Citrus Sinensis ID: 019268

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccEEHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHcHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
magrydsnpfdeeevnpfsdpavrgkssgqsrfggggffttnsasvppatnsrlsplphepagfnferdapidipldTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLeeknwppffpiihhdianeiPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLyrafsfkrdcsdrVIADQLALNLVSFLVFLshykpscrtesamKFGWFFLFYLLHIGFcifasvappiifkgksltgvlpavdvmgdhaLVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Flexible Loop (DISEMBL)
magrydsnpfdeeevnpfsdpaVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPLDTAADLKKKEKELQAKeaelrrreqdvrrKEEAAAragivleeknwPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Low Complexity Region (SEG)
MAGRYDSNPFDEEEVNPFSDPAVRgkssgqsrfggggffTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPldtaadlkkkekelqakeaelRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Disordered region (IsUnstruct)
****************************************************************************************************************AGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRG********************
Disordered Region (DISOPRED)
**GRYDSNPFDEEEVNPFSDP***********************************************************************************************LEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGS*****M***AARGAMRAAL
Disordered Region (DISEMBL)
**************VNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPLDTAADLKKKEKELQAKE*****************ARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGS*******************
Disordered Region (DISPRO)
*************E*******************************************************APIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAE**************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPLDTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
A2YMP7	306	Putative secretory carrie	N/A	no	0.886	0.993	0.647	1e-129
Q8H5X5	306	Secretory carrier-associa	yes	no	0.886	0.993	0.647	1e-129
Q9M5P2	289	Secretory carrier-associa	yes	no	0.833	0.989	0.656	1e-126
Q9SXA5	291	Secretory carrier-associa	no	no	0.839	0.989	0.647	1e-123
Q7F613	286	Secretory carrier-associa	no	no	0.833	1.0	0.650	1e-118
Q75IC7	313	Secretory carrier-associa	no	no	0.860	0.942	0.617	1e-117
Q9ZTX0	289	Secretory carrier-associa	N/A	no	0.810	0.961	0.651	1e-113
Q9SKT3	282	Secretory carrier-associa	no	no	0.819	0.996	0.633	1e-111
Q60EA5	282	Secretory carrier-associa	no	no	0.822	1.0	0.615	1e-109
Q9LR68	283	Secretory carrier-associa	no	no	0.822	0.996	0.571	1e-103

>sp|A2YMP7|SCAM1_ORYSI Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/343 (64%), Positives = 270/343 (78%), Gaps = 39/343 (11%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPP-ATNSRLSPLPH 59
           MAGRYDSNPF+E++VNPFS+ A RGK+ GQ  +GGG F+  N  +VP  ++NSRLSPLP 
Sbjct: 1   MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSMSSNSRLSPLPP 59

Query: 60  EPAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEE 119
           EPA F     A +DIPLD++ DLK +EKELQA+EAEL +RE++++R+EEAAARAGIV+EE
Sbjct: 60  EPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEE 115

Query: 120 KNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIW 179
           KNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL  CL WN++AVT+AW+KGEGVKIW
Sbjct: 116 KNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIW 175

Query: 180 FLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCR 239
            LAIIYFI+GVPGAYVLWYRPLY A                                  R
Sbjct: 176 LLAIIYFISGVPGAYVLWYRPLYNAM---------------------------------R 202

Query: 240 TESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIG 299
           T+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++  +ALVGIFYF+G
Sbjct: 203 TDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVG 262

Query: 300 FGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 342
           FGLFC+ESL+SIWVIQQVYMYFRGSGKAAEMKR+A RGAMRAA
Sbjct: 263 FGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAA 305

Probably involved in membrane trafficking.
Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H5X5|SCAM1_ORYSJ Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/343 (64%), Positives = 270/343 (78%), Gaps = 39/343 (11%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPP-ATNSRLSPLPH 59
           MAGRYDSNPF+E++VNPFS+ A RGK+ GQ  +GGG F+  N  +VP  ++NSRLSPLP 
Sbjct: 1   MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPP 59

Query: 60  EPAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEE 119
           EPA F     A +DIPLD++ DLK +EKELQA+EAEL +RE++++R+EEAAARAGIV+EE
Sbjct: 60  EPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEE 115

Query: 120 KNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIW 179
           KNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL  CL WN++AVT+AW+KGEGVKIW
Sbjct: 116 KNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIW 175

Query: 180 FLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCR 239
            LAIIYFI+GVPGAYVLWYRPLY A                                  R
Sbjct: 176 LLAIIYFISGVPGAYVLWYRPLYNAM---------------------------------R 202

Query: 240 TESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIG 299
           T+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++  +ALVGIFYF+G
Sbjct: 203 TDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVG 262

Query: 300 FGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 342
           FGLFC+ESL+SIWVIQQVYMYFRGSGKAAEMKR+A RGAMRAA
Sbjct: 263 FGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAA 305

Probably involved in membrane trafficking.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M5P2|SCAM3_ARATH Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1

 Score =  452 bits (1162), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/346 (65%), Positives = 259/346 (74%), Gaps = 60/346 (17%)

Query: 1   MAGRYDSNPF-DEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPH 59
           MA RYD NPF +EEEVNPF+                      N+  VPPA+NSRLSPLP 
Sbjct: 1   MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPP 38

Query: 60  EPAGFNFERDAPIDIPLDTAA--DLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVL 117
           EP GF++ R   +DIPLD A   DLKKKEKELQAKEAEL+RREQD++RKE+AAARAGIV+
Sbjct: 39  EPVGFDYGRT--VDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVI 96

Query: 118 EEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVK 177
           E KNWPPFFP+IHHDIANEIP+HLQRLQYV FATYLGL LCL WNI+AVTTAWIKGEGV 
Sbjct: 97  EVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVT 156

Query: 178 IWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPS 237
           IW LA+IYFIAGVPG YVLWYRPLYRAF                                
Sbjct: 157 IWLLALIYFIAGVPGGYVLWYRPLYRAF-------------------------------- 184

Query: 238 CRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYF 297
            RT+SA+ FGWFFLFY+LHI FC+FA+VAPP++FKGKSL G+LPA+DV+   A+VGIFYF
Sbjct: 185 -RTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIVGIFYF 243

Query: 298 IGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           IGF  FCLES+VSIWVIQQVYMYFRGSGK  +M+REAARGA+RAA+
Sbjct: 244 IGFAFFCLESVVSIWVIQQVYMYFRGSGKQDQMRREAARGALRAAV 289

Probably involved in membrane trafficking.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SXA5|SCAM5_ARATH Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2

 Score =  441 bits (1135), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/346 (64%), Positives = 256/346 (73%), Gaps = 58/346 (16%)

Query: 1   MAGRYDSNPFDEE-EVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPH 59
           M GRYD N FDE+ EVNPF++P                       SVP A+NSRLSPLP 
Sbjct: 1   MGGRYDRNTFDEQDEVNPFANPG----------------------SVPAASNSRLSPLPP 38

Query: 60  EPAGFNFER--DAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVL 117
           EPAGF + R  D P+D P   A DLKKKEKELQAKEA+LRRREQD++RK++AAARAGIV+
Sbjct: 39  EPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVI 98

Query: 118 EEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVK 177
           E KNWP FFP+IHHDIANEI + LQRLQY+AFATYLGL L L WNI+AVTTAWIKGEGV 
Sbjct: 99  EAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVT 158

Query: 178 IWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPS 237
           IW LA+IYFI+GVPG YVLWYRPLYRAF                                
Sbjct: 159 IWLLAVIYFISGVPGGYVLWYRPLYRAF-------------------------------- 186

Query: 238 CRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYF 297
            R++SA  FGWFFLFY+LHI FC+FA+VAPPI+FKGKSL G+LPA+DV+   ALVGIFYF
Sbjct: 187 -RSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQALVGIFYF 245

Query: 298 IGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           IGFGLFCLES+VSIWVIQQVYMYFRGSGKA +M+R+AARGAMRAA+
Sbjct: 246 IGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRDAARGAMRAAI 291

Probably involved in membrane trafficking.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F613|SCAM2_ORYSJ Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1

 Score =  426 bits (1095), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/343 (65%), Positives = 259/343 (75%), Gaps = 57/343 (16%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYD NPFDE++VNPF+                GG       SVPPA+NSR+ PLPHE
Sbjct: 1   MAGRYDRNPFDEDDVNPFA----------------GG-------SVPPASNSRMPPLPHE 37

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           P GF  +R A +DIPLD+  D+KKKEKELQAKEAEL +RE ++RR+EEAA+RAGIV+EEK
Sbjct: 38  P-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEK 96

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDI+NEIPIHLQR+QY+AF++ LGL  CL WNI+A T AWIKG GV IW 
Sbjct: 97  NWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWL 156

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFI+GVPGAYVLWYRPLY A                                  RT
Sbjct: 157 LAIIYFISGVPGAYVLWYRPLYNAM---------------------------------RT 183

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFFLFYL+HI FCI+++VAPP  FKGKSL G+LPA+DV+G++A+VGIFYFIGF
Sbjct: 184 ESALKFGWFFLFYLIHILFCIWSAVAPPFPFKGKSLAGILPAIDVIGNNAIVGIFYFIGF 243

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFCLESL+S+ VIQQVYMYFRGSGKAAEMKREAARGAMR+A 
Sbjct: 244 GLFCLESLLSVVVIQQVYMYFRGSGKAAEMKREAARGAMRSAF 286

Probably involved in membrane trafficking.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q75IC7|SCAM4_ORYSJ Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1

 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/337 (61%), Positives = 253/337 (75%), Gaps = 42/337 (12%)

Query: 1   MAGR--YDSNPFDE---EEVNPFSDPAVRGKSSGQSRFGGGGFFTTNS-ASVPPATNSRL 54
           MAGR  YD NPF+E   +EVNPF+D A +G S+GQS + GG F+TT S  S PPAT+  L
Sbjct: 1   MAGRSRYD-NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATH--L 57

Query: 55  SPLPHEPAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAG 114
           SPLP EPA F  +   P+DIP+DT+ D+K +EKEL AKEAEL RRE++++R+EEAAARAG
Sbjct: 58  SPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAG 117

Query: 115 IVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGE 174
           IVLE+KNWPPFFPIIH+DI NEIP+HLQR QYVAFA+ LGL LCL WNI+ VT AWIKGE
Sbjct: 118 IVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGE 177

Query: 175 GVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHY 234
           G KIWFLA+IYFI G PGAY LWYRPLYRA                              
Sbjct: 178 GPKIWFLAVIYFILGCPGAYYLWYRPLYRAM----------------------------- 208

Query: 235 KPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGI 294
               R ESA+KFGWFFLFYL+HI FC++A+V+P I+F GKSLTG+ PA+ ++G+  +VG+
Sbjct: 209 ----RNESALKFGWFFLFYLVHIAFCVYAAVSPSILFVGKSLTGIFPAISLIGNTVIVGV 264

Query: 295 FYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMK 331
           FYF+GF +FCLESL+S+WVIQ+VY+YFRGSGK AEMK
Sbjct: 265 FYFLGFAMFCLESLLSMWVIQRVYLYFRGSGKEAEMK 301

Probably involved in membrane trafficking.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ZTX0|SCAM_PEA Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1

 Score =  407 bits (1047), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/333 (65%), Positives = 246/333 (73%), Gaps = 55/333 (16%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYD NPFDEE+VNPFS+P                       S   ATNSR +PL  +
Sbjct: 1   MAGRYDPNPFDEEQVNPFSNPR----------------------SAASATNSRPAPLNPD 38

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
            A +N+     +DIPLDT+ D KKKE++LQAKEAELR+REQ+VRRKEEA ARAGIV+EEK
Sbjct: 39  RADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEK 98

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDI NEIPIHL+ LQYVAF + LGL LCL WN+V+VT AWIKGEGVKIWF
Sbjct: 99  NWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWF 158

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAGVPGAY LWYRPLYRAF                                 RT
Sbjct: 159 LAIIYFIAGVPGAYALWYRPLYRAF---------------------------------RT 185

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           +SA+KFGWFF+FYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GD+ LVGIFYFIGF
Sbjct: 186 DSAIKFGWFFMFYLLHIGFCILAAVAPPIVFKGKSLTGILSAIDVVGDYTLVGIFYFIGF 245

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKRE 333
           G FCLE+L+SIWVIQQVYM+FRG GK AEMKRE
Sbjct: 246 GFFCLETLISIWVIQQVYMHFRGGGKTAEMKRE 278

Probably involved in membrane trafficking.

Pisum sativum (taxid: 3888)

>sp|Q9SKT3|SCAM1_ARATH Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1

 Score =  400 bits (1029), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/341 (63%), Positives = 250/341 (73%), Gaps = 60/341 (17%)

Query: 3   GRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPA 62
            RY S+ FD+ E+NPF++P                       SVP AT S+LSPLP EP 
Sbjct: 2   SRYQSHSFDDGEINPFANPT----------------------SVPAAT-SKLSPLPPEP- 37

Query: 63  GFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKNW 122
              ++R A +DIPLD+  DLK KEKEL+ KEAEL+RREQ+++RKE+A A+AGIV+EEKNW
Sbjct: 38  ---YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNW 94

Query: 123 PPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLA 182
           PPFFP+IHHDI+NEIPIHLQR+QYVAF + LGL +CLLWNIVAVTTAWIKGEG  IWFLA
Sbjct: 95  PPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLA 154

Query: 183 IIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTES 242
           IIYFI+GVPGAYV+WYRPLYRA                                  RT+S
Sbjct: 155 IIYFISGVPGAYVMWYRPLYRAM---------------------------------RTDS 181

Query: 243 AMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGL 302
           A+KFGWFF  YL HI FC+FA+VAPPIIFKGKSLTG+LPA+DV+  + LVGIFYFIGFG 
Sbjct: 182 ALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVGIFYFIGFGF 241

Query: 303 FCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           FCLESLVSIWVIQQVYMYFRGSGKAAEMK+EA R AM AAL
Sbjct: 242 FCLESLVSIWVIQQVYMYFRGSGKAAEMKQEATRRAMMAAL 282

Probably involved in membrane trafficking.

Arabidopsis thaliana (taxid: 3702)

>sp|Q60EA5|SCAM3_ORYSJ Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1

 Score =  394 bits (1012), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/343 (61%), Positives = 253/343 (73%), Gaps = 61/343 (17%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAG++  N F++++VNPF+                GG       SVPPA NSRL PL HE
Sbjct: 1   MAGKHGRNGFEDDDVNPFA----------------GG-------SVPPANNSRLPPLSHE 37

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           PA F       +DIPLD++ DLKKKEKELQA EAEL +RE++++RKEEAAA+AGIV+E+K
Sbjct: 38  PADFY-----NVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDK 92

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFP+IHH+I+NEIPIHLQR+QY+AF+++LGL  CL WNI+A TTAW+KGEGV IW 
Sbjct: 93  NWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWL 152

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFI+GVPGAYVLWYRPLY A                                  RT
Sbjct: 153 LAIIYFISGVPGAYVLWYRPLYNAM---------------------------------RT 179

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFFLFYL+HI FC++A+VAPP  FKGKSL G+LPA+DV+G  A+VGIFYF+GF
Sbjct: 180 ESALKFGWFFLFYLIHIIFCVWAAVAPPFPFKGKSLAGILPAIDVIGRSAIVGIFYFVGF 239

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFCLESL+SI VIQQVYMYFRGSGKAAEMKREAARGA+ +A 
Sbjct: 240 GLFCLESLLSIGVIQQVYMYFRGSGKAAEMKREAARGALSSAF 282

Probably involved in membrane trafficking.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LR68|SCAM2_ARATH Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1

 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/341 (57%), Positives = 236/341 (69%), Gaps = 59/341 (17%)

Query: 3   GRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPA 62
            R+D NPF +EE+NPF+                      N  SVPPA+NS L PLP EP 
Sbjct: 2   ARHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEP- 38

Query: 63  GFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKNW 122
              ++R A +DIPLD+  DL+ KE ELQAKE EL+R+EQ+++R+E+A AR G+V+EEKNW
Sbjct: 39  ---YDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNW 95

Query: 123 PPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLA 182
           P FFP+IHHDI NEIPIHLQ++QYVAF T LGL  CLLWNIVAVT AWIKGEG  IW L+
Sbjct: 96  PEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLS 155

Query: 183 IIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTES 242
           IIYF+AGVPGAYVLWYRPLYRA                                  RT+S
Sbjct: 156 IIYFLAGVPGAYVLWYRPLYRA---------------------------------TRTDS 182

Query: 243 AMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGL 302
           A+KFG FF FY+ HI FC FA+VAPP+IF+GKSLTG LPA++++  +A VGI YFIG G 
Sbjct: 183 ALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIELLTTNAAVGIMYFIGAGF 242

Query: 303 FCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           FC+E+L++IWVIQQVY YFRGSGKAAEMKREA +  +  AL
Sbjct: 243 FCIETLLNIWVIQQVYAYFRGSGKAAEMKREATKSTLMRAL 283

Probably involved in membrane trafficking.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
255634598	310	unknown [Glycine max]	0.903	1.0	0.752	1e-150
356555064	310	PREDICTED: putative secretory carrier-as	0.903	1.0	0.746	1e-148
192910838	310	secretory carrier membrane protein [Elae	0.903	1.0	0.743	1e-145
356549393	310	PREDICTED: LOW QUALITY PROTEIN: putative	0.874	0.967	0.726	1e-140
255560808	308	secretory carrier membrane protein, puta	0.895	0.996	0.735	1e-137
217072518	311	unknown [Medicago truncatula]	0.900	0.993	0.723	1e-136
363808380	298	uncharacterized protein LOC100815455 [Gl	0.839	0.966	0.705	1e-135
259490150	305	SC3 protein [Zea mays] gi|195624852|gb|A	0.886	0.996	0.663	1e-131
296080962	273	unnamed protein product [Vitis vinifera]	0.795	1.0	0.685	1e-128
359806511	288	uncharacterized protein LOC100795535 [Gl	0.839	1.0	0.702	1e-127

>gi|255634598|gb|ACU17661.1| unknown [Glycine max]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/343 (75%), Positives = 284/343 (82%), Gaps = 33/343 (9%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYDSNPFDEEEVNPFSDP+VRGK+S QS F GG F+TTN  SVP ATNSRL PL  E
Sbjct: 1   MAGRYDSNPFDEEEVNPFSDPSVRGKTSSQSNFSGGAFYTTNPGSVPAATNSRLPPLKPE 60

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           P  +N+   A +DIPLD++ DLKKKEKELQAKE ELR+REQ+VRRKEEAA+RAGIVLEEK
Sbjct: 61  PVDYNYGFGATVDIPLDSSMDLKKKEKELQAKETELRKREQEVRRKEEAASRAGIVLEEK 120

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQ+LQYVAF T LGL LCL WN++AVT AWIKGEGVKIWF
Sbjct: 121 NWPPFFPIIHHDIANEIPIHLQKLQYVAFTTLLGLVLCLFWNVIAVTAAWIKGEGVKIWF 180

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAGVPGAYVLWYRPLYRAF                                 R 
Sbjct: 181 LAIIYFIAGVPGAYVLWYRPLYRAF---------------------------------RN 207

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFFLFYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GDHAL+GIFYF+GF
Sbjct: 208 ESALKFGWFFLFYLLHIGFCILAAVAPPIVFKGKSLTGILAAIDVLGDHALIGIFYFVGF 267

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFC+E+L+SIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA+
Sbjct: 268 GLFCIETLISIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAI 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555064|ref|XP_003545859.1| PREDICTED: putative secretory carrier-associated membrane protein 1-like [Glycine max]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/343 (74%), Positives = 285/343 (83%), Gaps = 33/343 (9%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MA RYDSNPFDEEEVNPFS+PAVRGK+S QS + GG F+TTN  SV PATNSRLSPL  E
Sbjct: 1   MAHRYDSNPFDEEEVNPFSEPAVRGKTSSQSSYSGGAFYTTNPGSVAPATNSRLSPLNPE 60

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           PA +N+   A +DIPLD + DLKKKEKELQAKEAELR+REQ+VRRKEEAAARAGIVLEEK
Sbjct: 61  PADYNYGFGATVDIPLDPSTDLKKKEKELQAKEAELRKREQEVRRKEEAAARAGIVLEEK 120

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQRLQYVAF + LGL LCL WNIVAVT+AWIKGEGVKIWF
Sbjct: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGLALCLTWNIVAVTSAWIKGEGVKIWF 180

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAG+PGAYVLWYRPLYRAF                                 RT
Sbjct: 181 LAIIYFIAGIPGAYVLWYRPLYRAF---------------------------------RT 207

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           +SA+ FGWFFLFYLLH+GFCI A+VAPPI+FKGKSLTG+L A+DV+GDHA++GIFYF+GF
Sbjct: 208 DSALNFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVVGDHAVIGIFYFVGF 267

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFC+E+L+SIWVIQQVYMYFRGSGKAAEMK+EAARGAMR A+
Sbjct: 268 GLFCIETLISIWVIQQVYMYFRGSGKAAEMKQEAARGAMRDAI 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910838|gb|ACF06527.1| secretory carrier membrane protein [Elaeis guineensis]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 255/343 (74%), Positives = 284/343 (82%), Gaps = 33/343 (9%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYDSNPFDEEEVNPF+DPA RGK++GQS +GGG F+TT   SVPPA NSRLSPLP E
Sbjct: 1   MAGRYDSNPFDEEEVNPFADPAGRGKAAGQSSYGGGPFYTTRPGSVPPALNSRLSPLPPE 60

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           PA F  +R A +DIPLDTA DLKKKE+ELQAKEAEL +RE++++R EEAA+RAGIV+EEK
Sbjct: 61  PADFYNDRSATVDIPLDTAKDLKKKERELQAKEAELNKREKELKRLEEAASRAGIVIEEK 120

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQRLQY AFA+ LGL  CLLWN VAVT AWIKGEGVKIWF
Sbjct: 121 NWPPFFPIIHHDIANEIPIHLQRLQYFAFASLLGLTACLLWNFVAVTVAWIKGEGVKIWF 180

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFI+GVPGAYVLWYRPLYRA                                  RT
Sbjct: 181 LAIIYFISGVPGAYVLWYRPLYRAM---------------------------------RT 207

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFG FFLFYLLHIGFCI+++VAPPIIFKGKSLTG+LPA+D++ DH LVGIFYFIGF
Sbjct: 208 ESALKFGRFFLFYLLHIGFCIYSAVAPPIIFKGKSLTGILPAIDLISDHVLVGIFYFIGF 267

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFC+ESL+S+WVIQQVYMYFRGSGKAAEMKREAARGAMRAA+
Sbjct: 268 GLFCVESLLSVWVIQQVYMYFRGSGKAAEMKREAARGAMRAAI 310

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549393|ref|XP_003543078.1| PREDICTED: LOW QUALITY PROTEIN: putative secretory carrier-associated membrane protein 1-like [Glycine max]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/333 (72%), Positives = 273/333 (81%), Gaps = 33/333 (9%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MA RYDSNPFDEEEVNPFS+PAVRGK+S QS + GG F+TTN  SV PATNSRLSPL  E
Sbjct: 1   MAHRYDSNPFDEEEVNPFSEPAVRGKTSSQSSYSGGAFYTTNPGSVAPATNSRLSPLNPE 60

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           PA +N+   A +DI LD + DLKKKEKELQAKE ELR+REQ+VRRKEEAAARAGIVLEEK
Sbjct: 61  PADYNYGFGATVDIRLDPSMDLKKKEKELQAKENELRKREQEVRRKEEAAARAGIVLEEK 120

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQRLQYVAF + LG  LC+ WNIVAVT+AWIKGEGVKIWF
Sbjct: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFTSLLGFALCITWNIVAVTSAWIKGEGVKIWF 180

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAG+PGAYVLWYRPLYRAF                                 RT
Sbjct: 181 LAIIYFIAGIPGAYVLWYRPLYRAF---------------------------------RT 207

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           +SA+ FGWFFLFYLLH+GFCI A+VAPPI+FKGKSLTG+L A+DV+G+HA++GIFYF+GF
Sbjct: 208 DSALNFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVVGNHAVIGIFYFVGF 267

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKRE 333
           GLFC+E+L+S+WVIQQVYMYFRGSGKAAEMK+E
Sbjct: 268 GLFCIETLISVWVIQQVYMYFRGSGKAAEMKQE 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560808|ref|XP_002521417.1| secretory carrier membrane protein, putative [Ricinus communis] gi|223539316|gb|EEF40907.1| secretory carrier membrane protein, putative [Ricinus communis]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/344 (73%), Positives = 283/344 (82%), Gaps = 37/344 (10%)

Query: 1   MAGRY-DSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPH 59
           MAGR+ D NPFDEEEVNPFSDP VRGK+S Q +F GG F+T   AS PP +NSRLSPLP 
Sbjct: 1   MAGRHNDPNPFDEEEVNPFSDPVVRGKASSQQKFSGGAFYT---ASAPPPSNSRLSPLPP 57

Query: 60  EPAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEE 119
           EPA F ++  A +DIP+D+A DL+KKEKELQAKEAELRRREQDV+R+E+AAARAGIVLEE
Sbjct: 58  EPADFGYDHGATVDIPIDSATDLRKKEKELQAKEAELRRREQDVKRREDAAARAGIVLEE 117

Query: 120 KNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIW 179
           KNWPPFFPIIHHDIANEIPIHLQR+QYVAF T+LGL LCL WNI+AVTTAWIKGEGVKIW
Sbjct: 118 KNWPPFFPIIHHDIANEIPIHLQRIQYVAFTTFLGLVLCLFWNIIAVTTAWIKGEGVKIW 177

Query: 180 FLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCR 239
           FLA+IYFIAGVPGAY+LWYRPLYRAF                                 R
Sbjct: 178 FLAVIYFIAGVPGAYILWYRPLYRAF---------------------------------R 204

Query: 240 TESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIG 299
            ESA+KFGWFFLFYL+H+GFCI A+VAPPIIFKGKS TG+L A+DV+GDHALVGIFYFIG
Sbjct: 205 NESALKFGWFFLFYLVHLGFCILAAVAPPIIFKGKSFTGILSAIDVVGDHALVGIFYFIG 264

Query: 300 FGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           FG FCLE ++SIWV+QQVYMYFRGSGKAAEMKREAARGAMRAA+
Sbjct: 265 FGFFCLELVLSIWVLQQVYMYFRGSGKAAEMKREAARGAMRAAI 308

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072518|gb|ACJ84619.1| unknown [Medicago truncatula]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/343 (72%), Positives = 280/343 (81%), Gaps = 34/343 (9%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRY+SNPFDEEEVNPFS+PA +GK+S QS + GG F+TTN  SVPPA NSRLSPL  E
Sbjct: 1   MAGRYESNPFDEEEVNPFSEPAAKGKTSSQSNYSGGAFYTTNPGSVPPAKNSRLSPLEPE 60

Query: 61  PAGFN-FERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEE 119
           PA +N +   A +DIPLDT+ DLKK+EKELQ+KEAELRRREQ+VRRKEEAAARAGIVLEE
Sbjct: 61  PADYNNYGFGATVDIPLDTSTDLKKREKELQSKEAELRRREQEVRRKEEAAARAGIVLEE 120

Query: 120 KNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIW 179
           KNWPPFFPIIHHDIANEIP+HLQ+LQYVAF TYLGL  CLLWN++AVT AWIKGEGVKIW
Sbjct: 121 KNWPPFFPIIHHDIANEIPVHLQKLQYVAFTTYLGLVACLLWNVIAVTAAWIKGEGVKIW 180

Query: 180 FLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCR 239
           FLAIIYFI+GVPGAYVLWYRPLYR F                                 R
Sbjct: 181 FLAIIYFISGVPGAYVLWYRPLYRVF---------------------------------R 207

Query: 240 TESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIG 299
           TESA+KFGWFF+ YL+HIGFCI A+VAPPI+FKGKSLTG+L A+DV+ +  L+GIFYFIG
Sbjct: 208 TESALKFGWFFMLYLVHIGFCILAAVAPPIVFKGKSLTGILSAIDVIDNSTLIGIFYFIG 267

Query: 300 FGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 342
           FG FCLE+L+SIWVIQQVYMYFRGSGKAAEMKR+ ARGA+RAA
Sbjct: 268 FGFFCLETLISIWVIQQVYMYFRGSGKAAEMKRDVARGAVRAA 310

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808380|ref|NP_001242258.1| uncharacterized protein LOC100815455 [Glycine max] gi|255641198|gb|ACU20876.1| unknown [Glycine max]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 266/343 (77%), Gaps = 55/343 (16%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRY SNPFDEEEVNPFS+P                       SVP ATNSRL PL  E
Sbjct: 1   MAGRYGSNPFDEEEVNPFSNPG----------------------SVPAATNSRLPPLKPE 38

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           P  +N+  DA +DIPLD++ DLKKKEKELQAKE ELR+REQ+VRRKEEAA+RAGIVLEEK
Sbjct: 39  PVDYNYGFDATVDIPLDSSMDLKKKEKELQAKETELRKREQEVRRKEEAASRAGIVLEEK 98

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQ+LQYVAF T LGL LCL WN++AVT AWIKGEGVKIWF
Sbjct: 99  NWPPFFPIIHHDIANEIPIHLQKLQYVAFTTLLGLVLCLFWNVIAVTAAWIKGEGVKIWF 158

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAGVPGAYVLWYRPLYRAF                                 R 
Sbjct: 159 LAIIYFIAGVPGAYVLWYRPLYRAF---------------------------------RN 185

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFFLFYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GDHAL+GIFYF+GF
Sbjct: 186 ESALKFGWFFLFYLLHIGFCILAAVAPPIVFKGKSLTGILAAIDVLGDHALIGIFYFVGF 245

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFC+E+L+SIWVIQQVYMYFRGSGKAAEMKREAA GAMRAA+
Sbjct: 246 GLFCIETLISIWVIQQVYMYFRGSGKAAEMKREAAWGAMRAAI 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259490150|ref|NP_001158996.1| SC3 protein [Zea mays] gi|195624852|gb|ACG34256.1| SC3 protein [Zea mays] gi|224035591|gb|ACN36871.1| unknown [Zea mays] gi|414887137|tpg|DAA63151.1| TPA: SC3 protein [Zea mays]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/342 (66%), Positives = 274/342 (80%), Gaps = 38/342 (11%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYD NPF+EE+VNPFS+ A RGK+ GQS FGGG F+  N+ ++PPA+NSRLSPLP E
Sbjct: 1   MAGRYDGNPFEEEDVNPFSEQA-RGKAGGQSNFGGGAFYMPNTRNMPPASNSRLSPLPPE 59

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           PA F+    A +DIPLD++ DLK++EKELQA+EAEL +RE++++R+EEAAARAGIV+EEK
Sbjct: 60  PADFS----ATVDIPLDSSKDLKRREKELQAREAELNKREKELKRREEAAARAGIVIEEK 115

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL  CL WN++AVTTAWIKGEGVKIW 
Sbjct: 116 NWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLVCCLFWNVIAVTTAWIKGEGVKIWL 175

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFI+GVPGAYVLWYRPLY A                                  RT
Sbjct: 176 LAIIYFISGVPGAYVLWYRPLYNAM---------------------------------RT 202

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           +SA+KFG FFL Y+ HI FC+F++VAPP++F+GKSL G+LPA+D++  +ALVGIFYF+GF
Sbjct: 203 DSALKFGLFFLLYVFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISVNALVGIFYFVGF 262

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 342
           GLFCLESL+SIWVIQQVYMYFRGSGKAAEMKR+A RGAMRAA
Sbjct: 263 GLFCLESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAA 304

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296080962|emb|CBI18594.3| unnamed protein product [Vitis vinifera]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/343 (68%), Positives = 258/343 (75%), Gaps = 70/343 (20%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MA RYD NPFDEEEVNPFSDPAVRGK+S  + +GGG F+TTN  S               
Sbjct: 1   MARRYDPNPFDEEEVNPFSDPAVRGKTS--TNYGGGAFYTTNPGS--------------- 43

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
                               DLKKKE+ELQAKEAELR+REQ+V+RKE+AAARAGIVLEEK
Sbjct: 44  --------------------DLKKKERELQAKEAELRKREQEVKRKEDAAARAGIVLEEK 83

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQ+LQYVAF T+LGL  CL WNI+A TTAWIKGEGVKIWF
Sbjct: 84  NWPPFFPIIHHDIANEIPIHLQKLQYVAFTTFLGLACCLTWNIIATTTAWIKGEGVKIWF 143

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAGVPGAYVLWYRPLYRAF                                 R 
Sbjct: 144 LAIIYFIAGVPGAYVLWYRPLYRAF---------------------------------RN 170

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFF+FYLLHI FCIFA+VAPP+IF GKSLTG+LPAVD++GDH LVGIFYFIGF
Sbjct: 171 ESALKFGWFFMFYLLHIAFCIFAAVAPPVIFHGKSLTGILPAVDLIGDHVLVGIFYFIGF 230

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           G+FC+ES++SIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL
Sbjct: 231 GMFCVESVLSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806511|ref|NP_001241001.1| uncharacterized protein LOC100795535 [Glycine max] gi|255636760|gb|ACU18714.1| unknown [Glycine max]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 267/343 (77%), Gaps = 55/343 (16%)

Query: 1   MAGRYDSNPFDEEEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHE 60
           MAGRYDSNPFDEEEVNPF +P                       SVP ATNSRLSPL  E
Sbjct: 1   MAGRYDSNPFDEEEVNPFYNPG----------------------SVPAATNSRLSPLKPE 38

Query: 61  PAGFNFERDAPIDIPLDTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEK 120
           P  +N+   A +DIPLD++ DLKKKEKELQAKE ELR+REQ+VRR+EEAA+RAGIVLEEK
Sbjct: 39  PVDYNYGFGATVDIPLDSSTDLKKKEKELQAKETELRKREQEVRRREEAASRAGIVLEEK 98

Query: 121 NWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWF 180
           NWPPFFPIIHHDIANEIPIHLQ+LQYVAF T LGL LCL WN++AVT AWIKGEGVKIWF
Sbjct: 99  NWPPFFPIIHHDIANEIPIHLQKLQYVAFTTLLGLVLCLFWNVIAVTAAWIKGEGVKIWF 158

Query: 181 LAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRT 240
           LAIIYFIAGVPGAYVLWYRPLYRAF                                 R 
Sbjct: 159 LAIIYFIAGVPGAYVLWYRPLYRAF---------------------------------RN 185

Query: 241 ESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGF 300
           ESA+KFGWFF+FYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GDHAL+GIFYFIGF
Sbjct: 186 ESALKFGWFFMFYLLHIGFCILAAVAPPIVFKGKSLTGILAAIDVLGDHALIGIFYFIGF 245

Query: 301 GLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 343
           GLFC+E+L+SIWVIQQVYMYFRGSGKAAEMKREAARGA+RAA+
Sbjct: 246 GLFCVETLISIWVIQQVYMYFRGSGKAAEMKREAARGALRAAI 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2008465	289	SC3 "secretory carrier 3" [Ara	0.478	0.567	0.682	1.9e-112
TAIR|locus:2051409	282	SCAMP3 "Secretory carrier memb	0.460	0.560	0.656	1.2e-106
UNIPROTKB|Q8H5X5	306	SCAMP1 "Secretory carrier-asso	0.580	0.650	0.585	3.1e-106
TAIR|locus:2020828	283	SCAMP4 "Secretory carrier memb	0.463	0.561	0.619	8.9e-97
TAIR|locus:2195371	264	SCAMP5 "Secretory carrier memb	0.434	0.564	0.503	7.3e-82
UNIPROTKB|O15127	329	SCAMP2 "Secretory carrier-asso	0.565	0.589	0.266	2.2e-19
UNIPROTKB|F1SJ46	328	SCAMP2 "Uncharacterized protei	0.562	0.588	0.269	1.3e-18
ZFIN|ZDB-GENE-040426-2702	326	scamp2 "secretory carrier memb	0.559	0.588	0.281	1.3e-18
ZFIN|ZDB-GENE-030131-6432	325	scamp2l "secretory carrier mem	0.303	0.32	0.384	4e-18
UNIPROTKB|J9NWF8	329	SCAMP2 "Uncharacterized protei	0.562	0.586	0.276	1.5e-17

TAIR|locus:2008465 SC3 "secretory carrier 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 1.9e-112, Sum P(3) = 1.9e-112
 Identities = 112/164 (68%), Positives = 126/164 (76%)

Query:    42 NSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQ 101
             N+  VPPA+NSRLSPLP EP GF++ R   I +                      +RREQ
Sbjct:    21 NARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQ 80

Query:   102 DVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLW 161
             D++RKE+AAARAGIV+E KNWPPFFP+IHHDIANEIP+HLQRLQYV FATYLGL LCL W
Sbjct:    81 DLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFW 140

Query:   162 NIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAF 205
             NI+AVTTAWIKGEGV IW LA+IYFIAGVPG YVLWYRPLYRAF
Sbjct:   141 NIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAF 184

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2051409 SCAMP3 "Secretory carrier membrane protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 1.2e-106, Sum P(3) = 1.2e-106
 Identities = 107/163 (65%), Positives = 125/163 (76%)

Query:    42 NSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQ 101
             N  SVP AT S+LSPLP EP    ++R A +DIP                     +RREQ
Sbjct:    19 NPTSVPAAT-SKLSPLPPEP----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQ 73

Query:   102 DVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLW 161
             +++RKE+A A+AGIV+EEKNWPPFFP+IHHDI+NEIPIHLQR+QYVAF + LGL +CLLW
Sbjct:    74 EIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLW 133

Query:   162 NIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRA 204
             NIVAVTTAWIKGEG  IWFLAIIYFI+GVPGAYV+WYRPLYRA
Sbjct:   134 NIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRA 176

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

UNIPROTKB|Q8H5X5 SCAMP1 "Secretory carrier-associated membrane protein 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 627 (225.8 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
 Identities = 120/205 (58%), Positives = 144/205 (70%)

Query:     1 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPH 59
             MAGRYDSNPF+E++VNPFS+ A R                 N  +VP  ++NSRLSPLP 
Sbjct:     1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPP 59

Query:    60 EPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEE 119
             EPA F     A +DIP                      +RE++++R+EEAAARAGIV+EE
Sbjct:    60 EPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEE 115

Query:   120 KNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIW 179
             KNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL  CL WN++AVT+AW+KGEGVKIW
Sbjct:   116 KNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIW 175

Query:   180 FLAIIYFIAGVPGAYVLWYRPLYRA 204
              LAIIYFI+GVPGAYVLWYRPLY A
Sbjct:   176 LLAIIYFISGVPGAYVLWYRPLYNA 200

GO:0005769 "early endosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006897 "endocytosis" evidence=ISS

GO:0006898 "receptor-mediated endocytosis" evidence=ISS

TAIR|locus:2020828 SCAMP4 "Secretory carrier membrane protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 8.9e-97, Sum P(3) = 8.9e-97
 Identities = 101/163 (61%), Positives = 119/163 (73%)

Query:    42 NSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQ 101
             N  SVPPA+NS L PLP EP    ++R A +DIP                     +R+EQ
Sbjct:    19 NHTSVPPASNSYLKPLPPEP----YDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQ 74

Query:   102 DVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLW 161
             +++R+E+A AR G+V+EEKNWP FFP+IHHDI NEIPIHLQ++QYVAF T LGL  CLLW
Sbjct:    75 ELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLW 134

Query:   162 NIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRA 204
             NIVAVT AWIKGEG  IW L+IIYF+AGVPGAYVLWYRPLYRA
Sbjct:   135 NIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRA 177

GO:0005886 "plasma membrane" evidence=ISM

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2195371 SCAMP5 "Secretory carrier membrane protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
 Identities = 75/149 (50%), Positives = 100/149 (67%)

Query:    56 PLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGI 115
             P    P  +    DA +DIP                     R++E D++R+EEA A+ G+
Sbjct:    28 PAASRPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGV 87

Query:   116 VLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEG 175
              +++KNWPPFFPIIHHDIA EIP+H Q+LQY+AFA++LG+ LCL++N++A    WIKG G
Sbjct:    88 QIDDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGG 147

Query:   176 VKIWFLAIIYFIAGVPGAYVLWYRPLYRA 204
             VKI+FLA IY + G P +YVLWYRPLYRA
Sbjct:   148 VKIFFLATIYALIGCPLSYVLWYRPLYRA 176

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

UNIPROTKB|O15127 SCAMP2 "Secretory carrier-associated membrane protein 2" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
 Identities = 57/214 (26%), Positives = 90/214 (42%)

Query:     5 YDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXX--XTTNSASVPPATNSRLSPLPHEP 61
             +D+NPF D  +VNPF DP+V                   TN+A+  P T     P   +P
Sbjct:     4 FDTNPFADPVDVNPFQDPSVTQLTNAPQGGLAEFNPFSETNAATTVPVTQL---PGSSQP 60

Query:    62 AGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAAR--AGIVLEE 119
             A      +     P                      R+  ++ RKE       A + + +
Sbjct:    61 AVLQPSVEPTQPTPQAVVSAAQAGLLRQQEELD---RKAAELERKERELQNTVANLHVRQ 117

Query:   120 KNWPPF------FPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKG 173
              NWPP        P  + D + EIP   QR+  + +  ++   + L  N++A   AW  G
Sbjct:   118 NNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACL-AWFSG 176

Query:   174 EGVK-IWF-LAIIYFIAGVPGAYVLWYRPLYRAF 205
                K + F L+I++F+   P A++ WYRP+Y+AF
Sbjct:   177 NSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAF 210

GO:0032588 "trans-Golgi network membrane" evidence=IDA

GO:0055038 "recycling endosome membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

GO:0015031 "protein transport" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F1SJ46 SCAMP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 182 (69.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 58/215 (26%), Positives = 89/215 (41%)

Query:     5 YDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXX--XTTNSASVPPATNSRLSPLPHEP 61
             +D+NPF D  +VNPF DP+V                   TN+A+  P T     P P +P
Sbjct:     4 FDTNPFADPVDVNPFQDPSVTQLTNAPQGGLAEFNPFSETNAATTVPVTQL---PGPSQP 60

Query:    62 AGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAAR--AGIVLEE 119
             A      +     P                      R+  ++ RKE       A + + E
Sbjct:    61 AVLQPSVEPTQPTPQAVASAAQASLLRQQEELD---RKAAELERKERELQNTVANLHVRE 117

Query:   120 KNWPPF------FPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWI-- 171
              NWPP        P  + D + EIP   QR+  + +  ++   + L  N++A   AW   
Sbjct:   118 NNWPPLPIWCPIKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACL-AWFLV 176

Query:   172 -KGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAF 205
                 GV    L+I++F+   P A++ WYRP+Y+AF
Sbjct:   177 DTSRGVDFG-LSILWFVIFTPCAFLCWYRPIYKAF 210

GO:0055038 "recycling endosome membrane" evidence=IEA

GO:0032588 "trans-Golgi network membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

ZFIN|ZDB-GENE-040426-2702 scamp2 "secretory carrier membrane protein 2" [Danio rerio (taxid:7955)]

 Score = 186 (70.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 61/217 (28%), Positives = 95/217 (43%)

Query:     1 MAGRYDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXXXTT--NSASVPPATNSRLSPL 57
             M+G +DSNPF D  +VNPF DP+V                    N  S  PA+++     
Sbjct:     1 MSG-FDSNPFADPVDVNPFQDPSVTQVTNSGVDHIESFSPFPDGNQGSTIPASSA----- 54

Query:    58 PHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVL 117
             P +PA        P   P                     R+  +  RR++E  +R     
Sbjct:    55 PTQPAVLQ-----PSVEPSPQATAAAAQASLIKQQEELERKAAELERREQELQSRGAPTG 109

Query:   118 EEKNWPPF---FPI---IHHDIANEIPIHLQRLQYVAFATYLGLFLC--LLWNIVAVTTA 169
             ++ NWPP    FPI    + D + EIP   QRL  + +  YL ++ C  L  N++A    
Sbjct:   110 KQNNWPPLPKRFPIQPCFYQDFSEEIPQEHQRLCKMIY--YLWMWECVTLFLNVLACLAD 167

Query:   170 WIKGEGVKIWF-LAIIYFIAGVPGAYVLWYRPLYRAF 205
             +       + F L+I++FI   P +++ W+RP+Y+AF
Sbjct:   168 FTTNSEAGVDFGLSILWFILFAPCSFICWFRPVYKAF 204

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

ZFIN|ZDB-GENE-030131-6432 scamp2l "secretory carrier membrane protein 2, like" [Danio rerio (taxid:7955)]

 Score = 151 (58.2 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
 Identities = 48/125 (38%), Positives = 67/125 (53%)

Query:    98 RREQDVRRKEEAAARAGIVLEEKNWPP---FFPI---IHHDIANEIPIHLQR----LQYV 147
             R+EQ++R ++  AAR     +E NWPP   F PI    + D   EIP+  QR    + Y+
Sbjct:    97 RKEQELRDRD--AARG----KENNWPPLPKFLPIKPCFYQDFNEEIPVEYQRVCKMMYYL 150

Query:   148 AFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSF 207
                  + LFL LL  +V  T +     GV    L+I++FI   P A+V WYRP+Y+AF  
Sbjct:   151 WMYHSVTLFLNLLACLVYFTVS--TQNGVDFG-LSILWFILFTPVAFVCWYRPVYKAF-- 205

Query:   208 KRDCS 212
             K D S
Sbjct:   206 KSDSS 210

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|J9NWF8 SCAMP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 178 (67.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
 Identities = 59/213 (27%), Positives = 92/213 (43%)

Query:     6 DSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXX--XTTNSASVPPATNSRLSPLPHEPA 62
             D+NPF D  +VNPF DP+V                   TN+A+  P T     P P +PA
Sbjct:     5 DTNPFADPVDVNPFQDPSVTQLTNAPQGSLAEFNPFSETNAATTVPVTQL---PGPSQPA 61

Query:    63 GFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEA--AARAGIVLEEK 120
                   +     P                      R+  ++ RKE    +  A + + E 
Sbjct:    62 VLQPSVEPTQPTPQAVASAAQASLLRQQEELD---RKAAELERKERELQSTVASLHVREN 118

Query:   121 NWPP--FF----PIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGE 174
             NWPP  F+    P  + D + EIP   QR+  + +  ++   + L  N++A   AW   +
Sbjct:   119 NWPPLPFWCPVKPCFYQDFSVEIPADYQRICKMLYYLWMLHSVTLFLNLLACL-AWFLVD 177

Query:   175 GVK-IWF-LAIIYFIAGVPGAYVLWYRPLYRAF 205
               K + F L+I++ I   P A++ WYRP+Y+AF
Sbjct:   178 SSKGVDFGLSILWLIMFTPCAFLCWYRPIYKAF 210

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZTX0	SCAM_PEA	No assigned EC number	0.6516	0.8104	0.9619	N/A	no
A2YMP7	SCAM1_ORYSI	No assigned EC number	0.6472	0.8862	0.9934	N/A	no
Q8H5X5	SCAM1_ORYSJ	No assigned EC number	0.6472	0.8862	0.9934	yes	no
Q9M5P2	SCAM3_ARATH	No assigned EC number	0.6560	0.8338	0.9896	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
pfam04144	177	pfam04144, SCAMP, SCAMP family	1e-73
pfam12072	201	pfam12072, DUF3552, Domain of unknown function (DU	6e-04
pfam13025	70	pfam13025, DUF3886, Protein of unknown function (D	0.001

>gnl|CDD|190882 pfam04144, SCAMP, SCAMP family

 Score =  225 bits (575), Expect = 1e-73
 Identities = 76/214 (35%), Positives = 109/214 (50%), Gaps = 43/214 (20%)

Query: 118 EEKNWPPFF------PIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWI 171
            E NWPP        P  +HDI+ EIP+  QRL Y  +  +LGL L L +NI+A    +I
Sbjct: 1   RENNWPPLPSFCPVKPCFYHDISEEIPVEYQRLVYFLYYLWLGLVLTLFYNIIACLALFI 60

Query: 172 KGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFL 231
            G G   + L+I+YFI G PG++V WYRP+Y+AF                          
Sbjct: 61  GGGGGTDFGLSILYFILGTPGSFVCWYRPVYKAF-------------------------- 94

Query: 232 SHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHAL 291
                  RT+S+  F WFF  + LHI FCI  +V  P       L G + A+ +   +  
Sbjct: 95  -------RTDSSFNFFWFFFIFFLHILFCIIQAVGIPGW----GLCGWITAISLFSTNVA 143

Query: 292 VGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSG 325
           VGIF  I   LF LE+L+S+ ++++V+  +RG+G
Sbjct: 144 VGIFMLIVAILFTLEALLSVILLKKVHRLYRGTG 177

In vertebrates, secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats, four central transmembrane regions (TMRs), and a cytoplasmic tail. SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences. Length = 177

>gnl|CDD|221408 pfam12072, DUF3552, Domain of unknown function (DUF3552)

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 80  ADLKKKEKELQAKEAELRRREQDVRRKEE 108
             L+KKE+ L+ KE EL  R+Q +  KEE
Sbjct: 99  ESLEKKEESLEEKEKELAARQQQLEEKEE 127

This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. This domain is about 200 amino acids in length. This domain is found associated with pfam00013, pfam01966. This domain has a single completely conserved residue A that may be functionally important. Length = 201

>gnl|CDD|205206 pfam13025, DUF3886, Protein of unknown function (DUF3886)

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 7/45 (15%)

Query: 77  DTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKN 121
           D  A LK K+KEL+A+E + R  E++ R++EE   R      EKN
Sbjct: 17  DLLAKLKAKKKELKAEEEK-REEEEEARKREERKER------EKN 54

This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There are two completely conserved L residues that may be functionally important. Length = 70

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG3088	313	consensus Secretory carrier membrane protein [Intr	100.0
PF04144	177	SCAMP: SCAMP family; InterPro: IPR007273 In verteb	100.0
KOG3088	313	consensus Secretory carrier membrane protein [Intr	99.35

>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.1e-97  Score=700.93  Aligned_cols=279  Identities=52%  Similarity=0.939  Sum_probs=257.8

Q ss_pred             CCCCCCCCCCCC-cCCCCCCCccccCcCCCCCcCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccc-
Q 019268            1 MAGRYDSNPFDE-EEVNPFSDPAVRGKSSGQSRFGGGGFFTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPLDT-   78 (343)
Q Consensus         1 Ma~~~d~nPf~~-~~~nPf~DPsVtq~t~~~~~~~~~~f~~~~~~~~~p~~~~~~~p~~~ep~~~~~~~~~~~~~~~~~-   78 (343)
                      |+ +||+|||+| |++|||+||+|+|+.+                      +++++|.++||++++  .+.++|+|++. 
T Consensus         1 ~s-~~d~NPFadp~~~NPF~dp~~~q~~~----------------------~~~~~p~~~~~~~~~--~~~tv~~P~~~~   55 (313)
T KOG3088|consen    1 MS-RYDPNPFAEPELVNPFADPAVVQPAS----------------------TPPLSPLPPEPAPSD--QGPTVDIPLDSP   55 (313)
T ss_pred             CC-CCCCCCCCCcccCCCCCCccccCCcc----------------------CCCCCCCCCCCCCCC--CCCccccCCCCC
Confidence            77 999999999 8899999999987622                      245566666666544  45688888887 


Q ss_pred             ---hhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC------CCCcceeecCCCccchhhHHHHHHHH
Q 019268           79 ---AADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEEKNWP------PFFPIIHHDIANEIPIHLQRLQYVAF  149 (343)
Q Consensus        79 ---~~dL~kKeeEL~rkEaEL~rRE~eL~~re~~~~~~g~~~~~nNWP------Pf~Pi~yhdI~~EIP~~~Qr~Vk~~y  149 (343)
                         .+|+.+||+||+|||+||+|||+||+|||++++++|..+++||||      |++|||||||++|||+|+||+||++|
T Consensus        56 ~~~a~~~~~kq~eL~~rqeEL~Rke~ELdRREr~~a~~g~~~~~nNWPPLP~~~pv~PcfyqD~s~EIPv~~Qk~vk~~y  135 (313)
T KOG3088|consen   56 STQAKDLAKKQAELLKKQEELRRKEQELDRRERALARAGIVIRENNWPPLPSFIPVFPCFYQDISNEIPVEFQKLVKRAY  135 (313)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhccCcccccCCCCCCCCCCcccccccccccccCHHHHHHHHHHH
Confidence               789999999999999999999999999999999999999999999      56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCChhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCCCchhHHHHHHHHhHHHHHH
Q 019268          150 ATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLV  229 (343)
Q Consensus       150 ~lWl~~~~~l~~N~~~~~~~~i~g~~~~~~~laily~i~g~P~sf~~WYrplY~A~~~~r~~~~~~~~~~~~~~~~~~~~  229 (343)
                      |+||++++||+||+++|+++||+|+++++|+|||||+++|+||||+||||||||||                        
T Consensus       136 ylwm~~~~tL~~Niia~la~~i~g~~~~~f~Laii~fllftPcsyVcWyRPlYkAF------------------------  191 (313)
T KOG3088|consen  136 YLWMGLVLTLLWNIIACLAWWIKGGGGTIFGLAIIWFLLFTPCSYVCWYRPLYKAF------------------------  191 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHHHHHHhCCceeeEeehHHHHHh------------------------
Confidence            99999999999999999999999999999999999999999999999999999999                        


Q ss_pred             hhccCCCCcCCccchhHHHHHHHHHHHHHHHHHhhcCCcccccCcccchhHHHHHhhcCCceehHHHHHHHHHHHHHHHH
Q 019268          230 FLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLV  309 (343)
Q Consensus       230 ~~~~~~~~~r~~ss~~f~~ff~~~~~~i~f~i~~aiG~p~~f~g~g~~G~i~ai~~~~~~~~vgi~~~i~~~lf~~~a~~  309 (343)
                               |+|||++|+||||+|++|++|||+++||++    |||.||||.||+.++.+.+|||+|+|++++||+++++
T Consensus       192 ---------RsDSSf~F~~FFF~y~~q~~~~v~qAvgf~----g~~~~G~i~ai~~~~~~i~v~i~m~i~a~~Ft~~av~  258 (313)
T KOG3088|consen  192 ---------RTDSSFNFGAFFFTYFFQIVFCVFQAVGFP----GWGLCGWIPAIDVLSGNIAVGILMLIGAGLFTLEAVL  258 (313)
T ss_pred             ---------ccccchhhHHHHHHHHHHHHHHHHHHHccC----CcchhhhhhHhhccCcchHHHHHHHHHHHHHHHHHHH
Confidence                     999999999999999999999999999955    9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCChHH-HHHHHHHhhhhhh
Q 019268          310 SIWVIQQVYMYFRGSGKAA-EMKREAARGAMRA  341 (343)
Q Consensus       310 s~~~l~~V~~~yR~~G~s~-~ak~e~a~g~~~~  341 (343)
                      ++|+|+|||+||||+|+++ ++|+|+++|+|++
T Consensus       259 ~i~~i~kVh~~yRgsG~sf~kaq~e~~~g~~~~  291 (313)
T KOG3088|consen  259 SIWVLQKVHSYYRGSGASFQKAQEEFTTGVMSN  291 (313)
T ss_pred             HHHHHHHHHHHHHhccHhHHHHHHHHHHHHhhC
Confidence            9999999999999999997 5666666666654

>PF04144 SCAMP: SCAMP family; InterPro: IPR007273 In vertebrates, secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats, four central transmembrane regions (TMRs), and a cytoplasmic tail

Probab=100.00  E-value=3.5e-58  Score=412.49  Aligned_cols=171  Identities=42%  Similarity=0.866  Sum_probs=167.3

Q ss_pred             CCCCCCCCC------cceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCChhHHHHHHHHHHhhhh
Q 019268          118 EEKNWPPFF------PIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVP  191 (343)
Q Consensus       118 ~~nNWPPf~------Pi~yhdI~~EIP~~~Qr~Vk~~y~lWl~~~~~l~~N~~~~~~~~i~g~~~~~~~laily~i~g~P  191 (343)
                      |+|||||++      ||+||||++|||+++||+||++|++||++++||+||++++++.++.|+++++|+||++|+++|+|
T Consensus         1 ~~~NwPp~~~~~~~~P~~y~di~~eIP~~~q~~v~~~y~~w~~~~~~l~~N~i~~~~~~~~~~~~~~~~lai~y~~~~~P   80 (177)
T PF04144_consen    1 RENNWPPFPKFCCIKPCFYHDISEEIPEEFQRLVKRAYYLWLFLAITLFWNFIACLALLIAGGSGSDFGLAILYLLLGTP   80 (177)
T ss_pred             CCCCCCCCccccCCCCeEEeCHhHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceehHHHHHHHHHhH
Confidence            589999999      99999999999999999999999999999999999999999999988778999999999999999


Q ss_pred             hhhhhhhhhhhhhhcccCCCchhHHHHHHHHhHHHHHHhhccCCCCcCCccchhHHHHHHHHHHHHHHHHHhhcCCcccc
Q 019268          192 GAYVLWYRPLYRAFSFKRDCSDRVIADQLALNLVSFLVFLSHYKPSCRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIF  271 (343)
Q Consensus       192 ~sf~~WYrplY~A~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ss~~f~~ff~~~~~~i~f~i~~aiG~p~~f  271 (343)
                      +||+|||||||||+                                 |+||+++|++||+++++|++||++++||+|   
T Consensus        81 ~sf~~wyrplY~A~---------------------------------r~dss~~f~~ff~~~~~~i~f~i~~aIG~p---  124 (177)
T PF04144_consen   81 ASFFCWYRPLYKAF---------------------------------RTDSSFRFMWFFFFFFVHIIFCIIMAIGIP---  124 (177)
T ss_pred             HHHHHHHHHHHHHH---------------------------------hcccchHHHHHHHHHHHHHHHHHHHHhccc---
Confidence            99999999999999                                 999999999999999999999999999999   


Q ss_pred             cCcccchhHHHHHhhcCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 019268          272 KGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSG  325 (343)
Q Consensus       272 ~g~g~~G~i~ai~~~~~~~~vgi~~~i~~~lf~~~a~~s~~~l~~V~~~yR~~G  325 (343)
                       |+|+||||+|++++++|+.+||+++|++++|++++++++|+++|||++||++|
T Consensus       125 -~~G~~G~i~ai~~~~~~~~vgi~~~I~a~~w~~~~~~~~~~l~kv~~~yR~~G  177 (177)
T PF04144_consen  125 -GWGSCGWITAIDVFSNNKAVGILMLIVAILWTLEAVLSFWLLKKVHRYYRGTG  177 (177)
T ss_pred             -cccHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence             89999999999999999999999999999999999999999999999999997

SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences [].; GO: 0015031 protein transport, 0016021 integral to membrane

>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.35  E-value=6.5e-11  Score=114.15  Aligned_cols=86  Identities=28%  Similarity=0.388  Sum_probs=68.5

Q ss_pred             cchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC---CCCCCCCcceeecCCCccchhhHHHHH-HHH---
Q 019268           77 DTAADLKKKEKELQAKEAELRRREQDVRRKEEAAARAGIVLEE---KNWPPFFPIIHHDIANEIPIHLQRLQY-VAF---  149 (343)
Q Consensus        77 ~~~~dL~kKeeEL~rkEaEL~rRE~eL~~re~~~~~~g~~~~~---nNWPPf~Pi~yhdI~~EIP~~~Qr~Vk-~~y---  149 (343)
                      .+++||+||||||+|||+||+|||+++++...+.+..||+|.|   +=.|=|+--|--||.+|.++-..++.+ +|+   
T Consensus        64 ~kq~eL~~rqeEL~Rke~ELdRREr~~a~~g~~~~~nNWPPLP~~~pv~PcfyqD~s~EIPv~~Qk~vk~~yylwm~~~~  143 (313)
T KOG3088|consen   64 KKQAELLKKQEELRRKEQELDRRERALARAGIVIRENNWPPLPSFIPVFPCFYQDISNEIPVEFQKLVKRAYYLWMGLVL  143 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHhhccCcccccCCCCCCCCCCcccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            3788999999999999999999999999855556677999887   345546788999999999987777665 443   


Q ss_pred             HHHHHHHHHHHHH
Q 019268          150 ATYLGLFLCLLWN  162 (343)
Q Consensus       150 ~lWl~~~~~l~~N  162 (343)
                      .+.++++.||.|=
T Consensus       144 tL~~Niia~la~~  156 (313)
T KOG3088|consen  144 TLLWNIIACLAWW  156 (313)
T ss_pred             HHHHHHHHHHHHH
Confidence            3456677888775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	87.36

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=87.36  E-value=0.99  Score=35.03  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=21.5

Q ss_pred             hhHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019268           80 ADLKKKEKELQAKEAELRRREQDVRRKEEAA  110 (343)
Q Consensus        80 ~dL~kKeeEL~rkEaEL~rRE~eL~~re~~~  110 (343)
                      ..|++|.+||.+|++.++++|.+|..++..+
T Consensus        26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI   56 (72)
T 3nmd_A           26 YALQEKIEELRQRDALIDELELELDQKDELI   56 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567777777777777777777776665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00