999999999999999987764  4578


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHH--HHhhhccCC-ccccccccCchhHHHHHH
Q 019191          155 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLG--PFVDYYLNG-KFITTYKMTSGAILFIFL  231 (345)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~  231 (345)
                      .|...+++++...|+|.+..|+.....+...  ...+.+..+..-+...+  ++.-.. ++ +..+++...+  |..++.
T Consensus       135 iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~-T~VE~~qsFA~~P--WG~l~G  209 (290)
T KOG4314|consen  135 IGIACAVGSAFMAALYKVLFKMFIGNANFGD--AAHFMSCLGFFNLCFISFPALILAF-TGVEHLQSFAAAP--WGCLCG  209 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHhhhHHHHHH-hchHHHHHHhhCC--chhhhh
Confidence            9999999999999999999998775433322  22222222222221111  000000 11 1112121111  123344


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      .+.++...|+.....+.-..|...++-.....+-......++-+-..+.....|..++++|..+.-...
T Consensus       210 ~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  210 AAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             HHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            444444555555555566666666655555555556666665555688899999999999999876543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.93  E-value=2e-07  Score=81.49  Aligned_cols=204  Identities=15%  Similarity=0.157  Sum_probs=145.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhcccchhHHHH-HhhhhHHHHHHHHHHHhccccChhhhh----hhhhhhhcceeeeeccccc
Q 019191           78 LLWFSIVANMSIAGMNFSLMLNSVGFYQI-SKLSMIPVVCVMEWILHNKHYSKEVKM----AVVVVVIGVGVCTITDVKV  152 (345)
Q Consensus        78 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~-l~~~~p~~~~~l~~l~~~e~~~~~~~~----~~~l~~~Gv~l~~~~~~~~  152 (345)
                      -+..|++...+...++.|++++++|.+-= -...+-+.+.+.++++++|--+..+++    ++++.++|+.+.+..|.+.
T Consensus        48 ~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~  127 (269)
T PF06800_consen   48 AFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS  127 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            34567778889999999999999887653 345677779999999999977666644    7889999999987765321


Q ss_pred             --------cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCch
Q 019191          153 --------NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSG  224 (345)
Q Consensus       153 --------~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~  224 (345)
                              ...|....+++++.|..|.+..|..    +.+++....=++.-..+..+++....    .......      
T Consensus       128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~k------  193 (269)
T PF06800_consen  128 DKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS----KKPFFEK------  193 (269)
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc----ccccccc------
Confidence                    2359999999999999999997652    46677766544322222112211111    0011111      


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccc----hhhHHHHhHHHHH
Q 019191          225 AILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKN----ISGMILAVVGMVI  295 (345)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~----iiG~~lii~G~~l  295 (345)
                      ..+.-+.++++....|+..+...++.+....-.++.+..+++.+.|.++++|+-+..+    ++|.++++.|..+
T Consensus       194 ~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  194 KSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             chHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            1124455666666777777788899999999999999999999999999999988664    4677878777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.79  E-value=1.6e-07  Score=85.09  Aligned_cols=141  Identities=14%  Similarity=0.149  Sum_probs=105.4

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHH
Q 019191          151 KVNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIF  230 (345)
Q Consensus       151 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (345)
                      +....|.++.+.++++|+...+..|.. .  +.+|.+...+...++.+.+++......+.   ........+...+....
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~   77 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQW---SYLKTLIQTPQKIFMLA   77 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccH---HHHHHHHcCHHHHHHHH
Confidence            344679999999999999999999764 3  57899999999888877665543222110   00000000112222333


Q ss_pred             HHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          231 LSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .+++.....+.+.++.+++.++..+++..+..|++..++++++++|+++..+++|.++.++|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            4555555667777889999999999999999999999999999999999999999999999998764

>TIGR00688 rarD rarD protein

Probab=98.76  E-value=1.9e-07  Score=82.77  Aligned_cols=139  Identities=13%  Similarity=0.115  Sum_probs=103.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccC-CccccccccCchhHHHHHHHH
Q 019191          155 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLN-GKFITTYKMTSGAILFIFLSC  233 (345)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  233 (345)
                      .|..+.++++++|+...+..|.. .  +.++.+..++-..++.+.+.+.......... .+....... ...+......+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQK-RPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCccc-chHHHHHHHHH
Confidence            48899999999999999999973 3  4899999999998887776554433211000 000100001 11223455555


Q ss_pred             HHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          234 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      ++....+.+.+..++++++..+++..+..|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            5556667777788999999999999999999999999999999999999999999999988653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.68  E-value=3.7e-07  Score=82.12  Aligned_cols=133  Identities=12%  Similarity=0.072  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHH
Q 019191          157 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  236 (345)
Q Consensus       157 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (345)
                      +.+.+.+++++|.+.+..|+..++  .++.  ..+....+.+.+.+......   ......  ..+...+.....+++..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~   73 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYL---AQVGWS--RLPATFWLLLAISAVAN   73 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhc---ccCCCC--CcchhhHHHHHHHHHHH
Confidence            578899999999999999976653  2232  34444444444444332210   000110  01112233555666667


Q ss_pred             HHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          237 VFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      ...+...++..++.++...+++.+..|+++.++++++++|+++..+++|..+++.|+.+...
T Consensus        74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            77777788899999999999999999999999999999999999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.59  E-value=2.3e-06  Score=75.93  Aligned_cols=118  Identities=15%  Similarity=0.076  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHHHHHHHH-HHHHHhhhhhhhcc
Q 019191           22 SSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASK--HVPLWELLWFSIV-ANMSIAGMNFSLML   98 (345)
Q Consensus        22 ~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~al~~   98 (345)
                      +.....+..|...++  .+.+ +.....+|+.++.+++.........+..  ..++..+...+++ ...+..+.++++++
T Consensus       139 ~~a~~~~~~k~~~~~--~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  215 (260)
T TIGR00950       139 SFALGTVLYKRLVKK--EGPE-LLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTL  215 (260)
T ss_pred             HHHHHHHHHhHHhhc--CCch-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            333445668887776  3333 4456667888887766654332211111  1122234445555 45678889999999


Q ss_pred             cchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcc
Q 019191           99 NSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGV  142 (345)
Q Consensus        99 ~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv  142 (345)
                      .+++.++++.++.|++++++++++++|+++..++.|.++.+.|+
T Consensus       216 ~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       216 VDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999986

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.50  E-value=5.3e-07  Score=81.33  Aligned_cols=216  Identities=12%  Similarity=0.167  Sum_probs=122.0

Q ss_pred             HHHHHHH-HHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeeccc-c---c
Q 019191           78 LLWFSIV-ANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDV-K---V  152 (345)
Q Consensus        78 ~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~---~  152 (345)
                      .++.|+. +.++..+...|+.+.|.+..+-+.+..-++.++++..++|||+++..+.|+++++.|..++....+ +   .
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~  131 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIH  131 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcC
Confidence            3444444 566778888899999999999999999999999999999999999999999999999987543221 1   0


Q ss_pred             cc---------hh---HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHH---HHHHhhhccCCcccc
Q 019191          153 NA---------KG---FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLV---LGPFVDYYLNGKFIT  217 (345)
Q Consensus       153 ~~---------~G---~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~---~~~~~~~~~~~~~~~  217 (345)
                      +.         .+   +...... +...+.....+|.-+   .+........+.+++...+.   ..........++.  
T Consensus       132 t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~---~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~--  205 (300)
T PF05653_consen  132 TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGR---RNILVYISICSLIGSFTVLSAKAISILIKLTFSGDN--  205 (300)
T ss_pred             CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhcc---cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCch--
Confidence            00         12   1111111 111111111111111   11110011111112211111   0111111111111  


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhH-HHHHHHHhhHhhcCCc--ccc----cchhhHHHHh
Q 019191          218 TYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHM-KTVCVLTLGWLLFDSA--LTF----KNISGMILAV  290 (345)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~pv~~~~~s~l~~~e~--~s~----~~iiG~~lii  290 (345)
                      .+ .++..|.+++....+........++++++.+++....+.+. -...+++-|.++++|.  .++    ....|..+++
T Consensus       206 ~f-~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii  284 (300)
T PF05653_consen  206 QF-TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII  284 (300)
T ss_pred             hh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence            11 12233444444455555555666778888887766555444 4556677788889975  555    3456778888


Q ss_pred             HHHHHhhhhh
Q 019191          291 VGMVIYSWAV  300 (345)
Q Consensus       291 ~G~~l~~~~~  300 (345)
                      .|+.+.+..+
T Consensus       285 ~GV~lL~~~~  294 (300)
T PF05653_consen  285 IGVFLLSSSK  294 (300)
T ss_pred             HhhheeeccC
Confidence            8998876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.49  E-value=4.1e-06  Score=77.62  Aligned_cols=139  Identities=14%  Similarity=0.147  Sum_probs=105.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  233 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (345)
                      ..-+...+..-++|+.+.++.|...+. +.++.....+-..++++.+++.....+...   ...  ..+...+..+...+
T Consensus        12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~--~~~~~~~~~l~l~g   85 (358)
T PLN00411         12 AVFLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLP--PLSVSILSKIGLLG   85 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccC--cchHHHHHHHHHHH
Confidence            355677788889999999999988754 789999999988888877776655443210   011  01122233444455


Q ss_pred             HHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhh------cCCcccccchhhHHHHhHHHHHhhh
Q 019191          234 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLL------FDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~------~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      ++++..+...+..++++++..+++..+..|+++.++++++      ++|+++..+++|.++.++|+.+...
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            5555555567788999999999999999999999999999      6999999999999999999987654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.37  E-value=1.1e-05  Score=63.33  Aligned_cols=120  Identities=15%  Similarity=0.156  Sum_probs=80.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHH
Q 019191          155 KGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  234 (345)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (345)
                      .|+++.+.+.++.+..+++.|+-.++.+..+....       .. .... ..              .++.  ..+..+.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-------~~-~~~~-~~--------------~~p~--~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-------FI-AALL-AF--------------GLAL--RAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-------HH-HHHH-HH--------------hccH--HHHHHHHH
Confidence            47889999999999999999987665432111110       00 0000 00              0010  02222333


Q ss_pred             HHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHh--hcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          235 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWL--LFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l--~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      +.....+....++++.+...+..+....++...+.++.  ++||++|+.+++|.+++++|+.+.+..
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            33334444556799999999999888888888888875  899999999999999999999997653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.35  E-value=5.6e-06  Score=63.25  Aligned_cols=63  Identities=13%  Similarity=-0.004  Sum_probs=57.8

Q ss_pred             HHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeee
Q 019191           84 VANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT  146 (345)
Q Consensus        84 ~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~  146 (345)
                      ++.....+...+++.+|.+.+..+.++.++++.+++++++|||+++.|+.|++++++|++++.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            356677788889999999999999999999999999999999999999999999999997754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.25  E-value=2.4e-05  Score=70.84  Aligned_cols=117  Identities=10%  Similarity=-0.033  Sum_probs=81.5

Q ss_pred             HHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhH---HHHHHHH-HHHHHhhhhhhhccc
Q 019191           24 VGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATGLSASKHVPLWE---LLWFSIV-ANMSIAGMNFSLMLN   99 (345)
Q Consensus        24 ~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~al~~~   99 (345)
                      ....+..|...++    .+ |..... ..+++.+.+......... ....++..   .+..+++ ...++.++++++++.
T Consensus       161 a~~~v~~r~~~~~----~~-~~~~~~-~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~  233 (293)
T PRK10532        161 AIYILSGQRAGAE----HG-PATVAI-GSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRL  233 (293)
T ss_pred             HHHHHHHHHHhcc----CC-chHHHH-HHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3344566766655    56 666544 444444444333222111 11122222   2445555 445777889999999


Q ss_pred             chhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeee
Q 019191          100 SVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI  147 (345)
Q Consensus       100 ~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~  147 (345)
                      +++.++++.++.|+++.++++++++|+++..+++|.+++++|++....
T Consensus       234 ~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        234 PTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             ChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999887643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.21  E-value=3.5e-05  Score=67.33  Aligned_cols=141  Identities=17%  Similarity=0.169  Sum_probs=105.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHH
Q 019191          153 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLS  232 (345)
Q Consensus       153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (345)
                      +..|+++++.|-+.|++-..+.|-+.   +.++.++..+-..++..+++........+   .......-++..+..+..+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~---~~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQW---RELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHhCcHHHHHHHHH
Confidence            45799999999999999999988753   47889999888888777666555443222   1111112233344455555


Q ss_pred             HHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          233 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      +..-..-.....|+.+.-....+++-.+++|++.+++|.++++|+++..|++..++..+|+..-.+.
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            5444444444457899999999999999999999999999999999999999999999999876543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.19  E-value=6.4e-05  Score=69.75  Aligned_cols=138  Identities=13%  Similarity=0.013  Sum_probs=99.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCC-HHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHH
Q 019191          153 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIG-SFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFL  231 (345)
Q Consensus       153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (345)
                      ++.-..+.++--.+...+++..|...+.  .+ |+.+..++..++.+...+.... . ....+..   ......+..++.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~~~~---~~~~~~~~~llp  119 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-G-FRKIPRI---KSLKLFLKNFLP  119 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCC---CCHHHHHHHHHH
Confidence            3444455555666667778888888775  56 8999988888877655444321 1 1000111   101123345666


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .++++...+...+..++++++..+.++....|++++++++++++|+++..+++|.++++.|+.+..
T Consensus       120 ~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        120 QGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            666666666666788999999999999999999999999999999999999999999999999865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.17  E-value=3.2e-05  Score=70.11  Aligned_cols=70  Identities=14%  Similarity=0.168  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeee
Q 019191           78 LLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI  147 (345)
Q Consensus        78 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~  147 (345)
                      +...++....++.+.++++++.+++.++...+..|++..++++++++|+++..+++|.++++.|+.+...
T Consensus       218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            3344555556788899999999999999999999999999999999999999999999999999877643

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.14  E-value=1.1e-05  Score=71.17  Aligned_cols=214  Identities=12%  Similarity=0.147  Sum_probs=122.3

Q ss_pred             HHHHHHHH-HHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecccccc--
Q 019191           77 ELLWFSIV-ANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITDVKVN--  153 (345)
Q Consensus        77 ~~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~--  153 (345)
                      ++++.|++ +.++-...+.|..|-|.+..+-+.+++.+..++++..++|||++..-.+|++++++|..++....++.+  
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            35566655 667888889999999999999999999999999999999999999999999999999988765433100  


Q ss_pred             -----------chhHH-HHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHH------HHHhhhccCCcc
Q 019191          154 -----------AKGFL-CACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVL------GPFVDYYLNGKF  215 (345)
Q Consensus       154 -----------~~G~~-~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~------~~~~~~~~~~~~  215 (345)
                                 -.+++ +..+-.+...+--...+   ++++  ....+.|....+.+..+-.      +........+..
T Consensus       145 ~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  145 ESVEEVWELATEPGFLVYVIIIILIVLILIFFYA---PRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             ccHHHHHHHhcCccHHHHHHHHHHHHHHHheeec---cccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence                       02221 11111111111111222   1111  2223333333333211100      001111111111


Q ss_pred             ccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhHH-hhHHHHHHHHhhHhhcCCc--cc----ccchhhHHH
Q 019191          216 ITTYKMTSGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSA--LT----FKNISGMIL  288 (345)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~pv~~~~~s~l~~~e~--~s----~~~iiG~~l  288 (345)
                      .  ..++ ..|..+.....+.........++++..++...+.+ ..+-..++++-|.++|+|-  .+    ...+.|...
T Consensus       220 q--l~~~-~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~t  296 (335)
T KOG2922|consen  220 Q--LFYP-LTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVT  296 (335)
T ss_pred             c--cccH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHH
Confidence            1  1121 23333333333333333334566776555544444 3445667788888889874  33    345678889


Q ss_pred             HhHHHHHhhh
Q 019191          289 AVVGMVIYSW  298 (345)
Q Consensus       289 ii~G~~l~~~  298 (345)
                      ++.|+++...
T Consensus       297 i~~G~flL~~  306 (335)
T KOG2922|consen  297 IFLGIFLLHR  306 (335)
T ss_pred             hhheeeEeee
Confidence            9999998753

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.09  E-value=0.00012  Score=66.55  Aligned_cols=125  Identities=9%  Similarity=0.082  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 019191          165 LSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQY  244 (345)
Q Consensus       165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
                      .+...++++.|...++. ..|..+..+....+.+...+... . ....     ..+.+...+..+...+++........+
T Consensus        12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~-~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~   83 (302)
T TIGR00817        12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-S-GLPK-----RLKISSALLKLLLPVAIVHTIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-h-CCCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455667788877642 45777777776655554433211 0 0000     011222234455555666666666777


Q ss_pred             HhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          245 LCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      ..++++++..+++.....|+++.++++++++|+++..++.|..+++.|+.+..
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            88999999999999999999999999999999999999999999999997643

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.06  E-value=0.00014  Score=65.98  Aligned_cols=125  Identities=14%  Similarity=0.098  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHH
Q 019191          157 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  236 (345)
Q Consensus       157 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (345)
                      .++.++++++|+...+..|...+  +.+|.....+-..++++.+++.   ...    +.   .++     ......++..
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~---~~~----~~---~~~-----~~~~~~g~~~   68 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFF---VAR----PK---VPL-----NLLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHH---hcC----CC---Cch-----HHHHHHHHHH
Confidence            35688999999999999998766  5789999988876665544332   111    00   011     1122223222


Q ss_pred             H-HHHHHHHHhhcc-cCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          237 V-FCNVSQYLCIGR-FSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       237 ~-~~~~~~~~~~~~-~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      . ......+...++ .++..+++..+..|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            2 222233445665 5778889999999999999999999999999999999999999887653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.06  E-value=3.8e-05  Score=59.02  Aligned_cols=62  Identities=15%  Similarity=0.405  Sum_probs=54.8

Q ss_pred             HHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          238 FCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      ..+...++..++.++ .......+.|+++.++|+++++|+++..+++|..++.+|+.+..+.+
T Consensus        47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            555566678888885 77799999999999999999999999999999999999999987654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.01  E-value=0.00025  Score=64.14  Aligned_cols=129  Identities=13%  Similarity=0.005  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH-HHH
Q 019191          158 LCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC-ALA  236 (345)
Q Consensus       158 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  236 (345)
                      ...+...+.|+...+..|...+  +.+|.+...+-..++++.+++.......     ...    +...+......+ +..
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~-----~~~----~~~~~~~~~~~g~~~~   79 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGH-----PLP----TLRQWLNAALIGLLLL   79 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCC-----CCC----cHHHHHHHHHHHHHHH
Confidence            4567778899999999997655  6899999999888887776655432111     110    111122222233 322


Q ss_pred             HHHHHHHHHhh-cccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          237 VFCNVSQYLCI-GRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       237 ~~~~~~~~~~~-~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      ...+...+... ++.++..+++..++.|+++.+++++ ++|+++..+++|..+.++|+.+...
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            33344445566 8899999999999999999999986 7999999999999999999988653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.99  E-value=0.00017  Score=58.42  Aligned_cols=120  Identities=12%  Similarity=0.085  Sum_probs=86.9

Q ss_pred             HHHHHHHhhcc---CCcccchhhHHHHHHHHHHHHHHHHHHh-cCCCC-------CCC--C--c---hhHHHHHHHHHHH
Q 019191           26 IIMANKQLMSS---SGYAFSFATTLTGFHFAVTALVGLVSNA-TGLSA-------SKH--V--P---LWELLWFSIVANM   87 (345)
Q Consensus        26 ~~~~~K~~l~~---~~~~~~~P~~l~~~r~~~~~~~l~~~~~-~~~~~-------~~~--~--~---~~~~~~~~~~~~~   87 (345)
                      -.+..|..+++   ++.+.+ |..+.......+.+++.+... .+..+       ..+  .  +   +..+...+++...
T Consensus        15 ~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (153)
T PF03151_consen   15 RNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFL   93 (153)
T ss_pred             HHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHH
Confidence            34556666665   134677 888887777777766655432 11111       000  0  1   1223344555666


Q ss_pred             HHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeee
Q 019191           88 SIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT  146 (345)
Q Consensus        88 ~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~  146 (345)
                      .+...+..++++++-+.+++.....+.+.++++++++|+++..++.|++++++|+.+-+
T Consensus        94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            77788889999999999999999999999999999999999999999999999987643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.94  E-value=0.0073  Score=55.30  Aligned_cols=219  Identities=10%  Similarity=0.037  Sum_probs=131.8

Q ss_pred             HHHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhcccc---C----hhhhhhhhhhhhcceeeee---
Q 019191           79 LWFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHY---S----KEVKMAVVVVVIGVGVCTI---  147 (345)
Q Consensus        79 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~---~----~~~~~~~~l~~~Gv~l~~~---  147 (345)
                      +..|++...+...+..+++|+.+|...-+ ..++-+...++..++++|=.   +    ..-.+|+++.++|+++...   
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            44566777788888899999999987744 45667778888888877522   2    2347788999999998766   


Q ss_pred             -ccc--------c-ccchhHHHHHHHHHHHHHHHHHHHHH------hhhcCCCHHHHHHhhhH---HHHHHHHH-HHHHh
Q 019191          148 -TDV--------K-VNAKGFLCACVAVLSTSLQQITIGSL------QKKYSIGSFELLSKTAP---IQAVSLLV-LGPFV  207 (345)
Q Consensus       148 -~~~--------~-~~~~G~~~~l~a~~~~a~~~v~~~~~------~~~~~~~~~~~~~~~~~---~~~v~l~~-~~~~~  207 (345)
                       .|.        + ....|++.++++.+.++.|+.....-      ..+.+.++.....-+..   .+.+.... .....
T Consensus       157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~  236 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIR  236 (345)
T ss_pred             hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             332        1 12469999999999999999433321      11124444433322222   22222111 11111


Q ss_pred             -hhccCCccccccccC----chhHHHHHHHHHHHHHHHHHHHHhhcccCchhHhH---Hh-hHHHHHHHHhhHhhcCCcc
Q 019191          208 -DYYLNGKFITTYKMT----SGAILFIFLSCALAVFCNVSQYLCIGRFSATSFQV---LG-HMKTVCVLTLGWLLFDSAL  278 (345)
Q Consensus       208 -~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~l~pv~~~~~s~l~~~e~~  278 (345)
                       ......+.......+    .......+++++.-+..++.....-++.+.....+   +. .+.-+++.+.|. +++|.-
T Consensus       237 ~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K  315 (345)
T PRK13499        237 LAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWK  315 (345)
T ss_pred             HhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhcc
Confidence             000000001111111    12333456666666666666666666664443333   33 666688899999 499987


Q ss_pred             c------ccchhhHHHHhHHHHHhhh
Q 019191          279 T------FKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       279 s------~~~iiG~~lii~G~~l~~~  298 (345)
                      +      ...++|.+++++|..+...
T Consensus       316 ~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        316 GASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHhh
Confidence            7      5668999999999887654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.78  E-value=0.00029  Score=63.61  Aligned_cols=131  Identities=15%  Similarity=0.108  Sum_probs=92.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHH
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  235 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (345)
                      |.+++++++++|+...+..|+..   +.++.+...  ..++.+.+.........    +..    .....+..-+.+++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~----~~~----~~~~~~~~g~l~G~~   68 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVL----PEF----WALSIFLVGLLSGAF   68 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhC----Ccc----cccHHHHHHHHHHHH
Confidence            57889999999999999998753   455555542  33344433333222211    010    112233334455555


Q ss_pred             HHHHHHHHHHhhcccCchhHhHHhh-HHHHHHHHhhHhhcCCcccccc----hhhHHHHhHHHHHhhhh
Q 019191          236 AVFCNVSQYLCIGRFSATSFQVLGH-MKTVCVLTLGWLLFDSALTFKN----ISGMILAVVGMVIYSWA  299 (345)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~pv~~~~~s~l~~~e~~s~~~----iiG~~lii~G~~l~~~~  299 (345)
                      -...+..++.++++.+...+-...+ +.++++.+++.++++|+.+..+    ++|.+++++|+.+....
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            5556788888999999999988888 8888999999999999999999    99999999999987554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.77  E-value=0.00054  Score=62.31  Aligned_cols=128  Identities=13%  Similarity=0.074  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHhhhcCCC--HHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHHHHHHHHH
Q 019191          166 STSLQQITIGSLQKKYSIG--SFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALAVFCNVSQ  243 (345)
Q Consensus       166 ~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
                      ++..+.+.+|++.++....  +..+++.+.....+...+......    .+..     +...+......+++.+......
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKS-----RKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCC-----CcChHHHHHHHHHHHHHHHHHH
Confidence            3344667888887655444  666666665444443333222111    0111     1111123334455556666677


Q ss_pred             HHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          244 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       244 ~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      +..+++++.....+....+|+.++++++++++++.+..++++..++.+|+.+....+.+
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            78899999999999999999999999999999999999999999999999998876543

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.77  E-value=0.0013  Score=52.19  Aligned_cols=131  Identities=18%  Similarity=0.212  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHHH
Q 019191          157 FLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCALA  236 (345)
Q Consensus       157 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (345)
                      .++++.+...-+.+.....++.++.+ ++......+...+.+.+.+...+.+.. ..+.....+|      ....++++|
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p~------w~~lGG~lG   74 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASLSSVPW------WAYLGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCCh------HHhccHHHH
Confidence            56788888999999999999877544 588888888878888777776665432 1111211122      333478888


Q ss_pred             HHHHHHHHHhhcccCchhHhHHhhHHHH-HHHHhhHh----hcCCcccccchhhHHHHhHHHHH
Q 019191          237 VFCNVSQYLCIGRFSATSFQVLGHMKTV-CVLTLGWL----LFDSALTFKNISGMILAVVGMVI  295 (345)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~pv-~~~~~s~l----~~~e~~s~~~iiG~~lii~G~~l  295 (345)
                      ...-......+++.++..+......--+ .+.+++.+    .-++++++.+++|.+++++|+.+
T Consensus        75 ~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   75 VFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            8877777788999999998887777544 45666664    23356999999999999999864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.74  E-value=0.00017  Score=55.53  Aligned_cols=72  Identities=11%  Similarity=0.107  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhhcccchhHHHHHh-hhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeec
Q 019191           77 ELLWFSIVANMSIAGMNFSLMLNSVGFYQISK-LSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT  148 (345)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~  148 (345)
                      ......+++..++.+...+++++|.+.+..+- ...-+.+.+.++++++|+++..++.++.++++|++.+...
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34556666888889999999999999998884 6899999999999999999999999999999999887543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.71  E-value=0.00022  Score=54.43  Aligned_cols=56  Identities=14%  Similarity=0.157  Sum_probs=50.5

Q ss_pred             HHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          242 SQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .....+++.+...+-..-.+.++.+.+.|++++||++|+.+++|.++++.|+.+..
T Consensus        53 ~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         53 LWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33457899999999998889999999999999999999999999999999998754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.63  E-value=0.0024  Score=57.16  Aligned_cols=140  Identities=16%  Similarity=0.098  Sum_probs=93.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  233 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (345)
                      ..+....+..++.|+......|+..+. ..+......+....+....   .+...... ....   +.....+...+..+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~   77 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLL---LPLLLLEP-RGLR---PALRPWLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHH---HHHHHhhc-cccc---ccccchHHHHHHHH
Confidence            457778888889999999888886653 2344444443443333331   11111110 0001   00111223455555


Q ss_pred             HHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhH-hhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          234 ALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGW-LLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~-l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      +.........+..++++++..+....+..|++..++++ ++++|+++..++.|..+...|+.+......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            55556666667789999999999999999999999997 777999999999999999999999776543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.62  E-value=0.00019  Score=56.31  Aligned_cols=72  Identities=11%  Similarity=0.079  Sum_probs=61.9

Q ss_pred             HHHHH-HHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHH--HhccccChhhhhhhhhhhhcceeeeecc
Q 019191           78 LLWFS-IVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWI--LHNKHYSKEVKMAVVVVVIGVGVCTITD  149 (345)
Q Consensus        78 ~~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l--~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  149 (345)
                      +...+ +++..+..+.+++++..+++.+.-+.+..+.++.+.++.  ++||+++..|+.|++++++|+.++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34444 457778899999999999999999999999888888885  7999999999999999999999876443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.60  E-value=0.0011  Score=60.47  Aligned_cols=74  Identities=23%  Similarity=0.289  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          228 FIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      ..+..+++=+..|+....+.++++.+.+.+......++++++|++++++++++.|++|..+++.|+.+......
T Consensus        81 ~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   81 KYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            33444677778899999999999999999999999999999999999999999999999999999998766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.50  E-value=0.00047  Score=52.37  Aligned_cols=69  Identities=13%  Similarity=0.115  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeec
Q 019191           80 WFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT  148 (345)
Q Consensus        80 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~  148 (345)
                      ..-+++..++.+...+++.+|.+.+..+ ....-+.+.+.++++++|++++.++.|+.+.++|++.+...
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3445567778888889999999999888 45788999999999999999999999999999999887543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.47  E-value=0.00069  Score=50.92  Aligned_cols=69  Identities=12%  Similarity=0.013  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhhhhhhhcccchhHHHHHhh-hhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeee
Q 019191           78 LLWFSIVANMSIAGMNFSLMLNSVGFYQISKL-SMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT  146 (345)
Q Consensus        78 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~  146 (345)
                      .....+++..++.+...+++.+|.+.+..+=. ...+.+.+.+++++||++++.|+.++.+.++|++.+.
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            34455667778888889999999999876655 7889999999999999999999999999999998764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.43  E-value=0.0013  Score=49.73  Aligned_cols=67  Identities=9%  Similarity=0.082  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHhhhhhhhcccchhHHHHHhh-hhHHHHHHHHHHHhccccChhhhhhhhhhhhcceee
Q 019191           79 LWFSIVANMSIAGMNFSLMLNSVGFYQISKL-SMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC  145 (345)
Q Consensus        79 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~  145 (345)
                      ....+++..++.+...+++++|.+.+..+=. ..-+.+.+.+++++||++++.|+.++.+.++|++.+
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3445556678888888999999999876654 778899999999999999999999999999999765

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.34  E-value=4.1e-05  Score=65.04  Aligned_cols=204  Identities=13%  Similarity=0.160  Sum_probs=136.6

Q ss_pred             HHHHHHHHHHhhhhhhhcccchhHHH-HHhhhhHHHHHHHHHHHhccccChhh----hhhhhhhhhcceeeeecccc---
Q 019191           80 WFSIVANMSIAGMNFSLMLNSVGFYQ-ISKLSMIPVVCVMEWILHNKHYSKEV----KMAVVVVVIGVGVCTITDVK---  151 (345)
Q Consensus        80 ~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~p~~~~~l~~l~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~---  151 (345)
                      ..|.+-.++...++-|++++++|.+. +-..+.-+-+-+++++.+||=.+..+    ..++++.++|+.+-+..|.+   
T Consensus        64 isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          64 ISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             HhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            34555556777888899999998876 33446677788899999999776666    45788899999998877641   


Q ss_pred             -----ccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhH
Q 019191          152 -----VNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAI  226 (345)
Q Consensus       152 -----~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (345)
                           .--.|....+.+.+.|..|.+..+..    +.+-+....-++    +.+.+.+...... ..+ .   ..+ ...
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqA----iGMv~~ali~~~~-~~~-~---~~~-K~t  209 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQA----IGMVIGALILGFF-KME-K---RFN-KYT  209 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHH----HHHHHHHHHHhhc-ccc-c---chH-HHH
Confidence                 11258888889999999999988753    233344333332    2222222222111 000 0   111 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccch----hhHHHHhHHHHHhh
Q 019191          227 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNI----SGMILAVVGMVIYS  297 (345)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~i----iG~~lii~G~~l~~  297 (345)
                      +.-...++.....|...+..-++.+-.+.=.++.+.-+.+.+-|.++++|+-|..++    +|.+++++|..+..
T Consensus       210 ~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         210 WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            244455666566777777777888877777778888899999999999999887764    57777777776644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.34  E-value=0.00083  Score=50.05  Aligned_cols=70  Identities=11%  Similarity=0.037  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeee
Q 019191           78 LLWFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTI  147 (345)
Q Consensus        78 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~  147 (345)
                      .....+++..++.+...+++++|.+.+..+ .....+.+++.++++++||.+..+++++.+.++|++.+..
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            344556677788889999999999987654 5577889999999999999999999999999999987643

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.19  E-value=0.0013  Score=57.75  Aligned_cols=76  Identities=21%  Similarity=0.322  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          227 LFIFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      +....-+++-...|...+..+++.+|....+....+.+++.++++++++++++..||++..+...|+.+.......
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4566677777778888999999999999999999999999999999999999999999999999999997765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.11  E-value=0.0021  Score=49.47  Aligned_cols=55  Identities=18%  Similarity=0.405  Sum_probs=44.4

Q ss_pred             HhhcccCchh-HhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          245 LCIGRFSATS-FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       245 ~~~~~~~~~~-~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      ..+++.+... .++..-+.-+.+.+.|+++|||++|+.+++|..++++|+...+..
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            4566665443 445566788888999999999999999999999999999987543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.07  E-value=0.0029  Score=46.60  Aligned_cols=57  Identities=9%  Similarity=-0.020  Sum_probs=34.9

Q ss_pred             HHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhh
Q 019191           82 SIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVV  138 (345)
Q Consensus        82 ~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~  138 (345)
                      ..+++.++.+...+++++|.+.+..+ .....+.+.+.+.+++||++|..|+.|+.+.
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34677788888999999999999655 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.89  E-value=0.01  Score=54.42  Aligned_cols=141  Identities=15%  Similarity=0.106  Sum_probs=90.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhh-hccCCccccccc-cCchhHHHHHH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVD-YYLNGKFITTYK-MTSGAILFIFL  231 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~  231 (345)
                      ..|+++.+++++|++...+-.|| .|+   -+++.. |- ..+. +.-+..|+.- ....+...+... .+...+....+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            47999999999999999998887 342   344444 33 2222 2222333211 111111122122 44555566667


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhH-hHHhhHHHHHHHHhhHhhcCCcc---c----ccchhhHHHHhHHHHHhhhhhh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSF-QVLGHMKTVCVLTLGWLLFDSAL---T----FKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~pv~~~~~s~l~~~e~~---s----~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      ++++-...+..++..+++.+-+.. .+..-++-+.+.+.+.+++||-.   +    ..-++|.+++++|+.+..+...
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            777777777878888888776554 44556788888999999998643   2    3467888999999999887543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.76  E-value=0.00039  Score=59.96  Aligned_cols=70  Identities=14%  Similarity=0.254  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          230 FLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      ++=|+.|+..-...|++..+.+-..+.+..+..|+++++++|.+++|+.|..+.+|..+.+.|+++..+.
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            3345566666666778899999999999999999999999999999999999999999999999997754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.76  E-value=0.0076  Score=45.78  Aligned_cols=55  Identities=18%  Similarity=0.393  Sum_probs=45.1

Q ss_pred             HhhcccCchh-HhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          245 LCIGRFSATS-FQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       245 ~~~~~~~~~~-~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      .++++.+... .++..-+.-+.+.+.|+++|+|++|+.+++|..+++.|+...+..
T Consensus        49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4567766543 455566788888999999999999999999999999999997643

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.76  E-value=0.061  Score=42.93  Aligned_cols=137  Identities=17%  Similarity=0.126  Sum_probs=87.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSC  233 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (345)
                      ....+.++.+..+...+.-...++.+..+ +|..........+.+.+.+...+.+.+.........+|      ....++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pw------W~~~GG   76 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPW------WAWIGG   76 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCch------HHHHcc
Confidence            45677888889999999999988877544 56666666666677777666666443322111111111      233344


Q ss_pred             HHHHHHHHHHHHhhcccCchhHhHHhhH-HHHHHHHhhHhhcC----CcccccchhhHHHHhHHHHHhh
Q 019191          234 ALAVFCNVSQYLCIGRFSATSFQVLGHM-KTVCVLTLGWLLFD----SALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~pv~~~~~s~l~~~----e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      ++|..+-........+.+++....+... +-+.+++++.+=+.    .+++...++|..+++.|+++..
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            6666655555566788777766554443 55556666654333    3599999999999999966543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.63  E-value=0.014  Score=43.51  Aligned_cols=55  Identities=18%  Similarity=0.373  Sum_probs=46.9

Q ss_pred             HhhcccCc-hhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          245 LCIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       245 ~~~~~~~~-~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      ..+|+.+- +..++..-+-.+.+.+.|+++|+|++++.+++|..+++.|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34677654 45688888899999999999999999999999999999999987643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.62  E-value=0.047  Score=48.18  Aligned_cols=66  Identities=11%  Similarity=0.036  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhh----hhhhhhhcce
Q 019191           78 LLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKM----AVVVVVIGVG  143 (345)
Q Consensus        78 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~----~~~l~~~Gv~  143 (345)
                      =...|++...++.+...|.+....+.+-.+.++.+++..+.+.+++||+-+++++.    |+++.++|.+
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            34678888999999999999999999999999999999999999999998888754    5555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.59  E-value=0.048  Score=47.08  Aligned_cols=57  Identities=7%  Similarity=-0.027  Sum_probs=51.4

Q ss_pred             HHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcce
Q 019191           87 MSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVG  143 (345)
Q Consensus        87 ~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~  143 (345)
                      ..+.+.-.++...+..++.++.+..|.+.++.++++++|++|..||.++...+.+.+
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            355666779999999999999999999999999999999999999999988877665

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.58  E-value=0.06  Score=40.75  Aligned_cols=53  Identities=25%  Similarity=0.538  Sum_probs=43.9

Q ss_pred             HhhcccCc-hhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          245 LCIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       245 ~~~~~~~~-~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .++|+.+. +..++..-+.-+.+.+.|+++|+|++|+.+++|..+++.|+...+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34666554 445677778888889999999999999999999999999998754

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.51  E-value=0.0064  Score=53.22  Aligned_cols=132  Identities=18%  Similarity=0.216  Sum_probs=80.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHH
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  235 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (345)
                      |++.+++|+++++...+=.|+.-   ..|++-.+.+.+....+    .+.+.... . . ..  .+    .....+++.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~----~g~~v~~~-~-~-~p--~f----~p~amlgG~l   64 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFL----VGLVVNLI-L-G-FP--PF----YPWAMLGGAL   64 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHH----HHHHHHHh-c-C-CC--cc----eeHHHhhhhh
Confidence            56788899999998888888643   23565555444322221    12221111 0 0 00  11    1134445555


Q ss_pred             HHHHHHHHHHhhcccCc-hhHhHHhhHHHHHHHHhhHh-hcCCc-----ccccchhhHHHHhHHHHHhhhhhhHH
Q 019191          236 AVFCNVSQYLCIGRFSA-TSFQVLGHMKTVCVLTLGWL-LFDSA-----LTFKNISGMILAVVGMVIYSWAVEAE  303 (345)
Q Consensus       236 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~pv~~~~~s~l-~~~e~-----~s~~~iiG~~lii~G~~l~~~~~~~~  303 (345)
                      ....|....-+++.++- .-..+.+..+-+.+...|.+ +|+++     -.+.+++|.+++++|..++..-|.++
T Consensus        65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            55666666666777663 44556667777788777765 56653     45788999999999999998765544

The region concerned is approximately 280 residues long.

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.41  E-value=0.029  Score=42.22  Aligned_cols=54  Identities=15%  Similarity=0.248  Sum_probs=45.9

Q ss_pred             HhhcccCc-hhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          245 LCIGRFSA-TSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       245 ~~~~~~~~-~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      .++|+.+. +..++..-+..+.+.+.|+++|+|++|+.+++|..+++.|+...+.
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            44666554 4567888889999999999999999999999999999999998653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.38  E-value=0.0071  Score=54.72  Aligned_cols=118  Identities=19%  Similarity=0.189  Sum_probs=79.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHH
Q 019191          153 NAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLS  232 (345)
Q Consensus       153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (345)
                      ...|..+++.++++.+...+++|+-.++.+..+..--  .                      ...++ +..+.|+.-...
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~----------------------~~~~~-l~~~~W~~G~~~   59 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S----------------------GGRSY-LRRPLWWIGLLL   59 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c----------------------hhhHH-HhhHHHHHHHHH
Confidence            3579999999999999999999986543221110000  0                      00000 001111222222


Q ss_pred             HHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          233 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      ...+...   .+.++...+.+..+.++.+.-++..+++..+++|+++..+++|..+++.|..+...
T Consensus        60 ~~~g~~~---~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   60 MVLGEIL---NFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HhcchHH---HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            2223333   33457778899999999999999999999999999999999999999999987654

>TIGR00803 nst UDP-galactose transporter

Probab=96.31  E-value=0.1  Score=44.96  Aligned_cols=66  Identities=6%  Similarity=-0.049  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhccee
Q 019191           79 LWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGV  144 (345)
Q Consensus        79 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l  144 (345)
                      ....+....+..+..+.++|.++....+...+.++++.+++.++++|+++..+|.|..+.+.|+.+
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344455666667788899999999999999999999999999999999999999999999999764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.19  E-value=0.15  Score=46.27  Aligned_cols=139  Identities=15%  Similarity=0.148  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh--hcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCc---ccccccc-CchhHHHHHHH
Q 019191          159 CACVAVLSTSLQQITIGSLQK--KYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGK---FITTYKM-TSGAILFIFLS  232 (345)
Q Consensus       159 ~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~  232 (345)
                      ..+...+-.+......|+..+  +.++.|....+.+=.+-.++.......-+......   ......+ ++.....+..-
T Consensus        19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vP   98 (345)
T KOG2234|consen   19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVP   98 (345)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHH
Confidence            334444445555555554332  22456666666555444444433332222110001   1111111 12133455556


Q ss_pred             HHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          233 CALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .++-...|...|....+.+|.+..+...++.+.+.+++.++++++++..||...++...|+.+..
T Consensus        99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            66666777788889999999999999999999999999999999999999999999999999876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.68  E-value=0.031  Score=42.40  Aligned_cols=69  Identities=12%  Similarity=0.196  Sum_probs=55.6

Q ss_pred             hHHHHHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceee
Q 019191           76 WELLWFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVC  145 (345)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~  145 (345)
                      +.+.|..+ +..+...+++.+...+.|.+.-+ .+++=++|++.++++.+|..++.++.|+++.++|+.++
T Consensus        43 ~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            33444433 44455668888999999998877 58899999999988888888999999999999999875

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.60  E-value=0.0075  Score=51.65  Aligned_cols=132  Identities=17%  Similarity=0.184  Sum_probs=82.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHHH
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCAL  235 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (345)
                      +++.+++=++.|+.......|.    +-+|.+.+.-+.. +++...+...+.    ..+     ..+...+..-+.+++.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~-GALifaiiv~~~----~~p-----~~T~~~~iv~~isG~~   68 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTL-GALIFAIIVFLF----VSP-----ELTLTIFIVGFISGAF   68 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccH-HHHHHHHHHhee----ecC-----ccchhhHHHHHHhhhH
Confidence            4567788888888777666542    3345554444433 333332222111    001     1223334455566666


Q ss_pred             HHHHHHHHHHhhcccCchhHhHHhh-HHHHHHHHhhHhhcCCcccccchh----hHHHHhHHHHHhhhhhh
Q 019191          236 AVFCNVSQYLCIGRFSATSFQVLGH-MKTVCVLTLGWLLFDSALTFKNIS----GMILAVVGMVIYSWAVE  301 (345)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~pv~~~~~s~l~~~e~~s~~~ii----G~~lii~G~~l~~~~~~  301 (345)
                      ..+.+..+++.++..+.+.+..+++ .+-+-+.+++++.|||-.++.+++    ..+++++|+.+.++.++
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            6666777788888888777766554 567778899999999998877653    45677888888776654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.35  E-value=0.72  Score=36.60  Aligned_cols=113  Identities=13%  Similarity=0.154  Sum_probs=77.2

Q ss_pred             HHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhc-CCCC---CCCCchhHHHHHHHHHHHHHhhhhhhhcccchh
Q 019191           27 IMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNAT-GLSA---SKHVPLWELLWFSIVANMSIAGMNFSLMLNSVG  102 (345)
Q Consensus        27 ~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s  102 (345)
                      ...|-.+-+.  .+ + |...+...+..+.+.+.++... +..+   .++.+|+.+ .-|++......+..++...++++
T Consensus        17 ~~~N~~L~~~--~g-s-~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~-lGG~lG~~~V~~~~~~vp~lG~~   91 (138)
T PF04657_consen   17 AAFNGQLGKA--LG-S-PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAY-LGGLLGVFFVLSNIILVPRLGAA   91 (138)
T ss_pred             HHHHHHHHHH--hC-c-cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHh-ccHHHHHHHHHHHHHHhhhhhHH
Confidence            3445544444  22 4 8999999999888776654332 1111   233344433 37788888888888999999988


Q ss_pred             HHHHHhhh-hHHHHHHHHHH----HhccccChhhhhhhhhhhhccee
Q 019191          103 FYQISKLS-MIPVVCVMEWI----LHNKHYSKEVKMAVVVVVIGVGV  144 (345)
Q Consensus       103 ~~~~l~~~-~p~~~~~l~~l----~~~e~~~~~~~~~~~l~~~Gv~l  144 (345)
                      ....+.-+ +-+...+++.+    .-|+|+++.|..|+++.++|+.+
T Consensus        92 ~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   92 LTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            88766554 45566666664    34678999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.96  E-value=0.087  Score=38.73  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=25.2

Q ss_pred             HhhcccCchhH-hHHhhHHHHHHHHhhHhhcCCcccccchhhHHHH
Q 019191          245 LCIGRFSATSF-QVLGHMKTVCVLTLGWLLFDSALTFKNISGMILA  289 (345)
Q Consensus       245 ~~~~~~~~~~~-~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~li  289 (345)
                      .++++.+...+ .+..-+..+...+.|.+++||++|+.+++|..+|
T Consensus        48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            56788776655 6667788999999999999999999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.78  E-value=0.49  Score=42.10  Aligned_cols=114  Identities=12%  Similarity=0.076  Sum_probs=82.0

Q ss_pred             HHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHh--cCCCC------CCCCchhHHHHHHHHHHHHHhhhhhhhccc
Q 019191           28 MANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNA--TGLSA------SKHVPLWELLWFSIVANMSIAGMNFSLMLN   99 (345)
Q Consensus        28 ~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~al~~~   99 (345)
                      ...+-+++.  ++.+ +..+.+.--+...+.-.....  ....+      ..+.-++.++.++.+.+++..+-++-++.-
T Consensus       189 ~tQd~lf~~--~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~F  265 (327)
T KOG1581|consen  189 ATQDSLFKK--YKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERF  265 (327)
T ss_pred             hHHHHHhcc--CCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhc
Confidence            444555555  7777 665555444444443332211  11111      112235678999999999999988888888


Q ss_pred             chhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhccee
Q 019191          100 SVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGV  144 (345)
Q Consensus       100 ~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l  144 (345)
                      ++-..+++..+-=+++..++.++++++.++.||.|+.+.+.|...
T Consensus       266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            888889999999999999999999999999999999988887754

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.59  E-value=0.034  Score=47.37  Aligned_cols=70  Identities=13%  Similarity=0.088  Sum_probs=63.6

Q ss_pred             hhHHHHHHHHHHHHHhhhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhccee
Q 019191           75 LWELLWFSIVANMSIAGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGV  144 (345)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l  144 (345)
                      +.++..+++..+++..+-+.-..+.+|-+.+++..+--+||.+.++++++.+++.+||+|.++.+.|...
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            4567778888999999888888889999999999999999999999999999999999999999998865

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.53  E-value=0.074  Score=48.20  Aligned_cols=122  Identities=16%  Similarity=0.157  Sum_probs=88.8

Q ss_pred             HHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHH-HHHhc--CCC----C--CCCCchhHHHHHHHHHHHHHhhhhh
Q 019191           24 VGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGL-VSNAT--GLS----A--SKHVPLWELLWFSIVANMSIAGMNF   94 (345)
Q Consensus        24 ~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~-~~~~~--~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~   94 (345)
                      ..-.+..|.+++.++.+.+ ++.+....--++++.+. .....  +..    .  ....+...+...+++....+...+.
T Consensus       176 al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~  254 (316)
T KOG1441|consen  176 ALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFL  254 (316)
T ss_pred             HHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            3445667778865568899 99888888888777666 33221  111    0  1111122234445666666777888


Q ss_pred             hhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeee
Q 019191           95 SLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCT  146 (345)
Q Consensus        95 al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~  146 (345)
                      .+..+++-+.++....--.++.+.++++++++.+..+..|.+++++|+.+-+
T Consensus       255 ~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  255 VIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            9999999999999999888899999999999999999999999999998754

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.85  E-value=0.057  Score=49.20  Aligned_cols=73  Identities=15%  Similarity=0.266  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          229 IFLSCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      .+.-|...+..++....++++++....+++....-.++..+|..+.+|++|+...++..+.+.|+++.+..+-
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            3444555667777777889999999999999999999999999999999999999999999999999876544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.65  E-value=5  Score=36.17  Aligned_cols=135  Identities=15%  Similarity=0.105  Sum_probs=86.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHH-HHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHHHHH
Q 019191          156 GFLCACVAVLSTSLQQITIGSLQKKYSIGSFE-LLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFLSCA  234 (345)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (345)
                      ....++.-+++..+..+..|.....++.+... +..++++.+.+.+...-..  +..   ...+..+.  ......-..+
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~--~lv---~~~~l~~~--~~kk~~P~~~   85 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL--GLV---NFRPLDLR--TAKKWFPVSL   85 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh--cee---ecCCcChH--HHHHHccHHH
Confidence            45555666667777777888777777665433 3347776666655544322  100   11111121  1111111122


Q ss_pred             HHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhh
Q 019191          235 LAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYS  297 (345)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~  297 (345)
                      .-++.-+..-..+++.+-....++..+.|+.+.+...++++.+++...+.....+++|...+.
T Consensus        86 lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   86 LFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             HHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            222232333356899999999999999999999999999999999999999999999888754

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.36  E-value=0.36  Score=36.70  Aligned_cols=53  Identities=21%  Similarity=0.380  Sum_probs=43.1

Q ss_pred             HHHhhcccCchhHhHH-hhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHH
Q 019191          243 QYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVI  295 (345)
Q Consensus       243 ~~~~~~~~~~~~~~~~-~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l  295 (345)
                      .+..+++.+-+.+..+ +.+.-+++.+.++++.+|..+...++|.++++.|+.+
T Consensus        58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3445777777777666 4788889999999888888899999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.54  E-value=0.13  Score=42.74  Aligned_cols=64  Identities=20%  Similarity=0.235  Sum_probs=57.4

Q ss_pred             HHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhh
Q 019191          238 FCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVE  301 (345)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~  301 (345)
                      ..|+.+..++++++|+.++....-+..+..+++++++++++....++..++.+.|++...+...
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            4566677789999999999999999999999999999999999999999999999998876554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.38  E-value=0.057  Score=48.25  Aligned_cols=124  Identities=18%  Similarity=0.116  Sum_probs=84.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhccCCccccccccCchhHHHHHH
Q 019191          152 VNAKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYLNGKFITTYKMTSGAILFIFL  231 (345)
Q Consensus       152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (345)
                      .+..|..+++.+.+..+...++.||-.++...   .-+                   +  .++.-.++- ..+.|+.-+.
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~~-------------------r--a~~gg~~yl-~~~~Ww~G~l   72 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SGL-------------------R--AGEGGYGYL-KEPLWWAGML   72 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhh---hcc-------------------c--ccCCCcchh-hhHHHHHHHH
Confidence            35678888998888888888888876554211   000                   0  000000000 1234445444


Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhhhHH
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAVEAE  303 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~~~~  303 (345)
                      .-..|=..|++.   ....+++-.+.++.+.-+...+++..+++|++++...+|++++++|.........++
T Consensus        73 tm~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   73 TMIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            555555555554   445788888999999999999999999999999999999999999998876554433

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=89.35  E-value=2.4  Score=36.12  Aligned_cols=119  Identities=7%  Similarity=0.014  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhcC-CCCCC----CCc---hhHHHHHHHHHHHHHh
Q 019191           19 NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNATG-LSASK----HVP---LWELLWFSIVANMSIA   90 (345)
Q Consensus        19 ~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~~-~~~~~----~~~---~~~~~~~~~~~~~~~~   90 (345)
                      |...+...++..|...+-  -++. -+--.++.-+++..++..+...- ...+.    ..+   ...++..|++.....+
T Consensus       163 NclssaafVL~mrkri~l--tNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         163 NCLSSAAFVLIMRKRIKL--TNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hhHhHHHHHHHHHHhhcc--cccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence            444444445555554433  2354 55566666777666655543321 11111    111   2245666777777777


Q ss_pred             hhhhhhcccchhHHHHHhhhhHHHHHHHHHHHhccccChhhhhhhhhhhh
Q 019191           91 GMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVI  140 (345)
Q Consensus        91 ~~~~al~~~~~s~~~~l~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~  140 (345)
                      +.-+++.-++..+++++.+++-...++-+.+++.|+.++.++.++.+++.
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence            88889999999999999999988888888888999888888777766544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.03  E-value=10  Score=30.45  Aligned_cols=122  Identities=8%  Similarity=0.033  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHHHHHHHHHHHhc--CCCCC---CCCchhHHHHHHHHHHHHHhhhh
Q 019191           19 NVISSVGIIMANKQLMSSSGYAFSFATTLTGFHFAVTALVGLVSNAT--GLSAS---KHVPLWELLWFSIVANMSIAGMN   93 (345)
Q Consensus        19 ~~~~s~~~~~~~K~~l~~~~~~~~~P~~l~~~r~~~~~~~l~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   93 (345)
                      ++.+.....-.|-.+-+.    .+.|+......+..+.+++..+...  +....   .+.+|+.+ ..|++.........
T Consensus        13 aG~~l~~Q~~iN~qL~~~----~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~-~GG~lGa~~vt~s~   87 (150)
T COG3238          13 AGALLPLQAAINGRLARY----LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAW-IGGLLGAIFVTSSI   87 (150)
T ss_pred             HhhhhhhHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHH-HccchhhhhhhhhH
Confidence            344444444555555554    3349999999999887766654332  22211   22344433 33455544444455


Q ss_pred             hhhcccchhHHH-HHhhhhHHHHHHHHHHHh----ccccChhhhhhhhhhhhcceee
Q 019191           94 FSLMLNSVGFYQ-ISKLSMIPVVCVMEWILH----NKHYSKEVKMAVVVVVIGVGVC  145 (345)
Q Consensus        94 ~al~~~~~s~~~-~l~~~~p~~~~~l~~l~~----~e~~~~~~~~~~~l~~~Gv~l~  145 (345)
                      .....+.++... ++.+.+-+..++++.+=.    +++++..++.|+++.++|+.+.
T Consensus        88 ~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          88 LLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            555555555544 444455566666665432    3678999999999999995544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=87.78  E-value=13  Score=34.14  Aligned_cols=141  Identities=9%  Similarity=0.104  Sum_probs=71.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHhhhHHHHHHHHHHHHHhhhcc-CCcccccc-ccCchhHHH-HH
Q 019191          154 AKGFLCACVAVLSTSLQQITIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFVDYYL-NGKFITTY-KMTSGAILF-IF  230 (345)
Q Consensus       154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-~~  230 (345)
                      ..|+++..+++++.+.+.+-.||. |  +.+....-..+..++    -+..|...... ..+..+-. ..+...+.. .+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-k--~WsWEs~Wlv~gi~s----wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l   78 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-K--GWSWESYWLVQGIFS----WLIVPWLWALLAIPDFFSIYSATPASTLFWTFL   78 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-C--CccHHHHHHHHHHHH----HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence            469999999999999999888864 3  233322222232222    22233221111 11111111 122222333 33


Q ss_pred             HHHHHHHHHHHHHHHhhcccC-chhHhHHhhHHHHHHHHhhHhhcC-------CcccccchhhHHHHhHHHHHhhhhhhH
Q 019191          231 LSCALAVFCNVSQYLCIGRFS-ATSFQVLGHMKTVCVLTLGWLLFD-------SALTFKNISGMILAVVGMVIYSWAVEA  302 (345)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~pv~~~~~s~l~~~-------e~~s~~~iiG~~lii~G~~l~~~~~~~  302 (345)
                      .+.+-|.. ....-..+++.+ +...++..-+..+++.++..++.+       ++-....++|.+++++|+.+..+....
T Consensus        79 ~G~lWGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   79 FGVLWGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHHHhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence            33333322 121223455544 334455555555666555444433       223457889999999999998876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK02237 hypothetical protein; Provisional

Probab=83.60  E-value=6.8  Score=29.31  Aligned_cols=48  Identities=17%  Similarity=0.260  Sum_probs=41.3

Q ss_pred             chhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          252 ATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       252 ~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      .-..+.++-+-.+.++++++.+-+++++...++|..++++|+.+..+.
T Consensus        59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            345667777888889999999999999999999999999999876554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=82.81  E-value=12  Score=33.23  Aligned_cols=67  Identities=19%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHhhcccCchhHhHHhhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhh
Q 019191          232 SCALAVFCNVSQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSW  298 (345)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~  298 (345)
                      -++|-.+.....|..+..++++...+..-.-.+++-+++..+++.+++..||+|+..+..|+.....
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            3334334444455557778899998888888999999999999999999999999999999887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.7
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.38
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.32
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.13

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.70  E-value=2.7e-08  Score=77.66  Aligned_cols=66  Identities=17%  Similarity=0.197  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHhhcccCchhHhHH-hhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhhh
Q 019191          235 LAVFCNVSQYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWAV  300 (345)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~~  300 (345)
                      +....+++..+++++.++..+..+ ..+.|++++++|+++++|++|+.+++|.+++++|+++.+..+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            333444555678999999999888 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.38  E-value=8.5e-07  Score=66.67  Aligned_cols=70  Identities=11%  Similarity=0.114  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeecc
Q 019191           80 WFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTITD  149 (345)
Q Consensus        80 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  149 (345)
                      ...+++..++.+...++++.|.+.+..+ .+..|+++.+++++++||++++.|+.|++++++|+.+....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344577788888999999999999988 899999999999999999999999999999999998876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.32  E-value=4.8e-07  Score=70.52  Aligned_cols=69  Identities=12%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHhhhhhhhcccchhHHHHH-hhhhHHHHHHHHHHHhccccChhhhhhhhhhhhcceeeeec
Q 019191           80 WFSIVANMSIAGMNFSLMLNSVGFYQIS-KLSMIPVVCVMEWILHNKHYSKEVKMAVVVVVIGVGVCTIT  148 (345)
Q Consensus        80 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~~l~~l~~~e~~~~~~~~~~~l~~~Gv~l~~~~  148 (345)
                      ...+++.+++.+.+.++++++++.+..+ .++.|++++++++++++|++++.+++|++++++|+.++...
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3345577788899999999999999888 89999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.13  E-value=7.7e-06  Score=61.40  Aligned_cols=61  Identities=18%  Similarity=0.251  Sum_probs=53.4

Q ss_pred             HHHHHHHhhcccCchhHhHH-hhHHHHHHHHhhHhhcCCcccccchhhHHHHhHHHHHhhhh
Q 019191          239 CNVSQYLCIGRFSATSFQVL-GHMKTVCVLTLGWLLFDSALTFKNISGMILAVVGMVIYSWA  299 (345)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~-~~l~pv~~~~~s~l~~~e~~s~~~iiG~~lii~G~~l~~~~  299 (345)
                      .++....++++.+...+..+ ..+.|+.+.+.|++++||++|+.+++|..+++.|+.+.+..
T Consensus        43 ~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33444567999999999777 89999999999999999999999999999999999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00