Citrus Sinensis ID: 019292

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKKglrkagangaragsggygylleplwWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMivlhapleesLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCaprygqtnILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFkdysgqsaSSIASELCGFITVLSGtsvlhstrepdtplitdlytplspkvswYIQGNgelwkkdedgshpnmitirpdyfk
Flexible Loop (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGangaragsggyGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGElwkkdedgshpnmitirpdyfk
Low Complexity Region (SEG)
MFSSNLIGFILAVVSSAFIGSSFIIkkkglrkagangaragsggygylLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Disordered region (IsUnstruct)
****NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWK*******************
Disordered Region (DISOPRED)
*FSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGA*****GSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEE*LNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHS***************************************************
Disordered Region (DISEMBL)
MFSSNLIGFILAVVSSAFIGSSFIIKKK**********RAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Disordered Region (DISPRO)
**SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR*GSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTP**********************SHPNMITIRPDYFK
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMITIRPDYFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.909	0.866	0.452	1e-74
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.909	0.866	0.452	1e-74
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.842	0.802	0.489	1e-74
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.842	0.805	0.489	2e-74
Q8BZF2	406	Magnesium transporter NIP	no	no	0.874	0.738	0.455	3e-69
Q0D2K0	466	Magnesium transporter NIP	no	no	0.848	0.624	0.469	2e-68
Q8BMW7	416	Magnesium transporter NIP	no	no	0.848	0.699	0.489	2e-67
Q5RDB8	410	Magnesium transporter NIP	no	no	0.848	0.709	0.503	8e-63
Q6NVV3	410	Magnesium transporter NIP	no	no	0.848	0.709	0.496	8e-62
Q7RTP0	329	Magnesium transporter NIP	no	no	0.822	0.857	0.391	2e-49

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  280 bits (716), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 208/329 (63%), Gaps = 17/329 (5%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+LI    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V  VK +GIAIK    G    +    WI  +  + CV TQ+NYLN ALD FNT++V+PI
Sbjct: 192 SVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLY 305
           YY  FT+  +  SAI+FK++       +   L GF T++ G  +LH+ ++    L +   
Sbjct: 252 YYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLAS--- 308

Query: 306 TPLSPKVSWYIQGNGELWKKDEDGSHPNM 334
            P+S             ++KDE   + N+
Sbjct: 309 LPVS-------------FRKDEKAMNGNL 324

Acts as a selective Mg(2+) transporter.
Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  280 bits (716), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 208/329 (63%), Gaps = 17/329 (5%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+LI    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V  VK +GIAIK    G    +    WI  +  + CV TQ+NYLN ALD FNT++V+PI
Sbjct: 192 SVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLY 305
           YY  FT+  +  SAI+FK++       +   L GF T++ G  +LH+ ++    L +   
Sbjct: 252 YYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLAS--- 308

Query: 306 TPLSPKVSWYIQGNGELWKKDEDGSHPNM 334
            P+S             ++KDE   + N+
Sbjct: 309 LPVS-------------FRKDEKAMNGNL 324

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 196/290 (67%), Gaps = 1/290 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV V+L+LI    PR+GQTNIL+YI ICSVIG++
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAV 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V   K +GIAIK    G    +   TWI  +  + CV TQ+NYLN ALD FNT++V+PI
Sbjct: 192 SVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
           YY  FT+  I  SAI+FK++       +   L GF T++ G  +LH+ ++
Sbjct: 252 YYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  279 bits (714), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 194/290 (66%), Gaps = 1/290 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA+ SS FIG SFI+KKKGL +    G+ RAG GG+ YL E LWW G+ +M  GE+
Sbjct: 12  IGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS++VSA+L+ + LNE+L   G +GCLL ++GST++V+HAP
Sbjct: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+      P F+++   VV VAL+ I    PR+GQTNIL+YI ICSVIG+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V  VK +GIAIK  L G    +    WI     + CV TQ+NYLN ALD FNT++V+PI
Sbjct: 192 SVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
           YY  FT+  +  SAI+FK++       +   L GF T++ G  +LH+ ++
Sbjct: 252 YYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  262 bits (669), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 200/301 (66%), Gaps = 1/301 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA +S   IG+S I+KKKGL +  A GA RA +GGYGYL +P+WW GM TM  GE+
Sbjct: 60  IGVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEV 119

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA +VTPLGALS+++SA+ + + L E L  +G LGC++C+ GST++V+HAP
Sbjct: 120 ANFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAP 179

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + +V E+        F+++   +V   L+LI   APRYGQ NILIYI ICSVIGS 
Sbjct: 180 KEEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSF 239

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V +VK +G+ I+   +GL   +    +I +++    +I Q+N+LN ALD FNT++V PI
Sbjct: 240 SVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPI 299

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLY 305
           YY  FT+  + +S ++FK++   SA  I   L GF+T++ G  +LH+ ++ D   I+  +
Sbjct: 300 YYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLPH 359

Query: 306 T 306
           T
Sbjct: 360 T 360

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/292 (46%), Positives = 196/292 (67%), Gaps = 1/292 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGA-RAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           IG  LA +SS  IGSS I+KKKGL +  A GA RA  GG+GYL + +WW G  TM  GE+
Sbjct: 120 IGLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEV 179

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA +VTPLGALS+++SA+L+ + L E L  +G LGC++CV GST++V+HAP
Sbjct: 180 ANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAP 239

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + ++ E+        F+++   ++   L+LI   APRYGQ NILIYI ICSVIG+ 
Sbjct: 240 EEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAF 299

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V +VK +GI IK   +GL   +    +I +++    + TQ+N+LN ALD FNT++V PI
Sbjct: 300 SVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPI 359

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
           YY  FT+  + +S I+FK++   SA  IA  L GF+T++ G  +LH+ ++ D
Sbjct: 360 YYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLD 411

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  256 bits (653), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/292 (48%), Positives = 198/292 (67%), Gaps = 1/292 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LA+ SS FIGSSFI+KKKGL +    G  RAG GG+ YL E LWW G+ +M  GE 
Sbjct: 70  VGLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE+L   G +GC+L V+GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            E  + S+ E+ +    P F+ +   +  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V SVK +GIAIK  LE     K    +I   +    V TQ+NYLN ALDTFNT++V+PI
Sbjct: 250 SVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPI 309

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
           YY  FTS  +  SAI+F+++ G  A  I   L GF T+++G  +LH+ +  +
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNTN 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  241 bits (614), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 147/292 (50%), Positives = 202/292 (69%), Gaps = 1/292 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LAV SS FIGSSFI+KKKGL +  + G  RAG GG+ YL E LWWVG+ +M VGE 
Sbjct: 70  VGLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE L   G +GC+L ++GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + S+ E+ +    P F+ +   V  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V SVK +GIAIK  +E     K    ++   V +  V TQ+NYLN ALDTFNT++V+PI
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPI 309

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
           YY  FTS  +  SAI+F+++ G +A  I   L GF T++ G  +LH+ +  D
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  237 bits (605), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/292 (49%), Positives = 201/292 (68%), Gaps = 1/292 (0%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANG-ARAGSGGYGYLLEPLWWVGMFTMIVGEI 65
           +G +LAV SS FIGSSFI+KKKGL +  + G  RAG GG+ YL E LWWVG+ +M  GE 
Sbjct: 70  VGLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEA 129

Query: 66  ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
           ANF AY +APA LVTPLGALS+++SA+L+ + LNE L   G +GC+L ++GST++V+HAP
Sbjct: 130 ANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
            EE + S+ E+ +    P F+ +   +  ++LVLIL  AP+ GQTNIL+YI ICS+IG+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
           +V SVK +GIAIK  +E     K    ++   V +  V TQ+NYLN ALDTFNT++V+PI
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPI 309

Query: 246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
           YY  FTS  +  SAI+F+++ G +A  I   L GF T++ G  +LH+ +  D
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  196 bits (499), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 170/291 (58%), Gaps = 9/291 (3%)

Query: 7   IGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIA 66
           +G  +AVVSS   GS+F+++KKG+        RA   G  YL + +WW G   M VG+I 
Sbjct: 30  LGLGVAVVSSLVNGSTFVLQKKGI-------VRAKRRGTSYLTDIVWWAGTIAMAVGQIG 82

Query: 67  NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL 126
           NF+AY   P VLVTPLGAL +   ++LA ++L EKL  +G LGCLL   GS ++++H+P 
Sbjct: 83  NFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPK 142

Query: 127 EESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLT 186
            ES+ +  E+    T P F+ Y+  V+ + L+LI + AP +G TNI++YI ICS++GS T
Sbjct: 143 SESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFT 202

Query: 187 VMSVKAIGIAIKLTLEG--LNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSP 244
           V S K IG+A +  L     +Q       +   V    +I Q  Y+N AL+ F+++V   
Sbjct: 203 VPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGA 262

Query: 245 IYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
           IYY +FT+  + ASAI+F+++S           CGF TV  G  ++   +E
Sbjct: 263 IYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 313

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
356516417	345	PREDICTED: magnesium transporter NIPA2-l	1.0	0.994	0.817	1e-162
356508914	344	PREDICTED: magnesium transporter NIPA2-l	1.0	0.997	0.802	1e-160
356512886	344	PREDICTED: magnesium transporter NIPA2-l	1.0	0.997	0.799	1e-159
225460464	347	PREDICTED: magnesium transporter NIPA2 [	0.994	0.982	0.781	1e-153
357520199	345	Magnesium transporter NIPA2 [Medicago tr	1.0	0.994	0.753	1e-149
225438307	360	PREDICTED: magnesium transporter NIPA2 [	0.988	0.941	0.801	1e-149
224056096	311	predicted protein [Populus trichocarpa]	0.871	0.961	0.862	1e-146
125528553	363	hypothetical protein OsI_04623 [Oryza sa	0.997	0.942	0.715	1e-142
115441347	363	Os01g0873700 [Oryza sativa Japonica Grou	0.997	0.942	0.712	1e-142
357126127	359	PREDICTED: magnesium transporter NIPA2-l	0.997	0.952	0.706	1e-142

>gi|356516417|ref|XP_003526891.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 282/345 (81%), Positives = 314/345 (91%), Gaps = 2/345 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+S+NLIGFILAVVSSAFIGSSFIIKKKGL++A  NG+RA  GGYGYLL+PLWW+GM TM
Sbjct: 1   MYSTNLIGFILAVVSSAFIGSSFIIKKKGLQRASLNGSRASGGGYGYLLQPLWWLGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYVYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+ L+SV+EIW LA QPAFLLY  S +AVA  LILYCAPR+GQTNIL+YIGICS
Sbjct: 121 VLHAPQEKPLSSVEEIWQLALQPAFLLYTASTIAVAFFLILYCAPRFGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           +IGSLTVMS+KAIGIAI+LT+EG +Q    +TWIF MVA++C+ITQLNYLNMALDTFNTA
Sbjct: 181 IIGSLTVMSIKAIGIAIRLTIEGADQFVQFQTWIFTMVAISCIITQLNYLNMALDTFNTA 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYA+FTSFTI ASAIMFKDYSGQS SSIASELCGFITVLSGT+VLHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITVLSGTTVLHSTREPDPPV 300

Query: 301 ITDLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMIT-IRPDYFK 343
            TDLY+PLSPKVSWYIQGNGE WK K+EDG   N+IT IR D+FK
Sbjct: 301 NTDLYSPLSPKVSWYIQGNGEPWKQKEEDGPPFNLITVIRQDHFK 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508914|ref|XP_003523198.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/344 (80%), Positives = 309/344 (89%), Gaps = 1/344 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+SSN IGFILAVVSSAFIGSSFIIKKKGL++A  NG+RA  GGYGYLL+PLWW+GM TM
Sbjct: 1   MYSSNFIGFILAVVSSAFIGSSFIIKKKGLQRASLNGSRASGGGYGYLLQPLWWLGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYVYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+SL+SV+EIW LA QPAFL Y  S +AV   LILYCAPR+GQTNIL+YIGICS
Sbjct: 121 VLHAPQEKSLSSVEEIWQLALQPAFLSYTASAIAVVFFLILYCAPRHGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           +IGSLTVMS+KAIGIAI+LT+EG +Q    +TWIF MVA++C++TQLNYLNMALDTFNTA
Sbjct: 181 IIGSLTVMSIKAIGIAIRLTIEGADQFVQFQTWIFTMVAISCIVTQLNYLNMALDTFNTA 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYA+FTSFTI ASAIMFKDY GQS SSIASELCGF+TVLSGT+VLHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYYGQSISSIASELCGFVTVLSGTTVLHSTREPDPPV 300

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMIT-IRPDYFK 343
            TDLY+PLSPKVSWYIQGNGE WK+ ED    N+IT IR D+FK
Sbjct: 301 NTDLYSPLSPKVSWYIQGNGEPWKQKEDAPPFNLITVIRQDHFK 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512886|ref|XP_003525145.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 275/344 (79%), Positives = 306/344 (88%), Gaps = 1/344 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M SSNL GF+LAV+SSAFIGSSFIIKKKGL+ A ANG RA  GGYGYLL+PLWWVGM TM
Sbjct: 1   MSSSNLTGFVLAVLSSAFIGSSFIIKKKGLQLASANGPRASVGGYGYLLQPLWWVGMITM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMGMLGCLLC+VGST+I
Sbjct: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E+SL+SVQEIW LA QPAFL Y  S +AV L L+LYCAPR+GQTNIL+Y GICS
Sbjct: 121 VLHAPEEKSLSSVQEIWELAIQPAFLSYTASAIAVTLFLVLYCAPRHGQTNILVYTGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           ++GSLTVMSVKA+GIAIKLTLEG NQA   + W+FAMV++TC+I QLNYLNMALD FNTA
Sbjct: 181 IVGSLTVMSVKAVGIAIKLTLEGANQAFHFQAWVFAMVSVTCIIVQLNYLNMALDNFNTA 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYA+FTSFTI ASAIMFKDYSGQS SSIASELCGFIT+LSGT++LHSTREPD P+
Sbjct: 241 VVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITILSGTTILHSTREPDPPV 300

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHPNMIT-IRPDYFK 343
           + DLYTPLSPKVSWYIQGN E WK++ED S  N+I  IR D+FK
Sbjct: 301 VADLYTPLSPKVSWYIQGNSEPWKQEEDVSPLNLIAIIRQDHFK 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460464|ref|XP_002272602.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296088673|emb|CBI38123.3| unnamed protein product [Vitis vinifera]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/344 (78%), Positives = 304/344 (88%), Gaps = 3/344 (0%)

Query: 2   FSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMI 61
           FS NL GFILAVVSSAFIGSSFIIKKKGL++A A+G  A SGGYGYLLEPLWW+GM TMI
Sbjct: 5   FSDNLTGFILAVVSSAFIGSSFIIKKKGLQRAAASGPPASSGGYGYLLEPLWWIGMVTMI 64

Query: 62  VGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV 121
           VGEIANFVAYI+APAVLVTPLGALSIIVSAVLAHF+L EKL+KMG+ GC+LC+VGST+IV
Sbjct: 65  VGEIANFVAYIFAPAVLVTPLGALSIIVSAVLAHFLLKEKLRKMGIYGCVLCIVGSTLIV 124

Query: 122 LHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSV 181
           LHAP E SL+SV+EIW LATQPAFLLY  S +AV LVL+LYC PRYGQTNI++YIGICS+
Sbjct: 125 LHAPSEHSLSSVEEIWELATQPAFLLYTASAIAVVLVLVLYCEPRYGQTNIMVYIGICSI 184

Query: 182 IGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAV 241
           IGSLTVMS+KAIGIAIKLTLEG +Q    +TW+FAMVA+TC+ITQLNYLN ALDTFNTAV
Sbjct: 185 IGSLTVMSIKAIGIAIKLTLEGSSQVAHFQTWVFAMVAITCIITQLNYLNKALDTFNTAV 244

Query: 242 VSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLI 301
           VSPIYYA+FTSFTI ASAIMFKD+SGQSASSI S LCGFITVLSGT VLHSTREPD PLI
Sbjct: 245 VSPIYYALFTSFTILASAIMFKDWSGQSASSIVSVLCGFITVLSGTMVLHSTREPDPPLI 304

Query: 302 TDLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMITI-RPDYFK 343
           TD+Y+ L P++SW +Q NG +WK KD+D   P+ ITI R D+FK
Sbjct: 305 TDVYSSL-PQISWLVQVNGNIWKQKDDDEVSPDFITILRQDHFK 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520199|ref|XP_003630388.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355524410|gb|AET04864.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 260/345 (75%), Positives = 297/345 (86%), Gaps = 2/345 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M S+NL GF+LA++SSAFIGSSFIIKKKGL+ A  NG  A  GGYGYLL+PLWWVGM TM
Sbjct: 1   MSSTNLTGFLLALISSAFIGSSFIIKKKGLQLARVNGPSASVGGYGYLLQPLWWVGMVTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEIANFVAY+YAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMGMLGCL+C++GST+I
Sbjct: 61  IVGEIANFVAYMYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLICILGSTII 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E SL+SVQ+IW LA QPAFL+Y  S +A+ L L+LYCAPRYGQ+NIL+YIGICS
Sbjct: 121 VLHAPQEMSLSSVQQIWKLAIQPAFLMYTTSAIAITLFLVLYCAPRYGQSNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           ++GSLTVMSVKAIGIAIKLTLEG NQ    +TW+F MVA+TC+I QLNYLNMALD FNTA
Sbjct: 181 IVGSLTVMSVKAIGIAIKLTLEGANQIFYFQTWVFTMVAITCIIIQLNYLNMALDNFNTA 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYA+FT+FTI ASAIMFKDYSGQS  SI SELCGFIT+LSGT +LH TREPD P+
Sbjct: 241 VVSPIYYALFTAFTILASAIMFKDYSGQSIGSIVSELCGFITILSGTFLLHGTREPDPPV 300

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMIT-IRPDYFK 343
             DLY+PLSP+VSWY QGN E WK+ E+   P N+I  IR D+FK
Sbjct: 301 NPDLYSPLSPRVSWYFQGNNESWKQKEEDVPPFNLIAIIRQDHFK 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438307|ref|XP_002270969.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|296082637|emb|CBI21642.3| unnamed protein product [Vitis vinifera]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/343 (80%), Positives = 306/343 (89%), Gaps = 4/343 (1%)

Query: 3   SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIV 62
           SSN  G +LAVVSSAFIGSSFIIKKKGL+KAGA+G RA  GGYGYLLEPLWW+GM TMIV
Sbjct: 20  SSNFKGVLLAVVSSAFIGSSFIIKKKGLKKAGASGPRASVGGYGYLLEPLWWMGMITMIV 79

Query: 63  GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL 122
           GEIANFVAY++APA LVTPLGALSIIVSAVLAHF+LNEKLQKMGMLGCLLC+VGS +IVL
Sbjct: 80  GEIANFVAYVFAPATLVTPLGALSIIVSAVLAHFLLNEKLQKMGMLGCLLCIVGSVVIVL 139

Query: 123 HAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVI 182
           HA  E SL SV+EIW LA QPAFLLY  S +AV+LVLILYCAPRYGQTNIL+YIGICS+I
Sbjct: 140 HASDESSLASVEEIWELAIQPAFLLYTASAIAVSLVLILYCAPRYGQTNILVYIGICSII 199

Query: 183 GSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVV 242
           GSLTVMS+KA+GIAI+LTLEG NQ K  + W+F MV++TC++TQLNYLNMALDTFNTAVV
Sbjct: 200 GSLTVMSIKAVGIAIELTLEGTNQFKYFQAWVFLMVSVTCIMTQLNYLNMALDTFNTAVV 259

Query: 243 SPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLIT 302
           SPIYYA+FTSFTI AS IMFKD+SG SASSI SELCGFITVLSGT++LHSTREPD P IT
Sbjct: 260 SPIYYALFTSFTILASVIMFKDWSGLSASSIVSELCGFITVLSGTAILHSTREPDPPFIT 319

Query: 303 DLYTPLSPKVSWYIQGNGELWK-KDEDGSHPNMITI-RPDYFK 343
           DLYTPLSPKVSW+IQGNGE+WK KDEDG  P+ + I R DYFK
Sbjct: 320 DLYTPLSPKVSWHIQGNGEIWKPKDEDG--PDFVAILRQDYFK 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056096|ref|XP_002298727.1| predicted protein [Populus trichocarpa] gi|222845985|gb|EEE83532.1| predicted protein [Populus trichocarpa]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/299 (86%), Positives = 281/299 (93%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M+SSNL+GFILA+VSSAFIGSSFIIKKKGLRKAG +G RA SGGYGYLLEPLWW+GM TM
Sbjct: 1   MYSSNLLGFILAMVSSAFIGSSFIIKKKGLRKAGVSGPRASSGGYGYLLEPLWWIGMITM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGEI+NFVAYIYAPAVLVTPLGALSIIVSAVLAHF+L EKLQKMG+LGCLLC+VGST+I
Sbjct: 61  IVGEISNFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGVLGCLLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           VLHAP E S+NSV+EIW LA QPAFLLY  SVVA+ALVLILY +PRYGQTNIL+YIGICS
Sbjct: 121 VLHAPEERSINSVEEIWELAIQPAFLLYTASVVAIALVLILYFSPRYGQTNILVYIGICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           VIGSLTVMS+KAIGIAIKLT+EG+NQAK  +TWIFAMV +TC+ITQLNYLNMALDTFNTA
Sbjct: 181 VIGSLTVMSIKAIGIAIKLTIEGINQAKYFQTWIFAMVVITCIITQLNYLNMALDTFNTA 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTP 299
           VVSPIYYA FTSFTI ASAIMFKDYSGQSASSIASELCGF+TVLSGT+VLHSTREPD P
Sbjct: 241 VVSPIYYAGFTSFTILASAIMFKDYSGQSASSIASELCGFLTVLSGTAVLHSTREPDPP 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125528553|gb|EAY76667.1| hypothetical protein OsI_04623 [Oryza sativa Indica Group]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/344 (71%), Positives = 297/344 (86%), Gaps = 2/344 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAFIG SFI+KKKGL +AGA G+RAG GGYGYLLEPLWWVGM TM
Sbjct: 19  LFAANLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTM 78

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANF+AY++APAVLVTPLGALSIIVSAVLAHF LNEKLQ++G+LGC+LC+VGST+I
Sbjct: 79  LVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGSTVI 138

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV EIW LA QP FL Y  + VAV+L L++YCAPRYGQ NI++Y+GICS
Sbjct: 139 ILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICS 198

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           VIGSLTVMS+KA+GIAIKLT+EG+NQA   +TW+FA++++TC+  QL YLN ALDTFNTA
Sbjct: 199 VIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNTA 258

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYAMFT+ TI ASAIMFKD+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 259 VVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTL 318

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMITI-RPDYF 342
             DLY PL PK+ W+IQGNG++ K+ ED S P ++IT+ R DYF
Sbjct: 319 SADLYAPLPPKIYWHIQGNGDIGKQKEDDSLPCDIITVMRQDYF 362

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115441347|ref|NP_001044953.1| Os01g0873700 [Oryza sativa Japonica Group] gi|56785086|dbj|BAD82725.1| putative NTS2 protein [Oryza sativa Japonica Group] gi|113534484|dbj|BAF06867.1| Os01g0873700 [Oryza sativa Japonica Group] gi|215737176|dbj|BAG96105.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/344 (71%), Positives = 296/344 (86%), Gaps = 2/344 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAFIG SFI+KKKGL +AGA G+RAG GGYGYLLEPLWWVGM TM
Sbjct: 19  LFAANLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTM 78

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANF+AY++APAVLVTPLGALSIIVSAVLAHF LNEKLQ++G+LGC+LC+VGST+I
Sbjct: 79  LVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGSTVI 138

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV EIW LA QP FL Y  + VAV+L L++YCAPRYGQ NI++Y+GICS
Sbjct: 139 ILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICS 198

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           VIGSLTVMS+KA+GIAIKLT+EG+NQA   +TW+FA++++TC+  QL YLN ALDTFN A
Sbjct: 199 VIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAA 258

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           VVSPIYYAMFT+ TI ASAIMFKD+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 259 VVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTL 318

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMITI-RPDYF 342
             DLY PL PK+ W+IQGNG++ K+ ED S P ++IT+ R DYF
Sbjct: 319 SADLYAPLPPKIYWHIQGNGDIGKQKEDDSLPCDIITVMRQDYF 362

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357126127|ref|XP_003564740.1| PREDICTED: magnesium transporter NIPA2-like [Brachypodium distachyon]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/344 (70%), Positives = 297/344 (86%), Gaps = 2/344 (0%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           +F++NL G +LAV SSAF+G SFI+KKKGLR+AG+ G+RAG GGYGYL+EPLWWVGM TM
Sbjct: 15  LFAANLKGALLAVASSAFVGVSFIVKKKGLRRAGSTGSRAGVGGYGYLVEPLWWVGMVTM 74

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           +VGEIANFVAY++APAVLV PLGALSIIVSAVLAHFMLNEKLQ++G+LGC+LC+VGST+I
Sbjct: 75  LVGEIANFVAYMFAPAVLVAPLGALSIIVSAVLAHFMLNEKLQRVGVLGCVLCIVGSTVI 134

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           +LHAP E + +SV++IW LATQP FL Y    VAV+L+L+LYCAPRYGQTNI++Y+GICS
Sbjct: 135 ILHAPQERTPSSVEQIWHLATQPTFLCYAALAVAVSLLLMLYCAPRYGQTNIMVYVGICS 194

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
            IGSLTVMS+KA+GIA+KLT++G+NQA   +TW+F  V+ TC++ QL YLN ALDTFNTA
Sbjct: 195 AIGSLTVMSIKAVGIAVKLTIQGINQAGYFQTWLFVTVSATCLVIQLIYLNKALDTFNTA 254

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL 300
           +VSPIYYAMFT+ TI ASAIMFKD+SGQSAS IASE+CGF+TVL+GT VLHSTREPD  L
Sbjct: 255 LVSPIYYAMFTTLTILASAIMFKDWSGQSASIIASEICGFLTVLAGTVVLHSTREPDQTL 314

Query: 301 ITDLYTPLSPKVSWYIQGNGELWKKDEDGSHP-NMIT-IRPDYF 342
             DLYTPL P + W+IQGNG++ K+ ED S P + IT +R DYF
Sbjct: 315 SGDLYTPLPPTIYWHIQGNGDIGKQKEDDSLPCDFITVVRQDYF 358

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.865	0.911	0.653	1.8e-101
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.865	0.905	0.656	3e-101
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.860	0.801	0.596	2e-95
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.860	0.860	0.589	1.6e-93
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.860	0.880	0.603	2.7e-93
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.860	0.764	0.596	5.5e-93
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.860	0.877	0.6	3e-92
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.857	0.798	0.462	4.3e-70
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.857	0.798	0.462	4.3e-70
FB|FBgn0032451	385	spict "spichthyin" [Drosophila	0.900	0.802	0.440	3.6e-66

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 194/297 (65%), Positives = 231/297 (77%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N +G +LAV SS FIGSSFI+                       LEPLWWVG+ TM
Sbjct:     1 MVSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTM 60

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
               GEIANFVAY+YAPAVLVTPLGALSII+SAVLAHF+L+EKL+KMG+ GC+ C+VGS MI
Sbjct:    61 TFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             V+HAP E++ NSV+EIW LA QPAFL+YV   +++ L LILYC P  GQTNIL+YIGICS
Sbjct:   121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++GSLTVMS+KA+GIAIKLT EG+NQ    ETW FAMVA  CV+ Q+ YLN ALDTFN A
Sbjct:   181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAA 240

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
             +VSPIYY MFT+ TI ASAIMFKD++GQ+  SIASE+CGFITVL+GT +LHSTRE +
Sbjct:   241 IVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEE 297

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 195/297 (65%), Positives = 234/297 (78%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M + N  G ILAV SS FIGSSFI+                       LEPLWW GM TM
Sbjct:     1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTM 60

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGE ANFVAYIYAPAVLVTPLGALSII+SAVLAHF+L EKL+KMG+LGC+ C+VGS +I
Sbjct:    61 IVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVI 120

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             V+HAP E++ NSV+EIW LATQPAFL+YV   +++ L LIL+  P  GQTNIL+YIGICS
Sbjct:   121 VIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICS 180

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++G+LTVMS+KAIGIAIKLT+EG++Q    +TW+F MVA+TCV+TQL YLN ALDTFN A
Sbjct:   181 LMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAA 240

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 297
             +VSP+YY MFT+ TI ASAIMFKD+SGQ A+S+ASELCGFITVL+GT +LH TRE +
Sbjct:   241 IVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEE 297

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 176/295 (59%), Positives = 224/295 (75%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                       LEPLWWVGM TM
Sbjct:    15 MSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII+SA LAH +L+EKL   G+LGC+LCVVGS  I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ ++SV ++W LAT+PAFLLY  +VV  A++LI+   P+YGQ+++++YIG+CS
Sbjct:   135 VLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++GSL+VMSVKA+GIA+KLT  G+NQ    +TW+F ++ LTCVITQ+NYLN ALDTFNTA
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTA 254

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
             VVSPIYY MFTS TI AS IMFKD+  Q  + I +ELCGF+T+LSGT +LH T++
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
 Identities = 174/295 (58%), Positives = 219/295 (74%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                        EPLWW+GM TM
Sbjct:    15 MSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             ++GEIANF AY +APA+LVTPLGA+SII+SAVLAH +L EKL   G+LGC LCVVGST I
Sbjct:    75 LLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E  ++SV E+W LAT+PAF+ Y   V+  A+ LI+   P+YGQTN+++YIGICS
Sbjct:   135 VLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++GSL+VMSVKA+GIA+KLT  G NQ    +TWIF +V LTCV+TQLNYLN ALDTFNTA
Sbjct:   195 LVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTA 254

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
             +VSPIYY MFTS TI AS IMFKD+  Q+ + I +E+CGF+T+LSGT +LH T++
Sbjct:   255 IVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 178/295 (60%), Positives = 215/295 (72%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M   N+ G ILAV SS FIGSSFII                        EP WW GM TM
Sbjct:     4 MSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMITM 63

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGE+ANF AY +APA+LVTPLGALSII SAVLAHF+L EKL   G+LGC+LCVVGST I
Sbjct:    64 IVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGSTTI 123

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV++IW LA +P FL+Y   +V V  +LI Y  PRYG+T++++Y+GICS
Sbjct:   124 VLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICS 183

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++GSLTVMSVKA+ IAIKLT  G NQ K   TWIF +V  TC I Q+NYLN ALDTFNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTA 243

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
             V+SP+YY MFT+FTI AS IMFKD++ QS   IA+ELCGF+T+LSGT +LH T++
Sbjct:   244 VISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKD 298

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
 Identities = 176/295 (59%), Positives = 218/295 (73%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M S N+ G +LA+ SS FIG+SFI+                       LEPLWW+GM TM
Sbjct:    15 MSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITM 74

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII+SA LAH +L EKL   G+LGC LC+VGS  I
Sbjct:    75 IVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTI 134

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV E+W LAT+PAFL Y  +VV  A+VLI+   P YGQ+++++YIG+CS
Sbjct:   135 VLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCS 194

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             +IGSL+VMSVKA+GIA+KLT  G NQ    +TW+F ++ L CVITQ+NYLN ALDTFNTA
Sbjct:   195 LIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTA 254

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
             VVSPIYY MFTS TI AS IMFKD+  QS + I +ELCGF+T+LSGT +LH+T +
Sbjct:   255 VVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
 Identities = 177/295 (60%), Positives = 213/295 (72%)

Query:     1 MFSSNLIGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMFTM 60
             M   N+ G ILAV SS FIGSSFII                        EP WW GM TM
Sbjct:     4 MSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITM 63

Query:    61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
             IVGEIANF AY +APA+LVTPLGALSII SAVLAHF+L EKL   G+LGC+LCVVGST I
Sbjct:    64 IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTI 123

Query:   121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
             VLHAP E+ + SV+++W LAT+P FL Y   V+ V L LI Y  PRYG+T++++Y+GICS
Sbjct:   124 VLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICS 183

Query:   181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
             ++GSLTVMSVKA+ IAIKLT  G+NQ K    WIF +V   C I Q+NYLN ALD FNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTA 243

Query:   241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
             V+SP+YY MFT+FTI AS IMFKD++ QS   IA+ELCGF+T+LSGT +LH T++
Sbjct:   244 VISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKD 298

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 137/296 (46%), Positives = 195/296 (65%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLE-PLWWVGMFTMIVGEI 65
             IG  LA+ SS  IG+SFII                       L+ P+WW GM TM +GEI
Sbjct:     6 IGLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEI 65

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA+LVTPLGALS+I+ AVLA   L E+L  +G +GC +C++GS +I+LHAP
Sbjct:    66 ANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              ++ + +V EI   ATQP F+ Y   V   +L +I    P+YG TN +IY+ ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
             +VMS+KA GIA+KLTL G NQ   + T++F +V   C++TQ+NY N ALD F+T++V+P+
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPL 245

Query:   246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLI 301
             YY  FT+FT+ AS I+FK ++  SA  I S L GF+ + SG  +L+ +R  ++P++
Sbjct:   246 YYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISRS-ESPMV 300

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 137/296 (46%), Positives = 195/296 (65%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXLE-PLWWVGMFTMIVGEI 65
             IG  LA+ SS  IG+SFII                       L+ P+WW GM TM +GEI
Sbjct:     6 IGLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEI 65

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA+LVTPLGALS+I+ AVLA   L E+L  +G +GC +C++GS +I+LHAP
Sbjct:    66 ANFAAYTFAPAILVTPLGALSVIIGAVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              ++ + +V EI   ATQP F+ Y   V   +L +I    P+YG TN +IY+ ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   186 TVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPI 245
             +VMS+KA GIA+KLTL G NQ   + T++F +V   C++TQ+NY N ALD F+T++V+P+
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPL 245

Query:   246 YYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLI 301
             YY  FT+FT+ AS I+FK ++  SA  I S L GF+ + SG  +L+ +R  ++P++
Sbjct:   246 YYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISRS-ESPMV 300

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0032451 spict "spichthyin" [Drosophila melanogaster (taxid:7227)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 138/313 (44%), Positives = 196/313 (62%)

Query:     7 IGFILAVVSSAFIGSSFIIXXXXXXXXXXXXXXXXXXXXXXXL-EPLWWVGMFTMIVGEI 65
             IG  LA+ S  FIGSSFII                       L E +WW G+ TM VGE 
Sbjct:    47 IGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIWWAGLLTMGVGEA 106

Query:    66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP 125
             ANF AY +APA LVTPLGALS+I+SAV+A   LNEKL  +G +GC LC++GST+IV+H+P
Sbjct:   107 ANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCILGSTIIVIHSP 166

Query:   126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSL 185
              E+ +  +Q ++ +   P F+LYV  +V   + +  + APR+G TN+++YI +CS IGSL
Sbjct:   167 KEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFVACFIAPRHGHTNVVVYIFLCSGIGSL 226

Query:   186 TVMSVKAIGIAIKLTLE-GLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSP 244
             TVMS KA+G+AI+ TL  G N       W   +V +T +  Q+NYLN ALD FNT++V+P
Sbjct:   227 TVMSCKALGLAIRQTLNNGGNVFLTWMPWFLILVTVTFIAIQMNYLNKALDIFNTSIVTP 286

Query:   245 IYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPL--IT 302
             +YY MFT+  I ASAI+FK+++      I  ++CGF+ V++   +L++ R+ D  L  + 
Sbjct:   287 VYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFLIVITAVFLLNAFRDIDISLNDVR 346

Query:   303 DLYTPLSPKVSWY 315
              L  P   +VS +
Sbjct:   347 GLMRPKMQRVSQF 359

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IDA

GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.4896	0.8425	0.8027	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.4528	0.9096	0.8666	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.4528	0.9096	0.8666	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4896	0.8425	0.8050	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00001732001 SubName- Full=Chromosome chr18 scaffold_121, whole genome shotgun sequence; (347 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-143
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.003

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  406 bits (1046), Expect = e-143
 Identities = 190/295 (64%), Positives = 229/295 (77%)

Query: 1   MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTM 60
           M + N IG ILAV SS FIGSSFIIKKKGL +    G RAG GGYGYL E LWW G+ TM
Sbjct: 1   MNTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTM 60

Query: 61  IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI 120
           IVGE ANF AY +APA LVTPLGALS+I+SAVL+ F LNEKL   G LGC+LC+VGST+I
Sbjct: 61  IVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVI 120

Query: 121 VLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICS 180
           V+HAP E+ + SV+E+W LAT P FL+YV  VV V L+LI +  PR+GQTNIL+YI ICS
Sbjct: 121 VIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICS 180

Query: 181 VIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA 240
           +IGSLTVMSVKA+GIAIKLT  G NQ    + WIF +V +TCV+TQ+NYLN ALD FNT+
Sbjct: 181 LIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTS 240

Query: 241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 295
           +V+P+YY  FT+  I ASAI+FK++ GQS   IA ELCGF T+L GT +LH+TR+
Sbjct: 241 IVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRD 295

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 53  WWVGMFTMIVGEIANFVAYIYAPAVL---VTPLGALSIIVSAVLAHFMLNEKLQKMGMLG 109
           W   +   ++G    +     A       V  + AL+ + +A+L   +  ++L K  +L 
Sbjct: 34  WLWLILAGLIG-FLFYALLCLALQYGPGWVVAITALTPVFAALLGRLLFKQRLPKRELLA 92

Query: 110 CLLCVVGSTMIVLHAPLEES 129
             + + G  ++ +      S
Sbjct: 93  SAIILAGVVLMQVTEATGLS 112

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.22
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.92
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.87
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.76
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.76
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.75
PRK15430	296	putative chloramphenical resistance permease RarD;	98.73
PRK11272	292	putative DMT superfamily transporter inner membran	98.71
PLN00411	358	nodulin MtN21 family protein; Provisional	98.67
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.62
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.61
PRK11689	295	aromatic amino acid exporter; Provisional	98.54
COG2510	140	Predicted membrane protein [Function unknown]	98.5
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.48
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.43
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.42
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.29
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.28
PRK13499	345	rhamnose-proton symporter; Provisional	98.19
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.18
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.13
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.98
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.69
PLN00411	358	nodulin MtN21 family protein; Provisional	97.63
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.57
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.55
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.48
PRK11272	292	putative DMT superfamily transporter inner membran	97.44
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.44
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.42
PRK11689	295	aromatic amino acid exporter; Provisional	97.32
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.25
COG2510	140	Predicted membrane protein [Function unknown]	97.23
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.0
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.93
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.76
PRK11431	105	multidrug efflux system protein; Provisional	96.58
COG2076	106	EmrE Membrane transporters of cations and cationic	96.33
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.29
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.24
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.13
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.9
PRK11431	105	multidrug efflux system protein; Provisional	95.88
PRK15430	296	putative chloramphenical resistance permease RarD;	95.79
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.48
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.43
KOG2765	416	consensus Predicted membrane protein [Function unk	95.4
COG2962	293	RarD Predicted permeases [General function predict	95.31
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.28
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.2
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	94.64
KOG3912	372	consensus Predicted integral membrane protein [Gen	94.1
COG2076	106	EmrE Membrane transporters of cations and cationic	93.56
PF13536	113	EmrE: Multidrug resistance efflux transporter	93.18
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	92.5
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	92.26
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	92.22
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.14
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	91.87
COG1742	109	Uncharacterized conserved protein [Function unknow	91.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	90.99
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.71
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	89.84
PRK02237	109	hypothetical protein; Provisional	88.28
KOG4831	125	consensus Unnamed protein [Function unknown]	88.24
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	86.11
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	84.79
KOG1580	337	consensus UDP-galactose transporter related protei	81.66
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.7

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.9e-77  Score=565.61  Aligned_cols=298  Identities=66%  Similarity=1.116  Sum_probs=293.9

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q 019292            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVT   80 (343)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~   80 (343)
                      |++||++|+++|+.||++++.++++|||+++|+++.+.|++.++++|+++|+||+|++.|++||++||+||+|||+++|+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLVt   94 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLVT   94 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhhc
Confidence            68999999999999999999999999999999998888999899999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 019292           81 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLI  160 (343)
Q Consensus        81 Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li  160 (343)
                      |||+++++.|+++|+++||||++..+.+||++|++|++++|.|+|+|++..|++|+|+++++|+|++|+.+.++++++++
T Consensus        95 PLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~  174 (335)
T KOG2922|consen   95 PLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILI  174 (335)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcc
Q 019292          161 LYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA  240 (343)
Q Consensus       161 ~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~  240 (343)
                      ++++||+|++|+++|+.+|+++|++||+++|++++++|++++|++|+.||+||+++++++.|+.+|++||||||+.||++
T Consensus       175 ~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fnts  254 (335)
T KOG2922|consen  175 FFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTS  254 (335)
T ss_pred             eeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 019292          241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDT  298 (343)
Q Consensus       241 ~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~~~~  298 (343)
                      +|.|+||++||+++|++|.|+|+||++++..++.+++||+.+++.|+++|+++||.+.
T Consensus       255 lV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  255 IVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI  312 (335)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence            9999999999999999999999999999999999999999999999999999999988

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=3.4e-70  Score=524.86  Aligned_cols=298  Identities=46%  Similarity=0.805  Sum_probs=288.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q 019292            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVT   80 (343)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~   80 (343)
                      |.+|+++|+.+|++||+++++|+++|||+++|+++++.|++.++++|++||+||+|+++|++|+++|++||+|||+++||
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~   80 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVA   80 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHH
Confidence            67899999999999999999999999999999987666665567899999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHH
Q 019292           81 PLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLI  160 (343)
Q Consensus        81 Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li  160 (343)
                      |+|++++++|++++++++|||++++|+.|+++|+.|+++++.++|++++.++++|+++++++|+|+.|+.+..++.+.++
T Consensus        81 Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~  160 (300)
T PF05653_consen   81 PLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILI  160 (300)
T ss_pred             HHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888888


Q ss_pred             HHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcc
Q 019292          161 LYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTA  240 (343)
Q Consensus       161 ~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~  240 (343)
                      ++.+||+|++++++|.++||++|++|++++|++++.++++++|+|||.||.+|++++++++|++.|++||||||++||++
T Consensus       161 ~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~  240 (300)
T PF05653_consen  161 FFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTS  240 (300)
T ss_pred             HhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccce
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 019292          241 VVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDT  298 (343)
Q Consensus       241 ~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~~~~  298 (343)
                      +|+|+||++||++++++|+++||||+++++++++++.+|+++++.||++|+++||.++
T Consensus       241 ~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  241 LVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             EEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence            9999999999999999999999999999999999999999999999999999999886

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.22  E-value=3.3e-09  Score=100.74  Aligned_cols=254  Identities=18%  Similarity=0.167  Sum_probs=145.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhcc-CC-----------C----CCCCCCcccccchhHH---HHHHHHHHHHHHHH
Q 019292            8 GFILAVVSSAFIGSSFIIKKKGLRKAGA-NG-----------A----RAGSGGYGYLLEPLWW---VGMFTMIVGEIANF   68 (343)
Q Consensus         8 Gv~LAl~ss~~~a~g~vlqk~~~~~~~~-~~-----------~----r~~~~~~~~l~~p~W~---~G~~~~~~g~i~~~   68 (343)
                      .+.+.+.++++.+...++.||..+++.. ..           +    +.....++..++..|+   .+.........+..
T Consensus         2 ~~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLA   81 (281)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999965443221 00           0    0000011111222221   22333456667788


Q ss_pred             HHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHHHhcChhHHHH
Q 019292           69 VAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLY  148 (343)
Q Consensus        69 ~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~~~~~p~fl~y  148 (343)
                      .++..+|.+.++|+...+.++..+++.+++|||+++++|.|++++..|+.++..  ++.++ .+.         .+. .+
T Consensus        82 ~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~~---------~g~-~~  148 (281)
T TIGR03340        82 QAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HRR---------KAY-AW  148 (281)
T ss_pred             HHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cch---------hHH-HH
Confidence            899999999999999999999999999999999999999999999999987643  22111 111         111 11


Q ss_pred             HHHHHHHHHHHHHH-hcccCCCc-----chhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccc-cchhHHHHHHHHHHH
Q 019292          149 VGSVVAVALVLILY-CAPRYGQT-----NILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQ-AKCIETWIFAMVALT  221 (343)
Q Consensus       149 ~~v~~~~~~~Li~~-~~~r~g~~-----~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~-~~~~~~y~~l~~~~~  221 (343)
                      ...  ...+...+. ..++..++     ....+...+.++++.-.....     .  ..++... ...+..+.++.....
T Consensus       149 ~l~--aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~  219 (281)
T TIGR03340       149 ALA--AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-----L--KRHGRSMFPYARQILPSATLGGL  219 (281)
T ss_pred             HHH--HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-----H--HHhccchhhhHHHHHHHHHHHHH
Confidence            111  111111121 22222111     111222222222211111000     0  0111111 112222333333334


Q ss_pred             HHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhc
Q 019292          222 CVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVL  290 (343)
Q Consensus       222 ~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (343)
                      +........++++++.+++.+.+..|. .++++++.|.++++|..+  +.    ...|..+++.|++++
T Consensus       220 ~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~--~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       220 MIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY--LT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc--HH----HHHHHHHHHHhHHhC
Confidence            444445578899999999999999877 488999999999999543  33    446777788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.92  E-value=1.7e-07  Score=89.90  Aligned_cols=259  Identities=16%  Similarity=0.199  Sum_probs=139.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCC---CCCcccc---cch---hHHHHHHHHHHHHHHHHHHHhh-cch
Q 019292           10 ILAVVSSAFIGSSFIIKKKGLRKAGAN---GARAG---SGGYGYL---LEP---LWWVGMFTMIVGEIANFVAYIY-APA   76 (343)
Q Consensus        10 ~LAl~ss~~~a~g~vlqk~~~~~~~~~---~~r~~---~~~~~~l---~~p---~W~~G~~~~~~g~i~~~~Al~~-ap~   76 (343)
                      .+++.+.++-+..++..|.+..+.+..   ..|..   .....+.   +++   .-..|+........+.+.++.+ .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            457777888888888888765432210   11210   0000000   111   1112332222333455666666 477


Q ss_pred             hhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCC-HHHHHHHhcChhHHHHHHHHHH-
Q 019292           77 VLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNS-VQEIWVLATQPAFLLYVGSVVA-  154 (343)
Q Consensus        77 slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s-~~el~~~~~~p~fl~y~~v~~~-  154 (343)
                      ....-+.+...++..+++++++|||++++++.|+++.++|+.++.... .++...+ ..++           +.....+ 
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~-~~~~~~~~~G~~-----------l~l~aal~  154 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDS-LNGQHVAMLGFM-----------LTLAAAFS  154 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcccc-CCCcchhHHHHH-----------HHHHHHHH
Confidence            777778888899999999999999999999999999999987765321 1111111 1111           1111111 


Q ss_pred             HHH--HHHHHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCcc------ccchhHHH-HHHHHHHHHHHH
Q 019292          155 VAL--VLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLN------QAKCIETW-IFAMVALTCVIT  225 (343)
Q Consensus       155 ~~~--~Li~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~------~~~~~~~y-~~l~~~~~~~l~  225 (343)
                      ..+  ++.-+..++.+......+.....++++.-...   .+.    ..++.+      ...++..| .++...+.+...
T Consensus       155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~  227 (299)
T PRK11453        155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFV---ASL----ILDGSATMIHSLVTIDMTTILSLMYLAFVATIV  227 (299)
T ss_pred             HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHH---HHH----HhcCchhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence            111  11111111111111122221222222211110   000    011111      11233333 334444566777


Q ss_pred             HHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccC
Q 019292          226 QLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTR  294 (343)
Q Consensus       226 Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~  294 (343)
                      +....++++++.++..+.++. ...++++++.|.++++|.-  ++.    ...|.++++.|+++....+
T Consensus       228 ~~~l~~~~l~~~~a~~~s~~~-~l~Pv~a~~~~~l~lgE~~--~~~----~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        228 GYGIWGTLLGRYETWRVAPLS-LLVPVVGLASAALLLDERL--TGL----QFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHHHHhCCCc--cHH----HHHHHHHHHHHHHHHhcch
Confidence            788899999999998777754 5789999999999999953  344    3577778888888765433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.87  E-value=5.2e-07  Score=83.75  Aligned_cols=203  Identities=15%  Similarity=0.121  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCH
Q 019292           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSV  133 (343)
Q Consensus        54 ~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~  133 (343)
                      ..|.+...+...+.+.|+.+.|.+.++++..+..+++.+++.+++|||++++++.|+.++++|+.++...+  +.+. +.
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~~  127 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-NP  127 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-cH
Confidence            44555667888889999999999999999999999999999999999999999999999999998765322  1111 10


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHHH-hccc----CCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccccc
Q 019292          134 QEIWVLATQPAFLLYVGSVVAVALVLILY-CAPR----YGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAK  208 (343)
Q Consensus       134 ~el~~~~~~p~fl~y~~v~~~~~~~Li~~-~~~r----~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~  208 (343)
                               .+.+ +.....  ++.-.+. ..++    .+......+. ....+++.. +..-       ....+.+...
T Consensus       128 ---------~G~~-~~l~a~--~~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~-l~~~-------~~~~~~~~~~  186 (260)
T TIGR00950       128 ---------AGLL-LGLGSG--ISFALGTVLYKRLVKKEGPELLQFTG-WVLLLGALL-LLPF-------AWFLGPNPQA  186 (260)
T ss_pred             ---------HHHH-HHHHHH--HHHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHHH-HHHH-------HHhcCCCCCc
Confidence                     1111 111111  1111111 1111    1111112221 111122111 1111       1112222222


Q ss_pred             hhHHHHH-HHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhh
Q 019292          209 CIETWIF-AMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGT  287 (343)
Q Consensus       209 ~~~~y~~-l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV  287 (343)
                      ++..|.. +...+.+........++++++.++..+..+.+ ..+..+++.+.++++|.  .++.+    ..|.++++.|+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~--~~~~~----~~G~~li~~g~  259 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGET--LSLPQ----LIGGALIIAAV  259 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHhc
Confidence            4445532 33333344444446689999999888777765 78888999999999994  34544    45555666664

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.76  E-value=1.6e-06  Score=83.29  Aligned_cols=224  Identities=11%  Similarity=0.175  Sum_probs=140.2

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcchh-hHHHHHHHHHHHHhccccccch----hhhHHHHhhhheeeE
Q 019292           50 EPLWWVGMFT---MIVGEIANFVAYIYAPAVLVTPLGA-LSIIVSAVLAHFMLNEKLQKMG----MLGCLLCVVGSTMIV  121 (343)
Q Consensus        50 ~p~W~~G~~~---~~~g~i~~~~Al~~ap~slV~Plga-~~lv~~~~la~~~l~e~~~~~~----~~G~~lii~G~~~vv  121 (343)
                      ...|..|++.   ...|++..+.|.....+++-.|+.. ++++++.+.+.+++||+.++++    +.|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            4556668877   8899999999999999999999999 9999999999999999999999    999999999988876


Q ss_pred             eecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhccc---CCCcchhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 019292          122 LHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPR---YGQTNILIYIGICSVIGSLTVMSVKAIGIAIK  198 (343)
Q Consensus       122 ~~ap~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~~r---~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~  198 (343)
                      ...+++.+   .++...   .+.=+.+..+..+  ....+...+|   ++.......-..+=++++. ++...-.    +
T Consensus       136 ~~~~~~~~---~~~~~~---~~~Gi~~~l~sg~--~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~----~  202 (290)
T TIGR00776       136 RSKDKSAG---IKSEFN---FKKGILLLLMSTI--GYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGI-IFNLGHI----L  202 (290)
T ss_pred             eccccccc---cccccc---hhhHHHHHHHHHH--HHHHHHHHHHHcCCCcceehhHHHHHHHHHHH-HHHHHHh----c
Confidence            55322221   011000   0111222222211  1111112222   2221111112222223333 2222210    1


Q ss_pred             HHhcCccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHH
Q 019292          199 LTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELC  278 (343)
Q Consensus       199 ~~~~g~~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~  278 (343)
                         .  ........|..++..+.. ..+..+...++++.......++.....++.+.+.|+.+++|..  ++.++....+
T Consensus       203 ---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~i  274 (290)
T TIGR00776       203 ---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAISV  274 (290)
T ss_pred             ---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhHH
Confidence               1  112222333333344443 5555566677775555566677777779999999999999964  5788999999


Q ss_pred             HHHHHHHhhhhccccC
Q 019292          279 GFITVLSGTSVLHSTR  294 (343)
Q Consensus       279 G~~~ii~GV~lLs~~~  294 (343)
                      |+++++.|+.+.+..|
T Consensus       275 G~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       275 GIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHHHHHHHhccC
Confidence            9999999999987554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.76  E-value=3.5e-08  Score=84.17  Aligned_cols=115  Identities=17%  Similarity=0.155  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCC--Ccccccch--hHHHHHHHHHHHHHHHHHHHhhcchhhhhcc
Q 019292            7 IGFILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSG--GYGYLLEP--LWWVGMFTMIVGEIANFVAYIYAPAVLVTPL   82 (343)
Q Consensus         7 iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~--~~~~l~~p--~W~~G~~~~~~g~i~~~~Al~~ap~slV~Pl   82 (343)
                      +|.++.+.+.++.+.|.++-|+|.++.++.+.... .  ......+|  .-+.|+.+++++...+..++...|++...|+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~   80 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPL   80 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence            47788999999999999999999887653211100 0  01223467  6789999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHH--HhccccccchhhhHHHHhhhheeeEe
Q 019292           83 GALSIIVSAVLAHF--MLNEKLQKMGMLGCLLCVVGSTMIVL  122 (343)
Q Consensus        83 ga~~lv~~~~la~~--~l~e~~~~~~~~G~~lii~G~~~vv~  122 (343)
                      -+...++..+.+..  ++||+++.++++|++++++|+.++..
T Consensus        81 ~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         81 LSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            99998888888885  79999999999999999999987643

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.75  E-value=6.2e-06  Score=80.93  Aligned_cols=232  Identities=15%  Similarity=0.226  Sum_probs=129.8

Q ss_pred             ccccchhHHHHHH--HHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEee
Q 019292           46 GYLLEPLWWVGMF--TMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (343)
Q Consensus        46 ~~l~~p~W~~G~~--~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~  123 (343)
                      ..+++|+|.-=++  +.+.|+-....||.+-+.+-+|=|...+++++++++.++||||.++.+++|+++|+.|+++++..
T Consensus        73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            3355666643332  35677888889999999999999999999999999999999999999999999999999877654


Q ss_pred             cCCccCc--CCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHh--cccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 019292          124 APLEESL--NSVQEIWVLATQPAFLLYVGSVVAVALVLILYC--APRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKL  199 (343)
Q Consensus       124 ap~~~~~--~s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~--~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~  199 (343)
                      .-..++.  ...+.+.-    . .+    +....++..+..+  .+.-++.+...+.+.-|++|..- .......  + +
T Consensus       153 D~~~~~~~~~~~~~i~G----D-ll----~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii-~~iq~~i--l-e  219 (334)
T PF06027_consen  153 DVLSGSDSSSGSNPILG----D-LL----ALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFII-SGIQLAI--L-E  219 (334)
T ss_pred             cccccccCCCCCccchh----H-HH----HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH-HHHHHHh--e-e
Confidence            3221111  01111110    0 01    0111111111111  11112223344444445544431 1111111  1 0


Q ss_pred             HhcCcccc-chhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHH
Q 019292          200 TLEGLNQA-KCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELC  278 (343)
Q Consensus       200 ~~~g~~~~-~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~  278 (343)
                       .++-..+ -+++...+.+.-..|...=-...+-.++..+++.+.--. ..-..-+++.++.+|++.  .++    ....
T Consensus       220 -~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~f~~~--~~~----ly~~  291 (334)
T PF06027_consen  220 -RSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFFFGYK--FSW----LYIL  291 (334)
T ss_pred             -hhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHhcCcc--ccH----HHHH
Confidence             0111111 133444433333333332222345566777776444433 344455888899999983  333    3668


Q ss_pred             HHHHHHHhhhhccccCCCCC
Q 019292          279 GFITVLSGTSVLHSTREPDT  298 (343)
Q Consensus       279 G~~~ii~GV~lLs~~~~~~~  298 (343)
                      |+++++.|+++.+..++++.
T Consensus       292 af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  292 AFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             HHHHHHHHhheEEccCCccc
Confidence            88899999999876655443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.73  E-value=1.6e-06  Score=83.03  Aligned_cols=233  Identities=12%  Similarity=0.052  Sum_probs=135.3

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-C--CCC---------------CC-CCCcccccchhHH----HHHH
Q 019292            2 FSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGA-N--GAR---------------AG-SGGYGYLLEPLWW----VGMF   58 (343)
Q Consensus         2 ~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~-~--~~r---------------~~-~~~~~~l~~p~W~----~G~~   58 (343)
                      |+++..|..+++.++++.+...+.-|.. .+.+. .  ..|               .. ...++..++++++    .|..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            6788899999999999999998887753 11110 0  000               00 0000111223322    4555


Q ss_pred             HHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHH
Q 019292           59 TMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWV  138 (343)
Q Consensus        59 ~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~  138 (343)
                      ...+...+.+.++...|.+...-+.....++..+++.+++|||+++++|.|+++..+|++++..  +.. + .   +++ 
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~--~~~-~-~---~~~-  153 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW--TFG-S-L---PII-  153 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH--HcC-C-c---cHH-
Confidence            5667888999999999999999999999999999999999999999999999999999987642  211 1 0   010 


Q ss_pred             HhcChhHHHHHHHHHHHHHHHHHH-hcccCCCcc-h--hHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCcccc--chhHH
Q 019292          139 LATQPAFLLYVGSVVAVALVLILY-CAPRYGQTN-I--LIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQA--KCIET  212 (343)
Q Consensus       139 ~~~~p~fl~y~~v~~~~~~~Li~~-~~~r~g~~~-~--l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~--~~~~~  212 (343)
                             .    + ........+. ..+|..++. .  +........++...         .+.....+..+.  ..+..
T Consensus       154 -------~----l-~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  212 (296)
T PRK15430        154 -------A----L-GLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY---------LFAIADSSTSHMGQNPMSL  212 (296)
T ss_pred             -------H----H-HHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH---------HHHHccCCcccccCCcHHH
Confidence                   0    0 0111111111 233322111 1  11000011111110         000001111111  11222


Q ss_pred             HHHHH-HHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhcccc
Q 019292          213 WIFAM-VALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYS  266 (343)
Q Consensus       213 y~~l~-~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~  266 (343)
                      +..+. ..+.+.+.|. ..|+++++.+++.+.+..| ..++.+++.|..+++|.-
T Consensus       213 ~~~~~~~g~~t~i~~~-~~~~a~~~~~a~~~s~~~~-l~Pv~a~~~g~l~l~E~~  265 (296)
T PRK15430        213 NLLLIAAGIVTTVPLL-CFTAAATRLRLSTLGFFQY-IGPTLMFLLAVTFYGEKP  265 (296)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHhcCCHHHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence            22222 2334455555 8999999999988777765 578889999999999953

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.71  E-value=1.9e-06  Score=82.39  Aligned_cols=212  Identities=10%  Similarity=0.063  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCH
Q 019292           55 VGMFTMIVGEIANFVAY-IYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSV  133 (343)
Q Consensus        55 ~G~~~~~~g~i~~~~Al-~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~  133 (343)
                      .|......+..+.+.+. ...|....+-+-.+..++..+++++ +|||+++++|.|.++..+|+.++..  +++.+....
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~~  150 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--CcccccchH
Confidence            34444445566667777 8888888888999999999999985 7999999999999999999876532  211111111


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCc-cccchhHH
Q 019292          134 QEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGL-NQAKCIET  212 (343)
Q Consensus       134 ~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~-~~~~~~~~  212 (343)
                      .+++-           ..... .-.......+|..++.........-.+++.....   ...    ..++. ....++..
T Consensus       151 G~l~~-----------l~a~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~  211 (292)
T PRK11272        151 GAILI-----------LIASA-SWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLI---ASL----LSGERLTALPTLSG  211 (292)
T ss_pred             HHHHH-----------HHHHH-HHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH---HHH----HcCCcccccCCHHH
Confidence            12111           11111 0011011233333322211111111222221111   000    01111 12224444


Q ss_pred             HHH-HHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhcc
Q 019292          213 WIF-AMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLH  291 (343)
Q Consensus       213 y~~-l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs  291 (343)
                      |.. +...+.+........|+++++.+++.+... ....+..+.+.|.++++|.  .++.    ...|.++++.|+++++
T Consensus       212 ~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~--~t~~----~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        212 FLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGET--LSPI----EWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCC--CcHH----HHHHHHHHHHHHHHHH
Confidence            433 333334455566688899999988777666 5678889999999999995  3444    4577788999999887


Q ss_pred             ccCC
Q 019292          292 STRE  295 (343)
Q Consensus       292 ~~~~  295 (343)
                      ..+.
T Consensus       285 ~~~~  288 (292)
T PRK11272        285 LGKY  288 (292)
T ss_pred             HHHh
Confidence            6543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.67  E-value=4.4e-06  Score=82.79  Aligned_cols=220  Identities=10%  Similarity=0.148  Sum_probs=117.4

Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHH------hccccccchhhhHHHHhhhheeeEeecCCc------cCc
Q 019292           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFM------LNEKLQKMGMLGCLLCVVGSTMIVLHAPLE------ESL  130 (343)
Q Consensus        63 g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~------l~e~~~~~~~~G~~lii~G~~~vv~~ap~~------~~~  130 (343)
                      .....+.++.+.|++...=+.....++++++++++      +|||+++++++|++++.+|+.++.......      ++.
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            34467889999999999999999999999999999      699999999999999999997665422210      000


Q ss_pred             CCHHHHH--HHhcChhHHHHHHHHH-HHHHHHHH-HhcccCCCc--chhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCc
Q 019292          131 NSVQEIW--VLATQPAFLLYVGSVV-AVALVLIL-YCAPRYGQT--NILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGL  204 (343)
Q Consensus       131 ~s~~el~--~~~~~p~fl~y~~v~~-~~~~~Li~-~~~~r~g~~--~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~  204 (343)
                      .+..+..  ........+.-....+ ..++.-++ ...+|..++  ....+....+++++.-....   +. .   .++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~---~l-~---~~~~  243 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMI---GL-V---VEKN  243 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHH---HH-H---HccC
Confidence            0000000  0000000010001111 11111111 112221111  11222222223332221111   10 1   1211


Q ss_pred             --cc-cchh--HHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHH
Q 019292          205 --NQ-AKCI--ETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCG  279 (343)
Q Consensus       205 --~~-~~~~--~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G  279 (343)
                        .. ...|  ..+.++...+.+.+ -....|+++++-+++.+.. +.-.-++++++.|.++++|..  ++.    .++|
T Consensus       244 ~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~as~-~~~L~PV~a~llg~l~LgE~l--t~~----~~iG  315 (358)
T PLN00411        244 NPSVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYLAI-FKPLSILIAVVMGAIFLNDSL--YLG----CLIG  315 (358)
T ss_pred             CcccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHHHH-HHhHHHHHHHHHHHHHhCCCC--cHH----HHHH
Confidence              11 1111  22222222222333 3336899999988876544 445678899999999999953  444    3478


Q ss_pred             HHHHHHhhhhccccCCCC
Q 019292          280 FITVLSGTSVLHSTREPD  297 (343)
Q Consensus       280 ~~~ii~GV~lLs~~~~~~  297 (343)
                      .++++.|+.+..+.+.+|
T Consensus       316 ~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        316 GILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhhhhhh
Confidence            888999999887654443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.62  E-value=2e-05  Score=75.43  Aligned_cols=257  Identities=14%  Similarity=0.104  Sum_probs=139.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCC--CC--------CCcccccchhH----HHHHHHHHHHHHH
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN---GARA--GS--------GGYGYLLEPLW----WVGMFTMIVGEIA   66 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~---~~r~--~~--------~~~~~l~~p~W----~~G~~~~~~g~i~   66 (343)
                      |...|+.+.+.+.++.+.+.+.-|.+....+..   ..|.  +.        ..+...+++.|    +.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            457789999999999999999999865432210   0010  00        00011122233    45543 4566677


Q ss_pred             HHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHHHhcChhHH
Q 019292           67 NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFL  146 (343)
Q Consensus        67 ~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~~~~~p~fl  146 (343)
                      .+.++.+.|.+...-+.....++..++++    ||.+  ++.+..+++.|+.+++..+.+.++......++-        
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~--------  153 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALA--------  153 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCcccCChHHHHHH--------
Confidence            88899999999887777777777777663    5544  455677778888776533222111111111111        


Q ss_pred             HHHHHHHHHHHHHHH-HhcccCCCc-chhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccccchhHHHHH-HHHHHHHH
Q 019292          147 LYVGSVVAVALVLIL-YCAPRYGQT-NILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIF-AMVALTCV  223 (343)
Q Consensus       147 ~y~~v~~~~~~~Li~-~~~~r~g~~-~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~-l~~~~~~~  223 (343)
                           ....+....+ ...++..++ ..... ....++++.-...   ..     ...+.....++..|.. +...+.+.
T Consensus       154 -----l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~---~~-----~~~~~~~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        154 -----LGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVP---IG-----ALQAGEALWHWSILPLGLAVAILST  219 (293)
T ss_pred             -----HHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHH---HH-----HHccCcccCCHHHHHHHHHHHHHHH
Confidence                 1111111111 112222111 11111 2223333221110   11     0111122234555533 34555667


Q ss_pred             HHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCCC
Q 019292          224 ITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREP  296 (343)
Q Consensus       224 l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~~  296 (343)
                      ..+....|+++++-+++.+.+.. ...++++++.|.++++|.  .++.+    ..|.++++.|++...+.+.+
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~-~l~Pv~a~l~~~l~lgE~--~~~~~----~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLM-SMEPALAAVSGMIFLGET--LTLIQ----WLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHH-HhHHHHHHHHHHHHhCCC--CcHHH----HHHHHHHHHHHHHHHhcCCC
Confidence            77888889999999998776664 678899999999999995  34543    45666677777766555433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.61  E-value=3.4e-06  Score=80.83  Aligned_cols=224  Identities=16%  Similarity=0.131  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCH
Q 019292           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSV  133 (343)
Q Consensus        54 ~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~  133 (343)
                      ..|+. +.+...++..++.+.+++..+=+-+...+++++++++++|||++++.+.|.+++++|+.+..   ..+.+....
T Consensus        70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~~~~  145 (302)
T TIGR00817        70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSFNWA  145 (302)
T ss_pred             HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccccHH
Confidence            34555 46777789999999999999999999999999999999999999999999999999997542   222211111


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHH--Hhcc--cCCCcchhHHHHHHHhhhHHHHHH-HHHHHHHHHHHhcCccccc
Q 019292          134 QEIWVLATQPAFLLYVGSVVAVALVLIL--YCAP--RYGQTNILIYIGICSVIGSLTVMS-VKAIGIAIKLTLEGLNQAK  208 (343)
Q Consensus       134 ~el~~~~~~p~fl~y~~v~~~~~~~Li~--~~~~--r~g~~~~l~y~~i~gllg~~tvl~-~K~v~~~l~~~~~g~~~~~  208 (343)
                      .+++.          ........+..++  +..+  ++.......|....+.+.-.-... ............+......
T Consensus       146 G~~~~----------l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~  215 (302)
T TIGR00817       146 GFLSA----------MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVN  215 (302)
T ss_pred             HHHHH----------HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccC
Confidence            11111          0011111111110  1111  222223344443322211110100 0000000000000000000


Q ss_pred             hhHHHHHH-HHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhh
Q 019292          209 CIETWIFA-MVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGT  287 (343)
Q Consensus       209 ~~~~y~~l-~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV  287 (343)
                      ....|... .....+.......-+.++++-+++...-. ..+-++++++.|.++++|.  .++.    ..+|.++++.|+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~--lt~~----~~~G~~lil~Gv  288 (302)
T TIGR00817       216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTK--ISPQ----QVFGTGIAIAGV  288 (302)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCC--Cchh----HHHHHHHHHHHH
Confidence            01123212 22222322222233457887776554444 6677888999999999994  4454    346777899999


Q ss_pred             hhccccCCCCC
Q 019292          288 SVLHSTREPDT  298 (343)
Q Consensus       288 ~lLs~~~~~~~  298 (343)
                      ++-++.|..++
T Consensus       289 ~l~~~~k~~~~  299 (302)
T TIGR00817       289 FLYSRVKAQKP  299 (302)
T ss_pred             HHHHHHhccCc
Confidence            99887766554

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.54  E-value=1.6e-05  Score=76.15  Aligned_cols=260  Identities=13%  Similarity=0.097  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCCC--------CCcccccc---hhHHHHHHHHHHHHHHHHHHHhh
Q 019292            8 GFILAVVSSAFIGSSFIIKKKGLRKAGAN---GARAGS--------GGYGYLLE---PLWWVGMFTMIVGEIANFVAYIY   73 (343)
Q Consensus         8 Gv~LAl~ss~~~a~g~vlqk~~~~~~~~~---~~r~~~--------~~~~~l~~---p~W~~G~~~~~~g~i~~~~Al~~   73 (343)
                      +..+++.+.++-+..+...|.+....+.-   ..|-..        ..++..++   +....|.+.+.....+.+.++.+
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            45667777888888888888765432210   011000        00011111   12223333333444455555544


Q ss_pred             ----cchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcCCHHHHHHHh-cChhHHHH
Q 019292           74 ----APAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLA-TQPAFLLY  148 (343)
Q Consensus        74 ----ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~~el~~~~-~~p~fl~y  148 (343)
                          .|.+...-+..+..++..+++++++|||++++++.|+++...|++++....+.    .+.++.+... .++  ..+
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~----~~~~~~~~~~~~~~--~G~  158 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNG----LSLAELINNIASNP--LSY  158 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCcc----chhhhhhhccccCh--HHH
Confidence                35555566778889999999999999999999999999999999877643211    0111110000 001  111


Q ss_pred             HHHHHHHHHHHHH-HhcccCCC-cchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCc-cccchhHHHHHHHHHHHHHHH
Q 019292          149 VGSVVAVALVLIL-YCAPRYGQ-TNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGL-NQAKCIETWIFAMVALTCVIT  225 (343)
Q Consensus       149 ~~v~~~~~~~Li~-~~~~r~g~-~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~-~~~~~~~~y~~l~~~~~~~l~  225 (343)
                      ........+...+ ...+|..+ .+...+..   ..++.....    ..    .+++. ..-.++..|..++....+...
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~----~~----~~~~~~~~~~~~~~~~~l~~~~~~t~~  227 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWI----KY----FLSPQPAMVFSLPAIIKLLLAAAAMGF  227 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHH----HH----HHhcCccccCCHHHHHHHHHHHHHHHH
Confidence            1111111111111 12233222 12222111   111111110    00    11221 112234444433333233333


Q ss_pred             HHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhcc
Q 019292          226 QLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLH  291 (343)
Q Consensus       226 Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs  291 (343)
                      -..+.|+++++.+++.+.+.. -..++++++.|.++++|.-  ++.    ...|.++++.|+++..
T Consensus       228 ~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~~~lgE~~--~~~----~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        228 GYAAWNVGILHGNMTLLATAS-YFTPVLSAALAALLLSTPL--SFS----FWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHHHccCHHHHHHHH-HhHHHHHHHHHHHHhCCCC--cHH----HHHHHHHHHHhHHHHh
Confidence            344679999999988666655 5678899999999999953  343    4467777888877654

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.50  E-value=9.8e-07  Score=74.69  Aligned_cols=110  Identities=25%  Similarity=0.358  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcc---------------------CCCCCCCCCcccccchhHHHHH---HHHHHHH
Q 019292            9 FILAVVSSAFIGSSFIIKKKGLRKAGA---------------------NGARAGSGGYGYLLEPLWWVGM---FTMIVGE   64 (343)
Q Consensus         9 v~LAl~ss~~~a~g~vlqk~~~~~~~~---------------------~~~r~~~~~~~~l~~p~W~~G~---~~~~~g~   64 (343)
                      .+.|+.|++|.++..++-|-|.+....                     .+.-..   ..-...+.|..=+   +.-.++-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHHHHHHHHH
Confidence            567899999999999999998763211                     011100   0112233342211   3345677


Q ss_pred             HHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeE
Q 019292           65 IANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (343)
Q Consensus        65 i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv  121 (343)
                      .+.|.|+.-++++.|.|+-..+.++..+++..+||||++..+|+|+.++++|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            788999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.48  E-value=1e-06  Score=73.21  Aligned_cols=101  Identities=14%  Similarity=0.210  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhcchhhHHH
Q 019292           11 LAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGM--FTMIVGEIANFVAYIYAPAVLVTPLGALSII   88 (343)
Q Consensus        11 LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~~~~~l~~p~W~~G~--~~~~~g~i~~~~Al~~ap~slV~Plga~~lv   88 (343)
                      +-+.|.++-..|.+..|++.+..+.     +   ... .++.++.+.  ..+.++..+...++...|++...|+-+++.+
T Consensus         5 ~l~~ai~~ev~g~~~lK~s~~~~~~-----~---~~~-~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v   75 (111)
T PRK15051          5 TLVFASLLSVAGQLCQKQATRPVAI-----G---KRR-KHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFV   75 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCc-----c---hhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence            3445566677788888887333221     0   111 133445555  5578889999999999999999999999999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        89 ~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ++.+++++++|||++.++++|+++++.|++++
T Consensus        76 ~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         76 WVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998765

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.43  E-value=7e-05  Score=69.52  Aligned_cols=211  Identities=17%  Similarity=0.229  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHH-HHhccccccchhhhHHHHhhhheeeEeecCCccCcCCH
Q 019292           55 VGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAH-FMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSV  133 (343)
Q Consensus        55 ~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~-~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~s~  133 (343)
                      .|......+..+.+.++...|....+++...+.++..+++. +++|||+++++|.|..+...|+.++......+......
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~  154 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLL  154 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHH
Confidence            34444667778899999999999999999999999999998 77799999999999999999987775543333221001


Q ss_pred             HHHHHHhcChhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHH-HhcCccccchhHH
Q 019292          134 QEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKL-TLEGLNQAKCIET  212 (343)
Q Consensus       134 ~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~-~~~g~~~~~~~~~  212 (343)
                      .++           +........ .+.....++..+.........      ....   ......-. .....+....+..
T Consensus       155 g~~-----------~~l~a~~~~-a~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~  213 (292)
T COG0697         155 GLL-----------LALAAALLW-ALYTALVKRLSRLGPVTLALL------LQLL---LALLLLLLFFLSGFGAPILSRA  213 (292)
T ss_pred             HHH-----------HHHHHHHHH-HHHHHHHHHhcCCChHHHHHH------HHHH---HHHHHHHHHHhccccccCCHHH
Confidence            111           111111111 111111221111111111100      0000   11110000 0111122223333


Q ss_pred             HHHHH-HHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhcc
Q 019292          213 WIFAM-VALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLH  291 (343)
Q Consensus       213 y~~l~-~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs  291 (343)
                      |..+. ..+.+...-....+++++..++..+.|.. ...+..+++.+.++++|.-  +..+    ..|..+++.|+.+..
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~--~~~~----~~G~~li~~g~~l~~  286 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPL--SPAQ----LLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCC--cHHH----HHHHHHHHHHHHHHh
Confidence            33332 23333334555778999999998887776 5677778889999999953  3443    345577888888876


Q ss_pred             cc
Q 019292          292 ST  293 (343)
Q Consensus       292 ~~  293 (343)
                      ..
T Consensus       287 ~~  288 (292)
T COG0697         287 LR  288 (292)
T ss_pred             cc
Confidence            55

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.42  E-value=8.6e-07  Score=73.22  Aligned_cols=67  Identities=31%  Similarity=0.474  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEee
Q 019292           56 GMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (343)
Q Consensus        56 G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~  123 (343)
                      |.+...++..+.+.|+.++| ..+.++.+++.+++.+++.+++|||+++++|.|++++.+|++++...
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            34444578889999999999 58999999999999999999999999999999999999999877553

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.29  E-value=9.4e-07  Score=73.62  Aligned_cols=101  Identities=18%  Similarity=0.228  Sum_probs=79.2

Q ss_pred             HHHHHHHHhhhhhhccC-CC-CCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHH
Q 019292           20 GSSFIIKKKGLRKAGAN-GA-RAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHF   96 (343)
Q Consensus        20 a~g~vlqk~~~~~~~~~-~~-r~~~~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~   96 (343)
                      +...-+-|||.+..++. .. +.-.+....++||..++++++...|++..+..++-+|+|+..|+. +++++++++.+++
T Consensus         9 G~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~   88 (113)
T PF10639_consen    9 GCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWL   88 (113)
T ss_pred             cCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHH
Confidence            34445567765443321 10 011133467899999999999999999999999999999999996 9999999999977


Q ss_pred             HhccccccchhhhHHHHhhhheee
Q 019292           97 MLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        97 ~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      +-+|..+++.+.|+.+++.|+.+.
T Consensus        89 lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   89 LGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hcCcccchhHHHHHHHHHcCeeee
Confidence            777777888899999999998765

Many members are annotated as potential transmembrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.28  E-value=0.00024  Score=68.37  Aligned_cols=224  Identities=13%  Similarity=0.184  Sum_probs=131.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCcC
Q 019292           52 LWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLN  131 (343)
Q Consensus        52 ~W~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~~  131 (343)
                      .+..+ .+..++..++-.|+.+.|...-+=+-+..++++++++.+++|+|.+++++++++++++|++++.....++++..
T Consensus        67 ~~~~~-~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   67 YAILS-FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            34444 44557778888999999999999999999999999999999999999999999999999998877655444332


Q ss_pred             CHHH-HHHHhcChhHHHHHHHHHHHHH--H-HHH--HhcccCCCc--chhHHHHHHHhhhHHH-HHHHHHHHHHHHHHhc
Q 019292          132 SVQE-IWVLATQPAFLLYVGSVVAVAL--V-LIL--YCAPRYGQT--NILIYIGICSVIGSLT-VMSVKAIGIAIKLTLE  202 (343)
Q Consensus       132 s~~e-l~~~~~~p~fl~y~~v~~~~~~--~-Li~--~~~~r~g~~--~~l~y~~i~gllg~~t-vl~~K~v~~~l~~~~~  202 (343)
                      +.++ -+..    +.+   .+.....+  + -.+  +..++++..  ..+.|.-.-++..... ....+ ..+... .+ 
T Consensus       146 ~~~~~~~~~----G~~---ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~-~~-  215 (303)
T PF08449_consen  146 NSSSFSSAL----GII---LLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRS-AI-  215 (303)
T ss_pred             ccccccchh----HHH---HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhH-HH-
Confidence            2211 1110    111   11111111  0 001  122234332  2355554444332221 11111 111110 00 


Q ss_pred             CccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHH
Q 019292          203 GLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFIT  282 (343)
Q Consensus       203 g~~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~  282 (343)
                       .....||..+..++....+...-..+.+.-.+++++....=+. ..=...+++.+.++|++  +.++.++.    |.++
T Consensus       216 -~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~-t~Rk~~sillS~~~f~~--~~~~~~~~----G~~l  287 (303)
T PF08449_consen  216 -RFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT-TLRKFLSILLSVIIFGH--PLSPLQWI----GIVL  287 (303)
T ss_pred             -HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH-HHHHHHHHHHHHHhcCC--cCChHHHH----HHHH
Confidence             1223677776666666666444445667778888775544433 33466788899999986  56676664    4445


Q ss_pred             HHHhhhhccccC
Q 019292          283 VLSGTSVLHSTR  294 (343)
Q Consensus       283 ii~GV~lLs~~~  294 (343)
                      ++.|+.+=+..|
T Consensus       288 v~~g~~~~~~~~  299 (303)
T PF08449_consen  288 VFAGIFLYSYAK  299 (303)
T ss_pred             hHHHHHHHHHhh
Confidence            666666544333

; GO: 0055085 transmembrane transport

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.19  E-value=5.1e-05  Score=74.75  Aligned_cols=287  Identities=14%  Similarity=0.121  Sum_probs=154.6

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhc---------------------cCCCCCCCCCccccc---chhHHHH
Q 019292            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLRKAG---------------------ANGARAGSGGYGYLL---EPLWWVG   56 (343)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~---------------------~~~~r~~~~~~~~l~---~p~W~~G   56 (343)
                      |+++..+|++..+++.++.+.=.+=|||. ++=+                     .-..|   +...+++   ...|..+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHH
Confidence            67788999999999999999999999983 2110                     00111   1122332   3556666


Q ss_pred             HHH---HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcccc---c----cchhhhHHHHhhhheeeEeecC
Q 019292           57 MFT---MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKL---Q----KMGMLGCLLCVVGSTMIVLHAP  125 (343)
Q Consensus        57 ~~~---~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~---~----~~~~~G~~lii~G~~~vv~~ap  125 (343)
                      ++.   -.+|++.++.+..+...|+-.|++ +++++.+.++..++++|=-   +    ....+|++++++|+++....+.
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            644   467999999999999999999997 6789999999999988632   3    2346799999999988766443


Q ss_pred             CccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHh---------cccCCCcchh-HHHHHHH-hhhHHHHHHHHHHH
Q 019292          126 LEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYC---------APRYGQTNIL-IYIGICS-VIGSLTVMSVKAIG  194 (343)
Q Consensus       126 ~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~---------~~r~g~~~~l-~y~~i~g-llg~~tvl~~K~v~  194 (343)
                      ..++..+.||-.+.-...+ +..+.+..+......+.+         .+..|...+- .....++ ++|++..-..=+.-
T Consensus       157 ~k~~~~~~~~~~~~~~~KG-i~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~  235 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKG-LILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFI  235 (345)
T ss_pred             hcccccccccccccchHhH-HHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3332222110000000112 222222222111110000         0112211110 0011112 23443222111111


Q ss_pred             HHHH-HHhcCccccch-----hHHHHHHHHHHHHHHHHHHHHhHhhccc-Cc--ccccchhHhHHhHHHHHHHHHHhccc
Q 019292          195 IAIK-LTLEGLNQAKC-----IETWIFAMVALTCVITQLNYLNMALDTF-NT--AVVSPIYYAMFTSFTIFASAIMFKDY  265 (343)
Q Consensus       195 ~~l~-~~~~g~~~~~~-----~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~-~a--~~v~P~~~v~~t~~~i~~g~i~f~E~  265 (343)
                      .+-| .+.+....+..     +..+++....-+.=..|..+.-.+-+.- .+  ....++-+-...+.+.+.|+ ++|||
T Consensus       236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~  314 (345)
T PRK13499        236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW  314 (345)
T ss_pred             HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence            1001 11110112222     4445555544444445543332222211 11  11223333444466777787 59999


Q ss_pred             cCCCHHHHHHHHHHHHHHHHhhhhcccc
Q 019292          266 SGQSASSIASELCGFITVLSGTSVLHST  293 (343)
Q Consensus       266 ~~~~~~~~~~~~~G~~~ii~GV~lLs~~  293 (343)
                      +..+..+.....+|+++++.|.+++...
T Consensus       315 K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        315 KGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9988999999999999999999988654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.18  E-value=0.00029  Score=69.43  Aligned_cols=68  Identities=13%  Similarity=0.159  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeE
Q 019292           53 WWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (343)
Q Consensus        53 W~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv  121 (343)
                      ...|+.-. .+..+...++.+.+++..+=+-+.+.+++++++++++|||++++.+.|+++++.|+.+..
T Consensus       118 lp~gl~~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        118 LPQGLCHL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34444333 235556689999999999999999999999999999999999999999999999998765

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.13  E-value=0.00022  Score=68.04  Aligned_cols=214  Identities=13%  Similarity=0.211  Sum_probs=126.9

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccccchh----hhHHHHhhhheeeEe
Q 019292           51 PLWWVGMFT---MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGM----LGCLLCVVGSTMIVL  122 (343)
Q Consensus        51 p~W~~G~~~---~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~~~~~----~G~~lii~G~~~vv~  122 (343)
                      ..|+.+++.   -.+|+++++.++.....|.-.|++ +.+++.|.+.+.++++|--+..++    .+.+++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            567777755   468999999999999999999998 899999999999999998887665    488899999887766


Q ss_pred             ecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHHHh-
Q 019292          123 HAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTL-  201 (343)
Q Consensus       123 ~ap~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~~~-  201 (343)
                      ...++++..+.++..+     ..+ +  +.+..+....|..-||..+-+            +.+.++-++++..+-... 
T Consensus       123 ~~~~~~~~~~~~~~~k-----gi~-~--Ll~stigy~~Y~~~~~~~~~~------------~~~~~lPqaiGm~i~a~i~  182 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK-----GIL-A--LLISTIGYWIYSVIPKAFHVS------------GWSAFLPQAIGMLIGAFIF  182 (269)
T ss_pred             ccccccccccccchhh-----HHH-H--HHHHHHHHHHHHHHHHhcCCC------------hhHhHHHHHHHHHHHHHHH
Confidence            5555444333222221     111 1  111112223344445553322            233333333333222111 


Q ss_pred             c--CccccchhHHHHHHHHHHHHHHHHH-HHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHH
Q 019292          202 E--GLNQAKCIETWIFAMVALTCVITQL-NYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELC  278 (343)
Q Consensus       202 ~--g~~~~~~~~~y~~l~~~~~~~l~Q~-~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~  278 (343)
                      .  ..+++.+..+|.=++..+.-.+.=+ +++...  .--.+.-.|+-|.. .+.+.++|+.++||.+  +..++....+
T Consensus       183 ~~~~~~~~~~k~~~~nil~G~~w~ignl~~~is~~--~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~~~  257 (269)
T PF06800_consen  183 NLFSKKPFFEKKSWKNILTGLIWGIGNLFYLISAQ--KNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYTLI  257 (269)
T ss_pred             hhcccccccccchHHhhHHHHHHHHHHHHHHHhHH--hccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHHHH
Confidence            0  0233333344433333332211111 111111  11223344555555 5567889999999976  4678889999


Q ss_pred             HHHHHHHhhhh
Q 019292          279 GFITVLSGTSV  289 (343)
Q Consensus       279 G~~~ii~GV~l  289 (343)
                      |+++++.|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            99999888765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=98.04  E-value=0.00073  Score=63.07  Aligned_cols=62  Identities=11%  Similarity=0.134  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeE
Q 019292           60 MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV  121 (343)
Q Consensus        60 ~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv  121 (343)
                      +..+..+.+.|+...|.+..+-+....-++.++++++++|||+++++|.|+++..+|+++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677889999999999999999999999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.98  E-value=2.4e-05  Score=74.85  Aligned_cols=125  Identities=18%  Similarity=0.122  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---CC-----------CCCCCcccccch-----hHHHHHHHHHHHHH
Q 019292            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANG---AR-----------AGSGGYGYLLEP-----LWWVGMFTMIVGEI   65 (343)
Q Consensus         5 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~---~r-----------~~~~~~~~l~~p-----~W~~G~~~~~~g~i   65 (343)
                      ..+|.++++.++++.+...++.||..++.+...   ..           ...+. ....++     .++.|+...+++..
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHH
Confidence            457999999999999999998777533221100   00           00000 011121     24566677778888


Q ss_pred             HHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccCc
Q 019292           66 ANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESL  130 (343)
Q Consensus        66 ~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~~  130 (343)
                      ++..++...|++.++++..+..+++.+++.++++|+++..+++|.++++.|+.......++|++.
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~  289 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKI  289 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999988775555555544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.69  E-value=0.00029  Score=65.32  Aligned_cols=114  Identities=17%  Similarity=0.171  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---CC--------------CCCCCcccccchhHH----HHHHHHHH
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANG---AR--------------AGSGGYGYLLEPLWW----VGMFTMIV   62 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~---~r--------------~~~~~~~~l~~p~W~----~G~~~~~~   62 (343)
                      ++..|..+++.|+++.+...++.||..++.+...   .+              ...+.........|+    .|....++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            4567999999999999999999999654322100   00              000011111222332    34444567


Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhh
Q 019292           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGS  117 (343)
Q Consensus        63 g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~  117 (343)
                      +..+++.++...|++.+..+..+..+++.+++.+++||+++..++.|+++++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999999999999999999986

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.63  E-value=0.00024  Score=70.46  Aligned_cols=122  Identities=18%  Similarity=0.207  Sum_probs=85.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-------------------CCCCCCCcccc--cchhHHHHHHH----
Q 019292            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANG-------------------ARAGSGGYGYL--LEPLWWVGMFT----   59 (343)
Q Consensus         5 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-------------------~r~~~~~~~~l--~~p~W~~G~~~----   59 (343)
                      +.+|.++++.|+++.+.+.++||+-.++-+...                   ...+.+.....  .+. ++..++.    
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i~  265 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHHH
Confidence            577999999999999999999998654422100                   00000000000  111 1112221    


Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCc
Q 019292           60 MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (343)
Q Consensus        60 ~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~  127 (343)
                      ..++..++..+....+++.+..+.-+..+++++++..+++|+++..+++|+++++.|+.++.....+|
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            22356667778889999999999999999999999999999999999999999999998765443433

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.57  E-value=0.00089  Score=56.50  Aligned_cols=73  Identities=15%  Similarity=0.168  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecC
Q 019292           53 WWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAP  125 (343)
Q Consensus        53 W~~G~~~~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap  125 (343)
                      |+..+.+++++..+...|+...|+++.-|+ .+++.+...+.+.+++||+++..+++|+.+++.|++.+=..++
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            456666788888899999999999999999 5799999999999999999999999999999999987744443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.55  E-value=0.00062  Score=56.55  Aligned_cols=75  Identities=15%  Similarity=0.201  Sum_probs=63.7

Q ss_pred             chhHHH-HHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeec
Q 019292           50 EPLWWV-GMFTMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHA  124 (343)
Q Consensus        50 ~p~W~~-G~~~~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~a  124 (343)
                      +|.|.. .+.+++++...-..|+...|.++.-|. .+++.+.+.+.+.+++||+++..+++|..+++.|++.+-..+
T Consensus        29 ~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         29 RLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455544 445577778888889999999999999 779999999999999999999999999999999998774433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.48  E-value=0.0071  Score=56.94  Aligned_cols=69  Identities=20%  Similarity=0.335  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCC
Q 019292           58 FTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (343)
Q Consensus        58 ~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~  126 (343)
                      +++.+.+.+.++++...|++.-|=+...-++++++++.++||+|+++++|++..+.+.|++++-.....
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            668999999999999999999999999999999999999999999999999999999999887654433

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.48  E-value=9e-05  Score=60.16  Aligned_cols=67  Identities=25%  Similarity=0.465  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        54 ~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ..|.+...++..+...++...|++.++++..++.+++.+++.+++||+++++++.|+++++.|++++
T Consensus        58 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   58 FLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            4455555778889999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.44  E-value=0.00071  Score=64.65  Aligned_cols=117  Identities=16%  Similarity=0.112  Sum_probs=85.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC----------------CCCCCCCCcccccchhHH----HHHHHHHHH
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN----------------GARAGSGGYGYLLEPLWW----VGMFTMIVG   63 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~----------------~~r~~~~~~~~l~~p~W~----~G~~~~~~g   63 (343)
                      ++..|..+++.|+++.+.+.+.+||..++.+..                ..-.+...........|+    .|+...+++
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            346799999999999999999988843221100                000000000101112232    344445677


Q ss_pred             HHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           64 EIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        64 ~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ..++..++...|.+.+..+..+..+++++++.+++||+++..+++|+++++.|+.+.
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence            788899999999999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.44  E-value=0.00034  Score=66.45  Aligned_cols=114  Identities=18%  Similarity=0.095  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-C-C--C-----C-C---------CCccc-ccchhH----HHHHHHHH
Q 019292            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGANG-A-R--A-----G-S---------GGYGY-LLEPLW----WVGMFTMI   61 (343)
Q Consensus         6 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-~-r--~-----~-~---------~~~~~-l~~p~W----~~G~~~~~   61 (343)
                      ..|..+++.++++.+.+.++.|+..++.+... . .  .     . .         +.... ...+.|    +.+.....
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence            35777899999999999888887532211100 0 0  0     0 0         00000 011122    22333345


Q ss_pred             HHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 019292           62 VGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (343)
Q Consensus        62 ~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~  119 (343)
                      ++..+++.++...|++.+.++.-++.+++.+++.+++||+++..+++|.++++.|+.+
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            6778889999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.42  E-value=0.00072  Score=64.21  Aligned_cols=266  Identities=22%  Similarity=0.321  Sum_probs=140.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccC--CCCC------CCCCcccccchh--------HH--HHHHHHHHHHHHH
Q 019292            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGAN--GARA------GSGGYGYLLEPL--------WW--VGMFTMIVGEIAN   67 (343)
Q Consensus         6 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~--~~r~------~~~~~~~l~~p~--------W~--~G~~~~~~g~i~~   67 (343)
                      .+|+.+.-+| .+...+.++-+|.....+..  ..|-      .-...-|.+.|.        |+  -|+.-. .|..+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~-tgvmlm  114 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGF-TGVMLM  114 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhh-hHHHHH
Confidence            3577888888 77777777766654333221  0110      000112223222        21  122221 344566


Q ss_pred             HHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeE----eecCCccCcCCHHHHHHHhcCh
Q 019292           68 FVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIV----LHAPLEESLNSVQEIWVLATQP  143 (343)
Q Consensus        68 ~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv----~~ap~~~~~~s~~el~~~~~~p  143 (343)
                      ..||.+.|++=-.=+.-.+-+++.++|+.+||||.++.|.+|......|+++++    +|+.+++...+.+   .-...|
T Consensus       115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~---~~~~~~  191 (346)
T KOG4510|consen  115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ---VEYDIP  191 (346)
T ss_pred             HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc---ccccCC
Confidence            777777776655556677889999999999999999999999999999998874    5555443322221   011223


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcccCCCc-ch---hHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCccccch-hHH-HHHHH
Q 019292          144 AFLLYVGSVVAVALVLILYCAPRYGQT-NI---LIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKC-IET-WIFAM  217 (343)
Q Consensus       144 ~fl~y~~v~~~~~~~Li~~~~~r~g~~-~~---l~y~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~-~~~-y~~l~  217 (343)
                      .-..-..-+.....+.+  +-|.-|++ +.   +-|-+.-+++-+  ++-.-.         -|.-|+.| +.= |+++.
T Consensus       192 gt~aai~s~lf~asvyI--ilR~iGk~~h~~msvsyf~~i~lV~s--~I~~~~---------ig~~~lP~cgkdr~l~~~  258 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYI--ILRYIGKNAHAIMSVSYFSLITLVVS--LIGCAS---------IGAVQLPHCGKDRWLFVN  258 (346)
T ss_pred             chHHHHHhHhhhhhHHH--HHHHhhccccEEEEehHHHHHHHHHH--HHHHhh---------ccceecCccccceEEEEE
Confidence            32211111111111111  11111221 11   222221111111  111111         12222222 222 33444


Q ss_pred             HHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCCCC
Q 019292          218 VALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD  297 (343)
Q Consensus       218 ~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~~~  297 (343)
                      ..+.+.+.|+ ++.+++|+=.+-- +.++..++.+++.+.-+++|+||-.  .|.+    +|.+.++..++.-+..|-..
T Consensus       259 lGvfgfigQI-llTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~ws~----~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  259 LGVFGFIGQI-LLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--IWSW----VGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             ehhhhhHHHH-HHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--HHHh----hceeeeehhHHHHHHHHHhc
Confidence            5555666776 9999998755533 3567788899999999999999853  4544    45444555555545444433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.32  E-value=0.001  Score=63.79  Aligned_cols=115  Identities=17%  Similarity=0.094  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC------------CCCCCcccccchhHHHHH----HHHHHHHHHHHH
Q 019292            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR------------AGSGGYGYLLEPLWWVGM----FTMIVGEIANFV   69 (343)
Q Consensus         6 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r------------~~~~~~~~l~~p~W~~G~----~~~~~g~i~~~~   69 (343)
                      ..|..+++.|+++.+.+.++.||-.++.+.....            .-.+....-.++..|..+    ...+++..++..
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~  234 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNV  234 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4699999999999999999998853221100000            000000111122222112    124557778899


Q ss_pred             HHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           70 AYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        70 Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ++...|++.++++..+..+++.+++.++++|+++..+++|+++++.|+.+.
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            999999999999999999999999999999999999999999999998655

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.25  E-value=0.0021  Score=61.69  Aligned_cols=116  Identities=20%  Similarity=0.223  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC--------C----------CCCcc------cccchhHH-----H
Q 019292            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARA--------G----------SGGYG------YLLEPLWW-----V   55 (343)
Q Consensus         5 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~--------~----------~~~~~------~l~~p~W~-----~   55 (343)
                      +..|..+++.++++.+...+++||-.++.+......        +          .++..      .-.++.+|     .
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            357999999999999999999998533221100000        0          00000      00122222     2


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           56 GMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        56 G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      |+...+++..+++.++.-.++.-+.++..+..+++.+++.++++|+++..+++|.++++.|+.+.
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            33445566777777778889999999999999999999999999999999999999999998654

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.23  E-value=0.0025  Score=54.29  Aligned_cols=77  Identities=13%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             hhHHHHHHHHHHHH-HHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhh
Q 019292          209 CIETWIFAMVALTC-VITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGT  287 (343)
Q Consensus       209 ~~~~y~~l~~~~~~-~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV  287 (343)
                      ++..|.+++..... .+..+ +.=+||+.++++.|.|+= -.....+++-+..+++|..+  ..+    ..|++++.+|+
T Consensus        63 ~~k~~lflilSGla~glswl-~Yf~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls--~~~----~iG~~LI~~Ga  134 (140)
T COG2510          63 GPKSWLFLILSGLAGGLSWL-LYFRALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLS--LPT----WIGIVLIVIGA  134 (140)
T ss_pred             CcceehhhhHHHHHHHHHHH-HHHHHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCC--HHH----HHHHHHHHhCe
Confidence            45555544444333 33333 333699999999999984 45667788899999999654  333    37888999999


Q ss_pred             hhcccc
Q 019292          288 SVLHST  293 (343)
Q Consensus       288 ~lLs~~  293 (343)
                      ++++++
T Consensus       135 ilvs~~  140 (140)
T COG2510         135 ILVSLR  140 (140)
T ss_pred             eeEecC
Confidence            998763

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.00  E-value=0.0039  Score=49.97  Aligned_cols=64  Identities=16%  Similarity=0.067  Sum_probs=37.1

Q ss_pred             chhHHHHHH-HHHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhccccccchhhhHHHH
Q 019292           50 EPLWWVGMF-TMIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLC  113 (343)
Q Consensus        50 ~p~W~~G~~-~~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv~~~~la~~~l~e~~~~~~~~G~~li  113 (343)
                      ++.|..+.+ +++++..+...|+...|.++.-|+ .+++.+...+.+.++.||+++..++.|+.++
T Consensus        28 ~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   28 QLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             ------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            455555555 577888888999999999999997 5699999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.93  E-value=0.013  Score=48.72  Aligned_cols=72  Identities=15%  Similarity=0.194  Sum_probs=58.6

Q ss_pred             cchhHHHHHHH-HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           49 LEPLWWVGMFT-MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        49 ~~p~W~~G~~~-~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ++|.|.+.+.. ++++..+--.|+...|..+.-+.= +++.+...+.+.++.||+++..++.|..+++.|++.+
T Consensus        33 ~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         33 RRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            45666666544 555666667778888999888874 5889999999999999999999999999999998754

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.89  E-value=0.021  Score=47.31  Aligned_cols=80  Identities=16%  Similarity=0.309  Sum_probs=59.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHh
Q 019292          207 AKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSG  286 (343)
Q Consensus       207 ~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~G  286 (343)
                      +++|...........+...-..++..++++-|..+.+|+.+ .-.+.+.+.|..+|+|.  .++.+    .+|..+++.|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~--ls~~~----~~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEP--VSPRH----WCGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHH
Confidence            45554444444444555556678888999999999999999 67777888999999995  44554    4677788899


Q ss_pred             hhhcccc
Q 019292          287 TSVLHST  293 (343)
Q Consensus       287 V~lLs~~  293 (343)
                      +++++++
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            9988765

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.76  E-value=0.0065  Score=56.29  Aligned_cols=116  Identities=26%  Similarity=0.291  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccC-CCC--------------CCCCC-cccc-cchhH--HHHHHHHHHHHHH
Q 019292            6 LIGFILAVVSSAFIGSSFIIKKKGLRKAGAN-GAR--------------AGSGG-YGYL-LEPLW--WVGMFTMIVGEIA   66 (343)
Q Consensus         6 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~-~~r--------------~~~~~-~~~l-~~p~W--~~G~~~~~~g~i~   66 (343)
                      ..|..+++.++++.+...+++|+-. +.... ...              ..... .... +...+  +.|+...+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999998643 11100 000              00000 0111 11111  1333334456778


Q ss_pred             HHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEe
Q 019292           67 NFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (343)
Q Consensus        67 ~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~  122 (343)
                      .+.++...|...++++..+..+++.+++.++++|+++..++.|+++++.|..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999999876533

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.58  E-value=0.0073  Score=49.78  Aligned_cols=71  Identities=18%  Similarity=0.068  Sum_probs=58.1

Q ss_pred             chhHHHHHHH-HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           50 EPLWWVGMFT-MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        50 ~p~W~~G~~~-~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ++.|++.++. +.++..+-..|+...|.++.-++= +++.+.+.+.+.++.||+++..++.|+.+++.|++.+
T Consensus        28 ~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         28 RLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            5566555543 566666777778888998887764 4999999999999999999999999999999998765

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.33  E-value=0.01  Score=49.02  Aligned_cols=71  Identities=14%  Similarity=0.125  Sum_probs=58.1

Q ss_pred             chhHHHHHHH-HHHHHHHHHHHHhhcchhhhhcc-hhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           50 EPLWWVGMFT-MIVGEIANFVAYIYAPAVLVTPL-GALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        50 ~p~W~~G~~~-~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      |+.|.+.++. +++.+.+-..|+...|..+.-++ ++++.+..++.+.+++||+++..+++|..+++.|++.+
T Consensus        29 ~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          29 RLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            4566665544 56666677778888888887665 78899999999999999999999999999999998754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.29  E-value=0.049  Score=46.44  Aligned_cols=75  Identities=12%  Similarity=0.115  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHH-HHhccccCCCHHHHHHHHHHHHHHHHhhhhccccC
Q 019292          216 AMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASA-IMFKDYSGQSASSIASELCGFITVLSGTSVLHSTR  294 (343)
Q Consensus       216 l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~-i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~  294 (343)
                      +...+++.......++.+|++.|.+...|+....+....+.+-. ++|+|..  ++.    ..+|.++++.||+++++++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l--s~~----~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF--SLK----KTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHhccCC
Confidence            34455566667778999999999999999998877554444443 4899953  444    4578889999999998765


Q ss_pred             CC
Q 019292          295 EP  296 (343)
Q Consensus       295 ~~  296 (343)
                      +.
T Consensus       125 ~~  126 (129)
T PRK02971        125 TK  126 (129)
T ss_pred             CC
Confidence            53

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.24  E-value=0.22  Score=49.06  Aligned_cols=73  Identities=18%  Similarity=0.234  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCC
Q 019292           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (343)
Q Consensus        54 ~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~  126 (343)
                      -+=-+++.+-+-.+++++...|++.=|....+-++.++++...+|++|+++++|...++...|+.++=+..++
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            3334677787779999999999999999999999999999999999999999999999999999877533333

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.13  E-value=0.086  Score=43.76  Aligned_cols=80  Identities=13%  Similarity=0.132  Sum_probs=60.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHH
Q 019292          206 QAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLS  285 (343)
Q Consensus       206 ~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~  285 (343)
                      .|+++.+.+..   +++...-..++.+++++.|..+.+|+-...=+..+.+.|.++|+|..  ++.    ...|..+++.
T Consensus        26 gf~~~~~~i~~---~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~--~~~----~~~gi~lIi~   96 (110)
T PRK09541         26 GFTRLWPSVGT---IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLP----AIIGMMLICA   96 (110)
T ss_pred             CCCchhHHHHH---HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHH
Confidence            46777776644   33444456688999999999999998887788888999999999954  454    3467778999


Q ss_pred             hhhhccccC
Q 019292          286 GTSVLHSTR  294 (343)
Q Consensus       286 GV~lLs~~~  294 (343)
                      ||+++....
T Consensus        97 GVi~l~l~~  105 (110)
T PRK09541         97 GVLVINLLS  105 (110)
T ss_pred             HHHHHhcCC
Confidence            999996543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.90  E-value=0.033  Score=53.51  Aligned_cols=115  Identities=19%  Similarity=0.185  Sum_probs=82.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC--CC-----CC----CCc---ccccchhHH----HHHHHHHHHHHH
Q 019292            5 NLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGA--RA-----GS----GGY---GYLLEPLWW----VGMFTMIVGEIA   66 (343)
Q Consensus         5 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~--r~-----~~----~~~---~~l~~p~W~----~G~~~~~~g~i~   66 (343)
                      ...|+..++.|+++.+.-.+.-|+.. ..+..-.  ..     +.    -.+   +-..++.+|    .|+. ..+++.+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~  227 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF  227 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence            36799999999999988888777532 1110000  00     00    000   111222333    4444 4677778


Q ss_pred             HHHHHh-hcchhhhhcchhhHHHHHHHHHHHHhccccccchh----hhHHHHhhhheeeE
Q 019292           67 NFVAYI-YAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGM----LGCLLCVVGSTMIV  121 (343)
Q Consensus        67 ~~~Al~-~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~----~G~~lii~G~~~vv  121 (343)
                      .+.+.. ..+.+.-.++..+..+.+.+.+.+++||+.+++++    +|+++++.|+.++.
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            888888 99999999999999999999999999999999999    99999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.88  E-value=0.048  Score=44.96  Aligned_cols=80  Identities=10%  Similarity=0.192  Sum_probs=61.1

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHH
Q 019292          205 NQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVL  284 (343)
Q Consensus       205 ~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii  284 (343)
                      +.|+++.++++.++   +...-.+++.+|+|+-|..+.+++-...=+..+.+.|.++|+|..  ++.+    .+|+.+++
T Consensus        24 ~gf~~~~~~~~~i~---~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~--~~~~----~~gi~lIi   94 (105)
T PRK11431         24 HGFSRLTPSIITVT---AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA--SPAR----LLSLALIV   94 (105)
T ss_pred             hCCccHHHHHHHHH---HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC--CHHH----HHHHHHHH
Confidence            34778877776543   334445789999999999888888888888888999999999954  4543    46677899


Q ss_pred             Hhhhhcccc
Q 019292          285 SGTSVLHST  293 (343)
Q Consensus       285 ~GV~lLs~~  293 (343)
                      .||+.|...
T Consensus        95 ~GVv~l~l~  103 (105)
T PRK11431         95 AGIIGLKLS  103 (105)
T ss_pred             HHHHhhhcc
Confidence            999998544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=95.79  E-value=0.016  Score=55.45  Aligned_cols=62  Identities=15%  Similarity=0.007  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEe
Q 019292           61 IVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (343)
Q Consensus        61 ~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~  122 (343)
                      .++..+.+.++...|++.++++.-++.+++.+++.++++|+++...+.|+++++.|+.++..
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            36778899999999999999999999999999999999999999999999999988876543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.48  E-value=0.13  Score=50.85  Aligned_cols=126  Identities=21%  Similarity=0.261  Sum_probs=80.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC------C--------CC-CCCCCcccccchhHHHHHHH-HHHHHHH
Q 019292            3 SSNLIGFILAVVSSAFIGSSFIIKKKGLRKAGAN------G--------AR-AGSGGYGYLLEPLWWVGMFT-MIVGEIA   66 (343)
Q Consensus         3 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~------~--------~r-~~~~~~~~l~~p~W~~G~~~-~~~g~i~   66 (343)
                      ++.++|=++++.|+++.|++.++|++-.++.++.      |        .- .--|+ .-+++-.|=..... ++...++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~-~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILER-SGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheeh-hhhhccCCChhhHHHHHHHHHH
Confidence            4678999999999999999999999976553321      0        00 00000 11111112112222 3333445


Q ss_pred             HHHHHhhcchhhh------hcch-hhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCccC
Q 019292           67 NFVAYIYAPAVLV------TPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEES  129 (343)
Q Consensus        67 ~~~Al~~ap~slV------~Plg-a~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~~  129 (343)
                      .+.-|...|..+.      .-++ ..+-++++++..++.|+++++.-++|.+++++|.++.....+++++
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            6666766666442      2222 3457889999999999999999999999999998877665554443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.43  E-value=0.078  Score=44.00  Aligned_cols=78  Identities=17%  Similarity=0.240  Sum_probs=59.3

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHH
Q 019292          205 NQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVL  284 (343)
Q Consensus       205 ~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii  284 (343)
                      +.|++|.+.+..++.   ...=.+++.+|+|+-|..+.+|+-...-+..+.+.|.++|+|..  ++.    ...|..+++
T Consensus        30 ~gf~~~~~~~~~~~~---~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~--~~~----~~~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGILSLAA---VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL--NRK----GWIGLVLLL  100 (109)
T ss_pred             cCCcchHHHHHHHHH---HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHH
Confidence            347788776554433   33445689999999999998888888888899999999999954  454    346677888


Q ss_pred             Hhhhhcc
Q 019292          285 SGTSVLH  291 (343)
Q Consensus       285 ~GV~lLs  291 (343)
                      .||+.|.
T Consensus       101 ~GVi~lk  107 (109)
T PRK10650        101 AGMVMIK  107 (109)
T ss_pred             HHHHHhc
Confidence            9998874

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.40  E-value=0.73  Score=46.04  Aligned_cols=74  Identities=16%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHH---HHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCcc
Q 019292           55 VGMFTMIVGEIAN---FVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEE  128 (343)
Q Consensus        55 ~G~~~~~~g~i~~---~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~  128 (343)
                      .+..+..+-+++|   =+||++-.++-.+=+.+.+=+|+..++..+.+||++....+++++++.|++++.....++.
T Consensus       161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            4444444444444   3578999999999999999999999999999999999999999999999887776655443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.31  E-value=3  Score=40.35  Aligned_cols=118  Identities=19%  Similarity=0.168  Sum_probs=75.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHh----hhhh--hcc------------CCCCCCCCCcccccchhHHHHHHHHHHHH
Q 019292            3 SSNLIGFILAVVSSAFIGSSFIIKKK----GLRK--AGA------------NGARAGSGGYGYLLEPLWWVGMFTMIVGE   64 (343)
Q Consensus         3 ~~~~iGv~LAl~ss~~~a~g~vlqk~----~~~~--~~~------------~~~r~~~~~~~~l~~p~W~~G~~~~~~g~   64 (343)
                      .+.--|+++++.+.++-|.--..-|.    +..+  ++|            .-.|.-.+.++..++|+=+....+..+=.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            34556899999999887765433332    2111  000            00011112345677887777776665555


Q ss_pred             HHHHHHHhhcchh---hhhcchh-hHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           65 IANFVAYIYAPAV---LVTPLGA-LSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        65 i~~~~Al~~ap~s---lV~Plga-~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      ..|..-+-+||-.   +=+.+|= +.-++|.++++.++|||+++.+|+.+.+..+|+..-
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            5777778888765   2223332 234678999999999999999999999999998643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.28  E-value=0.3  Score=41.25  Aligned_cols=70  Identities=17%  Similarity=0.327  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCC
Q 019292          220 LTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE  295 (343)
Q Consensus       220 ~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~  295 (343)
                      +++...-.+++.+++++-|..+.+|+....=++.+.+.|..+|+|..  +..    -.+|..+++.||+.+....+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~--s~~----~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL--SLM----KIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHHHHHHhhcCCC
Confidence            34444556789999999999999999887888888999999999954  444    44677889999999965543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.20  E-value=0.14  Score=40.92  Aligned_cols=66  Identities=14%  Similarity=0.104  Sum_probs=32.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHH
Q 019292          206 QAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASE  276 (343)
Q Consensus       206 ~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~  276 (343)
                      .++++...+..   +.+...-..++.+|+++-|..+.+|+....=+....+.|..+|+|.  .++.++.+.
T Consensus        25 g~~~~~~~~~~---~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~--~s~~~~~gi   90 (93)
T PF00893_consen   25 GFTQLIPTILA---VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES--LSLSKWLGI   90 (93)
T ss_dssp             ---------HH---HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             hhcchhhHHHH---HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHhhe
Confidence            35555554433   2344555679999999999999999999888889999999999995  445555443

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.80  E-value=0.054  Score=51.78  Aligned_cols=117  Identities=15%  Similarity=0.222  Sum_probs=76.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC-------C----------CCCccccc------------chhHH
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGARA-------G----------SGGYGYLL------------EPLWW   54 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~-------~----------~~~~~~l~------------~p~W~   54 (343)
                      .+..|.++++.|+++.++..++.||-.++.+.+..+.       +          .++.....            ...|.
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            4567999999999999999999888543111000000       0          00000000            01121


Q ss_pred             HHHHH----HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheee
Q 019292           55 VGMFT----MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        55 ~G~~~----~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~v  120 (343)
                      .+...    +...+..++.++...+++-.+-.+.+.-+++.+++.++++|+++..+++|.++++.|+.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            12111    1112234456777888888888888889999999999999999999999999999998654

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=94.64  E-value=0.18  Score=42.81  Aligned_cols=56  Identities=18%  Similarity=0.424  Sum_probs=47.2

Q ss_pred             HHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 019292           64 EIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (343)
Q Consensus        64 ~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~  119 (343)
                      +..++.......+.--+=++.+--+...+++..+++|+++..++.|+++++.|...
T Consensus        95 n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   95 NLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            34556666667777777788888899999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=94.10  E-value=0.17  Score=48.73  Aligned_cols=70  Identities=19%  Similarity=0.219  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEee
Q 019292           54 WVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (343)
Q Consensus        54 ~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~  123 (343)
                      ..=.++.+.|..+..++|.+..++--|-+-+.-++|..+++.-+||++++.++|+|...+..|.+.+...
T Consensus        90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            3356788899999999999999999999999999999999999999999999999999999999887654

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=93.56  E-value=0.32  Score=40.23  Aligned_cols=78  Identities=21%  Similarity=0.208  Sum_probs=58.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHh
Q 019292          207 AKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSG  286 (343)
Q Consensus       207 ~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~G  286 (343)
                      |+++.+++..++.   ...-..+|.+|+++-|..+.+++-.-.=+..+.+.|.++|+|..  ++.    -..|..++++|
T Consensus        27 f~~~~~~il~~v~---~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l--~~~----~~~gl~LiiaG   97 (106)
T COG2076          27 FTRLWPSILTIVG---YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL--SLI----KLLGLALILAG   97 (106)
T ss_pred             ccccchHHHHHHH---HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC--CHH----HHHHHHHHHHH
Confidence            5666665544333   33345688999999999988888888888889999999999954  444    34677789999


Q ss_pred             hhhcccc
Q 019292          287 TSVLHST  293 (343)
Q Consensus       287 V~lLs~~  293 (343)
                      ++.|...
T Consensus        98 vi~Lk~~  104 (106)
T COG2076          98 VIGLKLG  104 (106)
T ss_pred             HHHhhhc
Confidence            9988643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=93.18  E-value=1.6  Score=35.56  Aligned_cols=67  Identities=19%  Similarity=0.217  Sum_probs=47.7

Q ss_pred             HHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccCCC
Q 019292          222 CVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREP  296 (343)
Q Consensus       222 ~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~~~  296 (343)
                      +...+......|++..+ ..+.|+ +.+.++++.+.|.++|+|  +.++..    ..|.+++..|++++..++..
T Consensus        44 ~~~~~~~~~~~a~~~~~-~~v~~i-~~~~pi~~~ll~~~~~~e--r~~~~~----~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   44 GFGVAYLLFFYALSYAP-ALVAAI-FSLSPIFTALLSWLFFKE--RLSPRR----WLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHhCc-HHHHHH-HHHHHHHHHHHHHHHhcC--CCCHHH----HHHHHHHHHHHHHHhhhhcc
Confidence            33344556667888888 466644 557999999999999999  445553    35667788899988765543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=92.50  E-value=0.68  Score=44.40  Aligned_cols=86  Identities=10%  Similarity=0.151  Sum_probs=60.7

Q ss_pred             hHHHHHHHHHHHH-HHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhh
Q 019292          210 IETWIFAMVALTC-VITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTS  288 (343)
Q Consensus       210 ~~~y~~l~~~~~~-~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~  288 (343)
                      +..+...++.-.+ .+.|. ..=++.+.---+...|+-+.+--+.+.+.|+++|+||...  .+...=.+++++++.|++
T Consensus        42 ~~~~~~~~lsG~~W~iGq~-~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~  118 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQI-GQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVI  118 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHH
Confidence            3444443333333 55555 3335667777788899999998899999999999999863  455555668889999999


Q ss_pred             hccccCCCCC
Q 019292          289 VLHSTREPDT  298 (343)
Q Consensus       289 lLs~~~~~~~  298 (343)
                      +-+.+++.++
T Consensus       119 lts~~~~~~~  128 (269)
T PF06800_consen  119 LTSYQDKKSD  128 (269)
T ss_pred             Hhcccccccc
Confidence            8776655554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=92.26  E-value=0.69  Score=45.37  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=58.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEe
Q 019292           51 PLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVL  122 (343)
Q Consensus        51 p~W~~G~~~~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~  122 (343)
                      +.-..|.. ..+|-+..-.|+..-|.+.+|-+-++..++++++++++.+|+.++..+.-.+.++.|+.+-..
T Consensus        85 ~llpl~~~-~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen   85 TLLPLGLV-FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             HHHHHHHH-HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            33334433 447777778899999999999999999999999999999999999999888888888765433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=92.22  E-value=0.29  Score=39.23  Aligned_cols=67  Identities=16%  Similarity=0.267  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhcc
Q 019292          218 VALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLH  291 (343)
Q Consensus       218 ~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs  291 (343)
                      ....+...-....++|+++-+++.+.++.+ ..+..+.+.+.++++|.-  ++.    ...|.++++.|++++.
T Consensus        59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~~----~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   59 LGLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERP--SWR----QIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHHH
Confidence            333433444557888999999999998887 789999999999999953  444    4456667777777653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=92.14  E-value=0.64  Score=42.40  Aligned_cols=115  Identities=18%  Similarity=0.245  Sum_probs=79.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-----C-------------C--CCCCC--CCcccc--cchhHHHHHHH
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGA-----N-------------G--ARAGS--GGYGYL--LEPLWWVGMFT   59 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~-----~-------------~--~r~~~--~~~~~l--~~p~W~~G~~~   59 (343)
                      +.+.|+...+.+.++.+..-+.|+|+.++.+.     +             +  .+++.  ...+.+  ..+.+|.-.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            45667777777777788888888887553210     0             0  00000  011111  12333333344


Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhhe
Q 019292           60 MIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGST  118 (343)
Q Consensus        60 ~~~g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~  118 (343)
                      ...|.++-...+.+++.....=...+..+++.+++.++.+|+++...|.|+.++..|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            56677777777888899999999999999999999999999999999999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=91.87  E-value=5  Score=38.82  Aligned_cols=78  Identities=13%  Similarity=0.215  Sum_probs=57.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-chhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCcc
Q 019292           51 PLWWVGMFTMIVGEIANFVAYIYA-PAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEE  128 (343)
Q Consensus        51 p~W~~G~~~~~~g~i~~~~Al~~a-p~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~~  128 (343)
                      +.|..=+.++-.-++.|=.|+.|. |.-+=.=+=+-+++.|+.++..++|+|-+.+++..++++.+|+++.-++..++.
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~  143 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDG  143 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcch
Confidence            345444555555566776677664 222222346778999999999999999999999999999999998877766554

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=91.37  E-value=1  Score=37.03  Aligned_cols=48  Identities=17%  Similarity=0.376  Sum_probs=39.7

Q ss_pred             hhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCc
Q 019292           79 VTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (343)
Q Consensus        79 V~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~  127 (343)
                      -+.-|.+-++.++.-....-|.+.++.||.|.+.|.+|+. ++.++|..
T Consensus        61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~-vil~~pR~  108 (109)
T COG1742          61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVA-VILFGPRG  108 (109)
T ss_pred             HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhcee-eeEeCCCC
Confidence            4556788888999999999999999999999999999954 55666643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=90.99  E-value=0.53  Score=44.77  Aligned_cols=122  Identities=18%  Similarity=0.170  Sum_probs=85.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC-----------------CCCCCcccccchhHHHHHHHHHH----
Q 019292            4 SNLIGFILAVVSSAFIGSSFIIKKKGLRKAGANGAR-----------------AGSGGYGYLLEPLWWVGMFTMIV----   62 (343)
Q Consensus         4 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r-----------------~~~~~~~~l~~p~W~~G~~~~~~----   62 (343)
                      -...|+.+|+.+..|-+.=.+.-||.-+..  ++.+                 ..+.+..++.-+.-..+...-++    
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhccc
Confidence            356799999999999887777766643211  1110                 01112233332333334433333    


Q ss_pred             HHHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCc
Q 019292           63 GEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (343)
Q Consensus        63 g~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~  127 (343)
                      =..+..+|+.-.|...-.-+.++.-.+.++.+..+|+|+++..+|+|+++++.++....+...++
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            34578999999999999999999999999999999999999999999999999987665544443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.71  E-value=19  Score=35.78  Aligned_cols=282  Identities=15%  Similarity=0.215  Sum_probs=144.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhhhh---------h-------hcc----CCCCCCCCCccccc----chhHHHH
Q 019292            1 MFSSNLIGFILAVVSSAFIGSSFIIKKKGLR---------K-------AGA----NGARAGSGGYGYLL----EPLWWVG   56 (343)
Q Consensus         1 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~---------~-------~~~----~~~r~~~~~~~~l~----~p~W~~G   56 (343)
                      |.+.-.+|++.-.+++++.+.-.+=.||-..         +       .|-    -.. +  +..++++    +-+|+.-
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~i-p--~~~~i~~~~~~~~l~~~~   77 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAI-P--DFFSIYSATPASTLFWTF   77 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhC-C--cHHHHHHhCChhHHHHHH
Confidence            5677888999999999998877766666211         0       000    000 0  1112221    1222222


Q ss_pred             HH--HHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhcc-------ccccchhhhHHHHhhhheeeEeecCC
Q 019292           57 MF--TMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNE-------KLQKMGMLGCLLCVVGSTMIVLHAPL  126 (343)
Q Consensus        57 ~~--~~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e-------~~~~~~~~G~~lii~G~~~vv~~ap~  126 (343)
                      ..  +-.+|.+..-.+..+.-.++-+.+. .++.++..++-..+.++       +-.....+|++++.+|++++...+..
T Consensus        78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence            11  1234444445555555555555432 23344444554444332       22334578999999999988776643


Q ss_pred             ccCcC--CHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhc---c------cCCCcchhHHHH----HHHhhhHHHHHHHH
Q 019292          127 EESLN--SVQEIWVLATQPAFLLYVGSVVAVALVLILYCA---P------RYGQTNILIYIG----ICSVIGSLTVMSVK  191 (343)
Q Consensus       127 ~~~~~--s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~---~------r~g~~~~l~y~~----i~gllg~~tvl~~K  191 (343)
                      .++..  +.+|.   --..+ +.-+.+..+.....-+-..   |      .+|...  .|..    +--+.||++.-+.=
T Consensus       158 Ke~~~~~~~~ef---n~~kG-l~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~--l~~~l~~~vvv~~GGf~tN~~y  231 (344)
T PF06379_consen  158 KEKELGEEAKEF---NFKKG-LIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNP--LYANLPVYVVVLWGGFITNLIY  231 (344)
T ss_pred             hhhhhccchhhh---hhhhh-HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCc--HHHhCchhhhhhhhHHHHHHHH
Confidence            32222  22331   11122 2212222222222111111   1      122211  1111    11256666666655


Q ss_pred             HHHHHHH-HHhc--Cccccchh---HHHHHHHHHHHHHHHHHHHHhHhhcccCc---ccccchhHhHHhHHHHHHHHHHh
Q 019292          192 AIGIAIK-LTLE--GLNQAKCI---ETWIFAMVALTCVITQLNYLNMALDTFNT---AVVSPIYYAMFTSFTIFASAIMF  262 (343)
Q Consensus       192 ~v~~~l~-~~~~--g~~~~~~~---~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a---~~v~P~~~v~~t~~~i~~g~i~f  262 (343)
                      ++-...+ .+.+  ++.....+   .-|++....-+.=..|..+.-.+=.+-.+   ...-++...+..+++-+.| +..
T Consensus       232 c~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG-l~l  310 (344)
T PF06379_consen  232 CLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG-LIL  310 (344)
T ss_pred             HHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH-HHH
Confidence            5544333 1121  12111122   22555555555557888888765543332   3455666666666666666 568


Q ss_pred             ccccCCCHHHHHHHHHHHHHHHHhhhhccc
Q 019292          263 KDYSGQSASSIASELCGFITVLSGTSVLHS  292 (343)
Q Consensus       263 ~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~  292 (343)
                      +||++.+......+.+|+++++..++++..
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            999999988888899999999988887643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.97  E-value=16  Score=33.84  Aligned_cols=63  Identities=21%  Similarity=0.231  Sum_probs=54.2

Q ss_pred             HHHHHHHHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCCc
Q 019292           64 EIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLE  127 (343)
Q Consensus        64 ~i~~~~Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~~  127 (343)
                      +-....|+--..++.++.+.+..-.|-.+++...||+|+...+++..++.+.|++++.. ++.|
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay-~DN~  129 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY-ADNE  129 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe-ccch
Confidence            34567788889999999999999999999999999999999999999999999876654 4444

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=89.84  E-value=1.9  Score=42.47  Aligned_cols=50  Identities=16%  Similarity=0.260  Sum_probs=38.9

Q ss_pred             HHhhcchhhhhcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhhee
Q 019292           70 AYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTM  119 (343)
Q Consensus        70 Al~~ap~slV~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~  119 (343)
                      ++.-.++.--+=.+.+.-++..+++.++++|+++..+++|+++++.|+.+
T Consensus       296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            34444444444455566678889999999999999999999999999864

>PRK02237 hypothetical protein; Provisional

Probab=88.28  E-value=2  Score=35.61  Aligned_cols=46  Identities=20%  Similarity=0.387  Sum_probs=38.8

Q ss_pred             hcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCC
Q 019292           80 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (343)
Q Consensus        80 ~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~  126 (343)
                      +.-|++-++.+.+-.+..-|+|.++.|++|.++|.+|+.++ .++|.
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence            44577888888899999999999999999999999998755 35554

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.24  E-value=0.61  Score=38.59  Aligned_cols=78  Identities=19%  Similarity=0.314  Sum_probs=63.7

Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccc-cchhhhHHHHhhhheee
Q 019292           43 GGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQ-KMGMLGCLLCVVGSTMI  120 (343)
Q Consensus        43 ~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~-~~~~~G~~lii~G~~~v  120 (343)
                      +.+..+.+...|+=+++---|+...+.-++-+|.++-.|.. ++++.++++++..+ +|+.. ++-++|+.+++.|+.+.
T Consensus        45 e~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   45 EMKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence            34566778888899999888999999999999999999985 67889999988664 66665 45578999999998765


Q ss_pred             E
Q 019292          121 V  121 (343)
Q Consensus       121 v  121 (343)
                      +
T Consensus       124 i  124 (125)
T KOG4831|consen  124 I  124 (125)
T ss_pred             e
Confidence            3

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=86.11  E-value=2.7  Score=35.11  Aligned_cols=73  Identities=12%  Similarity=0.165  Sum_probs=49.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHh
Q 019292          207 AKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSG  286 (343)
Q Consensus       207 ~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~G  286 (343)
                      +.+|+..+-.+.=..+.+    ...-.|.+.|-+..+|+.+..--+++.+.|..+.+|..+  +.    -..|+.+++.|
T Consensus        39 l~n~~y~ipf~lNq~GSv----~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~--~~----~~~G~~Li~~G  108 (113)
T PF10639_consen   39 LLNPKYIIPFLLNQSGSV----LFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS--RR----TWLGMALILAG  108 (113)
T ss_pred             HHhHHHHHHHHHHHHHHH----HHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc--hh----HHHHHHHHHcC
Confidence            445554443333333333    223368889999999999999889999999888777533  22    35788888888


Q ss_pred             hhh
Q 019292          287 TSV  289 (343)
Q Consensus       287 V~l  289 (343)
                      +.+
T Consensus       109 v~L  111 (113)
T PF10639_consen  109 VAL  111 (113)
T ss_pred             eee
Confidence            875

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=84.79  E-value=2  Score=40.85  Aligned_cols=223  Identities=14%  Similarity=0.171  Sum_probs=130.6

Q ss_pred             ccchhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccccch----hhhHHHHhhhhee
Q 019292           48 LLEPLWWVGMFT---MIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMG----MLGCLLCVVGSTM  119 (343)
Q Consensus        48 l~~p~W~~G~~~---~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~~~~----~~G~~lii~G~~~  119 (343)
                      +.-..|..|++.   -..|+..||-|..+...|.-.|+. +.+++-+.+++-+.+||=-+..+    .++.+++++|..+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            334567788765   346888899999999999999996 67899999999999999887655    3467788888877


Q ss_pred             eEeecCCccCcCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 019292          120 IVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKL  199 (343)
Q Consensus       120 vv~~ap~~~~~~s~~el~~~~~~p~fl~y~~v~~~~~~~Li~~~~~r~g~~~~l~y~~i~gllg~~tvl~~K~v~~~l~~  199 (343)
                      -..-.+.+.+..+++.+.+-..-   +.|..     .-...|.+.+|-    .        -+.+.++++-++++..+-.
T Consensus       134 Ts~~~~~nk~~~~~~n~kkgi~~---L~iSt-----~GYv~yvvl~~~----f--------~v~g~saiLPqAiGMv~~a  193 (288)
T COG4975         134 TSKQDRNNKEEENPSNLKKGIVI---LLIST-----LGYVGYVVLFQL----F--------DVDGLSAILPQAIGMVIGA  193 (288)
T ss_pred             eeeeccccccccChHhhhhheee---eeeec-----cceeeeEeeecc----c--------cccchhhhhHHHHHHHHHH
Confidence            66655544444455444321100   00000     000001111110    0        1556667777776654432


Q ss_pred             H---hcCccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHH
Q 019292          200 T---LEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASE  276 (343)
Q Consensus       200 ~---~~g~~~~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~  276 (343)
                      .   ....+-..+-.+|.-++..+.-+..-+.++=.+=+.+.++-.+ +-+. -.+.+.++|..+++|.+  +..++...
T Consensus       194 li~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FS-lSQl-gViisTiGGIl~L~ekK--tkkEm~~v  269 (288)
T COG4975         194 LILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFS-LSQL-GVIISTIGGILFLGEKK--TKKEMVYV  269 (288)
T ss_pred             HHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeee-Hhhh-eeeeeecceEEEEeccC--chhhhhhh
Confidence            2   1222345556666666555544433333332211222221100 0000 11235678999999965  57899999


Q ss_pred             HHHHHHHHHhhhhccccC
Q 019292          277 LCGFITVLSGTSVLHSTR  294 (343)
Q Consensus       277 ~~G~~~ii~GV~lLs~~~  294 (343)
                      ..|.++++.|..+|.--|
T Consensus       270 ~iGiilivvgai~lg~~K  287 (288)
T COG4975         270 IIGIILIVVGAILLGIAK  287 (288)
T ss_pred             hhhHHHHHHHhhhhheec
Confidence            999999999999887544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=81.66  E-value=43  Score=31.96  Aligned_cols=210  Identities=12%  Similarity=0.116  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhcch-hhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCC----ccCc
Q 019292           56 GMFTMIVGEIANFVAYIYAPAVLVTPLG-ALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL----EESL  130 (343)
Q Consensus        56 G~~~~~~g~i~~~~Al~~ap~slV~Plg-a~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~----~~~~  130 (343)
                      --+.+.+..+.+=-|+.+.|.-- |-+| +.--+--++++-.+.|.+-++++..-+.+|++|++++..--.+    |++.
T Consensus        91 cs~sYLlAMVssN~Alq~vpYPT-qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t  169 (337)
T KOG1580|consen   91 CSASYLLAMVSSNQALQYVPYPT-QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKT  169 (337)
T ss_pred             HHHHHHHHHHhccchhcccCCcH-HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccc
Confidence            33445566665555666666421 1011 0111223567777889999999999999999999888664222    2233


Q ss_pred             CCHHHHHHHhcChhHHHHHHHHHH-HHHHHHHHh--cccCCCcchhHHHHH-HHhhhHHHHHHHHHHHHHHHHHhcCccc
Q 019292          131 NSVQEIWVLATQPAFLLYVGSVVA-VALVLILYC--APRYGQTNILIYIGI-CSVIGSLTVMSVKAIGIAIKLTLEGLNQ  206 (343)
Q Consensus       131 ~s~~el~~~~~~p~fl~y~~v~~~-~~~~Li~~~--~~r~g~~~~l~y~~i-~gllg~~tvl~~K~v~~~l~~~~~g~~~  206 (343)
                      .-..|+...++         ...- ..-..-=++  +.+++..+++.|.-. +.+.=|...+++--.=+.+.      ..
T Consensus       170 ~g~GElLL~lS---------L~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y------F~  234 (337)
T KOG1580|consen  170 FGFGELLLILS---------LAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY------FV  234 (337)
T ss_pred             cchHHHHHHHH---------HHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHH------HH
Confidence            33345422110         0000 000000011  123344556665432 33333333333222111111      12


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHh
Q 019292          207 AKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSG  286 (343)
Q Consensus       207 ~~~~~~y~~l~~~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~G  286 (343)
                      -.||..|-=+....+|..+..+|.=+....|.+.. +.+.+..=-.++|++++++|+.  ..++.||++    .++++.|
T Consensus       235 ~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLt-CSivTTTRKfFTil~SVllf~n--pls~rQwlg----tvlVF~a  307 (337)
T KOG1580|consen  235 QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLT-CSIVTTTRKFFTILISVLLFNN--PLSGRQWLG----TVLVFSA  307 (337)
T ss_pred             HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCee-EEEEeehHHHHHHHHHHHHhcC--cCcHHHHHH----HHHHHHH
Confidence            34666654444444554444446667777776632 2333445567889999999997  446766654    4444444


Q ss_pred             hh
Q 019292          287 TS  288 (343)
Q Consensus       287 V~  288 (343)
                      ..
T Consensus       308 L~  309 (337)
T KOG1580|consen  308 LT  309 (337)
T ss_pred             hh
Confidence            33

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.70  E-value=1.8  Score=35.76  Aligned_cols=46  Identities=24%  Similarity=0.499  Sum_probs=38.6

Q ss_pred             hcchhhHHHHHHHHHHHHhccccccchhhhHHHHhhhheeeEeecCC
Q 019292           80 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPL  126 (343)
Q Consensus        80 ~Plga~~lv~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~ap~  126 (343)
                      +.-|++-++.+.+-.+.+-|+|.++.|++|..+|.+|+.++ .++|.
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI-~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII-LFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe-EecCC
Confidence            34567788899999999999999999999999999998765 44553

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.72
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.57
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.18
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.09

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.72  E-value=6.3e-08  Score=78.99  Aligned_cols=99  Identities=13%  Similarity=0.076  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHH
Q 019292           10 ILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSII   88 (343)
Q Consensus        10 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv   88 (343)
                      ++-+.+.++-..+....|++.      +         ..+.+.++.+...+.++..+...|+...|++.+.|+ .+++.+
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~------~---------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v   69 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSE------G---------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc------C---------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHH
Confidence            455667788888888888851      0         112355667778889999999999999999999999 899999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheeeEee
Q 019292           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (343)
Q Consensus        89 ~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~  123 (343)
                      ++.+++.+++||+++..+++|+++++.|++++-..
T Consensus        70 ~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999877543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.57  E-value=6.6e-08  Score=82.05  Aligned_cols=99  Identities=13%  Similarity=0.076  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhhHHH
Q 019292           10 ILAVVSSAFIGSSFIIKKKGLRKAGANGARAGSGGYGYLLEPLWWVGMFTMIVGEIANFVAYIYAPAVLVTPL-GALSII   88 (343)
Q Consensus        10 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~r~~~~~~~~l~~p~W~~G~~~~~~g~i~~~~Al~~ap~slV~Pl-ga~~lv   88 (343)
                      ++-+++.++-..|.++.|++.   .            ..+.+.++.|+++++++..+...++...|++.+.|+ .+++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~---g------------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE---G------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---c------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            345667788888888888862   1            012345578888899999999999999999999999 999999


Q ss_pred             HHHHHHHHHhccccccchhhhHHHHhhhheeeEee
Q 019292           89 VSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLH  123 (343)
Q Consensus        89 ~~~~la~~~l~e~~~~~~~~G~~lii~G~~~vv~~  123 (343)
                      ++.+++.+++||+++..+++|++++++|++++...
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999877543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.18  E-value=0.0051  Score=49.58  Aligned_cols=69  Identities=13%  Similarity=0.215  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccC
Q 019292          220 LTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTR  294 (343)
Q Consensus       220 ~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~  294 (343)
                      +++...-..++++++++.|.+.++|+....-++.+.+.|.++|+|.  .++.+    .+|..+++.||++++..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~--~s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR--LDLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHHHHHHhcCC
Confidence            3344444568888999999999999988889999999999999995  34544    578888999999997654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.09  E-value=0.0012  Score=55.75  Aligned_cols=70  Identities=13%  Similarity=0.207  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHhHhhcccCcccccchhHhHHhHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhhhhccccC
Q 019292          219 ALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTR  294 (343)
Q Consensus       219 ~~~~~l~Q~~~Ln~aL~~~~a~~v~P~~~v~~t~~~i~~g~i~f~E~~~~~~~~~~~~~~G~~~ii~GV~lLs~~~  294 (343)
                      .+++...-..++++++++.|.+..+|+....-++.+.+.|.++|+|..  ++.    ..+|.++++.||+++.+.+
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~l--s~~----~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLP----AIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHHHHHHHhcCC
Confidence            334444456688999999999999999878889999999999999954  343    3578888999999997654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00